BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg493502

Length=689
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G14100.1 | Symbols:  | transferases, transferring glycosyl g...  1018    0.0  
  AT4G14090.1 | Symbols:  | UDP-Glycosyltransferase superfamily p...   244    6e-64


> AT4G14100.1 | Symbols:  | transferases, transferring glycosyl 
groups | chr4:8120718-8122417 FORWARD LENGTH=781
Length=781

 Score = 1018 bits (551),  Expect = 0.0
 Identities = 646/692 (93%), Gaps = 5/692 (1%)
 Strand=Plus/Plus

Query  1    ACACATGGCTTTTAGACGACCACTCATAATAATCGTTATCTTCATCGTT-T-TAACCGCC  58
            |||||||||||||||||||||||||||| ||||||||||||||||  || | ||||||||
Sbjct  28   ACACATGGCTTTTAGACGACCACTCATAGTAATCGTTATCTTCAT--TTATATAACCGCC  85

Query  59   GGCGTAAAAATCGCCACCGCGGATGAGCCGGTTCCGACGTCATGGCCGCACCAGTTCCAC  118
            ||||| ||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct  86   GGCGTGAAAATCGCCGCCGCGGATGAGCCGGTGCCGACGCCATGGCCACACCAGTTCCAC  145

Query  119  GCGTTACTGTTCATGAATTACTCCGGCGATCTCTCGATGATCGACCTTTGGTACGACTGG  178
            ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  146  GCGCTAATGTTCATGAATTACTCCGGCGATCTCTCGATGATCGACCTTTGGTACGACTGG  205

Query  179  ACCAACGGTCGTAATTTCAATATCATCCAGGAGCAGCTCGGTGGGATTACCTACGACCTT  238
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  206  ACCAACGGTCGTAATTTCAATATCATCCAGGAGCAGCTCGGTGGTATTACCTACGACCTT  265

Query  239  GAATGGAACAATGGTACCTCCTTCATCTACTCGCTCGACGAGTCAAAATCGTGCCGCTCC  298
            ||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||||||
Sbjct  266  GAATGGAACAATGGTACTTCCTTCTTTTACACGCTCGACGAGTCAAAATCGTGCCGCTCC  325

Query  299  GCTCAGCTCGAGGTTGGAATTCTGCGACCAAACTGGCTAGATGGAGCCAAGTATCTAGGT  358
            | |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct  326  GGTCAGCTCGAGGTTGGAATACTGCGACCAAACTGGCTAGATGGAGCCAAGTACCTTGGT  385

Query  359  CaaaaaaaTGTGAGTGGGTTTCTTTGCAATGTGTGGGAGAAAGTGGACTTTATATGGTAC  418
            ||| | || |||||||||||||| |||||||| |||||||| || |||||||||||||||
Sbjct  386  CAACAGAACGTGAGTGGGTTTCTCTGCAATGTATGGGAGAAGGTAGACTTTATATGGTAC  445

Query  419  TATGAAGATGTTGTAACCAAGAGACCCGTGCAATGGATCTTCTATACAGGGAGGGAAGCT  478
            ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct  446  TATGAAGATGTTGAAACCAAGAGACCCGTGCAATGGATATTCTATACAGGGAGGGAGGCT  505

Query  479  CATGTGATGACATACGAGGTTGGTGCGGTCCTAGATGATGAGAAATGGCAGGCGCCGGTT  538
            ||| | |||||||||||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct  506  CATATAATGACATACGAGGTAGGTGCGGTCCTAGAGGATGAGAAATGGCAAGCACCGGTT  565

Query  539  TATTGTTTCAACAAAGAGAAGAAGGGTTTATCTACTAAGAGAGCTTTGAGAGAATTTAAA  598
            |||||||||||||||||||||||| |||| ||||| ||| |||||||||| |||||||||
Sbjct  566  TATTGTTTCAACAAAGAGAAGAAGAGTTTGTCTACAAAGGGAGCTTTGAGTGAATTTAAA  625

Query  599  GGATACAAAGAAAAGGCTGCTTTGTAATGTTAATTAACGAGACCTTCTTTTCTTCTAGTT  658
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  626  GGATACAAAGAAAAGGCTGCTTTGTAATGTTAATTAACGAGACCTTCTTTTCTTCTAGAT  685

Query  659  GATCAATCAG-AGGAGCACAAGAGTGAATAAA  689
            || ||||||| ||||| |||||||||||||||
Sbjct  686  GACCAATCAGGAGGAGTACAAGAGTGAATAAA  717


> AT4G14090.1 | Symbols:  | UDP-Glycosyltransferase superfamily 
protein | chr4:8122188-8123835 REVERSE LENGTH=1648
Length=1648

 Score =  244 bits (132),  Expect = 6e-64
 Identities = 155/166 (93%), Gaps = 1/166 (1%)
 Strand=Plus/Minus

Query  525   GGCAGGCGCCGGTTTATTGTTTCAACAAAGAGAAGAAGGGTTTATCTACTAAGAGAGCTT  584
             |||| || |||||||||||||||||||||||||||||| |||| ||||| ||| ||||||
Sbjct  1648  GGCAAGCACCGGTTTATTGTTTCAACAAAGAGAAGAAGAGTTTGTCTACAAAGGGAGCTT  1589

Query  585   TGAGAGAATTTAAAGGATACAAAGAAAAGGCTGCTTTGTAATGTTAATTAACGAGACCTT  644
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1588  TGAGTGAATTTAAAGGATACAAAGAAAAGGCTGCTTTGTAATGTTAATTAACGAGACCTT  1529

Query  645   CTTTTCTTCTAGTTGATCAATCAG-AGGAGCACAAGAGTGAATAAA  689
             |||||||||||| ||| ||||||| ||||| |||||||||||||||
Sbjct  1528  CTTTTCTTCTAGATGACCAATCAGGAGGAGTACAAGAGTGAATAAA  1483



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 33355473608


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5