BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493374 Length=1353 Score E Sequences producing significant alignments: (Bits) Value AT4G15160.1 | Symbols: | Bifunctional inhibitor/lipid-transfer... 686 0.0 AT4G15165.1 | Symbols: | N-terminal nucleophile aminohydrolase... 364 9e-100 AT3G22110.1 | Symbols: PAC1 | 20S proteasome alpha subunit C1 |... 159 5e-38 > AT4G15160.1 | Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:8646150-8647252 FORWARD LENGTH=1103 Length=1103 Score = 686 bits (371), Expect = 0.0 Identities = 518/586 (88%), Gaps = 21/586 (4%) Strand=Plus/Plus Query 181 CCAAAACCTCCCACCGTGAAG---CCTCCACCTCCATAC---ATTCCATGC-CCTCCTCC 233 ||||||||||| ||||||||| || |||||||| ||| | ||| | || ||||| Sbjct 286 CCAAAACCTCCAACCGTGAAGCCACCACCACCTCCCTACGTGAAGCCA-CCACCACCTCC 344 Query 234 C-CCGT--ATTCTCCAAAACCTCc-cacggtgaagccaccaccaccaccaaccgtgaagc 289 | | || | | ||| |||||| || ||||||||||||||||| || |||||||||| Sbjct 345 CACTGTGAAGCCACCACCACCTCCTTAC-GTGAAGCCACCACCACCCCCTACCGTGAAGC 403 Query 290 caccaccacctcccaccg-tgaagccaccaccaccacccacgccgtatactccaccacca 348 |||||||||| |||| || | | | |||||||||||||||||||||||||| |||||| Sbjct 404 CACCACCACCACCCA-CGCCGTATACTCCACCACCACCCACGCCGTATACTCCTCCACCA 462 Query 349 cccaccgtgaagccaccaccaccaccaccagtcgttaccccgccaccgccaacaccaacc 408 ||||| |||||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 463 CCCACGGTGAAG---CCACCACCACCACCGGTCGTTACCCCACCACCGCCAACACCAACC 519 Query 409 ccaGAGGCGCCATGCCCGCCACCTCCACCAACCCCATATCCTCCTCCGCCTAAACCAGAG 468 |||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| || Sbjct 520 CCAGAGGCGCCATGTCCGCCACCACCACCAACACCATATCCTCCTCCGCCTAAACCGGAA 579 Query 469 ACTTGTCCCATCGACGCTCTGAAACTAGGCGCGTGTGTGGACGTCCTAGGCGGTTTGATT 528 |||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct 580 ACTTGTCCAATCGACGCACTGAAACTAGGCGCATGTGTGGACGTGCTAGGCGGTTTGATT 639 Query 529 CACATCGGACTAGGGAAAAGCTACGCTAAGGCTAAGTGTTGCCCACTTCTTGAGGGTTTA 588 |||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||| Sbjct 640 CACATCGGACTAGGGAAAAGCTACGCTAAGGCAAAGTGTTGCCCACTTCTTGACGACTTA 699 Query 589 GTGGGTGTTGACGCTGCGGTTTGTCTCTGCACCACCATTAGAGCGAAGCTTCTCAACATT 648 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 700 GTGGGTCTTGACGCGGCGGTTTGTCTCTGCACCACCATTAGAGCGAAGCTTCTCAACATT 759 Query 649 GACCTCATTATTCCAATTGCTCTTGAGCTTCTTGTCGACTGTGGTAAGACTCC---ACCT 705 ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||| Sbjct 760 GACCTCATTATCCCAATTGCTCTAGAGGTTCTTGTCGACTGTGGTAAGACTCCTCCACCT 819 Query 706 CGTGGCTTCAAGTGTCCTGCTCCGCTCAAAAGGACTCCTTTCTTGG 751 |||||||||||||||||| ||||||| |||||||||||| |||||| Sbjct 820 CGTGGCTTCAAGTGTCCTACTCCGCTAAAAAGGACTCCTCTCTTGG 865 Score = 525 bits (284), Expect = 4e-148 Identities = 348/378 (92%), Gaps = 8/378 (2%) Strand=Plus/Plus Query 1 ATGGGGCTTCTTCACAAGCAAAACCTCTCCTTTGTGATACTACTCCTCCTCGGTCTCCTC 60 |||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| Sbjct 43 ATGGCGCTTCTTCACAAGCAAAACATTTCCTTTGTGATACTCCTCCTCCTCGGTCTCCTT 102 Query 61 GCCGTCTCTTATGCTTGTGATTGTAGTGACCCTCCTAAACCATCTCCACACCCTGTTAAA 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 103 GCCGTCTCTTATGCTTGTGATTGTAGTGACCCTCCTAAACCATCACCACACCCTGTTAAA 162 Query 121 CCGCCAAAACATCCCGCTAAACCACCTAAGCCCCCCACCGTTAAACCACCTACTCACACC 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 163 CCGCCAAAACATCCCGCTAAACCACCTAAGCCCCCTACCGTTAAACCACCTACTCACACC 222 Query 181 CCAAAACCTCCCACCGTGAAGCCTCCACCTCCATACATTCCATGCCCTCCTCC-CCCGTA 239 ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| || Sbjct 223 CCAAAGCCTCCCACTGTGAAGCCTCCACCTCCATACATTCCATGCCCTCCTCCGCCC-TA 281 Query 240 TTCTCCAAAACCTCccacggtgaagccaccaccaccacca-accgtgaagccaccaccac 298 | ||||||||||||| || ||||||||||||||||| || || |||||||||||||||| Sbjct 282 TACTCCAAAACCTCCAACCGTGAAGCCACCACCACCTCCCTAC-GTGAAGCCACCACCAC 340 Query 299 ctcccaccgtgaagccaccaccaccaccc-acgccgtatactccaccaccaccc-accgt 356 ||||||| ||||||||||||||||| || ||| | | | |||||||| ||| ||||| Sbjct 341 CTCCCACTGTGAAGCCACCACCACCTCCTTACGT-GAAGCCACCACCACC-CCCTACCGT 398 Query 357 gaagccaccaccaccacc 374 |||||||||||||||||| Sbjct 399 GAAGCCACCACCACCACC 416 > AT4G15165.1 | Symbols: | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr4:8648832-8650382 FORWARD LENGTH=908 Length=908 Score = 364 bits (197), Expect = 9e-100 Identities = 219/230 (95%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 1124 GCTGGGACAAGAACCACGGGTTTCAGCTGTATATGAGTGACCCAAGCGGAAACTATGGTG 1183 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 398 GCTGGGACAGGAACCACGGGTTTCAGCTGTATATGAGTGACCCAAGTGGAAACTATGGTG 457 Query 1184 GATGGAAAGCTGCAGCCGTTGGAGCAAATAATCAAGCGGCTCAGTCTATTCTTAAGCAAG 1243 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 458 GATGGCAAGCTGCAGCTGTTGGAGCAAATAATCAAGCGGCTCAGTCTATTCTTAAGCAAG 517 Query 1244 ACTATAAGGATGATGCAACAAGAGAAGAGGTGGTTCAGCTCGCTATCAAGGTTTTGAGCA 1303 ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct 518 ACTATAAGGATGATGCAACGAGGGAAGAAGTGGTTCAGCTCGCTATCAAGGTTTTGAGCA 577 Query 1304 AGACAATGGACAGCACGAGCTTGACAGCTGAGAAGCTCGAGCTTGCGGAG 1353 |||| |||||||||||||||||||||||||| || ||||||||||| ||| Sbjct 578 AGACGATGGACAGCACGAGCTTGACAGCTGAAAAACTCGAGCTTGCTGAG 627 Score = 222 bits (120), Expect = 6e-57 Identities = 145/157 (92%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 969 AGCTATTGGCAATGCTGGTTCTGCGATTGGAATCTTGGCAAAAGATGGAGTTGTGTTGGT 1028 |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct 189 AGCTATTGGCAATGCTGGTTCTGCCATTGGAATCTTGGCAAAAGACGGAGTGGTGTTGGT 248 Query 1029 TGGTGAGAAGAAAGTCACTTCTAAGCTACTTCAAACCTCTATG-TCCACGGAGAAAATGT 1087 |||||||||||||||||||||||| || |||||||||||| | |||| ||||||||||| Sbjct 249 TGGTGAGAAGAAAGTCACTTCTAAACTTCTTCAAACCTCT-TCATCCATGGAGAAAATGT 307 Query 1088 ACAAGATTGATGACCATGTGGCTTGTGCTGTGGCTGG 1124 ||||||| |||||||||||||||||||| || ||||| Sbjct 308 ACAAGATCGATGACCATGTGGCTTGTGCAGTTGCTGG 344 Score = 106 bits (57), Expect = 6e-22 Identities = 65/69 (94%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 751 GCACCAAGTTCTCAGCGAAATCAAGGAATCGAAAACTCAGAAGAGAACTCAGAGAAGAAA 810 |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||| Sbjct 33 GCACCAAGTTCTCAGCGAAATCAAGGAATCGAAAACCCAGAAGAGGACTCAGTGAACAAA 92 Query 811 TTTCTTCAG 819 ||||||||| Sbjct 93 TTTCTTCAG 101 > AT3G22110.1 | Symbols: PAC1 | 20S proteasome alpha subunit C1 | chr3:7792638-7794165 REVERSE LENGTH=1039 Length=1039 Score = 159 bits (86), Expect = 5e-38 Identities = 135/159 (85%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 967 GGA-GCTATTGGCAATGCTGGTTCTGCGATTGGAATCTTGGCAAAAGATGGAGTTGTGTT 1025 ||| || ||||| || || |||||||||||||||||||| | ||||| || |||||||| Sbjct 180 GGAGGCCATTGGAAACGCCGGTTCTGCGATTGGAATCTTATCCAAAGACGGTGTTGTGTT 239 Query 1026 GGTTGGTGAGAAGAAAGTCACTTCTAAGCTACTTCAAACCTCTATGTCCACGGAGAAAAT 1085 | | ||||||||||||||||| || ||||| ||||||||||| | || | |||||||| Sbjct 240 GATCGGTGAGAAGAAAGTCACCTCAAAGCTTCTTCAAACCTCAACCTCTGCTGAGAAAAT 299 Query 1086 GTACAAGATTGATGACCATGTGGCTTGTGCTGTGGCTGG 1124 ||||||||||||||||||||| || |||||||| ||||| Sbjct 300 GTACAAGATTGATGACCATGTTGCCTGTGCTGTTGCTGG 338 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66616123215 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5