BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493503
Length=1620
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14080.1 | Symbols: MEE48 | O-Glycosyl hydrolases family 17 ... 2309 0.0
AT3G23770.1 | Symbols: | O-Glycosyl hydrolases family 17 prote... 852 0.0
> AT4G14080.1 | Symbols: MEE48 | O-Glycosyl hydrolases family 17
protein | chr4:8118537-8120358 REVERSE LENGTH=1663
Length=1663
Score = 2309 bits (1250), Expect = 0.0
Identities = 1531/1660 (92%), Gaps = 46/1660 (3%)
Strand=Plus/Plus
Query 1 ATCTTAAAATCACAATCTGATCATCACCAACACATTG-----C--A--A-AC-CAAACAC 49
|||||||||||||| |||||||||||||||||||||| | | | || |||||||
Sbjct 1 ATCTTAAAATCACATTCTGATCATCACCAACACATTGCAAACCAAACCAGACACAAACAC 60
Query 50 AAAGACATGTCTCTTCTTGCTTTCTTCCTCTTCACCCTCCTCGTCTTTTCAAGTTCATGT 109
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 61 AAAGACATGTCTCTTCTTGCTTTCTTCCTCTTCACCATCCTTGTCTTTTCAAGTTCATGT 120
Query 110 TGTTCCGCGGCTCGGTTCCAAGGGCATAAGTACATGCAGAGGAAAACAATGCTAGATTTG 169
|||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 121 TGTTCCGCAACTCGGTTCCAAGGGCACAGGTACATGCAGAGGAAAACAATGCTAGATTTG 180
Query 170 GCTAGCAAGATTGGTATCAACTATGGAAGACA-AGGAAACAACCTCCCATCTCCTTACCA 228
|||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||
Sbjct 181 GCTAGCAAGATTGGTATCAACTATGGAAGA-AGAGGAAACAACCTCCCATCTCCATATCA 239
Query 229 ATCCATCAACTTCATCAAATCCATCAAAGCTGGTCATGTCAAGCTCTATGACGCTGATCC 288
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 240 ATCCATCAACTTCATCAAATCTATCAAAGCTGGTCATGTCAAGCTCTATGACGCCGATCC 299
Query 289 AGAGAGTCTCACACTCCTCTCTCAAACCAATCTCTACGTCACCATAACAGTCCCTAACCA 348
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 300 AGAGAGTCTCACACTCCTCTCTCAAACCAATCTCTACGTCACCATAACCGTCCCTAACCA 359
Query 349 CCAGATCACCTCACTCAGCTCTAACCAAACCACAGCTGACGAATGGGTCAGAACCAATAT 408
||| |||||| | ||||||||||||||||||| ||||||||||||||||||||| || ||
Sbjct 360 CCAAATCACCGCCCTCAGCTCTAACCAAACCATAGCTGACGAATGGGTCAGAACTAACAT 419
Query 409 CCTCCCTTACTATCCACAAACACAAATCCGCTTTGTCCTCGTTGGAAACGAAATACTAAG 468
|||||||||||||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct 420 CCTCCCTTACTATCCACAAACACAAATCCGTTTTGTCCTTGTCGGAAACGAAATCCTCAG 479
Query 469 CTATAATTAC-GGGAATGTCTCGGCGAACCTTGTACCTGCGATGCGCAAAATCGTGAATT 527
||| |||| | ||||||||||| | ||| |||||||| ||||||||||||||||| || |
Sbjct 480 CTACAATT-CTGGGAATGTCTCTGTGAATCTTGTACCGGCGATGCGCAAAATCGTTAACT 538
Query 528 CTCTCAGACTT-CATGGGATTCACAATATCAAAGTCGGGACACCTCTTGCCATGGATTCT 586
| |||||| || |||||||||||||| |||||||| ||||||||||| || |||||||||
Sbjct 539 CACTCAGA-TTACATGGGATTCACAACATCAAAGTTGGGACACCTCTAGCTATGGATTCT 597
Query 587 CTCCGGTCTTCCTTTCCTCCTTCGAACGGAACATTCCGGGAAGAAATCACCGGACCGGTG 646
|||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 598 CTCCGGTCGTCGTTTCCTCCATCGAACGGAACATTCCGGGAAGAAATCACCGGACCGGTG 657
Query 647 ATGTTACCGTTGCTGAAGTTTCTTAACGGAACAAACTCTTACTTCTTCCTCAATGTTCAT 706
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 658 ATGTTACCGTTGCTGAAGTTTCTCAACGGAACAAACTCTTACTTCTTCCTTAATGTTCAT 717
Query 707 CCTTACTTCCGTTGGTCAAAAAATCCCATGAACACTAGTTTGGATTTTGCTCTGTTCCAA 766
||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||
Sbjct 718 CCTTACTTCCGTTGGTCAAGAAACCCCATGAACACCAGTTTGGATTTTGCTCTGTTCCAA 777
Query 767 GGTA-ACTCAACCTATACCGATCCTCAAACCGGTTTGGTTTATCGTAATCTTCTAGACCA 825
|| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 778 GG-ACACTCAACCTATACCGATCCTCAAACCGGTTTGGTTTACCGTAATCTTCTAGACCA 836
Query 826 AATGTTGGATTCGGTTCTCTTTGCTATGACCAAACTCGGTTACCCACATATGCGCCTCGC 885
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 837 AATGTTGGATTCGGTTCTCTTCGCCATGACCAAACTCGGTTATCCACATATGCGCCTCGC 896
Query 886 GATCTCCGAAACCGGATGGCCTAATTTCGGTGACATCGACGAAACCGGTGCCAACATTCT 945
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 897 GATCTCTGAAACCGGATGGCCTAATTTCGGTGACATCGACGAAACCGGAGCCAACATTCT 956
Query 946 CAACGCGGCTACCTATAACCGGAATCTGATCAAGAAGATGACCGCAAGTCCACCAATCGG 1005
|||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct 957 CAACGCAGCTACCTATAACCGTAATCTGATCAAGAAGATGAGCGCAAGTCCTCCAATCGG 1016
Query 1006 TACTCCATCTAGACCCGGTTTACCTATACCTACATTTGTTTTCTCCTTATTCAACGAAAA 1065
||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1017 TACACCATCAAGACCCGGTTTACCAATACCGACATTTGTTTTCTCCTTATTCAACGAAAA 1076
Query 1066 CCAGAAATCCGGTCCGGGAACACAAAGACATTGGGGAATCTTGCATCCCGACGGTTCACC 1125
||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1077 CCAGAAATCCGGTTCGGGGACACAGAGACATTGGGGAATCTTGCATCCCGACGGTTCACC 1136
Query 1126 AATCTACGACATTGATTTCACCGGTCAAAAACCCTTAACCGGTTTCAACCCGTTACCTAA 1185
|||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1137 AATCTACGACGTAGATTTCACCGGTCAAACACCCTTAACCGGTTTCAACCCGTTACCTAA 1196
Query 1186 ACCGACGAACAACGTTCCCTACAAAGGTCAAGTGTGGTGCGTACCAGTCGAAGGCGCCAA 1245
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1197 ACCGACGAACAACGTTCCTTACAAAGGTCAAGTGTGGTGCGTACCAGTCGAAGGAGCCAA 1256
Query 1246 CGAGACTGAGCTTGAAGAAACTTTGAGGATGGCTTGTGCCCAAAGCAACACCACTTGTGC 1305
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1257 CGAGACTGAGCTTGAAGAAACATTGAGGATGGCTTGTGCCCAAAGCAACACCACTTGTGC 1316
Query 1306 GGCTTTAGCTCCTGGGAGAGAATGTTACGAGCCGGTCTCTATTTATTGGCATGCAAGCTA 1365
||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 1317 AGCTTTAGCTCCTGGGAGAGAATGTTACGAACCAGTCTCCATTTATTGGCATGCAAGCTA 1376
Query 1366 CGCGCTTAGCTCGTACTGGGCTCAGTTTCGTAACCAAAGCATTCAATGTTACTTCAATGG 1425
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1377 CGCGCTTAATTCGTACTGGGCTCAGTTTCGTAACCAAAGCATTCAATGTTTCTTCAATGG 1436
Query 1426 ATTGGCTCATGAGACAACGACCAACCCTGGAAATGATCGTTGCAAGTTTCCGAGCGTTAC 1485
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 ATTGGCTCATGAGACAACAACCAACCCTGGAAATGATCGTTGCAAGTTTCCGAGCGTTAC 1496
Query 1486 TCTGTGAGGA---CTTGAGGAGGAAGA-AGAT-AT-A----TG-ATTA-----A-AGCTT 1528
|||||||||| |||||||| ||||| | || || | || |||| | | ||
Sbjct 1497 TCTGTGAGGAGGACTTGAGGAAGAAGACACATGATTAAAGCTGGATTATTCGTATAACTC 1556
Query 1529 GAT-TA-TTCGT-AT-TTTTT---ATTATACCTTTTCTGCTTCATGTTTCGCTATGTTGA 1581
|| | ||| | || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1557 AATATTGTTCCTTATCTTTTTTTTATTATACCTTTTCTGCTTCAAGTTTCGCTATGTTGA 1616
Query 1582 GATaaaaaaaaaTCAAATAATTAATAAATAGTA-TTTTTT 1620
|| ||||||| ||||||||||||||||||||| ||||||
Sbjct 1617 GA-AAAAAAAT-TCAAATAATTAATAAATAGTAATTTTTT 1654
> AT3G23770.1 | Symbols: | O-Glycosyl hydrolases family 17 protein
| chr3:8565494-8567496 FORWARD LENGTH=1793
Length=1793
Score = 852 bits (461), Expect = 0.0
Identities = 1162/1491 (78%), Gaps = 86/1491 (6%)
Strand=Plus/Plus
Query 44 AAACACAAAGAC-ATGTCT-CTTCTTGCTTTCTTCCTCTTCACCCTCCTCGTCTTTTCAA 101
||||| ||| || ||| || ||| ||||| | ||||||||||| ||||| | | ||||||
Sbjct 51 AAACA-AAAAACAATGACTCCTT-TTGCTCTGTTCCTCTTCACTCTCCTTGCCCTTTCAA 108
Query 102 GTTCATGTTGTTCCGCGGC-TCGGTTCCAAGGGCATAAGTACATGCAGAGGAAAACAATG 160
|||||||||| || || | | || ||| | || || ||| | | | |||| ||
Sbjct 109 GTTCATGTTGCTCTGC--CATTGG-TCC-A---CA-AA--ACA---ACA-G--AACAGTG 152
Query 161 CTAG-ATTTGGCTAGCAAG-ATTGGTATCAACTATGGAAGACAAGGAAACAACCTCCCAT 218
||| | || || ||| || ||||| ||||||||||||| | ||| ||||| || || |
Sbjct 153 TTAGCACTT-GCAAGC-AGAATTGGGATCAACTATGGAAAATTAGGCAACAATCTTCCTT 210
Query 219 CTCCTTACCAATCCATCAACTTCATCAAATCCATCAAAGCTGGTCATGTCAAGCTCTATG 278
|||||||||||| |||||| |||||||| |||| ||||| || || |||||||||||||
Sbjct 211 TTCCTTACCAATCAATCAACCTCATCAAAACCATTAAAGCAGGCCACGTCAAGCTCTATG 270
Query 279 ACGCTGATCCAGAGAGTCTCACA-CTCCTCTCTCA-AACCAATCTCTACGTCACCATAAC 336
|||| |||||||| | || | | ||||||||| | |||||||| ||||||||||| |
Sbjct 271 ACGCCGATCCAGAAACCCT-AAAGCTCCTCTCT-ACGACCAATCTTTACGTCACCATCAT 328
Query 337 AGTCCCTAACCACCAGATCACCTCACTCAGCT-CTAACCAAACCACAGCTGACGAA-TGG 394
||||||||| ||||||||| |||| | || | || | ||| || | ||||| || |||
Sbjct 329 GGTCCCTAACAACCAGATCATCTCAAT-AGGTGCTGATCAAGCCGCTGCTGA-TAACTGG 386
Query 395 GTCAG-AACCAATATCC-TCCCTTACTATCCACAAACACAAATCCGCTTTGTCCTCGTTG 452
||| | || ||| ||| ||| || | | || ||||| | |||||| || ||||||||||
Sbjct 387 GTC-GCCACTAATGTCCTTCCTTTTC-ACCCGCAAACCCGAATCCGATTCGTCCTCGTTG 444
Query 453 GAAACGAAATACTAAGCTATA-AT-T-A-CGGGA-ATG----TCTCGGCGAACCTTGTAC 503
| ||||| | || ||||| | | | | | || | | | | ||| || ||||| |
Sbjct 445 GCAACGAGGTCCTCAGCTACAGTTCTGATCAAGACAAGCAAATATGGGCTAATCTTGTCC 504
Query 504 CTGCGATGCGCAAAATCGTGAATTCTCTCAGA-CTTCATGGGATTCACAATATCAAAGTC 562
|||| ||||| ||| | ||||| ||||| ||| | || ||| |||||||| ||||||||
Sbjct 505 CTGCCATGCGTAAAGTAGTGAACTCTCTTAGAGC-TCGTGGAATTCACAACATCAAAGTT 563
Query 563 GGGACACCTCTTGCCATGGATTCTCTCCGGTCTTCCTTTCCTCCTTCGAACGGAACATTC 622
|||||||||||||||||||| |||| || || ||||||||||||| || ||||||
Sbjct 564 GGGACACCTCTTGCCATGGACGCTCTTCGTTCGAGTTTTCCTCCTTCGAGTGGTACATTC 623
Query 623 CGGGAAGAAATCACCGGACCGGTGATGTTACCGTTGCTGAAGTTTCTTAACGGAACAAAC 682
|||||||| ||| | | |||||||||||||||||| |||||||||| || |||||||||
Sbjct 624 CGGGAAGATATCGCTGTTCCGGTGATGTTACCGTTGTTGAAGTTTCTCAATGGAACAAAC 683
Query 683 TCTTACTTCTTCCTCAATGTTCATCCTTACTTCCGTTGGTCAAAAAATCCCATGAA-CAC 741
|||| ||||||||| ||||| | |||||||||| |||||| | |||| | || ||
Sbjct 684 TCTTTCTTCTTCCTTGATGTTTACCCTTACTTCCCTTGGTCTACTGATCCGGTTAATAAC 743
Query 742 TAGTTTGGATTTTGCTCTGTTCCAA-GGTAACTCAACCTATACCGATCCTCAAACCGGTT 800
| |||||||||||||||||| || | || || || ||||||||||||||||||||||
Sbjct 744 CA-TTTGGATTTTGCTCTGTTTGAATCG-AATTCTACTTATACCGATCCTCAAACCGGTT 801
Query 801 TGGTTTAT-CGTAATCTTCTAGACCAAATGTTGGATTCGGTTCTCTTTGCTATGACCAAA 859
||||||| | |||||||||||||| ||| | ||||||||| ||||||| ||||||||
Sbjct 802 TGGTTTACACC-AATCTTCTAGACCAGATGCTCGATTCGGTTATCTTTGCGATGACCAAG 860
Query 860 CTCGGTTACCC-ACATATGC-GCCTCGCGATCTCCGAAACCGGATGGCCTAATTTCGGTG 917
|||||||| || | |||| | | ||||| ||||| |||||||| ||||||||| |||||
Sbjct 861 CTCGGTTATCCGA-ATAT-CAGTCTCGCAATCTCTGAAACCGGGTGGCCTAATGACGGTG 918
Query 918 ACATCGACGAAACCGGTGCCAACATTCTCAACGCGGCTACCTATAACCGGAATCTGATCA 977
| ||| | |||||||| || || ||| |||| || || || |||||||||||| ||||||
Sbjct 919 ATATCCATGAAACCGGAGCTAATATTGTCAATGCCGCGACGTATAACCGGAATTTGATCA 978
Query 978 AGAAGATGACCGC-AAGTCCACCAATCGGTACTCCATCTAGACCCGGTTTACCTATACCT 1036
|||||||||| || || || ||| ||||||| ||| |||| | |||| |||||||||
Sbjct 979 AGAAGATGACTGCTAAC-CCGCCACTCGGTACACCAGCTAGGCGCGGTGCACCTATACCG 1037
Query 1037 ACATTTGTT-TTCTCCTTATTCAACGAAAACCAGAAATCCGGTCCGGGAACACAAAGACA 1095
|| ||| || ||||| || ||||| |||||||||||| ||||| |||||||| | |||||
Sbjct 1038 ACGTTT-TTGTTCTCTTTGTTCAATGAAAACCAGAAACCCGGTTCGGGAACAGAGAGACA 1096
Query 1096 TTGGGGAATCTTGCATCCC-GACGGTTCACCAATCTACGACATTGATTTCACCGGTCAAA 1154
||||||||| ||| | ||| |||||| |||| ||||||||||| ||||||| |||| | |
Sbjct 1097 TTGGGGAATTTTGAA-CCCTGACGGTACACCGATCTACGACATCGATTTCAGCGGT-AGA 1154
Query 1155 A-ACCCTTAACCGGTTTCAACCCGTTACCTAAACCGACG-AACAACGTTCCCTACAAAGG 1212
| | | || | ||||| | |||| |||||||||| | ||||| ||||| | |||||
Sbjct 1155 AGATCGTTTTCTGGTTTTGATTCGTTGCCTAAACCGA-GTAACAATGTTCCGTTTAAAGG 1213
Query 1213 TCAA-GTGTGGTGCGTACCAGTCGAAGGCGCCAACGAGACTGAGCTTGA--AGAAACTTT 1269
| || || ||||| || | || || || ||| | ||| | ||||| | || |||
Sbjct 1214 T-AATGTATGGTGTGTGGCGGTTGATGGGGCCGATGAGGCAGAGCTAGGGCAGGCGCTTA 1272
Query 1270 GAGGATGGCTTGTGCCCA-AAGCAACACCACTTGTGCGGCTTTAGCTCCTGGGAG-AGAA 1327
| || |||| | | |||||| | || ||||| || || ||||| || || ||||
Sbjct 1273 -ACTTTG-CTTGCGGA-AGAAGCAATGCAACATGTGCAGCGTTGGCTCCAGG-AGGAGAA 1328
Query 1328 TGTTACG-AGCCGGTCTCTATTTA-TTGGCATGCAAGCTACGCGCTTAGCTCGTACTGGG 1385
|| || | | ||||| | || | ||||||||||||||| ||| |||||||||||||||
Sbjct 1329 TGCTATGCA-CCGGTGACGGTT-ACTTGGCATGCAAGCTATGCGTTTAGCTCGTACTGGG 1386
Query 1386 CTCAGTTTCGTAACCAAAGCAT-TCAATGTTACTTCAATGGATTGGCTCATGAGACAACG 1444
||||||| || ||||||||| | |||||| ||||||||||| ||||||| |||||| |||
Sbjct 1387 CTCAGTTCCGGAACCAAAGC-TCTCAATGCTACTTCAATGGTTTGGCTCGTGAGACCACG 1445
Query 1445 ACCAACCCTGGAAATGATCGTTGCAAGTTTCCGAGCGTTAC-TCTGTGAGG 1494
||||||||||||||||| |||||||||||||| |||||||| | |||||||
Sbjct 1446 ACCAACCCTGGAAATGAGCGTTGCAAGTTTCCTAGCGTTACAT-TGTGAGG 1495
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80019668730
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5