BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493435
Length=2082
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14700.1 | Symbols: ATORC1A, ORC1A | origin recognition comp... 1437 0.0
AT4G12620.1 | Symbols: ORC1B, ATORC1B, UNE13 | origin of replic... 1367 0.0
> AT4G14700.1 | Symbols: ATORC1A, ORC1A | origin recognition complex
1 | chr4:8422231-8424760 FORWARD LENGTH=2530
Length=2530
Score = 1437 bits (778), Expect = 0.0
Identities = 988/1085 (91%), Gaps = 32/1085 (3%)
Strand=Plus/Plus
Query 660 ATA-TGATCAAGAATGGAATGGT-GGTAAAGAGGAGGAGATTGATGATAGTGAT-----G 712
||| ||||||||||||||||||| || |||||||||||||||||| |||||||| |
Sbjct 1051 ATAGTGATCAAGAATGGAATGGTAGG-AAAGAGGAGGAGATTGATTATAGTGATGAAGAG 1109
Query 713 A-TGAG---GA--A-G-A-A-AGTGTTTGTGCAGATTCAAAGAGTAAGAGAGGTTTAACG 762
| |||| || | | | | |||||| ||| | ||| ||||||||| |||| | |
Sbjct 1110 ATTGAGTTTGATGATGAAGAGAGTGTTCGTGGGGTTTCGAAGAGTAAGCGAGG--T---G 1164
Query 763 TGTGCGAATGT-TCGTAAAGGGCGTATCTTTGGGCTTGAAAAGGTGGGAACT-AAGCGGA 820
|||| ||| | ||||||||||||| ||||||||||||| |||||||| | | ||| |||
Sbjct 1165 -GTGCAAAT-TCTCGTAAAGGGCGTTTCTTTGGGCTTGAGAAGGTGGGGA-TGAAGAGGA 1221
Query 821 TTCCGGAACATGTGAGATTTCATAAGAAGAATGAGTTAGAAAAAGCGAAAGCTACTTTGT 880
|||| ||||||||||||| ||||||| ||| |||||||||||| ||||| ||||||||||
Sbjct 1222 TTCCTGAACATGTGAGATGTCATAAGCAGAGTGAGTTAGAAAAGGCGAAGGCTACTTTGT 1281
Query 881 TGTTGGCTACAAGTCCTAAGTCTCTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCACCG 940
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1282 TGTTGGCTACACGTCCTAAGTCACTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCACTG 1341
Query 941 CATTTATAAAGGGTTCAATCT-TGGATGATCAGTGTTTAGGAAGATGTATGTATATTCAT 999
| |||||||| || ||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct 1342 CGTTTATAAAAGGCTCAATCTCT-GATGATCAGTGTTTAGGTAGATGTATGTATATTCAT 1400
Query 1000 GGTGTTCCCGGGACTGGGAAGACTATTACTGTGCTATCTGTTATGAAGAATCT-AAAGGC 1058
||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||| ||
Sbjct 1401 GGTGTTCCCGGTACTGGGAAGACTATTAGTGTGTTATCTGTTATGAAGAATCTGAAA-GC 1459
Query 1059 TGAGGTTGAAGCGGGAAGCGTAAGCCCTTATTGCTTTGTGGAGATCAATGGTCTCAAATT 1118
|||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct 1460 TGAGGTTGAAGCGGGAAGCGTAAGTCCATATTGCTTTGTGGAGATAAATGGTCTCAAATT 1519
Query 1119 GGCTTCACCTGAGAACATTTACAGTTTTATCTATGAAGCGCTGAGTGGTCATCGCGTTGG 1178
|||||| |||||||||||||||||| |||||||||| | | ||||||||||||| || ||
Sbjct 1520 GGCTTCTCCTGAGAACATTTACAGTGTTATCTATGAGGGGTTGAGTGGTCATCGTGTAGG 1579
Query 1179 TTGGAAGAAAGCTCTACAGTCTCTGAATGAGAGGTTTGCAGAAGGAAAAAGGATTGGTAA 1238
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct 1580 TTGGAAGAAAGCTCTACAGTCTCTGAATGAGAGGTTTGCAGAGGGAAAAAAGATAGGTAA 1639
Query 1239 AGAGAATGAAAAGCCTTGTATACTTCTCATCGACGAACTTGATCTTCTAGTCACTAGAAA 1298
|||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1640 AGAGAATGAAAAGCCTTGCATACTTCTCATCGACGAGCTTGATGTTCTAGTCACTAGAAA 1699
Query 1299 TCAGTCTGTTTTATACAATATTTTGGATTGGCCTACCAAGCCTAACTCCAGATTGGTTGT 1358
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1700 TCAGTCTGTTTTATACAACATTTTGGATTGGCCTACCAAGCCTAACTCCAAATTGGTTGT 1759
Query 1359 GTTGGGAATAGCAAACACTATGGATCTTCCAGAGAAGGTGCTTCCTCGGATTTCAAGCCA 1418
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1760 GTTGGGAATAGCAAACACTATGGATCTTCCAGAGAAGTTGCTTCCTCGGATATCAAGCCG 1819
Query 1419 AATGGGTATACAGAGACTGTGTTTTGGTCCTTATAACCACATGCAGCTACAAGAAATCAT 1478
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 1820 AATGGGTATACAGAGACTGTGTTTCGGTCCTTATAACCACAGGCAGCTACAAGAAATCAT 1879
Query 1479 TTCTACAAGATTGAAAGGAATCAATGCTTTTGAGAAGACAGCTATTGAATTTGCTTCGAG 1538
||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1880 TTCTACAAGGTTGGAAGGAATCAATGCTTTTGAGAAGACAGCTATCGAATTTGCTTCAAG 1939
Query 1539 AAAGGTAGCTGCGGTTTCAGGAGATGCAAGACGTGCGCTTGAGATATGCAGGCGTGCAGC 1598
||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1940 AAAAGTAGCTGCGATATCAGGAGATGCAAGACGCGCGCTTGAGATATGCAGGCGTGCAGC 1999
Query 1599 AGAAGTAGCGGAGTACCGTCTAAAGAAGACTAACAAAACTGCAAAGAGTCAGCTGGTGAT 1658
||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||
Sbjct 2000 GGAAGTAGCGGATTACCGTCTAAAGAAGAGTAACATATCTGCAAAGAGTCAGCTGGTGAT 2059
Query 1659 TATGGCAGATGTTGAAGTAGCCATTCAAGAGATGTTTCAGGCACCGCATATTCAAGTTAT 1718
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2060 TATGGCAGATGTTGAAGTAGCCATTCAAGAGATGTTTCAGGCACCTCATATTCAAGTTAT 2119
Query 1719 GAAGA 1723
|||||
Sbjct 2120 GAAGA 2124
Score = 521 bits (282), Expect = 8e-147
Identities = 336/361 (93%), Gaps = 8/361 (2%)
Strand=Plus/Plus
Query 1727 TTTACAAAACAGGAATGGCAGAGACAA-CTTTTGACAGAGTGGCAACAACAGTATCGTCT 1785
||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct 2173 TTTACAAAACAGGAATGGCAGAGACAAGC-TTTGACAGAGTAGCAACAACAGTATCGTCT 2231
Query 1786 CTTTGCTTAACCAATGGAGAAGCTTTTCCGGGTTGGGACATTCTTCTCAAAATCAGTTGC 1845
|||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 2232 ATTTGCTTAACCAATGGTGAAGCTTTTCCCGGTTGGGACATTCTTCTCAAAATCGGTTGT 2291
Query 1846 GATCTTGGTGAATGCAGAATCGTTCTCTGTGAACCTGGAGAGAAGCACAGATTGCAGAAG 1905
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2292 GATCTTGGTGAATGCAGAATCGTTCTTTGTGAACCTGGAGAGAAGCACAGATTGCAGAAG 2351
Query 1906 CTGCAGCTGAATTTTCCAAGTGATGATGTTGCTTTTGCATTGAAAGACAATAAGGATCTT 1965
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2352 CTGCAGCTTAATTTTCCAAGTGATGATGTTGCTTTTGCATTGAAAGACAATAAGGATCTT 2411
Query 1966 CCATGGTTGCCCAATTACTTGTGAGTTTTTGCTAGTTTAAGGAAAACTT-GGATA--TTG 2022
||||||||| |||||||||||||| |||||||||||||||||||||||| ||| | |||
Sbjct 2412 CCATGGTTGGCCAATTACTTGTGATTTTTTGCTAGTTTAAGGAAAACTTTGGAGAGATTG 2471
Query 2023 ATA-TGTAACGCATAGTTTGATTTCTGGTGTATAAAGTATAAATATTGTTACAAGACAAC 2081
||| |||||| || ||||||||||||| ||||||| |||||||| ||||||| |||||
Sbjct 2472 ATAATGTAACACA--GTTTGATTTCTGGAGTATAAACTATAAATACAGTTACAACACAAC 2529
Query 2082 C 2082
|
Sbjct 2530 C 2530
Score = 396 bits (214), Expect = 5e-109
Identities = 309/354 (87%), Gaps = 9/354 (3%)
Strand=Plus/Plus
Query 2 agaagaagaagaagaagaagaTAGCTGAGGAAGCTTCGTTCTCTCCTACATCCCCAAATC 61
||||| ||||||||||||||||| | ||||| ||| ||||||||| || |||| ||
Sbjct 283 AGAAGTCGAAGAAGAAGAAGATAGATCCGGAAGTTTCCTTCTCTCCTGTTTCACCAATTC 342
Query 62 GATCTGAGACG-A-TA-ACGAAGAAGAAGAACAGAGTTTATTACAATAAAGTTGAATTCA 118
||||||||||| | | |||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 343 GATCTGAGACGAAGAAGACGAAGAAGAAGAAGAGAGTTTATTACAACAAAGTCGAATTCG 402
Query 119 ATGTAACCGAATTTGAAATTGGTGATCATGTTTACGTTaagagaagagaagacacgaatt 178
| | ||||||||| ||||| |||||| ||||||||||||| |||| ||||||| |||||
Sbjct 403 ACGAAACCGAATTCGAAATCGGTGATGATGTTTACGTTAAAAGAACAGAAGACGCGAATC 462
Query 179 cagat---gaagaagaagaagatccagagatcgaagattgtcagatGTGTTTCAAATCAG 235
||||| |||||||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct 463 CAGATGAAGAAGAAGAAGAAGATCCAGAAATCGAAGATTGTCAGATCTGCTTCAAATCAC 522
Query 236 ATACT-A-AC-ATAATGATTGAATGTGATGATTGTTTAGGCGGGTTTCATTTGAATTGCT 292
||||| | || ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 523 ATACTAACACAATAATGATTGAATGTGATGATTGTTTAGGTGGATTTCATTTGAATTGCT 582
Query 293 TGAAACCGCCATTGAAAGATGTTCCCAAAGGTGATTGGATCTGTCAATTCTGTG 346
|||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct 583 TGAAACCGCCATTGAAGGAAGTTCCTGAAGGTGATTGGATCTGTCAATTCTGTG 636
Score = 318 bits (172), Expect = 1e-85
Identities = 198/211 (94%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 447 AGCTCGTTGGTATATGATACCTGAAGAGACGGTTTCGGGGAGACAACGGCATAATCTGAA 506
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 797 AGCTCGTTGGTATATGATACCTGAAGAGACGGTTTTAGGGAGACAACGTCATAATCTGAA 856
Query 507 ACGCGAGCTTTATTTGACGAATGATTTTGCTGATATAGAGATGGAATGTCTTCTTAGGCA 566
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 857 ACGAGAGCTTTATTTGACGAATGATTTTGCTGATATAGAGATGGAATGTGTTCTTAGGCA 916
Query 567 TTGTTATGTCAAGTGTCCTATGGAGTTTTCGAAAGCGAGTAATGATGGTGATGATGTGTT 626
||||| ||| || ||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 917 TTGTTTTGTGAAATGTCCTAAGGAGTTTTCGAAAGCTAGTAATGATGGTGATGATGTGTT 976
Query 627 TTTATGTGAGTATGAATATGATGTGCATTGG 657
||| ||||||||||| |||||||| ||||||
Sbjct 977 TTTGTGTGAGTATGAGTATGATGTTCATTGG 1007
> AT4G12620.1 | Symbols: ORC1B, ATORC1B, UNE13 | origin of replication
complex 1B | chr4:7459646-7462253 REVERSE LENGTH=2608
Length=2608
Score = 1367 bits (740), Expect = 0.0
Identities = 980/1090 (90%), Gaps = 39/1090 (4%)
Strand=Plus/Plus
Query 660 ATA-TGATCAAGAATGGAATGGT-GGTAAAGAGGAGGAGATTGATGATAGTGATGATGAG 717
||| ||||||||| ||||||||| || || ||||||||| |||||||||||||||| ||
Sbjct 1055 ATAGTGATCAAGAGTGGAATGGTAGG-AAGGAGGAGGAGGTTGATGATAGTGATGAAGA- 1112
Query 718 GA-AGAAAGTGTTTG-TGCAGATTCAAAGAGTAA--GA-GAGGTTTAACGT-GTGC--GA 769
|| || || || || || || |||||||| || ||||||| || | |||| ||
Sbjct 1113 GATGGAGCTTG-ATGATGAAGTTTTGAAGAGTAAGCGAGGAGGTTTGAC-TAGTGCAAGA 1170
Query 770 --A--T--G---T-TCGTAAAGGGCGTA-TCTTTGGGCTTGAAAAGGTGGGAACT-AAGC 817
| | | | |||||||||| | | |||||||| |||| |||||||| | | ||||
Sbjct 1171 GGAGGTGCGAACTCTCGTAAAGGGAG-ATTCTTTGGGGTTGAGAAGGTGGGGA-TGAAGC 1228
Query 818 GGATTCCGGAACATGTGAGATTTCATAAGAAGAATGAGTTAGAAAAAGCGAAAGCTACTT 877
|||||| ||||||||||||| ||||||| ||| |||||||||||| |||||||||||||
Sbjct 1229 TGATTCCTGAACATGTGAGATGTCATAAGCAGAGTGAGTTAGAAAAGGCGAAAGCTACTT 1288
Query 878 TGTTGTTGGCTACAAGTCCTAAGTCTCTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCA 937
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1289 TGTTGTTGGCTACACGTCCTAAGTCTCTTCCTTGTAGAAGCAAAGAAATGGAAGAGATCA 1348
Query 938 CCGCATTTATAAAGGGTTCAATCTTGGATGATCAGTGTTTAGGAAGATGTATGTATATTC 997
| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1349 CTTCGTTTATAAAAGGTTCAATCTCGGATGATCAGTGTTTAGGAAGATGTATGTATATTC 1408
Query 998 ATGGTGTTCCCGGGACTGGGAAGACTATTACTGTGCTATCTGTTATGAAGAATCTAAAGG 1057
|||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||
Sbjct 1409 ATGGTGTTCCCGGGACTGGGAAGACTATTAGTGTGTTATCGGTTATGAAGAATCTGAAGG 1468
Query 1058 CTGAGGTTGAAGCGGGAAGCGTAAGCCCTTATTGCTTTGTGGAGATCAATGGTCTCAAAT 1117
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1469 CTGAGGTTGAAGAGGGAAGCGTAAGCCCTTATTGCTTTGTGGAGATCAATGGTCTCAAAT 1528
Query 1118 TGGCTTCACCTGAGAACATTTACAGTTTTATCTATGAAGCGCTGAGTGGTCATCGCGTTG 1177
|||||||||||||||||||||||||| | ||||||||||| ||||||||||||| || |
Sbjct 1529 TGGCTTCACCTGAGAACATTTACAGTGTAATCTATGAAGCATTGAGTGGTCATCGAGTCG 1588
Query 1178 GTTGGAAGAAAGCTCTACAGTCTCTGAATGAGAGGTTTGCAGAAGGAAAAAGGATTGGTA 1237
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1589 GTTGGAAGAAAGCTCTACAGTGTCTAAATGAGAGGTTTGCAGAAGGAAAAAGGATTGGTA 1648
Query 1238 AAGAGAATGAAAAGCCTTGTATACTTCTCATCGACGAACTTGATCTTCTAGTCACTAGAA 1297
||||| |||| |||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1649 AAGAGGATGAGAAGCCTTGCATACTTCTCATCGACGAACTTGATCTTCTAGTAACTAGAA 1708
Query 1298 ATCAGTCTGTTTTATACAATATT-TTGGATTGGCCTACCAAGCCTAACTCCAGATTGGTT 1356
| ||||||||||||||||| ||| ||| |||||||||||||||||||||||| ||| |||
Sbjct 1709 ACCAGTCTGTTTTATACAACATTCTTG-ATTGGCCTACCAAGCCTAACTCCAAATTAGTT 1767
Query 1357 GTGTTGGGAATAGCAAACACTATGGATCTTCCAGAGAAGGTGCTTCCTCGGATTTCAAGC 1416
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1768 GTGTTGGGAATAGCAAACACTATGGATCTTCCAGAGAAGCTGCTTCCTCGGATTTCTAGC 1827
Query 1417 CAAATGGGTATACAGAGACTGTGTTTTGGTCCTTATAACCACA-TGCAGCTACAAGAAAT 1475
| |||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||
Sbjct 1828 CGAATGGGTATACAGAGACTATGTTTCGGTCCTTATAACCACACT-CAGCTACAAGAAAT 1886
Query 1476 CATTTCTACAAGATTGAAAGGAATCA-ATGCTTTTGAGAAGACAGCTATTGAATTTGCTT 1534
|||||||||||| ||||| ||||| | ||||||| |||||||||||||||||||||||||
Sbjct 1887 CATTTCTACAAGGTTGAATGGAAT-AGATGCTTTCGAGAAGACAGCTATTGAATTTGCTT 1945
Query 1535 CGAGAAAGGTAGCTGCGGTTTCAGGAGATGCAAGACGTGCGCTTGAGATATGCAGGCGTG 1594
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1946 CGAGAAAAGTAGCTGCGATTTCAGGAGATGCAAGACGTGCGCTTGAGATATGCAGGCGTG 2005
Query 1595 CAGCAGAAGTAGCGGAGT-ACCGTCTAAAGAAGACTAACAAAACTGCAAAGAGTCAGCTG 1653
| |||||||||||||| | |||||||||| | |||||||| | ||||||| |||||||
Sbjct 2006 CTGCAGAAGTAGCGGA-TCACCGTCTAAATA---CTAACAAATCCGCAAAGAATCAGCTG 2061
Query 1654 GTGATTATGGCAGATGTTGAAGTAGCCATTCAAGAGATGTTTCAGGCACCGCATATTCAA 1713
|||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||
Sbjct 2062 GTGATTATGGCAGATGTTGAAGCAGCTATCCAAGAGATGTTTCAGGCACCTCATATTCAA 2121
Query 1714 GTTATGAAGA 1723
|| |||||||
Sbjct 2122 GTGATGAAGA 2131
Score = 420 bits (227), Expect = 3e-116
Identities = 255/269 (95%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 1727 TTTACAAAACAGGAATGGCAGAGACAACTTTTGACAGAGTGGCAACAACAGTATCGTCTC 1786
|||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||
Sbjct 2180 TTTACAAAACAGGAATGGCAGAGACAACATTTGACCGAGTGGCAACGACAGTATCGTCTA 2239
Query 1787 TTTGCTTAACCAATGGAGAAGCTTTTCCGGGTTGGGACATTCTTCTCAAAATCAGTTGCG 1846
| |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct 2240 TCTGCTTAACCAATGGAGAAGCTTTTCCAGGTTGGGACATTCTTCTTAAAATCGGTTGCG 2299
Query 1847 ATCTTGGTGAATGCAGAATCGTTCTCTGTGAACCTGGAGAGAAGCACAGATTGCAGAAGC 1906
||||||||||||| || ||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 2300 ATCTTGGTGAATGTAGGATCATTCTCTGTGAACCTGGAGAGAAGCATAGATTGCAGAAGC 2359
Query 1907 TGCAGCTGAATTTTCCAAGTGATGATGTTGCTTTTGCATTGAAAGACAATAAGGATCTTC 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2360 TGCAGCTGAATTTTCCAAGTGATGATGTTGCTTTTGCATTGAAAGACAATAAGGATCTTC 2419
Query 1967 CATGGTTGCCCAATTACTTGTGAGTTTTT 1995
||||| || ||||||||||||||||||||
Sbjct 2420 CATGGCTGGCCAATTACTTGTGAGTTTTT 2448
Score = 372 bits (201), Expect = 9e-102
Identities = 295/339 (87%), Gaps = 11/339 (3%)
Strand=Plus/Plus
Query 15 gaagaagaTAGCTGAGGA-AGCTTCGTTCTCTCCTACATCCCCAAATCGATCTGAGACGA 73
|||||||| || || || || ||| ||| ||||| || |||| | ||||||||||||
Sbjct 303 GAAGAAGA-AGAAGAAGATAGATTCCTTCACTCCTGTTTCACCAATTAGATCTGAGACGA 361
Query 74 -T----A-ACGAAGAAGAAGAACAGAGTTTATTACAATAAAGTTGAATTCAATGTAACCG 127
| | |||||||||||||| |||||||||||||||||||| |||||| | | |||||
Sbjct 362 TTAAGAAGACGAAGAAGAAGAAGAGAGTTTATTACAATAAAGTCGAATTCGACGAAACCG 421
Query 128 AATTTGAAATTGGTGATCATGTTTACGTTaagagaagagaagacacgaattcagatgaag 187
|||| ||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
Sbjct 422 AATTCGAAATCGGTGATGATGTTTACGTTAAGAGAAGAGAAGATTCGAATTCAGAT---G 478
Query 188 aagaagaagatccagagatcgaagattgtcagatGTGTTTCAAATCAGATACTAACATAA 247
|||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct 479 AAGAAGAAGATCCAGAAATTGAAGATTGTCAGATTTGTTTCAAATCAGATACTAACATAA 538
Query 248 TGATTGAATGTGATGATTGTTTAGGCGGGTTTCATTTGAATTGCTTGAAACCGCCATTGA 307
||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct 539 TGATTGAGTGTGATGATTGTTTAGGTGGATTTCATTTGAAATGCTTGAAACCGCCATTGA 598
Query 308 AAGATGTTCCCAAAGGTGATTGGATCTGTCAATTCTGTG 346
| || ||||| |||||||||||||||||||||||||||
Sbjct 599 AGGAAGTTCCTGAAGGTGATTGGATCTGTCAATTCTGTG 637
Score = 318 bits (172), Expect = 1e-85
Identities = 198/211 (94%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 448 GCTCGTTGGTATATGATACCTGAAGAGACGGTTTCGGGGAGACAACGGCATAATCTGAAA 507
||||||||||||||||||||||||||||| ||||||||| | |||| |||||||||||||
Sbjct 802 GCTCGTTGGTATATGATACCTGAAGAGACCGTTTCGGGGCGTCAACCGCATAATCTGAAA 861
Query 508 CGCGAGCTTTATTTGACGAATGATTTTGCTGATATAGAGATGGAATGTCTTCTTAGGCAT 567
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 862 CGAGAGCTTTATTTGACGAATGATTTTGCTGATATAGAGATGGAATGTATTCTTAGGCAT 921
Query 568 TGTTATGTCAAGTGTCCTATGGAGTTTTCGAAAGCGAGTAATGATGGTGATGATGTGTTT 627
|||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 922 TGTTCTGTCAAGTGTCCTAAGGAGTTTTCGAAAGCTAGTAATGATGGTGATGATGTGTTC 981
Query 628 TTATGTGAGTATGAATATGATGTGCATTGGC 658
|| ||||||||||| |||||||| |||||||
Sbjct 982 TTGTGTGAGTATGAGTATGATGTTCATTGGC 1012
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103212320520
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5