BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493441
Length=1908
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14650.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1430 0.0
> AT4G14650.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: N-terminal protein myristoylation;
EXPRESSED IN: 6 plant structures; EXPRESSED DURING:
petal differentiation and expansion stage; Has 2407 Blast
hits to 1833 proteins in 310 species: Archae - 19; Bacteria
- 223; Metazoa - 708; Fungi - 285; Plants - 140; Viruses -
42; Other Eukaryotes - 990 (source: NCBI BLink). | chr4:8400574-8402911
REVERSE LENGTH=2179
Length=2179
Score = 1430 bits (774), Expect = 0.0
Identities = 936/1014 (92%), Gaps = 12/1014 (1%)
Strand=Plus/Plus
Query 901 TGAAGGGAACTCAAAGTGTTGTGAGCAAACTGAATTGGACAGAGTCTGGTAATGAAGAGA 960
|||| |||||||||| ||||||||||||| |||||| ||||| ||||||||||||||| |
Sbjct 996 TGAATGGAACTCAAACTGTTGTGAGCAAATTGAATTCGACAGTGTCTGGTAATGAAGA-A 1054
Query 961 A-GCTCTGTGCGATTCATGAGATTGTCTTTGAATCTCCAAGCTCTCTTGGAACTGTTGGA 1019
| |||||||| |||| ||||||||||||||||||||||||| | | ||| ||||||| ||
Sbjct 1055 AGGCTCTGTGTGATTGATGAGATTGTCTTTGAATCTCCAAGATGTTTTGCAACTGTT-GA 1113
Query 1020 -ACTGAAGAAAACATGGTGAATGAGTCTTTGGACGAAATTTTTCATTCAGAGGAAGTTGT 1078
||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1114 TACTGATGAAAACATGGTGAATGAGTCTCGGGACGAAATTGTTCATTCAGAGGAAGTTGT 1173
Query 1079 AAAGCTTGATCAAGAGACTGGTATGGAACAGAGAACAGGAAGGGAAGGGATTCCTGAAAT 1138
||||||||||||||||||||| || |||||||||| ||||||||||| | ||||||||||
Sbjct 1174 AAAGCTTGATCAAGAGACTGGAATTGAACAGAGAAGAGGAAGGGAAGAGTTTCCTGAAAT 1233
Query 1139 CGAGCCACAGGAGATTCTGAATCTGGACTATCGCGTTGTTCATGATGAAGAAGTTACAGA 1198
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1234 CGAGCCACAGGAGATTCTGAATCTGGACTATCGTATTGTTCATGATGAAGAAGTTACAGA 1293
Query 1199 TGAAGGAAAAGTCGGTAAGGCAATCTCTAACTCTAAACCTGGTTTGCAAGAGTCAGATGC 1258
||||||||| || |||||| ||||| |||||||||||| ||| |||||||||| ||||
Sbjct 1294 CAAAGGAAAAGCCGATAAGGCGATCTCCAACTCTAAACCTTGTTCGCAAGAGTCAAATGC 1353
Query 1259 CATTCAAGAGGCCGGTCTTGGAGTTTATAAAGCAGAGAAGGACAAAAGAGAAGCGAGTCT 1318
| |||||| | ||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1354 AAATCAAGACACTGGTCTTGGAGTTTATAAAGAAGAGAAGGAGAAAAGAGAAGCGAGTCT 1413
Query 1319 GAA-ACGCATGTATCGGTGCAGATCGCTCCCAGTGAGCCAGAATAGTAGAGTTATTGGAG 1377
|| |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1414 -AAGACGCATGTATCGATGTAGATCACTCCCAGTGAGCCAGAATAGTAGAGTTATTGGAG 1472
Query 1378 ATTCGCTGGTTCAACAGTTGGTTTCAGAGGTTGCGTTTACTTCAAGAAACAAGATGGGTC 1437
||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1473 ATTCGCTTGTTCAACATTTGGTTTCAGAGGTTGCGTTTCCTTCAAGAAACAAGATGGGTT 1532
Query 1438 TAAAGAAAGCTAACACGTCTG-AGGCTCTACTTGTTCCTTGCGTAGGAAGCAACAAAGCG 1496
|| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| ||
Sbjct 1533 TAGAGAAAGCTAACACGTCTGCA-GCTCTGCTTGTTCCTTGCGTAGGAAGCAACAAAACG 1591
Query 1497 CAAGAAACTATTGAAGCGATAACTGAAAGCAATAAAGAAGCTAGGCTCGAGATGCGAGCT 1556
||||| |||||||||||||||| |||||||| |||||||||||| | ||||||| ||||
Sbjct 1592 CAAGAGACTATTGAAGCGATAATTGAAAGCAGTAAAGAAGCTAGATTTGAGATGCCAGCT 1651
Query 1557 CCTAGCTTTGGTCATGACCTAAGAATCGAAGAAAGAAGTGATGAATCGACT-GAGAATAC 1615
|||||||||| ||||| ||||||||||||||||||| | ||||||||| | ||||||||
Sbjct 1652 CCTAGCTTTGATCATGGCCTAAGAATCGAAGAAAGACGCGATGAATCG-GTAGAGAATAC 1710
Query 1616 TCCGCTACTCTGTGAGGACAAGACTGAGATATACGAGGCAACAATCGATGTGGAAGAGAA 1675
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1711 TCCGGTACTCTGTGAGGACAAGACTGAGATATACGAGGCAACAATCGATGTGGAAGAGAA 1770
Query 1676 AACTGTGATGCTGAAGAGAAGTGAGTCTGTGAAATCAAGAGGCAGCGAGATGTCTCT-GG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1771 AACTGTGATGCTGAAGAGAAGTGAGTCTGTGAAATCAAGAGGCAGCGAGATGTCTCTAGG 1830
Query 1735 GCTCGTTGAAGAAACACAATGATAGCTTCAAAGAAACCAAGGGCTCAGAAGATAACCTGG 1794
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1831 G-TCGTTGAAGAAACACAATGATAGCTTCAAAGAAACCAAGGGCTCAGAAGATAACTTGG 1889
Query 1795 TGGACAAGAAAGCTTCGCCGGATTCTATGAAAGGCATAGTCAAAAAACGAAGTAAATCTT 1854
|||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||
Sbjct 1890 TGGACAAGAAAGCTTCACCTGATTCTATGAAAGGCATAGTCAGAAAACGGAGTAAATCTT 1949
Query 1855 CGCTCTTGGGAACATGCCTTTGTTGCACCACCGCAATGAATTGAACTAATTATT 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1950 CGCTCTTGGGAACATGCCTTTGTTGCACCACCGCAATGAATTGAACTAATTATT 2003
Score = 1297 bits (702), Expect = 0.0
Identities = 905/1001 (90%), Gaps = 21/1001 (2%)
Strand=Plus/Plus
Query 1 CGTTCAGACAGAAACCTCTAATTG--CTC----TC-TG-TTTCA-ATTT-TTC-AGAGAT 49
||||||||||||||||||| |||| ||| || | ||||| |||| ||| | ||||
Sbjct 1 CGTTCAGACAGAAACCTCTTATTGTTCTCTGTTTCGGGTTTTCAGATTTGTTCAAAAGAT 60
Query 50 TTTGATCTATTGAAAATTGAACAAAGGAGATGATATGGGAAACAACAACGCCACTGCCAT 109
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 61 TTTGATCTGTTGAAAATTGAACAAAGGAGATGATATGGGAAACAACAACGCAACTGCCAT 120
Query 110 TTTAACAGATCAAGAAGAGAGGTCAAAGC-TAGAAATCAATGGAGTGTCTCCATTGGCCT 168
|||| |||||||||||||||| ||||||| || ||| ||||||| | |||||||||| |
Sbjct 121 TTTATCAGATCAAGAAGAGAGCTCAAAGCTTA-AAAACAATGGAATACCTCCATTGGCTT 179
Query 169 CTTCCGTAGATACCACGCAAGAGCAGGTGTTTTTTGCTGGTGAAGGTAAAGATGGAGATG 228
|||||||||||||||||||||| | ||||||| ||||| ||||| |||||||||||||||
Sbjct 180 CTTCCGTAGATACCACGCAAGATCTGGTGTTTATTGCTTGTGAAAGTAAAGATGGAGATG 239
Query 229 AAGAGAAAGAGAGCTCAAAGCTAGAAACCAATGGAAACAT-TCCATTGAATTAC-GTTTC 286
|||||| ||||||||||||||||||||||||||| || | ||||||| | | | |||||
Sbjct 240 AAGAGATAGAGAGCTCAAAGCTAGAAACCAATGG-AATGTCTCCATTGGACT-CTGTTTC 297
Query 287 TTTAGAGACCGTGCAAGATCAAGGGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGA 346
||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct 298 TTTAGAGACCGCGCAAGATCAAGTGTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAAGA 357
Query 347 GAAAGAGAGCTCAAAGTTAGAAACCAATGGAATGTCTCCATTGGAGACTGTTTCCGTAGA 406
||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 358 GAAAGAGAGCTCAAACCTAGAAACCAATGGAATGTCTCCATTGGAGTCTGTTCCCGTAGA 417
Query 407 GATCACGCAAAAGCAGGTGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGA 466
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 418 GATCACGCAAGAGCAAGTGTTTCTTGAGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGA 477
Query 467 AAGCTCAAAGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATATCCGTAAAGACCAG 526
||| | ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||
Sbjct 478 AAGTTTAAAGCTAGAAATCAATGGAATGTCTCCATTGGACTCAATATTAGTAGAGACCAG 537
Query 527 GCAAGATCAGTTGTTTCTTGCGGTTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAGCTC 586
||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct 538 GCAAGATCAGTTGTTTCTTGCGGGTGAAGAAAAAGAAGGAGATCTAGAGAAAGAGAGCTC 597
Query 587 AAAGCTAGAAACCAATGGAATGTCTCCATTAGACTCTATTTCCGTAGAGACCACACAAGA 646
| ||||||||| |||||||||||||| || ||||||||| || |||||||||| ||||
Sbjct 598 GACGCTAGAAACTAATGGAATGTCTCCGTTTGACTCTATTCCCATAGAGACCACGGAAGA 657
Query 647 TCAGTTGTTTCTCGCAGGTGAAGGAAAAGAAGGAGATGAAGAGAAAGAGAGTTTGTCTAA 706
|||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| | |
Sbjct 658 TCAGTTCTTTCTTGCAGGTGAAGGAAACGATGGAGATGAAGAGAAAGAGAGTTTGTGTGA 717
Query 707 TGGTGTTGAAGAAACAGAACAACATAGCAAGGAATTT-GTTGATGAATCGAAAGTaaaaa 765
|||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||
Sbjct 718 TGGTGTTGAAGAAACAGAACCACATAGCAAGG-ATTTAGTTGATGAACCGAAAGTAAAAC 776
Query 766 aaTTCAAAGAAGAGATGGACCAGAGTGGCTTGGAGAGCTTGGTAATGGAAACAGCTGAGA 825
| ||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 777 ATTTCGAAGAAGAGATGGACCATAGTGGCTTGGAGAGCTTGGTAATGGAAACATCTGAGA 836
Query 826 AGCTTCAAAAACAGACATCAGTTGCGAAAGGTGTTGAAACTTTGAGTGAAGCAAGAGAAG 885
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 837 AGCTTCAAAAACAGACATCAGTTGCGAAAGGTGTTGAAAATTTGAGTGAAGCAAGAGAAG 896
Query 886 TGGAAGAGTTGTCTATGAAGGGAACTCAAAGTGTTGTGAGCAAACTGAATTGGACAGAGT 945
|||||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||| ||
Sbjct 897 TGGAAGTGTTGTCTATGAATGGAACTCAAACTGTTGTGAGCAAATTGAATTCGACAGTGT 956
Query 946 CTGGTAATGAAGAGAAG-CTCTGTGCGATTCATGAGATTGT 985
||||||||||||| ||| ||||||| |||| ||||||||||
Sbjct 957 CTGGTAATGAAGA-AAGGCTCTGTGTGATTGATGAGATTGT 996
Score = 442 bits (239), Expect = 6e-123
Identities = 396/470 (84%), Gaps = 17/470 (4%)
Strand=Plus/Plus
Query 235 AAGAGAGCTCAAAGC-TAGAAACCAATGGAA-ACATTCCATTGAATTACGTTTCTTTAGA 292
||||||||||||||| || ||| |||||||| || ||||||| || | ||| ||||
Sbjct 135 AAGAGAGCTCAAAGCTTA-AAAACAATGGAATAC-CTCCATTGGCTT-C--TTCCGTAGA 189
Query 293 GACCGTGCAAGATCAAGG-GTTTCTTGCGGGTG-AAGAAAAAGATGGAGATCAAGAGAAA 350
||| |||||||| || |||| |||| ||| ||| |||||||||||| |||||| |
Sbjct 190 TACCACGCAAGATC-TGGTGTTTATTGCTTGTGAAAG-TAAAGATGGAGATGAAGAGATA 247
Query 351 GAGAGCTCAAAGTTAGAAACCAATGGAATGTCTCCATTGGAGACTGTTTCCGTAGAGATC 410
|||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 248 GAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTTCTTTAGAGACC 307
Query 411 ACGCAAAAGCAGGTGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAGC 470
||||| | || |||||||||| ||||||||||||||||||||| ||||||| || |||
Sbjct 308 GCGCAAGATCAAGTGTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAAGAGAAAGAGAGC 367
Query 471 TCAAAGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATATCC-GTAAAGACCAGGCA 529
||||| ||||||||||||||||||||||| ||||| || | ||| ||| ||| || |||
Sbjct 368 TCAAACCTAGAAACCAATGGAATGTCTCCATTGGAGTCTGT-TCCCGTAGAGATCACGCA 426
Query 530 AGATCA-GTTGTTTCTTGCGGTTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAGCTCAA 588
||| || || |||||||| || ||||||||||||||||||||||||||| || || | ||
Sbjct 427 AGAGCAAGT-GTTTCTTGAGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAGTTTAA 485
Query 589 AGCTAGAAACCAATGGAATGTCTCCATTAGACTCTAT-TTCCGTAGAGACCACACAAGAT 647
||||||||| |||||||||||||||||| ||||| || || |||||||||| ||||||
Sbjct 486 AGCTAGAAATCAATGGAATGTCTCCATTGGACTCAATATTA-GTAGAGACCAGGCAAGAT 544
Query 648 CAGTTGTTTCTCGCAGGTGAAGGAAAAGAAGGAGATGAAGAGAAAGAGAG 697
||||||||||| || ||||||| ||||||||||||| ||||||||||||
Sbjct 545 CAGTTGTTTCTTGCGGGTGAAGAAAAAGAAGGAGATCTAGAGAAAGAGAG 594
Score = 436 bits (236), Expect = 3e-121
Identities = 396/472 (84%), Gaps = 16/472 (3%)
Strand=Plus/Plus
Query 122 AGA-AGAGAGGTCAAAGCTAGAAATCAATGGAGTGTCTCCATTGG-C-CT-CTTCCGTAG 177
||| |||||| ||||||||||||| ||||||| |||||||||||| | || ||| |||
Sbjct 243 AGATAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTTCTTTAG 302
Query 178 ATACCACGCAAGAGCAGGTGTTTTTTGCTGGTGAAGGTAAAGATGGAGATGAAGAGAAAG 237
| ||| ||||||| || |||||| ||| ||||||| ||||||||||||||||||||||
Sbjct 303 AGACCGCGCAAGATCAAGTGTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAAGAGAAAG 362
Query 238 AGAGCTCAAAGCTAGAAACCAATGGAAACAT-TCCATTGAATTAC-GTTTCTTTAGAGAC 295
|||||||||| |||||||||||||||| | ||||||| | | | ||| | ||||||
Sbjct 363 AGAGCTCAAACCTAGAAACCAATGGAATG-TCTCCATTGGAGT-CTGTTCCCGTAGAGAT 420
Query 296 CGTGCAAGATCAAGGGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAG 355
| |||||| |||| |||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 421 CACGCAAGAGCAAGTGTTTCTTGAGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAG 480
Query 356 CTCAAAGTTAGAAACCAATGGAATGTCTCCATTGGAGACTGT-TTCCGTAGAGATCACGC 414
| |||| |||||| ||||||||||||||||||||| | | || ||||||| || ||
Sbjct 481 TTTAAAGCTAGAAATCAATGGAATGTCTCCATTGGACTCAATATTA-GTAGAGACCAGGC 539
Query 415 AAAAGCAGGTGTTTCTTGCGGGTGAAGAAAAAGATGGAGATCAAGAGAAGGAAAGCTCAA 474
|| | ||| ||||||||||||||||||||||||| ||||||| |||||| || ||||| |
Sbjct 540 AAGATCAGTTGTTTCTTGCGGGTGAAGAAAAAGAAGGAGATCTAGAGAAAGAGAGCTCGA 599
Query 475 AGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATATCCG-TAAAGACCA-GGCAAGA 532
||||||||| ||||||||||||||||| ||||| || ||| || |||||| || ||||
Sbjct 600 CGCTAGAAACTAATGGAATGTCTCCGTTTGACTCTAT-TCCCATAGAGACCACGG-AAGA 657
Query 533 TCAGTTGTTTCTTGC-GGTTGAAGAAAAAGATGGAGATCAAGAGAAAGAGAG 583
|||||| |||||||| ||| |||| ||| ||||||||| |||||||||||||
Sbjct 658 TCAGTTCTTTCTTGCAGGT-GAAGGAAACGATGGAGATGAAGAGAAAGAGAG 708
Score = 327 bits (177), Expect = 2e-88
Identities = 311/372 (84%), Gaps = 24/372 (6%)
Strand=Plus/Plus
Query 338 AGATCAAGAGAAAGAGAGCTCAAAG-TTAGAAACCAATGGAATGTCTCCATTGGAGACTG 396
||||| | || |||||||||||||| ||| ||| ||||||||| ||||||| | | ||
Sbjct 127 AGATC-A-AG-AAGAGAGCTCAAAGCTTA-AAAACAATGGAATACCTCCATT-G-G-CT- 178
Query 397 T-TTCCGTAGAGATCACGCAAAAGCAGGTGTTTCTTGCGGGTG-AAGAAAAAGATGGAGA 454
| ||||||||| | ||||||| | | ||||||| |||| ||| ||| |||||||||||
Sbjct 179 TCTTCCGTAGATACCACGCAAGATCTGGTGTTTATTGCTTGTGAAAG-TAAAGATGGAGA 237
Query 455 TCAAGAGA-AGGAAAGCTCAAAGCTAGAAACCAATGGAATGTCTCCGTTGGACTCAATAT 513
| |||||| | || |||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 238 TGAAGAGATA-GAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTT 296
Query 514 CCGTAAAGACCAG-GCAAGATCA-GTTGTTTCTTGC-GGTTGAAGAAAAAGATGGAGATC 570
| || ||||| | ||||||||| || |||||||| ||| ||||||||||||||||||
Sbjct 297 CTTTAGAGACC-GCGCAAGATCAAGT-GTTTCTTGAAGGT-GAAGAAAAAGATGGAGATG 353
Query 571 AAGAGAAAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTAGACTCTATTTCCG 630
||||||||||||||||||| |||||||||||||||||||||||||| || ||| || |||
Sbjct 354 AAGAGAAAGAGAGCTCAAACCTAGAAACCAATGGAATGTCTCCATTGGAGTCTGTTCCCG 413
Query 631 TAGAGACCACACAAGATCA-GTTGTTTCTCGCAGG-TGAAGGAAAAGAAGGAGATGAAGA 688
|||||| ||| ||||| || || |||||| | ||| ||||| |||||| |||||| ||||
Sbjct 414 TAGAGATCACGCAAGAGCAAGT-GTTTCTTG-AGGGTGAAGAAAAAGATGGAGATCAAGA 471
Query 689 GAAAGAGAGTTT 700
||| || |||||
Sbjct 472 GAAGGAAAGTTT 483
Score = 222 bits (120), Expect = 9e-57
Identities = 210/251 (84%), Gaps = 16/251 (6%)
Strand=Plus/Plus
Query 452 AGATCAAGAGAAGGAAAGCTCAAAGC-TAGAAACCAATGGAATGTCTCCGTTGGAC-TCA 509
||||| | |||| || |||||||||| || ||| ||||||||| |||| |||| | ||
Sbjct 127 AGATC-A-AGAA-GAGAGCTCAAAGCTTA-AAAACAATGGAATACCTCCATTGG-CTTC- 180
Query 510 ATATCCGTAAAGACCAGGCAAGATCAGTTGTTTCTTGCGGT-TG-AAGAAAAAGATGGAG 567
| |||||| | |||| |||||||| | ||||| |||| | || ||| ||||||||||
Sbjct 181 -T-TCCGTAGATACCACGCAAGATCTGGTGTTTATTGC-TTGTGAAAG-TAAAGATGGAG 236
Query 568 ATCAAGAGAAAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTAGACTCTATTT 627
|| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 237 ATGAAGAGATAGAGAGCTCAAAGCTAGAAACCAATGGAATGTCTCCATTGGACTCTGTTT 296
Query 628 CCGTAGAGACCACACAAGATCA-GTTGTTTCTCGCAGGTGAAGGAAAAGAAGGAGATGAA 686
| |||||||| | |||||||| || |||||| | |||||||| |||||| |||||||||
Sbjct 297 CTTTAGAGACCGCGCAAGATCAAGT-GTTTCTTGAAGGTGAAGAAAAAGATGGAGATGAA 355
Query 687 GAGAAAGAGAG 697
|||||||||||
Sbjct 356 GAGAAAGAGAG 366
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94477425690
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5