BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493342
Length=1487
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15480.1 | Symbols: UGT84A1 | UDP-Glycosyltransferase superf... 2191 0.0
AT1G05675.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 65.8 1e-09
> AT4G15480.1 | Symbols: UGT84A1 | UDP-Glycosyltransferase superfamily
protein | chr4:8848801-8850516 REVERSE LENGTH=1716
Length=1716
Score = 2191 bits (1186), Expect = 0.0
Identities = 1389/1489 (93%), Gaps = 6/1489 (0%)
Strand=Plus/Plus
Query 2 AAAAAATGGGATCCATCTCAGAAATGGTGTTCGAAACTTGTCCATCTCCAAACCCAGTTC 61
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 40 AAAAAATGGGATCCATATCAGAAATGGTGTTCGAAACTTGTCCATCTCCAAACCCAATTC 99
Query 62 ATGTAATGCTAGTGTCGTTTCAAGGACAAGGCCACGTGAACCCTCTTCTTCGTCTTGGCA 121
|||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 100 ATGTAATGCTCGTCTCGTTTCAAGGACAAGGCCACGTCAACCCTCTTCTTCGTCTCGGCA 159
Query 122 AGCTCATTGCTTCAAAGGGTTTACTCGTTACCTTCGTTACAACGGAGCTTTGGGGCAAGA 181
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 160 AGTTAATTGCTTCAAAGGGTTTACTCGTTACCTTCGTTACAACGGAGCTTTGGGGCAAGA 219
Query 182 AAATGAGACAAGCCAACAAGATCGTTGATGGTGAGCTTAAACCGGTTGGTTCCGGTTCAA 241
||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||
Sbjct 220 AAATGAGACAAGCCAACAAAATCGTTGACGGTGAACTTAAACCGGTTGGTTCCGGTTCAA 279
Query 242 TCCGGTTTGAGTTCTTTGATGAAGAATGGGCAGATGACGATGACCGGAGAGCTGATTTCT 301
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 280 TCCGGTTTGAGTTCTTTGATGAAGAATGGGCAGAGGATGATGACCGGAGAGCTGATTTCT 339
Query 302 CTTTGTACATTTCACACCTAGAGAGCATTGGGATACGAGAAGTGTCGAAACTTGTGAGAA 361
||||||||||| | |||||||||||| ||||||||||||||||||| || ||||||||||
Sbjct 340 CTTTGTACATTGCTCACCTAGAGAGCGTTGGGATACGAGAAGTGTCTAAGCTTGTGAGAA 399
Query 362 GATACGAGGAAGCTAACGAGCCTGTCTCGTGTCTGATTAATAATCCGTTTATTCCATGGG 421
||||||||||||| |||||||||||||||||||| || ||||| |||||||| |||||||
Sbjct 400 GATACGAGGAAGCGAACGAGCCTGTCTCGTGTCTTATCAATAACCCGTTTATCCCATGGG 459
Query 422 TCTGCCACGTGGCGGAAGAGTTCAACATTCCTTGTGCGGTTCTTTGGGTTCAGTCTTGTG 481
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 460 TCTGCCACGTGGCGGAAGAGTTCAACATTCCTTGTGCGGTTCTCTGGGTTCAGTCTTGTG 519
Query 482 CTTGTTTCTCTGCTTATTACCATTACCAAGATGGCTCTGTTTCTTTCCCGACGGAAACAG 541
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 520 CTTGTTTCTCTGCTTATTACCATTACCAAGATGGCTCTGTTTCATTCCCTACGGAAACAG 579
Query 542 AGCCTGACCTCGATGTTAAGCTTCCTTGTGTTCCTGTCTTGAAGCACGACGAGATTCCTA 601
||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 580 AGCCTGAGCTCGATGTGAAGCTTCCTTGTGTTCCTGTCTTGAAGAACGACGAGATTCCTA 639
Query 602 GCTTTCTCCATCCTTCTACTCCGTTCGCCGGTTTACGAGAAGCCATTCTTGGACAATTCA 661
||||||||||||||||| || |||| | ||||| ||| |||| |||||||| |||||||
Sbjct 640 GCTTTCTCCATCCTTCTTCTAGGTTCACGGGTTTTCGACAAGCGATTCTTGGGCAATTCA 699
Query 662 AGAATCTGAGAAAGTCCTTCTGTGTTTTAATCGATTCTTTCGACGCATTGGAGCAAGAAG 721
|||||||||| ||||||||||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct 700 AGAATCTGAGCAAGTCCTTCTGTGTTCTAATCGATTCTTTTGACTCATTGGAACAAGAAG 759
Query 722 TGATTGATTACATGTCAAGGCTTTGTCCGGTTAAAACCGTTGGACCGCTTTTCAAAGTGG 781
| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 760 TTATCGATTACATGTCAAGTCTTTGTCCGGTTAAAACCGTTGGACCGCTTTTCAAAGTTG 819
Query 782 CT-GAAACCGTTACTTCCAACGTAAGTGGTGACATTTGCAAACCGACGGATAAATGCCTC 840
|| | | | |||||||| ||||||| ||||||||||||||| | || ||||||||||||
Sbjct 820 CTAGGA-CAGTTACTTCTGACGTAAGCGGTGACATTTGCAAATCAACAGATAAATGCCTC 878
Query 841 GAGTGGTTAGACTCGAGGCCTAAATCGTCCGTTGTCTACATTTCGTTCGGGACAGTTGCG 900
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 879 GAGTGGTTAGACTCGAGGCCTAAATCGTCAGTTGTCTACATTTCGTTCGGGACAGTTGCA 938
Query 901 TATTTGAAGCAAGAACAGATCGATGAGATCGCAT-ATGGAGTTTTGAAATCGGGTTTATC 959
||||||||||||||||||||||| |||||||| | | ||||||||||| |||||||||||
Sbjct 939 TATTTGAAGCAAGAACAGATCGAAGAGATCGC-TCACGGAGTTTTGAAGTCGGGTTTATC 997
Query 960 GTTCTTGTGGGTGATTAGACCTCCACCGCACGATCTAAAGGTCGAGACACATGTCTTGCC 1019
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 998 GTTCTTGTGGGTGATTAGACCTCCACCACACGATCTGAAGGTCGAGACACATGTCTTGCC 1057
Query 1020 TCAAGAACTTAAAGAGAGTAGTGATAAAGGTAATGGGATGATTGTGGATTGGTGTCCACA 1079
||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||
Sbjct 1058 TCAAGAACTTAAAGAGAGTAGTGCTAAAGGTAAAGGGATGATTGTGGATTGGTGCCCACA 1117
Query 1080 AGAGAAAGTCTTGGGTCATCCTTCAGTGGCATGTTTCGTGACACATTGTGGATGGAACTC 1139
|||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1118 AGAGCAAGTCTTGTCTCATCCTTCAGTGGCATGCTTCGTGACTCATTGTGGATGGAACTC 1177
Query 1140 GACGATGGAGTCTTTGTCTTCGGGTGTTCCGGTGGTTTGTTGTCCGCAATGGGGAGATCA 1199
||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1178 GACAATGGAATCTTTGTCTTCAGGTGTTCCGGTGGTTTGTTGTCCGCAATGGGGAGATCA 1237
Query 1200 AGTGACTGACGCGGTGTATTTGATCGATGTTTTTAAGACCGGAGTTAGACTAGGCCGTGG 1259
||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1238 AGTGACTGATGCAGTGTATTTGATCGATGTTTTCAAGACCGGGGTTAGACTAGGCCGTGG 1297
Query 1260 AGCGGCAGAGGAGAGGGTTGTGCCAAGGGAGGAAGTGGCGGAGAAGCTTTTGGAAGCGAC 1319
|||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 AGCGACCGAGGAGAGGGTAGTGCCAAGGGAGGAAGTGGCGGAGAAGCTTTTGGAAGCGAC 1357
Query 1320 AATTGGGGAGAAGGCAGAGGAGTTGAGGAAGAATGCTTTGAAATGGAAGGCGGAGGCGGA 1379
| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1358 AGTTGGGGAGAAGGCAGAGGAGTTGAGAAAGAACGCTTTGAAATGGAAGGCGGAGGCGGA 1417
Query 1380 AGCAGCGGTGGCTCCCGGTGGTTCGTCGGATAAGAATTTTAGGGAGTTTGTGGAGAAGTT 1439
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 AGCAGCGGTGGCTCCAGGAGGTTCGTCGGATAAGAATTTTAGGGAGTTTGTGGAGAAGTT 1477
Query 1440 AGG-GATGGGAGTATCGAAGGTTAAGGAGAACGGACACTAGGCTAAAGT 1487
||| | ||||||| ||||| ||| || || ||| ||||||| |||||
Sbjct 1478 AGGTGC-GGGAGTAACGAAGACTAAAGATAATGGATACTAGGCAAAAGT 1525
> AT1G05675.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:1701116-1702749 REVERSE LENGTH=1493
Length=1493
Score = 65.8 bits (35), Expect = 1e-09
Identities = 72/90 (80%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 1111 TGTTTCGTGACACATTGTGGATGGAACTCGACGATGGAGTCTTTGTCTTCGGGTGTTCCG 1170
||||||||||||||||||||||||||||||||| | ||| ||| || ||| |||||
Sbjct 1067 TGTTTCGTGACACATTGTGGATGGAACTCGACGTTAGAGGGATTGAGTTTGGGAGTTCCA 1126
Query 1171 GTGGTTTGT-TGTCCGCAATGGGGAGATCA 1199
|| || || || || || |||| ||||||
Sbjct 1127 ATGATTGGTATG-CCTCATTGGGCAGATCA 1155
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73342996245
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5