BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493402 Length=1093 Score E Sequences producing significant alignments: (Bits) Value AT4G14905.1 | Symbols: | Galactose oxidase/kelch repeat superf... 346 3e-94 > AT4G14905.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:8526371-8528010 REVERSE LENGTH=1404 Length=1404 Score = 346 bits (187), Expect = 3e-94 Identities = 254/286 (89%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 85 AACTTCAGGCGTTTAATCGCTTCGCCAGAGATCTACATCGAACGGTCAGTAATTCGCCTC 144 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | | Sbjct 191 AACTTCAGGCGTTTAATGGCTTCGCCGGAGATCTACATCGAACGGTCAGTAATTCGTCGC 250 Query 145 ACTGAACATATCCTCTATGTAGCAATTAGATCACAAGCTACAAAAACCCTTACCTGGTAC 204 |||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||| Sbjct 251 ACTGAAAATATCCTCTATGTTGCAATTAGATCAGAAGCTACAAAAACCCTTAGCTGGTAC 310 Query 205 ACACTCAATTTAAAACCCTTTGGAACAACGGATATTAGCCATAGATTAGTAGAG-TTCCA 263 ||||||||| ||||||||||||||||||| || ||||||||||||||||| | ||||| Sbjct 311 ACACTCAATCTAAAACCCTTTGGAACAACAGAGATTAGCCATAGATTAGTTCCGGTTCCA 370 Query 264 TCATTCCCTTCAATTCCTGGATTTGGAACAACGATTATCGC-TGCCAGTTCTGAGA-TTG 321 |||||||||||||||||||||| ||||||||| |||||| | | || ||||||| | || Sbjct 371 TCATTCCCTTCAATTCCTGGATATGGAACAACTATTATCTCGT-CCGGTTCTGAAACTT- 428 Query 322 ACGTCATTGGTGGATATATCAATGGAGAATTTGTCTCCACTTTGTC 367 ||||||||||||||| || | |||||||| ||||| ||| |||| Sbjct 429 ACGTCATTGGTGGATGCATTGACGGAGAATTAGTCTCTACTGTGTC 474 Score = 292 bits (158), Expect = 4e-78 Identities = 193/209 (92%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 678 GCTTGAAGGTTGTACAGGTACAATTGTGAATCATGGTGGAAGACTTGCAATTCTATTTAA 737 |||| || |||||||||||| ||| ||||||||||||||| ||||||||||||| ||||| Sbjct 922 GCTTCAAAGTTGTACAGGTAGAATGGTGAATCATGGTGGACGACTTGCAATTCTGTTTAA 981 Query 738 GAAGTCTCCAACAGAAATTTGGTGTACAGAGATTGCAATGGAGAGGGCAGAAGAAGGAGG 797 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 982 GAAGTCTCCAACAGAAATTTGGCGTACAGAGATTGCAATAGAGAGGGCAGAAGAAGGAGG 1041 Query 798 ATGTATTAGTGGG--G----TGTGGTCTAATCATGTGCTTACTTTGACAGATTCCTTCAT 851 || |||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 1042 ATATATTAGTGGGAAGTTCTTGTGGTCTAATCATGTGCTTACTTTGACAGATTCCTTCAT 1101 Query 852 CATTGAACGAGCTCTAACTGTAACAGTTT 880 |||||||||||||||| |||||||||||| Sbjct 1102 CATTGAACGAGCTCTAGCTGTAACAGTTT 1130 Score = 211 bits (114), Expect = 1e-53 Identities = 174/202 (86%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 478 GAGCAAGTGAACTGCTTTGTAATGAATGATAAGATTTATAGAATGGGTCAGAAGACTATT 537 |||||| |||||| |||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct 677 GAGCAAATGAACTTCTTTGTGATGAATGATAAGATCTATAGAATAGGTCAGAATACTATG 736 Query 538 TTTGTTTACGATCCGAAAAAGGGTAGATTCGAGGAAGACTTGACGTTG--AATGCATTAT 595 |||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||| Sbjct 737 TTTGTTTACGATCCGAAAAAGGGTAGATTCGAGGAAGACTTGGCGTTGGGAA-G-ATTAT 794 Query 596 GGATCAAGGGTTGTTGCCCAATTGATAACATGTTGTACGGTTTTTATCT-CGA-GAGCCA 653 || |||| | | |||||| || |||||| |||||||||| |||||| | | | || ||| Sbjct 795 GGTTCAACGAATCTTGCCCTATAGATAACGTGTTGTACGGCTTTTAT-TGC-ATGAACCA 852 Query 654 AATATTTGCGTATGATTTAGTT 675 |||| ||||||| ||||||||| Sbjct 853 AATACTTGCGTACGATTTAGTT 874 Score = 191 bits (103), Expect = 1e-47 Identities = 118/125 (94%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 355 TCTC-CACTTTGTCGCTTCCTTCCTAACATGAAGGAGCCTCGTAAATGCGTCGCCGTGGG 413 |||| ||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct 491 TCTCACAC-TTGTCGCTTCCTCCCTAACATGAAGGAGCCACGTAAATGCGCCGCCGTGGG 549 Query 414 ATTGATCGACGGGAAATTATATGTTGTCAGAGGTTGTAACGCTCCGTCTTTGAATTGGGT 473 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 550 ATTGATCGACGGGAAATTATATGTTGTCGGAGGTTGTAACGCTCCGTCTTTGAGTTGGGT 609 Query 474 CGAGG 478 ||||| Sbjct 610 CGAGG 614 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53563981515 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5