BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493473 Length=2699 Score E Sequences producing significant alignments: (Bits) Value AT4G14330.1 | Symbols: | P-loop containing nucleoside triphosp... 4159 0.0 > AT4G14330.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:8244194-8247444 FORWARD LENGTH=2802 Length=2802 Score = 4159 bits (2252), Expect = 0.0 Identities = 2539/2678 (95%), Gaps = 18/2678 (1%) Strand=Plus/Plus Query 1 ATTTCAATTTCACTCTTTCGAAAGCTTGAAACTTTTTCAACAATGGCACCGACACCATCA 60 ||||||||||||||||||||||| ||| | |||||||||||||||||||||||| Sbjct 1 ATTTCAATTTCACTCTTTCGAAA-CTT----C---TTCAACAATGGCACCGACACCATCT 52 Query 61 TCTTCAAGATCAAATCAAACCCAATACACCTTAATCAGAACTCCACAAACCAAACAACGT 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 53 TCTTCAAGATCAAATCAAACTCAATACACCTTAATCAGAACTCCACAAACAAAACAACGT 112 Query 121 CTCAATTTCCACTCGAAAACCCCAAACCCAGAAGGATCTAAAGATCCAACACCACCGGAG 180 |||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct 113 CTCAATTTCCACTCAAAAACCCCAAACCCAGACGGATCTAAAGATCCATCTCCACCGGAG 172 Query 181 CATCCAGTTGAAGTAATCGGCCGGATCCGAGATTACCCAGATCGAAAAGAGAAAACTTCT 240 |||||||||||||||||||||||||||||||||||||| || || ||||||||| | || Sbjct 173 CATCCAGTTGAAGTAATCGGCCGGATCCGAGATTACCCTGACCGGAAAGAGAAATCACCT 232 Query 241 TCGATCTTGCAAGTTAACACAGATAATCAAACGGTACGAGTCAGAGCTGATATTGGGTAC 300 |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 233 TCGATCTTACAAGTCAACACAGATAATCAAACGGTACGAGTCAGAGCTGATGTTGGGTAC 292 Query 301 AGAGATTTCACTCTTGACGGTGTTTCTTTCTCGGAGCAAGAAGGTCTTGAAGAGTTTTAC 360 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 293 AGAGACTTCACACTCGACGGTGTTTCTTTCTCGGAGCAAGAAGGTCTTGAAGAGTTCTAC 352 Query 361 AAGAAGTTTATAGAAGAGAGGATTAAAGGTGTCAAAGTTGGGAATAAATGCACGATTATG 420 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 353 AAGAAGTTTATAGAAGAGAGGATTAAAGGAGTGAAAGTTGGGAATAAATGCACGATTATG 412 Query 421 ATGTATGGACCTACTGGTGCTGGAAAGAGTCATACTATGTTTGGTTGTGGCAAGGAGCCC 480 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 413 ATGTATGGACCTACTGGTGCTGGAAAGAGTCATACTATGTTTGGTTGTGGGAAAGAGCCT 472 Query 481 GGGATTGTGTATCGGTCTTTGCGGGATATTTTGGGTGATTCGGATCAAGATGGTGTTACT 540 |||||||||||||| |||||| | ||||| ||||| ||||| |||||||||||||||||| Sbjct 473 GGGATTGTGTATCGTTCTTTGAGAGATATATTGGGAGATTCTGATCAAGATGGTGTTACT 532 Query 541 TTTGTTCAAGTTACTGTT-TTGGAGGTTTATAATGAGGAGATTTATGATCTTCTTTCGAC 599 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 533 TTTGTTCAAGTTACTGTTCTT-GAGGTTTATAATGAGGAGATTTATGATCTTCTTTCGAC 591 Query 600 TAATAGTAGTAACAATTTAGGGATTGGTTGGCCTAAAGGAGGAAGCACTAAGGTGAGGCT 659 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 592 TAATAGTAGTAACAATTTAGGTATTGGTTGGCCTAAAGGAGCAAGCACTAAGGTGAGGCT 651 Query 660 TGAAGTAATGGGCAAAAAGGCGAAAAACGCGACCTTTATTTCAGGGACAGAGGCTGGAAA 719 |||||||||||| ||||||||||||||||| | |||||||| |||||||||||||| || Sbjct 652 TGAAGTAATGGGGAAAAAGGCGAAAAACGCAAGTTTTATTTCTGGGACAGAGGCTGGGAA 711 Query 720 GATCTCTAAAGAAATTGTCAAAGTGGAGAAACGGAGAATTGTGAAGAGTACACTTTGCAA 779 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 712 GATTTCTAAAGAAATTGTCAAAGTGGAGAAACGGAGAATTGTGAAGAGTACACTTTGTAA 771 Query 780 TGAAAGAAGTTCCCGGAGTCACTGCATTATCATACTTGATGTGCCAACTGTTGGTGGAAG 839 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 772 CGAAAGAAGTTCTCGGAGTCACTGCATTATCATACTTGATGTGCCAACTGTTGGGGGAAG 831 Query 840 ATTGATGCTTGTTGACATGGCTGGTTCTGAAAATATAGACCAAGCTGGGCAGACTGGATT 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 832 ATTGATGCTTGTTGACATGGCTGGTTCTGAAAATATAGACCAAGCTGGGCAGACTGGATT 891 Query 900 TGAAGCTAAGATGCAAACAGCTAAGATCAACCAGGGAAATATAGCACTGAAGCGAGTTGT 959 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 892 TGAAGCTAAGATGCAAACTGCTAAGATCAACCAGGGAAATATTGCACTGAAGCGAGTTGT 951 Query 960 GGAATCTATAGCAAATGGAGATTCTCACGTACCCTTTAGAGACAGCAAGCTGACGATGCT 1019 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 952 GGAATCTATAGCAAATGGAGATTCTCATGTACCCTTTAGAGACAGCAAGCTGACCATGCT 1011 Query 1020 TCTTCAGGACTCTTTTGAAGATGACAAGTCAAAGATTCTAATGATCCTGTGTGCAAGCCC 1079 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1012 TCTCCAGGACTCTTTTGAAGATGACAAGTCAAAGATTCTAATGATCCTGTGTGCGAGCCC 1071 Query 1080 GGATCCAAAGGAAATGCACAAGACTCTCTGTACTCTAGAGTATGGGGCAAAAGCAAAGTG 1139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1072 GGATCCAAAGGAAATGCACAAGACTCTCTGTACTCTAGAGTATGGGGCAAAAGCAAAGTG 1131 Query 1140 TATAGTTCGTGGGTCTCATACTCCAAACAAAGATAAGTATGGGGGTGATGAGTCTGCCTC 1199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1132 CATAGTTCGTGGGTCTCATACTCCAAACAAAGATAAGTATGGGGGTGATGAGTCTGCTTC 1191 Query 1200 TGCTGTGATTTTGGGATCAAGAATAGCTGCCATGGATGAGTTTATTCTCAAACTCCAGTC 1259 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1192 TGCTGTGATTTTGGGATCAAGAATAGCTGCCATGGATGAGTTCATTATCAAACTCCAGTC 1251 Query 1260 CGagaagaagcaacaagaaaaagaaaggaacgaggcacaaaagctgctgaagaagaagga 1319 |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1252 TGAGAAGAAGCAAAAAGAAAAAGAAAGGAATGAGGCACAAAAGCAGCTGAAGAAGAAGGA 1311 Query 1320 agaggaagTTGCTGCTTTAAGATCTCTTTTAACACAGAGGGAAGCATGTGCTACCAATGA 1379 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1312 AGAGGAAGTTGCTGCTTTAAGATCTCTTTTAACACAGAGGGAAGCTTGTGCTACCAATGA 1371 Query 1380 AGAGGAGATAAAAGAGAAAGTAAACGAGAGAACCCAGCTTTTGAAATCGGAGCTAGAGAA 1439 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct 1372 AGAGGAGATAAAAGAGAAAGTAAACGAGAGAACCCAGCTTTTGAAGTCGGAACTAGATAA 1431 Query 1440 GAAACTTGAAGAATGCCGAAGAATGGCTGAGGAATTTGTTGAGATGGAGAGAAGGAGAAT 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1432 GAAACTTGAAGAATGCCGAAGAATGGCTGAGGAATTTGTTGAGATGGAGAGAAGGAGAAT 1491 Query 1500 GGAGGAAAGGATTGTGCAGCAGCAAGAGGAACTGGAGATGATGAGGAGACGGTTGGAGGA 1559 |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1492 GGAGGAAAGGATAGTTCAGCAGCAAGAGGAACTGGAGATGATGAGGAGACGGTTAGAGGA 1551 Query 1560 AATTGAGATTGAGTTTCGGCGCTCAAGGGATGGAGGCAGTATTGATGAAACTAGTGGGTT 1619 ||| ||| ||||||| || ||||||| ||||||| ||| ||||||||||||||||||| Sbjct 1552 AATCGAGGTTGAGTTCCGCCGCTCAA---ATGGAGGAAGTGTTGATGAAACTAGTGGGTT 1608 Query 1620 TGCCAAAAGACTTAGAAGTCTTTACTCTGATGATGATCCTGGTATGGTGAAGTCAATGGA 1679 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1609 TGCCAAAAGACTCAGGAGTCTTTACTCTGATGATGATCCTGGTATGGTGAAGTCAATGGA 1668 Query 1680 CCTTGACATGGGTGATCCAGAACCAGTCAAGCAAGTATGGGGAGCTGTTTCACACCAATC 1739 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1669 CCTTGACATGGGTGATCCAGAACCTGTCAAGCAAGTGTGGGGAGCTGTTTCACACCAATC 1728 Query 1740 AAGCAACACAATTAGCAGCAATTTCACTAACATTTTGCAACCAAAGCCTTCAGAGAATAT 1799 ||||||||| ||||| ||||| ||||||||| |||||||||| ||||||||||||||||| Sbjct 1729 AAGCAACACTATTAGTAGCAACTTCACTAACCTTTTGCAACCGAAGCCTTCAGAGAATAT 1788 Query 1800 GCTTACACAGATGTATCCTGACCGGGTATGCTTGAGCACTGTCTTTGAAGAAGAAGAGGT 1859 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1789 GCTTACACAGATGTATCCTGACCGGGTATGCTTGAGCACTGTCTTTGAAGAAGAAGAAGT 1848 Query 1860 TGAAGAAGAGGAAGAAAAAGTGATAGTCGAGGATAAAAGCATCTGCTTGATAACAACACC 1919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1849 TGAAGAAGAGGAAGAAAAAGTGATAGTCGAGGATAAAAGCATCTGCTTGATAACAACACC 1908 Query 1920 AATGCCTAGTTTGAACTCTGAAGGTTTGGGTAAAGAGAACTGTTTCAACGGTGCAGATGA 1979 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1909 AATGCCTAGTTTGAACTCTGAAGGTTTGGGTAAAGAGAACTGCTTCAACGGTGCAGATGA 1968 Query 1980 CAAGGAATCAGCCTCGTCTAGAAGGTTGAGAATTCAAAACATTTTCACCCTTTGTGGCAA 2039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1969 CAAGGAATCAGCCTCGTCTAGAAGGTTGAGAATTCAAAACATTTTCACCCTTTGTGGCAA 2028 Query 2040 TCAGAGAGAGCTGTCTCAACACAGTGGGCAAGAGGAGGACCAAGCCAATACTGCATCACC 2099 ||||||||||||||||||||||||||| || |||||||| |||||||||| ||||||||| Sbjct 2029 TCAGAGAGAGCTGTCTCAACACAGTGGACAGGAGGAGGATCAAGCCAATATTGCATCACC 2088 Query 2100 TGTTAAGAAAGACAATCAGCTGTTTTCTATAACGAATAAGGCCGAAGCACTAGCAGTGGA 2159 || |||||||||||||||| | |||||||| |||||||||||||||||||||||||| || Sbjct 2089 TGATAAGAAAGACAATCAGTTCTTTTCTATTACGAATAAGGCCGAAGCACTAGCAGTAGA 2148 Query 2160 AGGAGCAAAGGAAAACAATATCTCAGTCGATGAAAGGAAAAACGTTCAGATAGATATCTA 2219 || |||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||| Sbjct 2149 AGAAGCAAAGGAAAACAATATCTCAGTCGATCAAAGGGAAAACGGTCAGCTAGATATCTA 2208 Query 2220 TGTTAAATGGGAAACAACAGCTGATAACCCTCGAAAGCTCATAACAACACTGAGGGTTAC 2279 |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct 2209 TGTTAAATGGGAAACAGCTGCTGATAACCCTCGAAAGCTCATAACAACACTGAGAGTTAC 2268 Query 2280 AAAGGACGCAACACTAGCTGACTTGAGGAAGCTTATTGAGATCTACCTTGGATCTGATAA 2339 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2269 AAAGGATGCAACACTAGCTGACTTGAGGAAGCTTATTGAGATCTACCTTGGATCTGATAA 2328 Query 2340 TCAGGCTTTTACCTTTCTCAAGCTCGGGGAACCATGTGGAGCTCAAGTGGCAAAGGAGAA 2399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2329 TCAGGCTTTTACCTTTCTCAAGCTCGGGGAACCATGTGGAGCTCAAGTGGCAAAGGAGAA 2388 Query 2400 AGAATCAACAGTTCAAGCGACGAGCCTACCTTTCTGCAACGGACACGCTTACCTCGCCAC 2459 |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| Sbjct 2389 AGAATCAACAGTTCAAGCTACGAGCCTACCTCTCTGCAACGGACACGCATACCTCGCCAC 2448 Query 2460 TTTGAGACCGGGAAAGAGCTCACAACTTCAAAGTCTTCCACCGGCAAGTCCACTTCCTCT 2519 ||||||||| |||||||||||||||| | ||||||||| ||| ||||| |||||||| || Sbjct 2449 TTTGAGACCAGGAAAGAGCTCACAACATAAAAGTCTTCAACCTGCAAGCCCACTTCCACT 2508 Query 2520 -AACTCCCATTGAAAACAAGATGC---TTAGCCCCATCTCAAAAGTGACACCGAACCACC 2575 || |||||| ||||||| |||| ||| ||||||||||||||||||||||||||| | Sbjct 2509 TAA-TCCCATAGAAAACATGATGGAAGTTACCCCCATCTCAAAAGTGACACCGAACCATC 2567 Query 2576 AAGTTGATGAATTTTCATCACCCATTCTCGCAGCTCATCTCAGCTCCACTCCATTCATCA 2635 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 2568 AAGTTGATGAATTTTCATCACCCAATCTCGTAGCTCATCTCAGCTCCACTCCATTCATCA 2627 Query 2636 CTCTGAGAAGACATTAGTCACTATGTCTTCTTTTGTCT 2673 |||| |||||||||||||| ||||||||| |||| ||| Sbjct 2628 CTCTCAGAAGACATTAGTCGCTATGTCTTGTTTTCTCT 2665 Score = 67.6 bits (36), Expect = 6e-10 Identities = 38/39 (97%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 2661 TCTTCTTTTGTCTGTCCAAAGGTAGCTTTTGAAATATGT 2699 |||||||||||||||||||||||||||||||||| |||| Sbjct 2668 TCTTCTTTTGTCTGTCCAAAGGTAGCTTTTGAAAGATGT 2706 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 134046071696 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5