BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493518 Length=514 Score E Sequences producing significant alignments: (Bits) Value AT4G13950.1 | Symbols: RALFL31 | ralf-like 31 | chr4:8058072-80... 660 0.0 > AT4G13950.1 | Symbols: RALFL31 | ralf-like 31 | chr4:8058072-8058675 REVERSE LENGTH=604 Length=604 Score = 660 bits (357), Expect = 0.0 Identities = 430/464 (93%), Gaps = 10/464 (2%) Strand=Plus/Plus Query 1 TTCTACTTAGAGAC--AGACA-A-AGAGAGATCGCGTCGGCACAATCTGCAATTTTCCAA 56 |||| ||||||||| ||| | | |||||||||||||||||||||||||||| ||||||| Sbjct 1 TTCTGCTTAGAGACAGAGAAATAGAGAGAGATCGCGTCGGCACAATCTGCAA-TTTCCAA 59 Query 57 CATCGACATGTTTAACTCTATAGCGTTGGTAATTTTCGCCATTCTTTTCCTCTCAATCT- 115 |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| Sbjct 60 CATCGACATGTTTAACTCTACAGCGTTGGTGATTTTCGCCATTCTTTTCCTCTTAATCTC 119 Query 116 --CCAACGCGTTCCCGATTCCGTCGCCGAACGGAGAGATCGACGCAATGTTAG-TCCGAA 172 || | ||||||||||||||||| || ||||||||||||||||||||||| | |||||| Sbjct 120 CGCCGATGCGTTCCCGATTCCGTCTCCCAACGGAGAGATCGACGCAATGTT-GATCCGAA 178 Query 173 ACAGCCTCATCGGAGAAGATGAAGATCTAATGCCAACCGAGATCAGCCGGAGAGTACTGA 232 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 179 ACAGTATCATCGGAGAAGATGAAGATCTAATGCCAACTGAGATCAGCCGGAGAGTACTGA 238 Query 233 TGGCGCAGAAGCGGTACATCGGCTACGAAACCCTAAGGAGAGACATGGTTCCTTGTCAGA 292 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 239 TGGCGCAGAAACGGTACATCGGCTACGAAACGCTAAGGAGAGACATGGTTCCTTGTCAGA 298 Query 293 AACCAGGAGCTTCTTACTACGATTGTCGCTCTGGACAAGCTAATTCTTACAACAGAGGCT 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 299 AACCAGGAGCTTCTTACTACGATTGTCGCTCTGGACAAGCTAATTCTTACAGCAGAGGCT 358 Query 353 GCGAGACCATTACAAGATGTGCTAGAGACACAAGCGATATCAACACATGAAGGTAAGATC 412 | || |||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||| Sbjct 359 GTGACACCATTACCAGATGCGCTAGAGACACAAACGACATCAACACATGAAGGTAAGATC 418 Query 413 CAAGAAATTGCCAAAATTGGAAGTTTTTTAGCAGAGGCAAGTAA 456 ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct 419 CAAGAAATTGCCAAAATTGGAAGCTTTTTGGCCGAGGCAAGTAA 462 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24564497883 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5