BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493556 Length=1707 Score E Sequences producing significant alignments: (Bits) Value AT4G13510.1 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium tran... 2429 0.0 AT4G13505.1 | Symbols: | other RNA | chr4:7858000-7859691 REVE... 1971 0.0 AT3G24300.1 | Symbols: AMT1;3, ATAMT1;3 | ammonium transporter ... 782 0.0 > AT4G13510.1 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium transporter 1;1 | chr4:7858183-7859918 FORWARD LENGTH=1736 Length=1736 Score = 2429 bits (1315), Expect = 0.0 Identities = 1582/1712 (92%), Gaps = 13/1712 (1%) Strand=Plus/Plus Query 1 AGCCTCTCTGTTTCTTCTTCTTCTCTAATCTCTCAACATGTCTTGCAAC-GCGACCGATC 59 |||||||||||||| ||||||||||||| ||||||||||||||||| | || ||||||| Sbjct 1 AGCCTCTCTGTTTCATCTTCTTCTCTAAACTCTCAACATGTCTTGC-TCGGCCACCGATC 59 Query 60 TCTCGGTCTTGTTAGGTCCTAATGCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAA 119 || | ||| |||| |||||||||||||||| ||| ||||||||||||||||||||| || Sbjct 60 TCGCTGTCCTGTTGGGTCCTAATGCCACGGCGGCGGCCAACTACATCTGTGGCCAGTTAG 119 Query 120 GCGTCGTCGACAGCAAGTTCATCGACGCCGCTTTCGCCATAGACACCACTTACCTCCTCT 179 ||| |||| ||| ||| || |||||| |||||||||| ||||||| ||||||||| |||| Sbjct 120 GCGACGTCAACAACAAATTTATCGACACCGCTTTCGCTATAGACAACACTTACCTTCTCT 179 Query 180 TCTCCGCTTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCG 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 TCTCCGCCTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCG 239 Query 240 TAAGAGCTAAGAATACGATGAACATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAG 299 | ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||| | Sbjct 240 TGAGAGCCAAGAATACTATGAACATCATGCTTACCAACGTCCTTGACGCTGCAGCCGGTG 299 Query 300 GTCTCTTTTACTATCTATTTGGCTATGCTTTTGCCTTTGGATCTCCGTCCAATGGTTTCA 359 ||||||| || ||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct 300 GTCTCTTCTATTATCTGTTTGGCTACGCCTTTGCCTTTGGATCTCCGTCCAATGGTTTCA 359 Query 360 TTGGTAAACACTACTTTGGTCTCAAAGATATCCCCACGGCCACTGCTGATTATTCCAATT 419 | |||||||||||||||||||||||||| |||||||||||| ||||||| || ||||| | Sbjct 360 TCGGTAAACACTACTTTGGTCTCAAAGACATCCCCACGGCCTCTGCTGACTACTCCAACT 419 Query 420 TTCTCTACCAATGGGCCTTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTG 479 |||||||||||||||||||||| || || |||||||||||||| ||||| |||||||||| Sbjct 420 TTCTCTACCAATGGGCCTTTGCAATCGCTGCGGCTGGAATCACAAGTGGCTCGATCGCTG 479 Query 480 AACGGACTCAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACC 539 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 AACGGACACAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACC 539 Query 540 CGGTCGTGTCTCACTGGTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATG 599 ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 540 CGGTCGTCTCTCACTGGTTCTGGTCAGTTGATGGATGGGCCAGCCCGTTCCGTACCGATG 599 Query 600 GAGATTTGCTTTTCAGAACCGGAGCGATCGATTTCGCTGGCTCCGGTGTTGTTCATATGG 659 |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 600 GAGATTTGCTTTTCAGCACCGGAGCGATAGATTTCGCTGGGTCCGGTGTTGTTCATATGG 659 Query 660 TCGGAGGTATCGCTGGACTCTGGGGAGCGTTCATTGAAGGACCACGACTCGGCCGGTTCG 719 ||||||||||||||||||||||||| ||| |||| ||||| |||||||| |||||||||| Sbjct 660 TCGGAGGTATCGCTGGACTCTGGGGTGCGCTCATCGAAGGTCCACGACTTGGCCGGTTCG 719 Query 720 ATAACGGTGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTTGGAA 779 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 ATAACGGAGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTTGGAA 779 Query 780 CATTCCTCCTTTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAAATCCTAG 839 |||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct 780 CATTCCTCCTCTGGTTTGGATGGTACGGATTTAACCCCGGTTCCTTCAACAAGATCCTAG 839 Query 840 TCACATACCAAACAGGAACGTATCAA-GGCCAGTGGAGCGCGGTCGGACGGACGGCCGTC 898 |||| ||| | ||||| || || ||| |||||||||||||||||||||||||| || ||| Sbjct 840 TCACGTACGAGACAGGCACATA-CAACGGCCAGTGGAGCGCGGTCGGACGGACAGCTGTC 898 Query 899 ACTACCACCTTAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCTTCTC 958 || || || ||||| ||||||||||||||||| || || || || || |||||||| ||| Sbjct 899 ACAACAACGTTAGCTGGCTGCACCGCGGCGCTGACAACCCTATTTGGGAAACGTCTACTC 958 Query 959 TCTGGCCATTGGAACGTCACCGATGTATGTAACGGTCTCCTCGGAGGGTTTGCAGCCATT 1018 || || |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 959 TCGGGACATTGGAACGTCACTGATGTATGCAACGGCCTCCTCGGAGGGTTTGCAGCCATA 1018 Query 1019 ACCGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGCGGCC 1078 || || |||||||| ||||| ||||||||||| || |||||||||||||||||||||||| Sbjct 1019 ACTGGTGGCTGCTCTGTCGTTGAGCCATGGGCTGCGATCATCTGCGGGTTCGTGGCGGCC 1078 Query 1079 CTAGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAAGCTTAAATACGACGACCCACTTGAG 1138 |||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct 1079 CTAGTCCTCCTCGGATGCAACAAGCTCGCTGAGAAGCTCAAATACGACGACCCTCTTGAG 1138 Query 1139 GCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCTTTTCGCT 1198 ||||||||||||||||| |||||||| |||||||||||||||||||| || || |||||| Sbjct 1139 GCAGCACAACTACACGGTGGTTGCGGTGCGTGGGGACTAATATTCACGGCTCTCTTCGCT 1198 Query 1199 CAAGAAAAGTACTTGAACCAGATTTACGGCAACAGACCCGGAAGGCCACACGGTTTGTTT 1258 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1199 CAAGAAAAGTACTTGAACCAGATTTACGGCAACAAACCCGGAAGGCCACACGGTTTGTTT 1258 Query 1259 ATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCACGGGT 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 ATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCACGGGT 1318 Query 1319 TGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTTGCGA 1378 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 TGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTTGCGG 1378 Query 1379 ATATCGGCAGAGGATGAGATGGCCGGTATGGATATGACCCGGCACGGTGGTTTTGCTTAT 1438 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1379 ATATCGTCCGAGGATGAGATGGCCGGTATGGATATGACCAGGCACGGTGGTTTTGCTTAT 1438 Query 1439 ATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCCACGG 1498 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 ATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCCACGA 1498 Query 1499 TCTCCTTCTCCTTCTGGTGCTAATACTACTCCAACTCCGGTTTGATTTGGATTTTTACTT 1558 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 1499 TCTCCTTCTCCTTCTGGTGCTAATACTACACCTACTCCGGTTTGATTTGGATTTTTACTT 1558 Query 1559 TTATGT-T-TATTTTCTAGAGTATTATTATTAAACGATGGTTTGGGATATTTGAATATTG 1616 |||| | | ||||||||||||||||||| ||||| |||| |||| |||| || ||||||| Sbjct 1559 TTAT-TCTCTATTTTCTAGAGTATTATT-TTAAATGATGTTTTGTGATACTTAAATATTG 1616 Query 1617 TTTTGGATATTTTTTA-CATTTCAGTAATGTTTTTTAGATGTACAGTTTCGTGGGGGTTG 1675 ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||| Sbjct 1617 TTTTGGATATTTTTTTGCATTTCAGTAATGTTTT--AGATGTACAGTTTCATGGGG-TTG 1673 Query 1676 TGATGATTAATATCTATGTGGTCATTTGTGTT 1707 ||||||| |||||||||||||||||||||||| Sbjct 1674 TGATGAT-AATATCTATGTGGTCATTTGTGTT 1704 > AT4G13505.1 | Symbols: | other RNA | chr4:7858000-7859691 REVERSE LENGTH=1625 Length=1625 Score = 1971 bits (1067), Expect = 0.0 Identities = 1246/1335 (93%), Gaps = 2/1335 (0%) Strand=Plus/Minus Query 176 CTCTTCTCCGCTTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGT 235 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1334 CTCTTCTCCGCCTACCTTGTCTTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGT 1275 Query 236 TCCGTAAGAGCTAAGAATACGATGAACATCATGCTTACCAACGTTCTTGATGCTGCGGCC 295 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||| Sbjct 1274 TCCGTGAGAGCCAAGAATACTATGAACATCATGCTTACCAACGTCCTTGACGCTGCAGCC 1215 Query 296 GGAGGTCTCTTTTACTATCTATTTGGCTATGCTTTTGCCTTTGGATCTCCGTCCAATGGT 355 || |||||||| || ||||| |||||||| || ||||||||||||||||||||||||||| Sbjct 1214 GGTGGTCTCTTCTATTATCTGTTTGGCTACGCCTTTGCCTTTGGATCTCCGTCCAATGGT 1155 Query 356 TTCATTGGTAAACACTACTTTGGTCTCAAAGATATCCCCACGGCCACTGCTGATTATTCC 415 ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| || ||| Sbjct 1154 TTCATCGGTAAACACTACTTTGGTCTCAAAGACATCCCCACGGCCTCTGCTGACTACTCC 1095 Query 416 AATTTTCTCTACCAATGGGCCTTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATC 475 || ||||||||||||||||||||||| || || |||||||||||||| ||||| |||||| Sbjct 1094 AACTTTCTCTACCAATGGGCCTTTGCAATCGCTGCGGCTGGAATCACAAGTGGCTCGATC 1035 Query 476 GCTGAACGGACTCAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTT 535 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1034 GCTGAACGGACACAGTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTT 975 Query 536 TACCCGGTCGTGTCTCACTGGTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACC 595 ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct 974 TACCCGGTCGTCTCTCACTGGTTCTGGTCAGTTGATGGATGGGCCAGCCCGTTCCGTACC 915 Query 596 GATGGAGATTTGCTTTTCAGAACCGGAGCGATCGATTTCGCTGGCTCCGGTGTTGTTCAT 655 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct 914 GATGGAGATTTGCTTTTCAGCACCGGAGCGATAGATTTCGCTGGGTCCGGTGTTGTTCAT 855 Query 656 ATGGTCGGAGGTATCGCTGGACTCTGGGGAGCGTTCATTGAAGGACCACGACTCGGCCGG 715 ||||||||||||||||||||||||||||| ||| |||| ||||| |||||||| |||||| Sbjct 854 ATGGTCGGAGGTATCGCTGGACTCTGGGGTGCGCTCATCGAAGGTCCACGACTTGGCCGG 795 Query 716 TTCGATAACGGTGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT 775 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 794 TTCGATAACGGAGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT 735 Query 776 GGAACATTCCTCCTTTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAAATC 835 |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct 734 GGAACATTCCTCCTCTGGTTTGGATGGTACGGATTTAACCCCGGTTCCTTCAACAAGATC 675 Query 836 CTAGTCACATACCAAACAGGAACGTATCAA-GGCCAGTGGAGCGCGGTCGGACGGACGGC 894 |||||||| ||| | ||||| || || ||| |||||||||||||||||||||||||| || Sbjct 674 CTAGTCACGTACGAGACAGGCACATA-CAACGGCCAGTGGAGCGCGGTCGGACGGACAGC 616 Query 895 CGTCACTACCACCTTAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCT 954 ||||| || || ||||| ||||||||||||||||| || || || || || |||||||| Sbjct 615 TGTCACAACAACGTTAGCTGGCTGCACCGCGGCGCTGACAACCCTATTTGGGAAACGTCT 556 Query 955 TCTCTCTGGCCATTGGAACGTCACCGATGTATGTAACGGTCTCCTCGGAGGGTTTGCAGC 1014 ||||| || |||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct 555 ACTCTCGGGACATTGGAACGTCACTGATGTATGCAACGGCCTCCTCGGAGGGTTTGCAGC 496 Query 1015 CATTACCGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGC 1074 ||| || || |||||||| ||||| ||||||||||| || |||||||||||||||||||| Sbjct 495 CATAACTGGTGGCTGCTCTGTCGTTGAGCCATGGGCTGCGATCATCTGCGGGTTCGTGGC 436 Query 1075 GGCCCTAGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAAGCTTAAATACGACGACCCACT 1134 |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| || Sbjct 435 GGCCCTAGTCCTCCTCGGATGCAACAAGCTCGCTGAGAAGCTCAAATACGACGACCCTCT 376 Query 1135 TGAGGCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCTTTT 1194 ||||||||||||||||||||| |||||||| |||||||||||||||||||| || || || Sbjct 375 TGAGGCAGCACAACTACACGGTGGTTGCGGTGCGTGGGGACTAATATTCACGGCTCTCTT 316 Query 1195 CGCTCAAGAAAAGTACTTGAACCAGATTTACGGCAACAGACCCGGAAGGCCACACGGTTT 1254 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 315 CGCTCAAGAAAAGTACTTGAACCAGATTTACGGCAACAAACCCGGAAGGCCACACGGTTT 256 Query 1255 GTTTATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCAC 1314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 GTTTATGGGCGGTGGAGGAAAACTACTTGGAGCTCAGCTGATTCAGATCATTGTGATCAC 196 Query 1315 GGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTT 1374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 195 GGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAATGAAATTGTT 136 Query 1375 GCGAATATCGGCAGAGGATGAGATGGCCGGTATGGATATGACCCGGCACGGTGGTTTTGC 1434 ||| |||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 135 GCGGATATCGTCCGAGGATGAGATGGCCGGTATGGATATGACCAGGCACGGTGGTTTTGC 76 Query 1435 TTATATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCC 1494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75 TTATATGTACTTTGATGATGATGAGTCTCACAAAGCCATTCAGCTTAGGAGAGTTGAGCC 16 Query 1495 ACGGTCTCCTTCTCC 1509 ||| ||||||||||| Sbjct 15 ACGATCTCCTTCTCC 1 > AT3G24300.1 | Symbols: AMT1;3, ATAMT1;3 | ammonium transporter 1;3 | chr3:8805631-8807388 REVERSE LENGTH=1758 Length=1758 Score = 782 bits (423), Expect = 0.0 Identities = 1101/1421 (77%), Gaps = 75/1421 (5%) Strand=Plus/Plus Query 83 GCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAAGCGTCGTCGACAGCAAGTTCATC 142 ||||||| ||| ||| ||||||| || ||||| || || ||| ||| |||||||| | Sbjct 92 GCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCACCGTTAACAACAAGTTCACC 151 Query 143 GACGCCGCTTTCGCCATAGACACCACTTACCTCCTCTTCTCCGCTTACCTTGTCTTCTCT 202 || || || ||||||||||||| ||| |||||||||||||| || |||||||||||| | Sbjct 152 GATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTCTGCCTACCTTGTCTTCGCC 211 Query 203 ATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCGTAAGAGCTAAGAATACGATGAAC 262 |||||||| |||||||||||||| ||||| ||||| || ||||| ||||||||||||||| Sbjct 212 ATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAGAGCCAAGAATACGATGAAC 271 Query 263 ATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAGGTCTCTTTTACTATCTATTTGGC 322 |||||||||||||| || ||||| ||||| |||||||| ||||| |||||||| ||||| Sbjct 272 ATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACTCTTCTACTATCTCTTTGGT 331 Query 323 TATGCTTTTGCCTTTGGATC-TCCGTCC-AATGGTTTCATTGGTAA-ACACTACTTTGGT 379 || || |||||||||||| ||| ||| || |||| |||||| || |||| |||||| | Sbjct 332 TACGCCTTTGCCTTTGGAGGATCC-TCCGAAGGGTT-CATTGG-AAGACACAACTTTGCT 388 Query 380 CTCAAAGA-TATCCCCACGGCCACTGCTGATTATTCCAATT-TTC-TCTACCAATGGGCC 436 || | ||| | ||| || |||| |||||||| || || ||| ||||||||||||| Sbjct 389 CTTAGAGACTTTCCG-ACTCCCACAGCTGATTACTCT--TTCTTCCTCTACCAATGGGCG 445 Query 437 TTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTGA-ACGGACTCAGTTCGT 495 || || || || || ||||||||||| |||||||||||||| || | ||||||||||||| Sbjct 446 TTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGA-GGACTCAGTTCGT 504 Query 496 GGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACCCGGTCGTGTCTCACTG 555 ||||||| | || || || |||||||||||||| |||||||||||||| || |||||||| Sbjct 505 GGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGTTGTCTCTCACTG 564 Query 556 GTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATGGA-GATTTGCTT-TTC 613 ||| ||||| ||||||||||||||||| || || | | ||| ||| | || || Sbjct 565 GTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGC-GGATGATC-GTTTGTTT 622 Query 614 AGAACCGGAGCGATCGA-TTTCGCTGGCTCCGGTGTTGTTCATATGGTCGGAGGTATCGC 672 || |||||||| || || ||| |||||||||||||||||||| ||||| || || || || Sbjct 623 AGCACCGGAGCCATTGACTTT-GCTGGCTCCGGTGTTGTTCACATGGTTGGTGGCATAGC 681 Query 673 TGGACTCTGGGGAGCG-TTCATTGAAGGACCACGAC-TCGGCCGGTTCGATAACGGTGGC 730 || | ||||| || || |||||||| || || | | || |||||||| || ||||| Sbjct 682 AGGTTTATGGGGTGCTCTT-ATTGAAGGTCCTCGTCGT-GGTCGGTTCGAGAAAGGTGGT 739 Query 731 CGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT-GGAACATTCCTCCT 789 || || || ||||| || |||||||| || || || || ||| || ||||| |||||||| Sbjct 740 CGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTC-TTAGGAACCTTCCTCCT 798 Query 790 TTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAA-ATCCTAGT-CACATAC 847 |||||||||||||| || |||||||||||||| |||| | || || || || | | || Sbjct 799 ATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCA-CTAAGATACTCGTTC-CGTAT 856 Query 848 CAAA-CAGGAACGTATCAA-GGCCAGTGGAGCGCGG-TCGGACGGACGGCCGTCA-CTAC 903 || | || | | | | ||||| ||||||| | |||| || || || || | | || Sbjct 857 -AATTCTGGTTCCAA-CTACGGCCAATGGAGCG-GAATCGGCCGTACAGCGGTTAAC-AC 912 Query 904 CAC-CT-TAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCTTCTCTCT 961 ||| || | | || ||||| || || || || || ||||| || |||||||| || || Sbjct 913 CACACTCT--CAGGATGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCTCCTATCA 970 Query 962 GGCCATTGGAACGTCACCGATGTATGTAACGG-TCTCCTCGGAGGGTTTGCAGCCATTAC 1020 ||||| |||||||| || || || || ||||| | | ||||| |||||||| ||||| || Sbjct 971 GGCCACTGGAACGTAACGGACGTTTGCAACGGGT-TACTCGGTGGGTTTGCGGCCATAAC 1029 Query 1021 CGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGCGGCCCT 1080 || || ||||| ||||||||||||||||| || || | ||||| ||| |||| | | Sbjct 1030 CGCAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGGCTTCTGT 1089 Query 1081 AGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAA-GCTTA-AATACGACGACCCACTTGAG 1138 ||||| |||| |||||||||||||||||| | | | |||| || || ||||| ||| Sbjct 1090 CGTCCTTATCGGATGCAACAAGCTCGCGGAGCTTG-T-ACAATATGATGATCCACTCGAG 1147 Query 1139 GCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCT-TTTCGC 1197 ||||| |||||||| || || || ||||||||||| | |||||| || | ||| || Sbjct 1148 GCAGCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAGGATTGTTT-GC 1206 Query 1198 TCAA-GAAAAGTA-CTTGAACCAGATTTACGGCAACAGACCCGG-AAGGCCACACGGTTT 1254 ||| || ||||| || ||| || |||| ||| || ||||| ||||||| | || | Sbjct 1207 -CAAAGAGAAGTATCTA-AACGAGGTTTATGGCGCCAC-CCCGGGAAGGCCATATGGACT 1263 Query 1255 GTTTATGGGCGGTGGAGGAAAACTACTTGG-AGCTCAGCTGATTCAGAT-CATTGTGATC 1312 ||||||||||| ||||| || || |||| ||| || || |||| || | ||||||| Sbjct 1264 ATTTATGGGCGGAGGAGGGAAGCTG-TTGGGAGCACAATTGGTTCAAATAC-TTGTGATT 1321 Query 1313 ACGGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAA-TGAAAT- 1370 || ||||| ||||| || ||||| ||||| |||||||||||||| || | || | Sbjct 1322 GTAGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAA-AAGGCTCAA-TC 1379 Query 1371 TG-TT-GCGAATATCGGCAG-AGGATGAGATGGCC-GGTATGGATATGACCCGGCACGGT 1426 || || | || | |||| || || |||| ||| | || ||||||||||| || |||||| Sbjct 1380 TGCTTAG-GA-TCTCGG-AGCAGCATGAAATG-CAAGGGATGGATATGACACGTCACGGT 1435 Query 1427 GGTTTTGCTTATATGTACTTTGAT---GATGATGAGTCTCA 1464 || ||||||||||| ||| |||| |||||||||||||| Sbjct 1436 GGCTTTGCTTATATCTACCATGATAATGATGATGAGTCTCA 1476 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84387116145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5