BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493464 Length=864 Score E Sequences producing significant alignments: (Bits) Value AT4G14380.1 | Symbols: | unknown protein; Has 22 Blast hits to... 1103 0.0 > AT4G14380.1 | Symbols: | unknown protein; Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 18; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:8285766-8286772 FORWARD LENGTH=1007 Length=1007 Score = 1103 bits (597), Expect = 0.0 Identities = 746/815 (92%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 1 aaaaaaaaaaaaaaaGTTAAGTCTCTGAATGGCTTCTTTGCGGCAAAAGAAGAAGCAAAA 60 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 23 AAAAAAAAAAAAAAAG-TAAGTCTCTGAATGGCTTCGTTGCGGCAAAAGAAGAAGCAAAA 81 Query 61 TCCAGCGAAGAGGGCATGGAAAAACTTCACAAACATGGTGAAATCCAAATTCAGAGACAT 120 ||| ||||||||||||||||||||||| ||||||||||| || || || ||||||||||| Sbjct 82 TCCTGCGAAGAGGGCATGGAAAAACTTTACAAACATGGTCAAGTCGAAGTTCAGAGACAT 141 Query 121 AGAGATCGCTTCATCGGTCAGAGAATCAACAGCTCGTGTTC-TCAGGTTCATTTCTCGCC 179 ||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||| Sbjct 142 GGAGATCGCTTCATCGGTCAGAGAATCAACGGCTCGTG-TCTTCCGGTTCATTTCTCGCC 200 Query 180 GTCTCATCGTTCCTTTTAGAACAAGGTACCTCCAAAACAATAGCTACACGGACAAATACT 239 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 201 GTCTCATCGTTCCTTTTAGAACAAGGTACCTTCAAAACAATAGCTACACGGACAAATACT 260 Query 240 ACTACAGCCGGAACCAAAGTTCTCGGCAGTTTCTCAATTTT-TTCTCTCGATCTCTCACG 298 |||| |||||||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct 261 ACTATAGCCGGAACCAAAGTTCTCGACAGTTTCTCAACTTCATT-TCTCGATCTCTCACC 319 Query 299 AAACCAAAGCGTCGTCAATATGGATACGATGATGATTGTTACTCTCAAATCTATCAATAC 358 ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| Sbjct 320 AAACCAAAGCGTCGTCAGTATGGATACGATGATGAAT---ACTCTCAAATCTATCAATAC 376 Query 359 CAAAGCCAATCACGTGGCGAGGGGACGAGTGAGAGCAAAGAAAACGTTGTTAGGCGAA-A 417 |||||||||||||| || |||||||| |||| ||||||||| || ||||| || |||| | Sbjct 377 CAAAGCCAATCACGCGGTGAGGGGACAAGTGGGAGCAAAGAGAATGTTGTGAGACGAATA 436 Query 418 -A-GAG------GA-GAA-AC-AAGAAGAAGAAGAAGGGATGCCGGAGATTGCTGATTCG 466 | ||| || ||| | |||||||||||||||||||||||||||||||||||||| Sbjct 437 GAAGAGCAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGGGATGCCGGAGATTGCTGATTCG 496 Query 467 ATGGAAGATGCTTGGAGGAGAGTGGTGGCTGCATCGCCGCATTTGCAGGTTAACGAGAGA 526 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 497 ATGGAAGATGCTTGGAGGAGAGTGGTGGCTGCATCGCCTCATCTGCAGGTTAACGAGAGA 556 Query 527 GCCGACGAGTTCATCTACAAGTTTAGAGAAAGTATGAAGATGGAGAAGGAGAGGTCGTTT 586 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 557 GCCGACGAGTTCATCTACAAGTTTAGAGAAAGTATGAAGATGGAGAAAGAGAGGTCGTTT 616 Query 587 CTTGAATTCCAAGAAAGGTTAAAACGAAGTGCTTGATTGACCGATCACTCATGAGTGTGT 646 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 617 CTTGAATTCCAAGAAAGGCTAAAACGAAGTGCTTGATTGATCGATCACTCATGAGTGTGT 676 Query 647 TCCATGttcttcttctgatttctcttgattaaattttctaaagaactttgttttctcatt 706 ||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||||| Sbjct 677 TCCATGTTCTTCTTCTGATTTCTCTTGGTTGAATTTTTTAAAGAACTTGGTTTTCTCATT 736 Query 707 ctttcttctttGTTAAAAAATGGGGGTACTTTCAAAAGTGTTAACAAACtttttt-cttc 765 ||||||||||||||| ||||| | | | ||||| |||||||||||||||||||| || | Sbjct 737 CTTTCTTCTTTGTTACAAAATTCGAGAATTTTCAGAAGTGTTAACAAACTTTTTTTCTAC 796 Query 766 attttgtttttCCGATGTAATGTGAATACATATGG 800 ||| | |||||| ||||||||||||||||||||| Sbjct 797 ATTATATTTTTCTTATGTAATGTGAATACATATGG 831 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42146449333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5