BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493314
Length=3814
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15730.1 | Symbols: | CW-type Zinc Finger | chr4:8951533-89... 2739 0.0
> AT4G15730.1 | Symbols: | CW-type Zinc Finger | chr4:8951533-8957632
REVERSE LENGTH=3952
Length=3952
Score = 2739 bits (1483), Expect = 0.0
Identities = 1752/1879 (93%), Gaps = 30/1879 (2%)
Strand=Plus/Plus
Query 1939 AAAAACATGAAGCTGCCAGGAGAAACACTTAAGGCTACTCAGATGTCCACAGACCTTGGT 1998
|||||||||||||||||||||||||||| || ||||||||||| || |||||| |
Sbjct 2048 AAAAACATGAAGCTGCCAGGAGAAACACCTACTGCTACTCAGATATCTGCAGACC----T 2103
Query 1999 GTGTCGCACGATTTTGTTCAGGATAAGATTGACCAGAAAGCAAAGTGGCGAGCAGCAGGT 2058
| |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2104 -T-TCGCACGATTTTTTTCAGGATAAGATTGACCAGAAAGCAAAGAGGAGAGCAGCAGGT 2161
Query 2059 ACTGGTTGTCAGATAAAGATCAAGAAGAAAAAGGAGGCTGACAAAAAAGAAAGTGATGGT 2118
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 2162 GCTGGTTGTCAGATAAAGGTCAAGAAGAAAAAGGAGGCTGACAAAGAAGAAAGTGATGGT 2221
Query 2119 TCCAAGCATATCAAGACTGGTGATGGTACCAAACTCGCCAGAGGTGTTAAAGCAGAAGAA 2178
|||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||
Sbjct 2222 TCCAAGCATATCAAGACTGGTGATGGTAACAAACTTGCCAGAGTTATTAAAGCAGAAGAA 2281
Query 2179 ATACATTGGAATCAAGATCCGGAATGGACTCCAGCAGAGAGAAAAACAAAACGTCATGAC 2238
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 2282 ATACATTGGAATCAAGATCCTAAATGGACTCCAGCAGAGAGAAAAAGAAAACGTCATGAC 2341
Query 2239 AATGATTTTTACACTTTGGATGTAGAGCGAGACACAAAGAAAAGATTACTCGCATCTAAA 2298
|||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct 2342 AATGATTTTTGCACTTTGAATGTAGAGCGAGACCCAAAGAAAAGATTACTCGTATCTAAA 2401
Query 2299 AAGAAACCTGACCACAAACCTCAACTGACAACTGCTAGTGGTTCCTTGTGTACAAAATCT 2358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 2402 AAGAAACCTGACCACAAACCTCAACTGATAACTGCTAGTGGTTCCTTGTGTACAAAAGCC 2461
Query 2359 CATGGAAATATCAATAATCCTATGAGGAAAATAAGGTTGATGGGTAACAAGCAGGGTAAG 2418
|| ||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||
Sbjct 2462 CAGGGAAATATCAATAGTACTGTGAGGAAAATAAGGTTGATGGGTTACAAGCAGGGTAAG 2521
Query 2419 GATGGGAACAATTCAAAATTGTTTGCGGATGGTGAGGAAAAAGAGCCCTCAATGGAAATG 2478
|||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |
Sbjct 2522 GATGGGAAAAATTCAAAATTGTTTGCAGATGGTGAGGAAAACGAGCCCTCAATGGAAAAG 2581
Query 2479 GCGGTAACAACTAAGATTACAGTCCAGGAATCTAAAGCACACCaaaaaaaTGAATTGTTT 2538
|||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||
Sbjct 2582 GCGGTAACAACTAAGATTTCAGTCCATGAATCTAAAGCAAACCAAAGAAATGAATTGTTT 2641
Query 2539 CAGGCTGATGGTGATGGCTCTCAAGAA-TTCTGGAATGCTGATGCCTCATGTAGATACTT 2597
|||||||| | | ||| ||||||| || ||||| |||||||||||||||||| ||
Sbjct 2642 CAGGCTGA---T--T-GCTTTCAAGAACACCT-GAATGGTGATGCCTCATGTAGATATTT 2694
Query 2598 CTCTGGTGGAAGTGGGCAGATTTCTGGGGTAGAAACATCAAGCTCGTCGAAGGTTTTAGG 2657
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 2695 CTCTGGTGGAAGTGGGCAGATTTCTGGGATAGAAACATCAAACTCGTCGAAGGTTTTAGG 2754
Query 2658 ATCACATAAAAGTGGAAGAATGTATGTGGAAGAAGTAAAAGCATCCCCTGTGGAATCAGT 2717
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2755 ATCACATAAAAGTGGACGAATGTATGTGGAAGAAGTAAAAGCATCCCCTGTGGAATCAGT 2814
Query 2718 TTCCTCTTCCCCTGCAAGGTCTTCATGCCCCACAAATCTTGCTGCGAATGATATACTTCA 2777
||||||||||||||||||||||||||| ||| | | ||||||||||||||||
Sbjct 2815 TTCCTCTTCCCCTGCAAGGTCTTCATG-CCC-C--A--------CGAATGATATACTTCA 2862
Query 2778 AGAGGCTGAAAAGCTGAGAAAGCGTGCTGACTGTTTCAAGAGCTCTGGATCTGAATATCA 2837
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct 2863 AGAGGCTGAAAAGCTGAGAAAGCTTGCTGACTGTTTCAAGAGCTCTGGATTTGAATATGA 2922
Query 2838 ATACAAGGAGACCATCTTTAAAGCGGCTCTGAGGTTTCTCCTTGGAGCTTCAGTTTTAGA 2897
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2923 ATACAAGGAGATCAACTTTAAAGCGGCTCTGAGGTTTCTCCTTGGAGCTTCAGTTTTAGA 2982
Query 2898 AATGAGCAGTACTGATAGTGTGGAAGGGGGGAAGATGAGCCATATTGAGGCTTACCATTC 2957
|||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct 2983 AATGTGCAGTACAGATAATGTGGAAGTGGGGAAGATGAGCCATATTGAGGCTTACCATAC 3042
Query 2958 TGCTGCAAAACTTTCAGAAAGCTGTGCCCATCAATATGAAACAAGCCAAGAAATGGCTGC 3017
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3043 TGCTGCAAAACTTTCAGAAAGTTGTGCCCATCAATATGAAACAAGCCAAGAAATGGCTGC 3102
Query 3018 AGCTGCTTTGGCCTATAAGTGCACAGAAGTGGCTTGCATGAGATTAGTGTATGGCAGAAG 3077
|||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3103 AGCTACTTTGGCTTATAAATGCACAGAAGTGGCTTGCATGAGATTAGTGTATGGCAGAAG 3162
Query 3078 TCTAGGTCTGAGTGGAGAATGGAATGAATTGCAAAAAATGGTACAGATGACTCCTCAAGG 3137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3163 TCTAGGTCTGAGTGGAGAATGGAATGAATTGCAAAAAATGGTACAGATGACTCCTCAAGG 3222
Query 3138 TGAATCACCGTCATCATCCGCATCTGATGTCGATAGTCTCAATCATCAAGGGGTGGTTGA 3197
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || |
Sbjct 3223 TGAATCACCGTCATCATCTGCATCTGATGTCGATAGTTTCAATCATCAAGGGGTGATTAA 3282
Query 3198 TAAGTCTGCTAAAACCAAAAGAGGTCTTTCCCATGTTGCTGGAAATCTTCTTCCTTTTGC 3257
|||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| ||||
Sbjct 3283 GAAGTCTGCTAAAACCAGAAGAGGTCTTTCCCATGTTGCCGGAAACCTTCTCCCTGTTGC 3342
Query 3258 TAGAAGCCAACTAAATTTTGTTCCGTTATTGGACTTTAC-GGAGAGCATGAATCTGGCAA 3316
||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct 3343 TAGAAGCCAACTAAATTTTGTTCCGCTATTGGACTTTACAGG-GAGCATGAATCTGGCAA 3401
Query 3317 TGGAAGCCTCAGCAAAATCCCAAAATGCTTTTAAAGCAGTCACTGTCACCTCAGAAGAAA 3376
|||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 3402 TGGAGGCCTCAGCAAAATCCCAAAATGCTTTTAAAGCCGTCACTGACACCTCAGAAGAAA 3461
Query 3377 CAAAGCATGGAGACTGTATCTCTGCTATCAAGAAAGTTGTCGATTTTAGTTTCCATGATG 3436
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3462 GAAAGCATGGAGACTGTATCTCTGCTATCAAAAAAGTTGTCGATTTTAGTTTCCATGATG 3521
Query 3437 TGGAAGCACTTGTAAAGATGATTGAGGTTGCCATGGATGCTCTACGTTCATCAAGATTCG 3496
| ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3522 TTGAAGCGCTTATAAAGATGATTGAGGTTGCCATGGATGCTCTAAGTTCATCAAGATTCG 3581
Query 3497 GCGGCCCAAAGTGTTGACTCTATTTTGTACATAGGTTCTGGTCCTATAAAGAATAGAATA 3556
| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 3582 GTGGCCCAAAGTGTTGACTCTATTTTGTATATAGACCCTGGTCCTATAAAGAATAGAATA 3641
Query 3557 GTGTTTCATGAACTTCCATAGAAAAATCTTATTAATTAGCATAGATTAGGAAAGGAAGAC 3616
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 3642 GTGTTTCATGAACTTCCATAGAAAAATCTTAGTAAGTAGCATAGATTAGGAAAGGAAGAC 3701
Query 3617 TTGGAAAGAGGACACTAGATAAGGTCTAAGTTTGC-ACTTTGCAGTAACTCTCAGGGTCC 3675
||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 3702 TTGGAGAGAGGACACTAGATAAGGTCTAAGTTTGCTA-TTTGCAGTAACTCTCAGGGTCC 3760
Query 3676 TGTTTCAGGTCTTTCTTCTTTTTGGTGTCCGGGTATTCAAGATTAACAAAAGAATATTTA 3735
||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||
Sbjct 3761 TGTTTCAGGTCTTTCTTCTTTTTGGTGTCTGGGTATTCAATATTAACTAAAGCATATTTA 3820
Query 3736 TAGAAGAGTAGCAGGATTCTTAGATATAGTCATTTAAAAGATTGGTTAGTGATAAGAGTT 3795
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 3821 TAGAAGAGTAGGAGGATTCTTAGATATAGTCATTTAAAAGATCGGTTAGTGATAAGATTT 3880
Query 3796 GTGACAAGACACTGCTCTA 3814
||||||||||||||||||
Sbjct 3881 CTGACAAGACACTGCTCTA 3899
Score = 1463 bits (792), Expect = 0.0
Identities = 925/988 (94%), Gaps = 14/988 (1%)
Strand=Plus/Plus
Query 1 GTCTGCAGAAAAATTCGGAGACGCAAAAGCAACTTGCCGCCGAATCTTCCTTAAA-CCTC 59
||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1 GTCTGCAAAAAAAATCGGAGACGCAAAACCAACTTGCCGCCGAATCTTCCTTAAACCCTC 60
Query 60 GACGCCGCACTTCGCCGCCG-TGACTCGATCACAGTGATCGAATCTTCCTTTTAAACTAT 118
|||| || ||||||||||| ||| ||||||||||||||||||||||||||| |||| |
Sbjct 61 AACGCTGCTCTTCGCCGCCGTTGAGACGATCACAGTGATCGAATCTTCCTTTTCAACTTT 120
Query 119 CTCGTTC-TTTGATCAAACGAGTTTGGTTGAGTTTGTGATAAACGTGATTAAGCGATTGA 177
|||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 121 CTCG-TCTTTTGATCAAACGAGTTTGGTTGAGTTTTTGATAAACGTGATTAAGCGATTAA 179
Query 178 TTTCGCGTTTTTAA-AACAATCAATATTGT-GTTTGGAGATTGAACAAATTTAGGGTTTT 235
||||||| |||||| ||||||| | ||||| |||||||||||||||||||||||| |||
Sbjct 180 TTTCGCG-TTTTAACAACAATCTAGATTGTCCTTTGGAGATTGAACAAATTTAGGG-TTT 237
Query 236 TTGAGGATAATCTAAGTGTTTATGATTTGAATCTTTGTGTGTTTTGAGA---TTCTGGGC 292
||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 238 TTGGGGATAATCTAAGTGTTTATGATTTGAAACTTTGTGTGTTTTGAGATTGTTTTGGGC 297
Query 293 AATGTTGGATTTTCGAGACGGTTTGGTGGCGGCAGAGTTCGTGTGTGTTGGGGTTTAGGA 352
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 298 AATGTTGGATTTTCGAGACGGTTTGGTGGCGGCAGAGTTAGTGAGTGTTGGGGTTTAGGA 357
Query 353 GGTAGTAGTAGTAATTAGGGTTTGGACTTGGGTTATGTTTAGGGTTTTTA-TAGTTTTAC 411
||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||
Sbjct 358 AGTAGTAGTAGTTATTAGGGTTTGGAATTGGGTTATGTTTAGGG-TTTTACTAG-TTTAG 415
Query 412 AAGATGGGAGAGGATTATGAACTTGAAGAAGGAGAGATGAATTGTTCTTCTGATGAAGCT 471
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 416 AAGATGGGAGAGGATTATGAGCTTGAAGAAGGAGAGATGAATTGTTCTTCTGATGAAGCT 475
Query 472 GTTGTTGATCTTGACGTTGATCTCTCTTACATTGACAAGAAGGTGCAGAATGTACTTGGC 531
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 476 GTTGTTGATCTTGACGTTGATCTCTCTTACATTGACAAGAAGGTACAGAATGTACTTGGC 535
Query 532 CACTTGCAAAAAGATTTTGGAGAGGGAGCCCTGGACCAGTTTGGTCCGAAGATCTGTGAC 591
||||||||||||| ||| ||||||| ||||| ||||| |||||||||| |||||| ||||
Sbjct 536 CACTTGCAAAAAGGTTTCGGAGAGGAAGCCCGGGACCGGTTTGGTCCGGAGATCTTTGAC 595
Query 592 TATGGATCATTTTTGCCCACATACAAACGTTCGGTGGCTGTACCATCATGTCAAAGGAGT 651
|||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct 596 TATGGATCATTTTTGCCCACTTACAAACGTTTGCCGGCTGTACCATCATGTCAAAGGAGT 655
Query 652 TCCCTAGGGAATCATGCTGTACAAAGAATTTCCAACAGTTTACCCGGGAAGAATGTGGTT 711
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 TCTCTAGGGAATCATGCTGTACAAAGAATTTCCAACAGTTTACCCGGGAAGAATGTGGTT 715
Query 712 CAAAAGTTTCAGTCACTCCCTGCTACATCTTCTGAACTAGTAAGAAATCGGGATCCTCAG 771
|| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 716 CAGAAGTTTCAGTCACCCCCTGCTACATCTTGTAAACTAGTAAGAAATCAGGATCCTCAG 775
Query 772 AACTATCAAACTTCAGGATCTCTTTTGGCTCAAGCTCCAGGAAAAGTTCCCATAAATAAA 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 AACTATCAAACTTCAGGATCTCTTTTGGCTCAAGCTCCAGGAAAAGTTCCCATAAATAAA 835
Query 832 GGAAATGCAAGAACACCAGCAAATGATTTGCCTGATCATAAGCCGATTAGAGTTCGGATC 891
|||||||||||||||||||| |||||||||||| || |||||||||| ||||||||||||
Sbjct 836 GGAAATGCAAGAACACCAGCCAATGATTTGCCTCATAATAAGCCGATCAGAGTTCGGATC 895
Query 892 AAAATGGGTTCTGAAATCTTGTCCCAAAGTGTCACGATGGTTTGTAAGGATCTTGGTCTC 951
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 896 AAAATGGGTTCTGAAATCTTGTCCCAAAGTGTCGCGATGGTTTGCAAGGATCTTGGTCTC 955
Query 952 GATGGTTCTCCAAATTCACCACCCCGAA 979
||||||||||||||||||||||||||||
Sbjct 956 GATGGTTCTCCAAATTCACCACCCCGAA 983
Score = 1406 bits (761), Expect = 0.0
Identities = 911/981 (93%), Gaps = 19/981 (2%)
Strand=Plus/Plus
Query 983 ATACATCTCTGGGGAAGACAAGTGAATCTCCTTCCCGCATTCTTCGGGAAATGACTGCCA 1042
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1017 ATACATCTCTAGGGAAGACAAGTGAATCTCCTTCCCGCATTCTTCAGGAAATGACTGCCA 1076
Query 1043 TTTCTGTTCCAGAGGATCTACTGATGTCGCCTCTTCCTGATAGTCTGCTTCTTGTGAAGA 1102
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1077 TTTCTGTTCCAGAGGATCTACTGATGTCGCCTCTTCCTGATAGTCTGCTCCTAGTGAAGG 1136
Query 1103 ATAAGGAGAAGCGATATACTTTATTAGACAATCAACCTGTGATTAAGACAGGAAAGGAAC 1162
||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1137 ATAAGAAGAAGCAATATACTTTATTAGACAATCAACCTATGATTAAGACAGGAAAGAAAT 1196
Query 1163 CTTCTATTCAGACACAGAACAAGTTTTCGGATGCTTTGTGTTGTGAGAAAACTCCAATTG 1222
|||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||
Sbjct 1197 CTTCTATTCAGATACAGAACAAGTTCTCGGATGTTTTATGTTGTGAGAAAACTCCAATTG 1256
Query 1223 GAAGGAGAAGGAAAGAGGCAGACTGCTTTGATGCCACCACTTGGAATGAGACGAAGAAGC 1282
|||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1257 GAAGGAGAAGGAAAGAGGTAGACTGTTTTCATGCCACCACTTGGAATGAGACGAAGAAGC 1316
Query 1283 AAAAAGTTTTTTCCACTGGTCAGCGAGCCAGGGATAACTCAGCTTGTGGTTTAGGTGGGG 1342
| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1317 ATAAAGTTTTATCCACTGGTCAGCTAGCCAGGGATAACTCAGCTTGTGGTTTAGGTGGGG 1376
Query 1343 CAAGT-TT--TAC---------T---ACAAAAAGTAACTTGCAGGAAGGTTGTAGAAAAG 1387
||||| || ||| | ||||||||||||||||||||||||||||||||||
Sbjct 1377 CAAGTCTTACTACTGATGGGTTTACAACAAAAAGTAACTTGCAGGAAGGTTGTAGAAAAG 1436
Query 1388 ATGGAGAAAGTGATCCCAGAGTCGCAAATAAAATAAAGTTTGTTGGGTTGCATGCTGTGA 1447
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 ATGGTGAAAGTGATCCCAGAGTCGCAAATAAAATAAAGTTTGTTGGGTTGCATGCTGTGA 1496
Query 1448 AGGAGAAAAAGACATGTCCGACAAAGTTGCAACAGAACAGTAGCAAAAATCGTTTTGGTG 1507
| |||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 1497 AAGAGAAAAAAACATGTCCGACAAAGTTGCAACAGAACCGTAGCAAATATCGTATTGGTG 1556
Query 1508 ATAAATTTTTATCAAATATGCC-TTGCAAGGATGCCACATATGTAGGTCACAATAGCATG 1566
||||| |||||||||| ||||| ||| ||||||||| ||||| |||||||||||||||||
Sbjct 1557 ATAAAGTTTTATCAAAGATGCCTTTG-AAGGATGCCGCATATATAGGTCACAATAGCATG 1615
Query 1567 GACATTAAGTTTGATTTTCCGGTTGCAACTTCTTCCACCAGTGTTGACGTAGATAATTGG 1626
|||| | |||||||||| |||||||| |||||||||||||||||||| ||||| |||||
Sbjct 1616 GACACTGGGTTTGATTTTGCGGTTGCACCTTCTTCCACCAGTGTTGACCTAGATTATTGG 1675
Query 1627 GCCCAATGTGAGAGTTGTGAGACATGGCGGCTATTGCCCTATGGCCTGAATATTGAGCAG 1686
|||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct 1676 GCCCAATGTGAGAGTTGTGAGAAATGGCGGCTACTGCCCTATGACCTGAATACTGAGAAG 1735
Query 1687 CTGCCTGATAAGTGGTTGTGTAGCATGCAAACCTGGCTGCCTGGAATGAACCACTGTGGC 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 CTGCCTGATAAGTGGTTGTGTAGCATGCAAACCTGGCTGCCTGGAATGAACCACTGTGGC 1795
Query 1747 GTCAGCAAGGAAGAGACTATAAACGCAATTAAATCCTATCATGCTAGTGAGGGTCATGGT 1806
|||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1796 GTCAGCGAGGAAGAGACTACAAACGCAATTAAATCCTTTCATGCTAGTGAGGGTCATGGT 1855
Query 1807 CCTGTCACTGGTGTTAAACTCCTCTCTGATGTTAGTAATGCTGATAAAAGCTACCAACCT 1866
|||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1856 CCTGACACTGGTGTTAAACTCCTCTCTGATGTTCGTAATGCTGATAAAATCTACCAACCT 1915
Query 1867 TTAACTTCTGGTTCATTGCCTAATCCAATTGAAAAGAAGTCTAACGTCA-AAGACTTATC 1925
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1916 TTAACTTCTGGTTCATTGCCTAATCCAATTGAAAAGAAGTCTAACGT-AGAAGACTTATC 1974
Query 1926 ACAAGGAGTTTCAAAAAACAT 1946
||||||||||||| |||||
Sbjct 1975 GCAAGGAGTTTCAAGCAACAT 1995
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 189982213141
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5