BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493618 Length=2359 Score E Sequences producing significant alignments: (Bits) Value AT5G35570.1 | Symbols: | O-fucosyltransferase family protein |... 1868 0.0 > AT5G35570.1 | Symbols: | O-fucosyltransferase family protein | chr5:13749711-13753458 REVERSE LENGTH=2424 Length=2424 Score = 1868 bits (1011), Expect = 0.0 Identities = 1215/1306 (93%), Gaps = 44/1306 (3%) Strand=Plus/Plus Query 1 AAAAAGATAGCAACAATC---GAAGAAGAGCTTGAAATGGGCCACCACCACGACGGTGGC 57 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 40 AAAAAGATAGCAACAATCGAAGAAGAAGAGCTTGAAATGGGCCACCACCACGACGGTGGC 99 Query 58 GATGGCGTCCCTCAACATCATGTCAACAGCCCTCGATTTTCCGGTCCTATGACCCGTCGT 117 |||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| |||||| Sbjct 100 GATGGCGTACCTCAACATCACGTCAACAGTCCTCGATTTTCCGGTCCAATGACTCGTCGT 159 Query 118 GCTCAATCTTTCAAACGCGGCGGTT-C-C-GG-AGGTAGTAGC------AGCAATACTCA 167 |||||||| |||||||||||||||| | | || | |||||||| | |||||||| Sbjct 160 GCTCAATCATTCAAACGCGGCGGTTCCGCTGGTA-GTAGTAGCAATAATAATAATACTCA 218 Query 168 ---C-------GT--CGGTGATGG---------CAACAACAC-T--TCGACCTTGAGAGT 203 | || ||||||||| ||||||||| | |||||||||||||| Sbjct 219 CGTCGGTGTTAGTGGCGGTGATGGCAACAACAACAACAACACTTCCTCGACCTTGAGAGT 278 Query 204 TCACCACGAGATCGATCTGCCGCTTAATTCACCTAGATCAGAGATTGTTTCTGGTTCTTC 263 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 279 TCATCACGAGATCGATCTACCGCTTAATTCACCTAGATCAGAGATTGTTTCTGGCTCTTC 338 Query 264 CGGTTCAGATCCGAGCGGTGGATTTGATTCTGCTCTCAATAGAAAGCATCAGACGTATGG 323 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 339 CGGTTCAGATCCGAGTGGTGGATTTGATTCTGCTCTCAATAGAAAACATCAGACTTATGG 398 Query 324 GCAGTTGAGAGAGAGAGTTGTGAAAGGTTTGTTGAGGAAGCCCATGGGATCGGTTGTTTC 383 |||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||| || Sbjct 399 TCAGTTGCGAGAGAGAGTTGTGAAAGGCTTGTTGAGGAAGCCGATGGGATCTGTTGTCTC 458 Query 384 GGATTTTAGTTTGAGAGAGAGGAAGAAACTTGGCCATTGGAtgttttttgccttttgtgg 443 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 459 GGATTTTAGTTTGAGAGAGAGGAAGAAACTTGGTCATTGGATGTTTTTTGCGTTTTGTGG 518 Query 444 tgtttgtttgtttttgggtgttttCAAGATTTGTGCTACTGGTTGGCTTGGATCTGCCAT 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 519 TGTTTGTTTGTTTTTGGGTGTTTTCAAGATTTGTGCTACTGGTTGGCTTGGATCTGCCAT 578 Query 504 TGATGGTGCTGCTTCCCATCAGGATTTATCCAACTCAATTCCCCGAGTAAATCTACTTGA 563 |||||||||||||||| ||||||||||||| | || |||||||||||||||||||| Sbjct 579 TGATGGTGCTGCTTCCGATCAGGATTTATCTA--TC----CCCCGAGTAAATCTACTTGA 632 Query 564 TCATAGCTCCCATGATTATATCTATAAAGATGGAGGGAATGATGTTGATCCAACTTTGGT 623 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 633 TCATAGCTCCCATGATTATATCTATAAAGATGGAGGGAATGATGTTGATCCTACTTTGGT 692 Query 624 TATGGTTGCTTCAGATGTTGTGGGTGACCAAAACAGTGTAGTTGAATATTCAGGTGTCTG 683 ||||||||||||||| || |||||||| ||||||||||||||||||| |||||||||||| Sbjct 693 TATGGTTGCTTCAGACGTGGTGGGTGATCAAAACAGTGTAGTTGAATTTTCAGGTGTCTG 752 Query 684 GGCAAAACCTGAGAGTGGAAATTTCTCACGGTGCATTGACAATCCAAGGAGTCGCAAAAA 743 ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| Sbjct 753 GGCAAAACCTGAGAGTGGAAATTTCTCGCGGTGCATTGACAGTTCAAGGAGTCGCAAAAA 812 Query 744 GTTAGGTGCTAATACGAATGGCTACCTTCTCATAAATGCTAATGGAGGACTAAACCAAAT 803 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 813 GTTGGGTGCTAATACGAATGGCTATCTTCTCATAAATGCTAATGGAGGACTAAACCAAAT 872 Query 804 GAGATTTGGGATATGTGATATGGTTGCAGTTGCTAAAATTATGAAGGCAACTTTGGTTCT 863 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 873 GAGATTTGGGATATGTGATATGGTTGCAGTGGCTAAAATTATGAAGGCAACTTTGGTTCT 932 Query 864 TCCCTCACTTGATCACAGCTCATATTGGGCAGATGACAGTGGCTTTAAGGATCTATTTGA 923 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 933 TCCCTCACTTGATCACAGCTCATATTGGGCAGATGACAGTGGCTTTAAGGATCTATTTGA 992 Query 924 TTGGCAACACTTCATAGAGGAGTTGAAGGATGATATTCACATAGTTGAGATGCTGCCATC 983 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 993 TTGGCAACACTTCATTGAGGAGTTGAAGGATGATATTCACATAGTTGAGATGCTGCCATC 1052 Query 984 AGAATTAGCCGGAATTGAGCCTTTCGTTAAGACACCCATATCATGGTCTAAGGTTGGTTA 1043 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct 1053 AGAATTAGCCGGAATCGAGCCTTTCGTTAAGACACCCATTTCGTGGTCTAAGGTTGGTTA 1112 Query 1044 CTACAAGAGAGAGGTCCTTCCATTGTTGAAACAGCATATTGTAATGTACTTAACTCACAC 1103 |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1113 CTACAAGAAAGAGGTCCTTCCGTTGTTGAAACAGCATATCGTAATGTACTTAACTCACAC 1172 Query 1104 TGATTCTCGGCTCGCAAACAACGACCTGCCTGATTCTGTACAAAAGCTTCGTTGCCGAGT 1163 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1173 TGATTCTCGGCTTGCTAACAACGACCTGCCTGATTCTGTACAAAAGCTTCGTTGCCGAGT 1232 Query 1164 AAATTACAGGGCACTGAAATATTCAGCTCCAATAGAGGAACTGGGAAACGTTCTAGTTTC 1223 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1233 AAATTATAGGGCGCTGAAATATTCAGCTCCAATAGAGGAACTGGGAAACGTTCTAGTTTC 1292 Query 1224 TAGAATGAGGCAGAACAGAGGTCCATACCTTGCTCTTCATTTAAGG 1269 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1293 TAGAATGAGGCAGGACAGAGGTCCATACCTTGCTCTTCATTTAAGG 1338 Score = 1596 bits (864), Expect = 0.0 Identities = 980/1034 (95%), Gaps = 15/1034 (1%) Strand=Plus/Plus Query 1298 GGTATGAGAAGGATATGCTGGCTTTCACAGGCTGCAGTCATAGTTTGACAGCTGAAGAAG 1357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1337 GGTATGAGAAGGATATGCTGGCTTTCACAGGCTGCAGTCATAGTTTGACAGCTGAAGAAG 1396 Query 1358 ACGAAGAATTACGACAGATGCGGTATGAAGTTAGTCACTGGAAGGAAAAAGAAATAAATG 1417 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1397 ACGAAGAATTACGACAGATGCGGTATGAGGTTAGTCACTGGAAGGAAAAAGAAATAAATG 1456 Query 1418 GAACAGAGAGAAGATTGCAAGGTGGTTGTCCGTTGACTCCAAGGGAAACCTCGCTTTTAC 1477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 GAACAGAGAGAAGATTGCAAGGTGGTTGTCCGTTGACTCCAAGGGAAACCTCGCTTTTAC 1516 Query 1478 TAAGGGCTTTGGAATTCCCATCCAGCTCCCGGATTTACCTCGTAGCTGGTGAAGCATATG 1537 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1517 TGAGGGCTTTGGAATTCCCATCCAGCTCCCGGATATACCTCGTAGCTGGTGAAGCATATG 1576 Query 1538 GAAATGGAAGCATGGATCCTCTCAACACAGACTTCCCCAACATTTTCTCACATTCAATTC 1597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1577 GAAATGGAAGCATGGATCCTCTCAACACAGACTTCCCCAACATTTTCTCACATTCAATTC 1636 Query 1598 TTGCCACCAAAGAAGAGCTGAGTCCTTTTAATAACCACCAGAATATGTTGGCTGGTTTAG 1657 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1637 TTGCCACCAAAGAAGAGCTGAGTCCTTTTAACAACCACCAGAATATGTTGGCTGGTTTAG 1696 Query 1658 ATTATATTGTTGCACTTCAGAGTGAGGTATTTCTCTACACATATGATGGGAACATGGCAA 1717 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1697 ATTATATCGTTGCACTTCAGAGTGAGGTATTTCTCTACACATATGATGGGAACATGGCAA 1756 Query 1718 AAGCGGTTCAAGGTCACAGGCGATTCGAGGACTTCaaaaaaaCAATAAATCCAGACAAGA 1777 |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 1757 AAGCAGTTCAAGGTCACAGGCGATTCGAAGACTTCAAGAAAACAATAAATCCAGACAAGA 1816 Query 1778 TGAACTTTGTGAAACTTGTTGATGCGTTGGATGAGGGGAGAATTTCATGGAAAAAGTTCA 1837 ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| Sbjct 1817 TGAACTTTGTGAAACTTGTTGATGCATTAGATGAGGGAAGAATTTCATGGAAAAAGTTCA 1876 Query 1838 GTTCCAAAGTGAAAAAGCTACATAAAGACCGGAATGGAGCTCCATATAACAGAGAGCCGG 1897 ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||| Sbjct 1877 GTTCCAAAGTGAAAAAGCTACATAAAGACCGAAACGGAGCTCCATATAATAGAGAGTCGG 1936 Query 1898 GAGAGTTCCCGAAGCTGGAAGAGAGTTTTTACTCAAATCCTCTTCCCGGGTGTATTTGCG 1957 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | Sbjct 1937 GAGAGTTCCCGAAGCTGGAAGAGAGTTTCTACGCAAATCCTCTTCCCGGGTGTATTTGTG 1996 Query 1958 AGAATACAGAAGAAGAGGGTGTGATGCGACGTACATAAACATGGAGAGATGTTTCTGGTA 2017 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| Sbjct 1997 AGAATACAGAAGAAGAGGGTCTGATGCGACGTACATAAACATGGAGAGATGTCTCTAGTA 2056 Query 2018 ATATTATTT-AGTAGCCTGAGATTTACAGTTAGCaaaaaaaGAAGAAGAGAACTGTGATT 2076 ||||| ||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||| Sbjct 2057 ATATTTTTTTAGTAGCCTGAGATTTACAGTTAGCAAAAAA-GAAGAAGGGAATTGTGATT 2115 Query 2077 TTTTG-TGTCCTGAAGCTAGAGAGGGTGATGATTACCAAAGCTCAAGACT-AGAAAATGG 2134 ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct 2116 TTTTGGTGTCCTGAAGCTCGAGAGGGTGATGATTACCAAAGCTCAAGACTGAGAAACTGG 2175 Query 2135 TTTCAGAGACAGATTAGAGAAGTACGGAGACAGTATCTTACTGGAATCGTTTATAAGAAA 2194 |||||||||||||||||| || |||||||||||||||||||| |||||||||| ||| || Sbjct 2176 TTTCAGAGACAGATTAGAAAACTACGGAGACAGTATCTTACTAGAATCGTTTACAAGGAA 2235 Query 2195 GAAACTCCGCTCAATTGTTCATCATCAGTCCGATAAAGCTCGGCTTCAGCTATGCCATGG 2254 ||||||||||||||||||| | | | | ||||||||||| |||||||||||||||| Sbjct 2236 GAAACTCCGCTCAATTGTT-A-C--C-G----ATAAAGCTCGGATTCAGCTATGCCATGG 2286 Query 2255 AGATTTGTTGAAGTGGGTAAACAAAATAGGATTCACATTGTTTGTAACACT--ACAATTG 2312 |||||||||||||||| || || ||||||||||||||||||||||||||| ||||||| Sbjct 2287 AGATTTGTTGAAGTGGATACACCGAATAGGATTCACATTGTTTGTAACACTCTACAATTG 2346 Query 2313 TCATTGTTCTTTTA 2326 ||| | || ||||| Sbjct 2347 TCACTATTTTTTTA 2360 Score = 76.8 bits (41), Expect = 9e-13 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 2316 TTGTTCTTTTACACGCATTAATAACATAGAATATATATTTCTGC 2359 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2381 TTGTTCTTTTACACGCATTAATAACATAGAATATATATTGCTGC 2424 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 117117871485 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5