BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493467
Length=2403
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14360.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 3725 0.0
AT3G23300.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1977 0.0
AT4G14358.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 165 2e-39
> AT4G14360.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:8267660-8271121
REVERSE LENGTH=2418
Length=2418
Score = 3725 bits (2017), Expect = 0.0
Identities = 2291/2420 (95%), Gaps = 31/2420 (1%)
Strand=Plus/Plus
Query 1 AACGACCTCCACCGATTTTAtctctctctctctctctctctctTCTTCACTTGCACTGTG 60
||||||||||||||| | |||||||||||||||||||||| | |||||||||| ||||
Sbjct 1 AACGACCTCCACCGA---T-TCTCTCTCTCTCTCTCTCTCTC-T-TTCACTTGCAGTGTG 54
Query 61 TCGCTTTGCTGCCTTCATTCCCATTCCACACG-A-ATCaaaaaaaGTTGGTCTCTTTCCT 118
|||||||||||||||||||| |||| |||||| | || ||||||||||||||||||||||
Sbjct 55 TCGCTTTGCTGCCTTCATTCTCATTTCACACGAAGATTAAAAAAAGTTGGTCTCTTTCCT 114
Query 119 AATTTAGAGGA-TACACAAACCAAACCCAGATCCGAGTCTCTCTCCCCATCTCCTTCTTT 177
|||||||| || | | ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 115 AATTTAGAAGAGT-GATAAACCAATCCCAGATCCGAGTCTCTCTCCCCATCTCCTTCTTT 173
Query 178 CTCTCTTTCGAATAACATTACACTGCGGTTTTTTGCC-TCGAGATCTGTCATTTTCTCTT 236
|||||||| ||||||| |||||||||||||||||| | ||||||||||||| ||||||
Sbjct 174 CTCTCTTTTGAATAAC---ACACTGCGGTTTTTTGCCTTTGAGATCTGTCATTGTCTCTT 230
Query 237 CCAAATCTAGAACC-TTACTTGGGTTGTATTCAAATATCTGTAACTAGTGAGAAATCATC 295
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 231 CCAAATCTAGAACCTTTACTTGGGTTGTATTCAAATATCTGTAACTAGTGAGAAATCATC 290
Query 296 AATTTATAAAACTGAAGTCTTCACTTAGTAGTCTGCATCCTTTAAGTCGGAACGTTGGAT 355
||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 291 AATTTTTAAAGCTGAAGTCTTCACTTAGTAGTCTGCATCCTTTAACTCGGAACGTTGGGT 350
Query 356 CTCCGTTTGGCTTTATCTCAAATAAGAAAGCAATGAAGGGAAGATCGGATGGAGGGCAAA 415
|||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct 351 CTCCGTTTGGCTTTATCTCAAATAAGAAGGCAATGAAAGGAAGATCAGATGGAGGGCAAA 410
Query 416 AGAAGCGGGTGATTGCTTTGGTTTGCGTTGCAGCGGTAGTTCTTGTTTTCGTATATCTGT 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 411 AGAAGCGGGTGATTGCTTTGGTTTGCGTTGCAGCGGTAGTTCTTGTTTTCGTATATCTGT 470
Query 476 TCTACGGCTCTTCTGATCATAGAGCATCGGCTATCGAATACGGGAGAAAACTCGGGTTGG 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 471 TCTACGGCTCTTCTGATCATAGAGCATCGGCTATCGAATACGGGAGAAAACTCGGGTTAG 530
Query 536 GTGGGGATGATGATGATACTAAACAGGATGATACTTCTAGCTCATTTGGTGTTGATGATG 595
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 531 GTGGGGATGATGATGATACTAAACAGGATGACACTTCTAGCTCATTTGGTGTTGATGATG 590
Query 596 GTTTCACGCCGAGAAGTTTTCCTGTGTGTGATGATCGGCATTCGGAGCTTATTCCTTGCT 655
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 591 GTTTCACTCCGAGAAGTTTTCCTGTGTGTGATGATCGACATTCGGAGCTTATTCCTTGCT 650
Query 656 TAGACCGGAATCTCATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATT 715
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 TAGATAGGAATCTTATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATT 710
Query 716 ATGAACGTCATTGTCCTCCTCCTGAAAGACGATTTAATTGCTTGATTCCTCCTCCAAATG 775
||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||
Sbjct 711 ATGAACGTCATTGTCCTCCTCCTGAGAGACGATTCAATTGCTTGATTCCGCCTCCTAATG 770
Query 776 GATATAAGGTTCCAATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATAC 835
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 GATATAAGGTTCCGATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATAC 830
Query 836 CTCATACTCATCTTGCTCATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATA 895
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 CTCATACTCATCTTGCACATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATA 890
Query 896 AGATTAATTTCCCAGGCGGAGGCACACATTTTCACTATGGGGCTGATAAGTATATTGCAT 955
||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 891 AGATTAATTTCCCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCAT 950
Query 956 CGATGGCAAATATGCTTAACTTTCCGAATAACGTTTTGAACAATGGTGGAAGGCTAAGGA 1015
||||||||||||||||||||| ||| || ||||| ||||||| ||||||||||||||||
Sbjct 951 CGATGGCAAATATGCTTAACTATCCTAACAACGTGCTGAACAACGGTGGAAGGCTAAGGA 1010
Query 1016 CAGTTTTTGATGTTGGTTGTGGTGTTGCGAGCTTTGGAGGTTATCTTTTATCATCAGATA 1075
| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1011 CGGTTTTCGATGTTGGTTGTGGTGTTGCGAGTTTTGGAGGTTATCTTTTATCATCGGATA 1070
Query 1076 TTCTGGCAATGTCCTTAGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTTG 1135
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071 TTCTCACAATGTCCTTGGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTTG 1130
Query 1136 AGAGAGGGATTCCTGCCTCCCTCGGTGTTTTAGGGACAAAGAGACTCCCATACCCAAGCA 1195
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1131 AGAGAGGGATTCCTGCCTCCCTCGGTGTTTTAGGGACAAAGAGGCTCCCATACCCAAGCA 1190
Query 1196 GATCTTTTGAACTTGCTCACTGTTCACGTTGCAGAATCGATTGGCTTCAAAGAGATGGGA 1255
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1191 GATCTTTTGAACTTTCTCACTGTTCACGTTGCAGAATCGATTGGCTACAAAGAGACGGGA 1250
Query 1256 TTCTTCTTCTCGAGCTAGACAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCTC 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 TTCTTCTTCTCGAGCTAGACAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCTC 1310
Query 1316 CAGAGGCATATGCACAAGATGAAGAGGACCTCCGAATCTGGAGAGAAATGAGTGCTCTTG 1375
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1311 CAGAGGCATATGCACAAGATGAAGAGGATCTTAGAATCTGGAGAGAAATGAGTGCTCTTG 1370
Query 1376 TGGAGCGTATGTGTTGGAAGATCGCGGCAAAAAGGAACCAAACTGTTATTTGGGAAAAAC 1435
||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||||
Sbjct 1371 TGGAGCGCATGTGTTGGAAGATCGCGGCAAAAAGGAATCAAACTGTTATTTGGCAGAAAC 1430
Query 1436 CTTTGACAAATGATTGTTATCTGGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGTT 1495
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1431 CTTTGACAAATGATTGTTATCTAGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGTT 1490
Query 1496 CTGATAATGATCCTGATGCTGTGTGGGGCGTAAACATGGAAGCCTGCATTACATCTTACA 1555
|||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1491 CTGATAATGACCCTGATGCTGTGTGGGGCGTAAACATGGAAGCTTGCATTACTTCTTACA 1550
Query 1556 GTGACCATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCGGCTCGGTTAACCT 1615
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1551 GTGACCATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCAGCTCGGTTAACCT 1610
Query 1616 CTCCTCCTCCTAGGCTTGCTGATTTTGGATATTCAACTGGCATGTTCGAGAAGGACACGG 1675
|||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1611 CTCCTCCTCCCAGACTTGCTGATTTTGGATATTCAACGGGCATGTTTGAGAAGGACACGG 1670
Query 1676 AACTTTGGAGGCAAAGAGTAGATACTTATTGGGATCTCTTGAGTCCTAGAATCGAATCAG 1735
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1671 AACTTTGGAGGCAGAGAGTAGATACTTATTGGGATCTCTTGAGTCCAAGAATCGAATCAG 1730
Query 1736 ATACAGTGAGGAACATAATGGACATGAAAGCAAGCATGGGCTCCTTTGCTGCTGCTCTGA 1795
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1731 ATACAGTGAGGAACATAATGGACATGAAAGCAAGCATGGGCTCTTTTGCTGCTGCTCTGA 1790
Query 1796 AAGAAAAAGATGTCTGGGTAATGAATGTTGTTCCTGAGGACGGACCTAACACGCTTAAAC 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 AAGAAAAAGATGTCTGGGTAATGAATGTTGTTCCTGAGGACGGACCTAACACGCTTAAAC 1850
Query 1856 TGATATATGACAGAGGTCTAATGGGCGCAGTTCATAGCTGGTGTGAAGCATTCTCGACAT 1915
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1851 TGATATATGACAGAGGTTTAATGGGCGCGGTTCATAGCTGGTGTGAAGCATTCTCGACAT 1910
Query 1916 ATCCGAGAACCTATGATCTCCTCCATGCTTGGGACATCATCTCGGATATCAATAAAAAAG 1975
|||| || || ||||||||||||||||||||||| || || ||||||||||| |||||||
Sbjct 1911 ATCCAAGGACATATGATCTCCTCCATGCTTGGGATATTATATCGGATATCAAGAAAAAAG 1970
Query 1976 GGTGTAGTGAGGTGGATTTGTTACTGGAGATGGATCGAATACTGCGCCCGAGCGGGTTTA 2035
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1971 GATGTAGTGAAGTGGATTTGTTACTGGAGATGGATCGAATACTGCGCCCGAGCGGGTTTA 2030
Query 2036 TAATCATAAGGGATAAACAGAGAGTGGTGGATTTGGTTAAGAAGTATCTAAAGGCATTGC 2095
||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 2031 TAATCATAAGGGATAAACAAAGAGTGGTGGATTTTGTGAAGAAGTATCTAAAGGCATTGC 2090
Query 2096 ATTGGGAAGAAGTAGGGACCAAGACAGATTCAGATTCAGATCAAGATTCAGACAATGTTA 2155
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2091 ATTGGGAAGAAGTAGGTACCAAGACAGACTCAGATTCAGATCAAGATTCAGACAATGTTG 2150
Query 2156 TATTCATTGTTCAGAAGAAGTTGTGGTTGACTAGTGAAAGCCTTAGAGATATGGAGTGAT 2215
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2151 TATTCATTGTCCAGAAGAAGCTGTGGTTGACTAGTGAAAGCCTTAGAGATATGGAGTGAT 2210
Query 2216 GAAATAAGCCACACCATACACAAACATTACGACCAATGATCATACAACCAACGAATTTCA 2275
|| |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 2211 GAG-TAAGCCACACGATACACAAAAATTACGACCAATGATCATACAACCAACAAATTTCA 2269
Query 2276 TTATTGTAG---CAACATTATTTATTAACGTTGtttttttatttttttAATTATTGT-TC 2331
||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2270 TTATTGTAGTAGCAACATTATTTATTAACGTTGTTTTTA-ATTTTTTTAATTATTGTATC 2328
Query 2332 TTTCTTATACATTCTTA---GTAATGTTGTTTGTATGATTTTGGTAGAGAAGA-----CT 2383
||||||| |||||||| || |||||||||||||||||||||||||||||| |
Sbjct 2329 TTTCTTA--CATTCTTATAAGTGATGTTGTTTGTATGATTTTGGTAGAGAAGAGAAGACA 2386
Query 2384 CGTATAAGTAAAGATCGATA 2403
|||||||||||||| |||||
Sbjct 2387 CGTATAAGTAAAGAACGATA 2406
> AT3G23300.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr3:8333025-8336146
FORWARD LENGTH=2335
Length=2335
Score = 1977 bits (1070), Expect = 0.0
Identities = 1606/1860 (86%), Gaps = 55/1860 (3%)
Strand=Plus/Plus
Query 388 ATGAAGGGAAGATCGGATGGAGGGCAA-AAGAAGCGGGTGATTGCT-TTGGTTTGCGTTG 445
|||| ||| ||||| || |||||| || || |||| |||||||| | || | |||||||
Sbjct 256 ATGAGGGGGAGATCAGAAGGAGGG-AAGAAAAAGCCGGTGATTG-TGTTACTCTGCGTTG 313
Query 446 CAGCGGTAGTTCTTGTTTTCGTATATCTGTTCTACGGCTCTTCTGATCATAGAGCATCGG 505
|| | ||||| |||||||| |||||||| |||| || || ||| | |||| | | |
Sbjct 314 CATCAGTAGTGCTTGTTTTTGTATATCTCTTCTTTGGTTCCTCTAACCATA-A--A---G 367
Query 506 CTATCGAATACGGGAGAAAACTCGGGTTGGGTGGGGATGATGATG--A-TACTAA-ACAG 561
|||| || || ||||| ||||| || |||||||| |||||||||| | |||||| | |
Sbjct 368 CTATTGAGTATGGGAGGAAACTTGGTTTGGGTGGTGATGATGATGATAGTACTAAGA-AA 426
Query 562 GATGATACTTCTAGCTC-----AT-TTG--G-TGTTG-A-TG-ATGGTTTCACGCCGAGA 609
||||| ||||||||||| || | | | ||| | | | |||||||||| || |||
Sbjct 427 GATGACACTTCTAGCTCTTTTTATGTAGAAGATGTAGTAGGGAATGGTTTCACTCCCAGA 486
Query 610 AGTTTTCCTGTGTGTGATGATCGGCATTCGGAGCTTATTCCTTGCTTAGACCGGAATCTC 669
|| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct 487 AGCTTTCCTGTGTGTGATGATCGACACTCGGAGCTTATTCCTTGCTTAGATAGGAATCTT 546
Query 670 ATATACCAAATGAGATTGAAGCTGGATTTGTCTTTGATGGAGCATTATGAACGTCATTGT 729
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 547 ATATACCAAATGAGATTGAAGCTTGATTTGTCTTTGATGGAGCATTATGAACGTCACTGT 606
Query 730 CCTCCTCCTGAAA-GACGATTTAATTGCTTGATTCCTCCTCC-AAATGGATATAAGGTTC 787
||||||||||||| || | ||||||||||||||||||||||| | || |||||| |||
Sbjct 607 CCTCCTCCTGAAAGGA-GGTTTAATTGCTTGATTCCTCCTCCTCCA-GGGTATAAGATTC 664
Query 788 CAATTAAATGGCCAAAAAGCAGAGATGAAGTGTGGAAAGTGAACATACCTCATACTCATC 847
|||| || ||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |
Sbjct 665 CAATCAAGTGGCCGAAAAGCAGAGACGAAGTTTGGAAAGTGAACATTCCTCATACTCA-C 723
Query 848 TT-GCTCATGAGAAGTCTGACCAAAACTGGATGGTTGTCAAAGGAGATAAGATTAATTTC 906
|| || |||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct 724 TTAGCGCATGAGAAGTCTGACCAAAACTGGATGGTTGTTAAAGGAGAGAAAATCAATTTC 783
Query 907 CCAGGCGGAGGCACACATTTTCACTATGGGGCTGATAAGTATATTGCATCGATGGCAAAT 966
|| || ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 784 CCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCATCAATGGCAAAT 843
Query 967 ATGCTTAACTTTCCGAATAACGTTTTGAACAATGGTGGAAGGCTAAGGACAGTTT-TTGA 1025
|||||||| |||||||| || |||||||||||||| |||||||| |||||| ||| ||||
Sbjct 844 ATGCTTAATTTTCCGAACAATGTTTTGAACAATGGGGGAAGGCTGAGGACA-TTTCTTGA 902
Query 1026 TGTTGGTTGTGGTGTTGCGAGCTTTGGAGGTTATCTT-TTATCATCAGATATTCTGGCAA 1084
|||||| ||||||||||| |||||||||||||||||| || ||||||| ||| || | |
Sbjct 903 TGTTGGCTGTGGTGTTGCTAGCTTTGGAGGTTATCTTCTT-GCATCAGAAATTATGACGA 961
Query 1085 TGTCCTTAGCTCCAAATGATGTGCATCAGAACCAAATCCAATTTGCTCTTGAGAGAGGGA 1144
|||| || || || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 962 TGTCTTTGGCACCTAATGATGTTCATCAGAACCAAATCCAATTTGCTCTTGAGAGAGGGA 1021
Query 1145 TTCCTGCCTCCCTCGGTGTTTTAGGGACAAAGAGACTCCCATACCCAAGCAGATCTTTTG 1204
||||||| | |||||| ||| ||||||| ||||| |||||||||||||||||||| ||||
Sbjct 1022 TTCCTGCATACCTCGGCGTTCTAGGGACCAAGAGGCTCCCATACCCAAGCAGATCCTTTG 1081
Query 1205 AACTTGCTCACTGTTCACGTTG-CAGAATCGATTGGCTTCAAAGAGATGGGATTCTTCTT 1263
|||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||
Sbjct 1082 AACTTGCTCACTGTTCACGTTGTC-GTATCGATTGGCTTCAAAGAGATGGTATTCTTCTT 1140
Query 1264 CTCGAGCTAGACAGAGTACTTAGACCTGGTGGTTATTTTGCATATTCATCTCCAGAGGCA 1323
|||||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||
Sbjct 1141 CTCGAGCTAGACAGGGTGCTAAGACCTGGTGGCTATTTTGCATATTCATCTCCAGAAGCA 1200
Query 1324 TATGCACAAGATGAAGAGGACCTCCGAATCTGGAGAGAAATGAGTGCTCTTGTGGAGC-G 1382
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |
Sbjct 1201 TATGCACAAGATGAAGAGGACCTCAGAATATGGAGAGAAATGAGTGCTCTTGTGG-GCCG 1259
Query 1383 TATGTGTTGGAAGATCGCGGCAAAAAGGAACCAAACTGTTATTTGGGAAAAACCTTTGAC 1442
||||||||||| ||| || ||||||||||| |||||||| |||||| |||||||||||||
Sbjct 1260 TATGTGTTGGACGATAGCTGCAAAAAGGAATCAAACTGTAATTTGGCAAAAACCTTTGAC 1319
Query 1443 AAATGATTGTTATCTGGAAAGAGAACCTGGAACTCAGCCTCCTCTTTGCCGTTCTGATAA 1502
||||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||| |
Sbjct 1320 AAATGATTGTTATTTGGGAAGAGAACCTGGAACCCAGCCTCCTCTTTGCAATTCTGACAG 1379
Query 1503 TGATCCTGATGCTGTGTGGGGCGTAAACATGGAAGCCTGCATTACATCT-TACAGTGACC 1561
||| ||||||||||||| || |||||||||||||| |||||||| || ||||||||||
Sbjct 1380 TGACCCTGATGCTGTGTATGGTGTAAACATGGAAGCATGCATTAC-TCAATACAGTGACC 1438
Query 1562 ATGACCACAAAACCAAGGGAAGTGGATTAGCTCCATGGCCGGCTCGGTTAACCTCTCCTC 1621
|||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct 1439 ATGACCACAAAACCAAGGGAAGTGGATTGGCTCCATGGCCAGCTCGATTAACCTCTCCTC 1498
Query 1622 CTCCTAGGCTTGCTGATTTTGGATATTCAACTGGCATGTTCGAGAAGGACACGGAA-CTT 1680
||||| |||| ||||| ||||| ||||| |||| ||| || |||||||| || ||| |||
Sbjct 1499 CTCCTCGGCTAGCTGACTTTGGCTATTCCACTGACATTTTTGAGAAGGATACAGAAACTT 1558
Query 1681 TGGAGGCAAAGAGTAGATACTTATTGGGATCTCTTGAGTCCTAGAAT-CGAATCAGATAC 1739
||||||| |||||||||||||||||||||||||||||||||| ||| | ||||||| ||
Sbjct 1559 -GGAGGCAGAGAGTAGATACTTATTGGGATCTCTTGAGTCCTAAAATTC-AATCAGACAC 1616
Query 1740 AGTGAGGAACATAATGGACATGAAAGCAAGCATGGGCTCCTTTGCTGCTGCTCTGAAAGA 1799
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1617 TGTAAGGAACATAATGGACATGAAAGCAAGCATGGGTTCCTTTGCTGCTGCTCTGAAAGA 1676
Query 1800 AAAAGATGTCTGGGTAATGAATGTTGTTCCTGAGGACGGACCTAACACGCTTAAACTGAT 1859
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct 1677 AAAAGATGTTTGGGTTATGAATGTTGTTCCTGAAGACGGACCAAACACGCTTAAACTAAT 1736
Query 1860 ATATGACAGAGGTCTAATGGGCGCAGTTCATAGCTGGTGTGAAGCATTCTCGACATATCC 1919
||| |||||||| || ||||| || |||||||||||||||||||| |||||||| || ||
Sbjct 1737 ATACGACAGAGGCCTGATGGGTGCTGTTCATAGCTGGTGTGAAGCGTTCTCGACTTACCC 1796
Query 1920 GAGAACCTATGATCTCCTCCATGCTTGGGACATCATCTCGGATATCAATAAAAAAGGGTG 1979
||| || || ||| | |||||||| ||||||||||| || |||||||| || | ||| ||
Sbjct 1797 GAGGACTTACGATTTACTCCATGCCTGGGACATCATATCTGATATCAAGAAGAGAGGTTG 1856
Query 1980 TAGTG-AGGTGGATTTGTTACTGGAGATGGATCGAATACTGCGCCCGAGCGGGTTT-ATA 2037
|| | || | ||||| | ||||||||||||| ||||| || || ||||| ||| |||
Sbjct 1857 CAGCGCAGAAG-ATTTGCTGTTGGAGATGGATCGTATACTTCGTCCAAGCGG-TTTCATA 1914
Query 2038 ATCATAAGGGATAAACAGAGA-GTGGTGGAT-TTGGTTAAGAAGTATCTAAAGGCATTGC 2095
|||||||||| ||||| | || || || ||| | ||||||||||| ||||| ||||
Sbjct 1915 CTCATAAGGGACAAACA-ATCCGTAGTCGACCTTG-TGAAGAAGTATCTCAAGGCTTTGC 1972
Query 2096 ATTGGGAAGAAGTAGGGACCAAGACAGATTCAGATTCAGATCAAGATTCAGACAATGTTA 2155
||||||||| ||| | |||||||||| || || ||||| ||||| || |||||||| |
Sbjct 1973 ATTGGGAAGCAGTTGAAACCAAGACAGCCTCGGAATCAGACCAAGACTCGGACAATGTGA 2032
Query 2156 TATTCATTGTTCAGAAGAAGTTGTGGTTGACTAGTGAAAGCCTTAGAGATATGGAGTGAT 2215
|| ||||||| |||||||| |||||||||| ||||||||||| |||||| |||||||||
Sbjct 2033 TACTCATTGTCCAGAAGAAACTGTGGTTGACAAGTGAAAGCCTCAGAGATTTGGAGTGAT 2092
> AT4G14358.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein
match is: nitrate transporter2.5 (TAIR:AT1G12940.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
| chr4:8267496-8267825 FORWARD LENGTH=330
Length=330
Score = 165 bits (89), Expect = 2e-39
Identities = 137/157 (87%), Gaps = 15/157 (10%)
Strand=Plus/Minus
Query 2259 ACAACCAACGAATTTCATTA-T-T-GTAGCAACATTATTTATTAACGTTGtttttttatt 2315
||||||||| |||||||||| | | |||||||||||||||||||||||||||||| |||
Sbjct 330 ACAACCAACAAATTTCATTATTGTAGTAGCAACATTATTTATTAACGTTGTTTTTA-ATT 272
Query 2316 tttttAATTATTGT-TCTTTCTTATACATTCTTA---GTAATGTTGTTTGTATGATTTTG 2371
|||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||
Sbjct 271 TTTTTAATTATTGTATCTTTCTTA--CATTCTTATAAGTGATGTTGTTTGTATGATTTTG 214
Query 2372 GTAGAGAAGA-----CTCGTATAAGTAAAGATCGATA 2403
|||||||||| | |||||||||||||| |||||
Sbjct 213 GTAGAGAAGAGAAGACACGTATAAGTAAAGAACGATA 177
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119326695465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5