BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493556
Length=1707
Score E
Sequences producing significant alignments: (Bits) Value
AT4G13510.1 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium tran... 2429 0.0
AT4G13505.1 | Symbols: | other RNA | chr4:7858000-7859691 REVE... 1971 0.0
AT3G24300.1 | Symbols: AMT1;3, ATAMT1;3 | ammonium transporter ... 782 0.0
> AT4G13510.1 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium transporter
1;1 | chr4:7858183-7859918 FORWARD LENGTH=1736
Length=1736
Score = 2429 bits (1315), Expect = 0.0
Identities = 1582/1712 (92%), Gaps = 13/1712 (1%)
Strand=Plus/Plus
Query 1 AGCCTCTCTGTTTCTTCTTCTTCTCTAATCTCTCAACATGTCTTGCAAC-GCGACCGATC 59
|||||||||||||| ||||||||||||| ||||||||||||||||| | || |||||||
Sbjct 1 AGCCTCTCTGTTTCATCTTCTTCTCTAAACTCTCAACATGTCTTGC-TCGGCCACCGATC 59
Query 60 TCTCGGTCTTGTTAGGTCCTAATGCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAA 119
|| | ||| |||| |||||||||||||||| ||| ||||||||||||||||||||| ||
Sbjct 60 TCGCTGTCCTGTTGGGTCCTAATGCCACGGCGGCGGCCAACTACATCTGTGGCCAGTTAG 119
Query 120 GCGTCGTCGACAGCAAGTTCATCGACGCCGCTTTCGCCATAGACACCACTTACCTCCTCT 179
||| |||| ||| ||| || |||||| |||||||||| ||||||| ||||||||| ||||
Sbjct 120 GCGACGTCAACAACAAATTTATCGACACCGCTTTCGCTATAGACAACACTTACCTTCTCT 179
Query 180 TCTCCGCTTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCG 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TCTCCGCCTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCG 239
Query 240 TAAGAGCTAAGAATACGATGAACATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAG 299
| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct 240 TGAGAGCCAAGAATACTATGAACATCATGCTTACCAACGTCCTTGACGCTGCAGCCGGTG 299
Query 300 GTCTCTTTTACTATCTATTTGGCTATGCTTTTGCCTTTGGATCTCCGTCCAATGGTTTCA 359
||||||| || ||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct 300 GTCTCTTCTATTATCTGTTTGGCTACGCCTTTGCCTTTGGATCTCCGTCCAATGGTTTCA 359
Query 360 TTGGTAAACACTACTTTGGTCTCAAAGATATCCCCACGGCCACTGCTGATTATTCCAATT 419
| |||||||||||||||||||||||||| |||||||||||| ||||||| || ||||| |
Sbjct 360 TCGGTAAACACTACTTTGGTCTCAAAGACATCCCCACGGCCTCTGCTGACTACTCCAACT 419
Query 420 TTCTCTACCAATGGGCCTTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTG 479
|||||||||||||||||||||| || || |||||||||||||| ||||| ||||||||||
Sbjct 420 TTCTCTACCAATGGGCCTTTGCAATCGCTGCGGCTGGAATCACAAGTGGCTCGATCGCTG 479
Query 480 AACGGACTCAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACC 539
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AACGGACACAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACC 539
Query 540 CGGTCGTGTCTCACTGGTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATG 599
||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||
Sbjct 540 CGGTCGTCTCTCACTGGTTCTGGTCAGTTGATGGATGGGCCAGCCCGTTCCGTACCGATG 599
Query 600 GAGATTTGCTTTTCAGAACCGGAGCGATCGATTTCGCTGGCTCCGGTGTTGTTCATATGG 659
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 600 GAGATTTGCTTTTCAGCACCGGAGCGATAGATTTCGCTGGGTCCGGTGTTGTTCATATGG 659
Query 660 TCGGAGGTATCGCTGGACTCTGGGGAGCGTTCATTGAAGGACCACGACTCGGCCGGTTCG 719
||||||||||||||||||||||||| ||| |||| ||||| |||||||| ||||||||||
Sbjct 660 TCGGAGGTATCGCTGGACTCTGGGGTGCGCTCATCGAAGGTCCACGACTTGGCCGGTTCG 719
Query 720 ATAACGGTGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTTGGAA 779
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ATAACGGAGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTTGGAA 779
Query 780 CATTCCTCCTTTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAAATCCTAG 839
|||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 780 CATTCCTCCTCTGGTTTGGATGGTACGGATTTAACCCCGGTTCCTTCAACAAGATCCTAG 839
Query 840 TCACATACCAAACAGGAACGTATCAA-GGCCAGTGGAGCGCGGTCGGACGGACGGCCGTC 898
|||| ||| | ||||| || || ||| |||||||||||||||||||||||||| || |||
Sbjct 840 TCACGTACGAGACAGGCACATA-CAACGGCCAGTGGAGCGCGGTCGGACGGACAGCTGTC 898
Query 899 ACTACCACCTTAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCTTCTC 958
|| || || ||||| ||||||||||||||||| || || || || || |||||||| |||
Sbjct 899 ACAACAACGTTAGCTGGCTGCACCGCGGCGCTGACAACCCTATTTGGGAAACGTCTACTC 958
Query 959 TCTGGCCATTGGAACGTCACCGATGTATGTAACGGTCTCCTCGGAGGGTTTGCAGCCATT 1018
|| || |||||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 959 TCGGGACATTGGAACGTCACTGATGTATGCAACGGCCTCCTCGGAGGGTTTGCAGCCATA 1018
Query 1019 ACCGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGCGGCC 1078
|| || |||||||| ||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 1019 ACTGGTGGCTGCTCTGTCGTTGAGCCATGGGCTGCGATCATCTGCGGGTTCGTGGCGGCC 1078
Query 1079 CTAGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAAGCTTAAATACGACGACCCACTTGAG 1138
|||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct 1079 CTAGTCCTCCTCGGATGCAACAAGCTCGCTGAGAAGCTCAAATACGACGACCCTCTTGAG 1138
Query 1139 GCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCTTTTCGCT 1198
||||||||||||||||| |||||||| |||||||||||||||||||| || || ||||||
Sbjct 1139 GCAGCACAACTACACGGTGGTTGCGGTGCGTGGGGACTAATATTCACGGCTCTCTTCGCT 1198
Query 1199 CAAGAAAAGTACTTGAACCAGATTTACGGCAACAGACCCGGAAGGCCACACGGTTTGTTT 1258
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1199 CAAGAAAAGTACTTGAACCAGATTTACGGCAACAAACCCGGAAGGCCACACGGTTTGTTT 1258
Query 1259 ATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCACGGGT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCACGGGT 1318
Query 1319 TGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTTGCGA 1378
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTTGCGG 1378
Query 1379 ATATCGGCAGAGGATGAGATGGCCGGTATGGATATGACCCGGCACGGTGGTTTTGCTTAT 1438
|||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1379 ATATCGTCCGAGGATGAGATGGCCGGTATGGATATGACCAGGCACGGTGGTTTTGCTTAT 1438
Query 1439 ATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCCACGG 1498
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 ATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCCACGA 1498
Query 1499 TCTCCTTCTCCTTCTGGTGCTAATACTACTCCAACTCCGGTTTGATTTGGATTTTTACTT 1558
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1499 TCTCCTTCTCCTTCTGGTGCTAATACTACACCTACTCCGGTTTGATTTGGATTTTTACTT 1558
Query 1559 TTATGT-T-TATTTTCTAGAGTATTATTATTAAACGATGGTTTGGGATATTTGAATATTG 1616
|||| | | ||||||||||||||||||| ||||| |||| |||| |||| || |||||||
Sbjct 1559 TTAT-TCTCTATTTTCTAGAGTATTATT-TTAAATGATGTTTTGTGATACTTAAATATTG 1616
Query 1617 TTTTGGATATTTTTTA-CATTTCAGTAATGTTTTTTAGATGTACAGTTTCGTGGGGGTTG 1675
||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||
Sbjct 1617 TTTTGGATATTTTTTTGCATTTCAGTAATGTTTT--AGATGTACAGTTTCATGGGG-TTG 1673
Query 1676 TGATGATTAATATCTATGTGGTCATTTGTGTT 1707
||||||| ||||||||||||||||||||||||
Sbjct 1674 TGATGAT-AATATCTATGTGGTCATTTGTGTT 1704
> AT4G13505.1 | Symbols: | other RNA | chr4:7858000-7859691 REVERSE
LENGTH=1625
Length=1625
Score = 1971 bits (1067), Expect = 0.0
Identities = 1246/1335 (93%), Gaps = 2/1335 (0%)
Strand=Plus/Minus
Query 176 CTCTTCTCCGCTTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGT 235
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 CTCTTCTCCGCCTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGT 1275
Query 236 TCCGTAAGAGCTAAGAATACGATGAACATCATGCTTACCAACGTTCTTGATGCTGCGGCC 295
||||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| |||
Sbjct 1274 TCCGTGAGAGCCAAGAATACTATGAACATCATGCTTACCAACGTCCTTGACGCTGCAGCC 1215
Query 296 GGAGGTCTCTTTTACTATCTATTTGGCTATGCTTTTGCCTTTGGATCTCCGTCCAATGGT 355
|| |||||||| || ||||| |||||||| || |||||||||||||||||||||||||||
Sbjct 1214 GGTGGTCTCTTCTATTATCTGTTTGGCTACGCCTTTGCCTTTGGATCTCCGTCCAATGGT 1155
Query 356 TTCATTGGTAAACACTACTTTGGTCTCAAAGATATCCCCACGGCCACTGCTGATTATTCC 415
||||| |||||||||||||||||||||||||| |||||||||||| ||||||| || |||
Sbjct 1154 TTCATCGGTAAACACTACTTTGGTCTCAAAGACATCCCCACGGCCTCTGCTGACTACTCC 1095
Query 416 AATTTTCTCTACCAATGGGCCTTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATC 475
|| ||||||||||||||||||||||| || || |||||||||||||| ||||| ||||||
Sbjct 1094 AACTTTCTCTACCAATGGGCCTTTGCAATCGCTGCGGCTGGAATCACAAGTGGCTCGATC 1035
Query 476 GCTGAACGGACTCAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTT 535
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 GCTGAACGGACACAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTT 975
Query 536 TACCCGGTCGTGTCTCACTGGTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACC 595
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct 974 TACCCGGTCGTCTCTCACTGGTTCTGGTCAGTTGATGGATGGGCCAGCCCGTTCCGTACC 915
Query 596 GATGGAGATTTGCTTTTCAGAACCGGAGCGATCGATTTCGCTGGCTCCGGTGTTGTTCAT 655
|||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct 914 GATGGAGATTTGCTTTTCAGCACCGGAGCGATAGATTTCGCTGGGTCCGGTGTTGTTCAT 855
Query 656 ATGGTCGGAGGTATCGCTGGACTCTGGGGAGCGTTCATTGAAGGACCACGACTCGGCCGG 715
||||||||||||||||||||||||||||| ||| |||| ||||| |||||||| ||||||
Sbjct 854 ATGGTCGGAGGTATCGCTGGACTCTGGGGTGCGCTCATCGAAGGTCCACGACTTGGCCGG 795
Query 716 TTCGATAACGGTGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT 775
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 794 TTCGATAACGGAGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT 735
Query 776 GGAACATTCCTCCTTTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAAATC 835
|||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 734 GGAACATTCCTCCTCTGGTTTGGATGGTACGGATTTAACCCCGGTTCCTTCAACAAGATC 675
Query 836 CTAGTCACATACCAAACAGGAACGTATCAA-GGCCAGTGGAGCGCGGTCGGACGGACGGC 894
|||||||| ||| | ||||| || || ||| |||||||||||||||||||||||||| ||
Sbjct 674 CTAGTCACGTACGAGACAGGCACATA-CAACGGCCAGTGGAGCGCGGTCGGACGGACAGC 616
Query 895 CGTCACTACCACCTTAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCT 954
||||| || || ||||| ||||||||||||||||| || || || || || ||||||||
Sbjct 615 TGTCACAACAACGTTAGCTGGCTGCACCGCGGCGCTGACAACCCTATTTGGGAAACGTCT 556
Query 955 TCTCTCTGGCCATTGGAACGTCACCGATGTATGTAACGGTCTCCTCGGAGGGTTTGCAGC 1014
||||| || |||||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct 555 ACTCTCGGGACATTGGAACGTCACTGATGTATGCAACGGCCTCCTCGGAGGGTTTGCAGC 496
Query 1015 CATTACCGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGC 1074
||| || || |||||||| ||||| ||||||||||| || ||||||||||||||||||||
Sbjct 495 CATAACTGGTGGCTGCTCTGTCGTTGAGCCATGGGCTGCGATCATCTGCGGGTTCGTGGC 436
Query 1075 GGCCCTAGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAAGCTTAAATACGACGACCCACT 1134
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct 435 GGCCCTAGTCCTCCTCGGATGCAACAAGCTCGCTGAGAAGCTCAAATACGACGACCCTCT 376
Query 1135 TGAGGCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCTTTT 1194
||||||||||||||||||||| |||||||| |||||||||||||||||||| || || ||
Sbjct 375 TGAGGCAGCACAACTACACGGTGGTTGCGGTGCGTGGGGACTAATATTCACGGCTCTCTT 316
Query 1195 CGCTCAAGAAAAGTACTTGAACCAGATTTACGGCAACAGACCCGGAAGGCCACACGGTTT 1254
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 315 CGCTCAAGAAAAGTACTTGAACCAGATTTACGGCAACAAACCCGGAAGGCCACACGGTTT 256
Query 1255 GTTTATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCAC 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 GTTTATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCAC 196
Query 1315 GGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTT 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 GGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTT 136
Query 1375 GCGAATATCGGCAGAGGATGAGATGGCCGGTATGGATATGACCCGGCACGGTGGTTTTGC 1434
||| |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 135 GCGGATATCGTCCGAGGATGAGATGGCCGGTATGGATATGACCAGGCACGGTGGTTTTGC 76
Query 1435 TTATATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCC 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTATATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCC 16
Query 1495 ACGGTCTCCTTCTCC 1509
||| |||||||||||
Sbjct 15 ACGATCTCCTTCTCC 1
> AT3G24300.1 | Symbols: AMT1;3, ATAMT1;3 | ammonium transporter
1;3 | chr3:8805631-8807388 REVERSE LENGTH=1758
Length=1758
Score = 782 bits (423), Expect = 0.0
Identities = 1101/1421 (77%), Gaps = 75/1421 (5%)
Strand=Plus/Plus
Query 83 GCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAAGCGTCGTCGACAGCAAGTTCATC 142
||||||| ||| ||| ||||||| || ||||| || || ||| ||| |||||||| |
Sbjct 92 GCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCACCGTTAACAACAAGTTCACC 151
Query 143 GACGCCGCTTTCGCCATAGACACCACTTACCTCCTCTTCTCCGCTTACCTTGTCTTCTCT 202
|| || || ||||||||||||| ||| |||||||||||||| || |||||||||||| |
Sbjct 152 GATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTCTGCCTACCTTGTCTTCGCC 211
Query 203 ATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCGTAAGAGCTAAGAATACGATGAAC 262
|||||||| |||||||||||||| ||||| ||||| || ||||| |||||||||||||||
Sbjct 212 ATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAGAGCCAAGAATACGATGAAC 271
Query 263 ATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAGGTCTCTTTTACTATCTATTTGGC 322
|||||||||||||| || ||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct 272 ATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACTCTTCTACTATCTCTTTGGT 331
Query 323 TATGCTTTTGCCTTTGGATC-TCCGTCC-AATGGTTTCATTGGTAA-ACACTACTTTGGT 379
|| || |||||||||||| ||| ||| || |||| |||||| || |||| |||||| |
Sbjct 332 TACGCCTTTGCCTTTGGAGGATCC-TCCGAAGGGTT-CATTGG-AAGACACAACTTTGCT 388
Query 380 CTCAAAGA-TATCCCCACGGCCACTGCTGATTATTCCAATT-TTC-TCTACCAATGGGCC 436
|| | ||| | ||| || |||| |||||||| || || ||| |||||||||||||
Sbjct 389 CTTAGAGACTTTCCG-ACTCCCACAGCTGATTACTCT--TTCTTCCTCTACCAATGGGCG 445
Query 437 TTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTGA-ACGGACTCAGTTCGT 495
|| || || || || ||||||||||| |||||||||||||| || | |||||||||||||
Sbjct 446 TTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGA-GGACTCAGTTCGT 504
Query 496 GGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACCCGGTCGTGTCTCACTG 555
||||||| | || || || |||||||||||||| |||||||||||||| || ||||||||
Sbjct 505 GGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGTTGTCTCTCACTG 564
Query 556 GTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATGGA-GATTTGCTT-TTC 613
||| ||||| ||||||||||||||||| || || | | ||| ||| | || ||
Sbjct 565 GTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGC-GGATGATC-GTTTGTTT 622
Query 614 AGAACCGGAGCGATCGA-TTTCGCTGGCTCCGGTGTTGTTCATATGGTCGGAGGTATCGC 672
|| |||||||| || || ||| |||||||||||||||||||| ||||| || || || ||
Sbjct 623 AGCACCGGAGCCATTGACTTT-GCTGGCTCCGGTGTTGTTCACATGGTTGGTGGCATAGC 681
Query 673 TGGACTCTGGGGAGCG-TTCATTGAAGGACCACGAC-TCGGCCGGTTCGATAACGGTGGC 730
|| | ||||| || || |||||||| || || | | || |||||||| || |||||
Sbjct 682 AGGTTTATGGGGTGCTCTT-ATTGAAGGTCCTCGTCGT-GGTCGGTTCGAGAAAGGTGGT 739
Query 731 CGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT-GGAACATTCCTCCT 789
|| || || ||||| || |||||||| || || || || ||| || ||||| ||||||||
Sbjct 740 CGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTC-TTAGGAACCTTCCTCCT 798
Query 790 TTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAA-ATCCTAGT-CACATAC 847
|||||||||||||| || |||||||||||||| |||| | || || || || | | ||
Sbjct 799 ATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCA-CTAAGATACTCGTTC-CGTAT 856
Query 848 CAAA-CAGGAACGTATCAA-GGCCAGTGGAGCGCGG-TCGGACGGACGGCCGTCA-CTAC 903
|| | || | | | | ||||| ||||||| | |||| || || || || | | ||
Sbjct 857 -AATTCTGGTTCCAA-CTACGGCCAATGGAGCG-GAATCGGCCGTACAGCGGTTAAC-AC 912
Query 904 CAC-CT-TAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCTTCTCTCT 961
||| || | | || ||||| || || || || || ||||| || |||||||| || ||
Sbjct 913 CACACTCT--CAGGATGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCTCCTATCA 970
Query 962 GGCCATTGGAACGTCACCGATGTATGTAACGG-TCTCCTCGGAGGGTTTGCAGCCATTAC 1020
||||| |||||||| || || || || ||||| | | ||||| |||||||| ||||| ||
Sbjct 971 GGCCACTGGAACGTAACGGACGTTTGCAACGGGT-TACTCGGTGGGTTTGCGGCCATAAC 1029
Query 1021 CGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGCGGCCCT 1080
|| || ||||| ||||||||||||||||| || || | ||||| ||| |||| | |
Sbjct 1030 CGCAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGGCTTCTGT 1089
Query 1081 AGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAA-GCTTA-AATACGACGACCCACTTGAG 1138
||||| |||| |||||||||||||||||| | | | |||| || || ||||| |||
Sbjct 1090 CGTCCTTATCGGATGCAACAAGCTCGCGGAGCTTG-T-ACAATATGATGATCCACTCGAG 1147
Query 1139 GCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCT-TTTCGC 1197
||||| |||||||| || || || ||||||||||| | |||||| || | ||| ||
Sbjct 1148 GCAGCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAGGATTGTTT-GC 1206
Query 1198 TCAA-GAAAAGTA-CTTGAACCAGATTTACGGCAACAGACCCGG-AAGGCCACACGGTTT 1254
||| || ||||| || ||| || |||| ||| || ||||| ||||||| | || |
Sbjct 1207 -CAAAGAGAAGTATCTA-AACGAGGTTTATGGCGCCAC-CCCGGGAAGGCCATATGGACT 1263
Query 1255 GTTTATGGGCGGTGGAGGAAAACTACTTGG-AGCTCAGCTGATTCAGAT-CATTGTGATC 1312
||||||||||| ||||| || || |||| ||| || || |||| || | |||||||
Sbjct 1264 ATTTATGGGCGGAGGAGGGAAGCTG-TTGGGAGCACAATTGGTTCAAATAC-TTGTGATT 1321
Query 1313 ACGGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAA-TGAAAT- 1370
|| ||||| ||||| || ||||| ||||| |||||||||||||| || | || |
Sbjct 1322 GTAGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAA-AAGGCTCAA-TC 1379
Query 1371 TG-TT-GCGAATATCGGCAG-AGGATGAGATGGCC-GGTATGGATATGACCCGGCACGGT 1426
|| || | || | |||| || || |||| ||| | || ||||||||||| || ||||||
Sbjct 1380 TGCTTAG-GA-TCTCGG-AGCAGCATGAAATG-CAAGGGATGGATATGACACGTCACGGT 1435
Query 1427 GGTTTTGCTTATATGTACTTTGAT---GATGATGAGTCTCA 1464
|| ||||||||||| ||| |||| ||||||||||||||
Sbjct 1436 GGCTTTGCTTATATCTACCATGATAATGATGATGAGTCTCA 1476
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84387116145
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5