BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493629
Length=2554
Score E
Sequences producing significant alignments: (Bits) Value
AT5G35700.1 | Symbols: FIM2, FIM5 | fimbrin-like protein 2 | ch... 4095 0.0
AT2G04750.1 | Symbols: | Actin binding Calponin homology (CH) ... 1655 0.0
> AT5G35700.1 | Symbols: FIM2, FIM5 | fimbrin-like protein 2 |
chr5:13872535-13876857 REVERSE LENGTH=2568
Length=2568
Score = 4095 bits (2217), Expect = 0.0
Identities = 2463/2577 (96%), Gaps = 35/2577 (1%)
Strand=Plus/Plus
Query 1 TGTCATATCATTCCATTTCGTCGCAGGTCGTGCGCTCGAAAAACTCAACAC-AAATTCAT 59
||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1 TGTCAAATCATTCCATTTCATCGCAGGTCGTGCGCTCGAAAAACTCAACACGAAATTCAT 60
Query 60 TATTTCCAAATAGATCTC--TTTGAGCTTCAAAGATCAAAACTTTATCC-GCA-GAA-AT 114
|||||| ||| ||||||| ||| ||||||||||||||||||||||||| | | || |
Sbjct 61 TATTTCGAAACAGATCTCTTTTTAAGCTTCAAAGATCAAAACTTTATCCTG-ATAAAGAG 119
Query 115 AATATGAACACCAATCACATTCAATCTCTGAATCTTCTCTAAGGGATTTGTTTTGTCTTG 174
||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 120 AATATGAACACGAACCACATTCAATCTCTCAATCTGCTCTAAGGGATTTGTTTTGTCTTG 179
Query 175 ATTCTGCGGAGAGAAATCGA-TAG--AAAATGTCTAGTTACGTTGGTGTTCTTGTCTCTG 231
||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 180 ATTCTGC-G-GAGAAATCGATTAGAAAAAATGTCTAGTTACGTTGGTGTTCTTGTCTCTG 237
Query 232 ATCCATGGTTACAGAGCCAATTTACACAAGTGGAATTGCGTACCCTTAAATCTAAGTTTG 291
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 ATCCTTGGTTACAGAGCCAATTTACACAAGTGGAATTGCGTACCCTTAAATCTAAGTTTG 297
Query 292 TTTCGAACAAAACTCAATTA-GAGCGTTTTACTGTCGGAGATTTACCACCTGTGTTCTCA 350
|||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||| |
Sbjct 298 TTTCGAACAAAACTCAATTAGGA-CGTTTCACTGTCGGAGATTTACCACCTGTTTTCGAA 356
Query 351 AAGTTGAAAGCTTTTAACGGTACCATTGATGAGGATGAGATCAAATCTGTATTGGACAAG 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 AAGTTGAAAGCTTTTAACGGTACCATTGATGAGGATGAGATCAAATCTGTATTGGACAAG 416
Query 411 TCTTATTCCAATGCTGATGATGAAGTCGATTTTGAGACCTTTCTCCGGGCCTTTTTAAAT 470
|||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |
Sbjct 417 TCTTATCCCAATGCTGATGATGAAGTCGATTTTGAGTTCTTTCTTCGGGCCTTTTTAAGT 476
Query 471 GTGCAAGCCCGAGGAGTTGAAAAAACAGGAGGATCTAAAGGTTCTTCTTCATTCCTCAAA 530
|||||||| ||||||||||| ||| ||||||| || |||||| |||||||||||||||||
Sbjct 477 GTGCAAGCACGAGGAGTTGAGAAATCAGGAGGGTCAAAAGGTGCTTCTTCATTCCTCAAA 536
Query 531 ACCAGTACTACAACGGTTCATCATGCCATCAATGAATCCGAGAAGGCTTCCTATGTTTCC 590
||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||
Sbjct 537 ACCAGTACTACAACGGTGCACCATGCGATCAATGAATCCGAGAAGGCTTCTTATGTTTCG 596
Query 591 CATATCAATAATTACTTGAGAGATGATCCTTTCTTGAAGAGCTATCTTCCTATCGATCCC 650
||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 597 CATGTTAATAATTACTTGAGAGATGATCCTTTCTTGAAGAGCTATCTTCCTATTGATCCC 656
Query 651 GCAACTAATGCTTTCTTTGATCTTGTTAAAGATGGTGTTCTTTTGTGTAAGCTTATAAAT 710
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 GCAACAAATGCTTTCTTTGATCTTGTTAAAGATGGTGTTCTTTTGTGTAAGCTTATAAAT 716
Query 711 GTTGCTGTTCCTGGGACCATCGATGAACGAGCTATCAACACAAAGAAAACGCTTAACCCA 770
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 717 GTTGCTGTTCCTGGGACCATCGACGAACGAGCTATCAACACAAAGAAAACGCTTAACCCA 776
Query 771 TGGGAGAGGAATGAGAACCTTACTTTAGGTCTCAATTCTGCCAAAGCTATTGGCTGCACA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 TGGGAGAGGAATGAGAACCTTACTTTAGGTCTCAATTCTGCCAAAGCTATTGGCTGCACA 836
Query 831 GTGGTCAACATTGGAACACAGGACATAGCTGAAGGAAGACCATATCTCGTACTTGGGTTG 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 GTGGTCAACATTGGAACACAGGACATAGCTGAAGGAAGACCATATCTCGTACTTGGGTTG 896
Query 891 ATATCTCAGATTATAAAGATCCAAATGTTGGCTGATCTCAATTTTAAGAAAACGCCTTCG 950
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 897 ATATCTCAGATTATAAAGATCCAAATGTTGGCTGATCTCAATTTTAAGAAAACTCCTTCG 956
Query 951 CTTTTTCAATTGGTAGACGACACTCAGGATGCGGAGGAGCTCATGGGACTGGCTCCCGAA 1010
||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||| |||
Sbjct 957 CTTTTTCAACTGGTGGACGACACTCAGGATGCAGAGGAGCTCATGGGATTGGCTCCTGAA 1016
Query 1011 AAAGTTTTGCTAAAATGGATGAATTTCCATCTAAAGAAAGCTGGTTATGAAAAGCAGGTT 1070
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1017 AAAGTTTTGCTAAAATGGATGAATTTCCATCTGAAGAAAGCTGGTTATGAAAAGCAGGTT 1076
Query 1071 ACAAATTTTTCTTCTGATGTGAAGGACGGTGAGGCATATGCATATCTGCTTAATGCCCTT 1130
|| ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct 1077 ACGAATTTTTCTTCTGATTTGAAGGACGGTGAGGCATATGCGTACCTGCTTAATGCCCTT 1136
Query 1131 GCTCCAGAACACAGTACACATGTGGCATTGGAGACCAAAGACCCCACAGAAAGAGCGAAA 1190
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1137 GCTCCAGAACACAGTACACATGTGGCATTAGAGACCAAAGACCCCACAGAAAGAGCGAAA 1196
Query 1191 AAGGTTCTTGAGCAGGCTGAGAAGCTGGATTGTAAACGATACCTTTCTCCAAAAGACATA 1250
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1197 AAGGTTCTTGAGCAGGCTGAGAAGCTGGATTGTAAACGATACCTTTCTCCCAAAGACATA 1256
Query 1251 GTGGACGGCTCAGCAAATCTTAACCTTGCATTTGTGGCGCAAATATTTCAGCACAGGAAT 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 GTGGACGGCTCAGCAAATCTTAACCTTGCATTTGTGGCGCAAATATTTCAGCACAGGAAT 1316
Query 1311 GGATTGACTGTTGACGATTCAAAGACATCATTTGCTGAGATGATGACAGATGATGTGGAA 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 GGATTGACTGTTGACGATTCAAAGACATCATTTGCTGAGATGATGACAGATGATGTGGAA 1376
Query 1371 ACTTCACGAGAAGAAAGATGTTTCCGCCTCTGGATTAACAGTCTTGGCACAGCCACTTAT 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 ACTTCACGAGAAGAAAGATGTTTCCGCCTCTGGATTAACAGTCTTGGCACAGCCACTTAT 1436
Query 1431 GTCAATAATGTTTTTGAGGATCTTAGGAATGGGTGGGTTCTTCTTGAAGTTCTCGACAAA 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 GTCAATAATGTTTTTGAGGATCTTAGGAATGGGTGGGTTCTTCTTGAAGTTCTCGACAAA 1496
Query 1491 GTTTCACCTGGCTCGGTCAACTGGAAACACGCAAATAAACCTCCCATAAAAATGCCATTC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 GTTTCACCTGGCTCGGTCAACTGGAAACACGCAAATAAACCTCCCATAAAAATGCCATTC 1556
Query 1551 AAAAAGGTTGAGAACTGCAATGAAGTTATAAAGATTGGGAAGGAACTGCGCTTTTCCCTT 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1557 AAAAAGGTTGAGAACTGCAATGAAGTTATAAAGATTGGGAAGGAACTGCGCTTTTCCCTT 1616
Query 1611 GTCAATGTAGCTGGGAATGACATTGTGCAAGGAAATAAGAAACTTCTTCTCGCTTTTTTG 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1617 GTCAATGTAGCTGGGAATGACATTGTGCAAGGAAATAAGAAACTTCTTCTCGCATTTTTG 1676
Query 1671 TGGCAACTAATGAGATATACAATGCTCCAACTTCTGAAGAACTTGAGATCTCACTCGCAA 1730
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1677 TGGCAACTAATGAGATATACAATGCTCCAACTTCTGAGGAACTTGAGATCACACTCGCAA 1736
Query 1731 GGTAAAGAAATTACAGATGTAGATATTCTTAACTGGGCGAATAGGAAAGTGAAGAGAGGG 1790
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1737 GGTAAAGAAATTACAGATGCAGATATTCTTAACTGGGCGAATAGGAAAGTGAAGAGAGGT 1796
Query 1791 GGCCGAACTAGTCAGGCTGATAGCTTCAGGGACAAGAATCTGTCAAGTGGAATGTTCTTT 1850
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1797 GGCCGAACTAGTCAGGCTGATAGCTTCAGGGACAAGAATCTGTCTAGTGGAATGTTCTTT 1856
Query 1851 CTGGAACTTCTTAGTGCGGTAGAGCCAAGAGTTGTCAACTGGAGCCTCGTTACCAATGGA 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 CTGGAACTTCTTAGTGCGGTAGAGCCAAGAGTTGTCAACTGGAGCCTCGTTACCAATGGA 1916
Query 1911 GAAACAGAGGAAGATAAGAAGTTGAATGCCACATACATCATCAGTGTGGCACGAAAGCTC 1970
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1917 GAAACAGAGGAGGATAAGAAGTTGAATGCCACATACATCATCAGTGTTGCACGAAAGCTT 1976
Query 1971 GGATGCTCCATATTCTTGTTACCTGAGGATATCATAGAGGTGAACCAGAAGATGATGCTT 2030
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1977 GGATGTTCCATATTCTTGTTGCCTGAAGATATCATAGAGGTGAACCAGAAGATGATGCTT 2036
Query 2031 ATTTTGGCAGCCAGCATCATGTACTGGAGCCTCCAACAACAATCAGACACAGAGTCTACT 2090
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 ATCTTGGCAGCCAGCATCATGTACTGGAGCCTCCAACAACAATCAGACACAGAGTCTACT 2096
Query 2091 GTCTCAGAAGACGCCACTGATGATGGCGACGCAAACTCTGTTGCTGGTGAAATCTCCAAT 2150
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 2097 GTCTCAGAAGACGCCACTGATGATGGCGACGCAAACTCTGTAGCGGGTGAAATCTCCAAT 2156
Query 2151 TTGTCCATTGATGGGGCTTCTGAGTCCAGTCCCACTGTCCAAGACCAAGAATTGCTGACG 2210
|||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 2157 TTGTCCATTGATGGAGCTTCCGAGTCCAGTCCCACTGTCCAAGATCAAGAATTGCTGACG 2216
Query 2211 AAGGCAGAGAAGGATGAGGACGAGGTTGATGGTGAGAATAATAAAGATGCATAACGCGTT 2270
|||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 2217 AAGGCAGACAATGATGAGGATGAGGTTGATGGTGAGAATAATAAAGATGCATGACGCGTT 2276
Query 2271 TGAAT-TT------GATCGTTGTTTTT-GGTTTATTGCGTGAAGTTTTGATTGGCACAAA 2322
||||| || ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2277 TGAATGTTTATTTTGATCGTTGTTTTTTGGTTTATTGCGTGAAGTTTTGATTGGCACAAA 2336
Query 2323 GGAAACCCAAAGAAAGAAAGAAGAACAAGGTTTGAT--GTATACAAACAAAGAGGGTTTT 2380
|||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct 2337 GGAAACACAAAGAAAGAA-GAA---CAAGGTTTGATATGTATACAAACAAAGAGGGTTTT 2392
Query 2381 GGTACACAAGTTTTACATTGTGTACGTAAACCTCATTTTTGAATTGTGAAAGTTCTACtt 2440
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2393 GGTACACAAGTTTTACATTGTGTACGTAAACCTCATTTTTGAATTGTTAAAGTTCTACTT 2452
Query 2441 tattttattttatttattggacattttttttttgttgatttccagtttcatttttgtttA 2500
||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct 2453 TATTTTATTTTGTTTATTGGACCTTTTTTTTTTC---ATTTCCAATTTCATTTTTGTTTA 2509
Query 2501 TCACCGGTCTAAACTCGAAAT---ATAACTGTTTTAGGCAGAAAACAATAACATTTA 2554
||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct 2510 TCACCGGTCTAAACTCGAAATTGTATAATTGTTT-AGGCAGAAAACAATAACATTTA 2565
> AT2G04750.1 | Symbols: | Actin binding Calponin homology (CH)
domain-containing protein | chr2:1659762-1662748 REVERSE LENGTH=1959
Length=1959
Score = 1655 bits (896), Expect = 0.0
Identities = 1594/1925 (83%), Gaps = 72/1925 (4%)
Strand=Plus/Plus
Query 201 ATGTCTAGTTACGTTGGTGTTCTTGTCTCTGATCCATGGTTACAGAGCCAATTTACACAA 260
||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct 1 ATGTCTAGTTACGTTGGTGTTCTTGTCTCTGATCCATGGCTACAAAGCCAATTCACACAA 60
Query 261 GTGGAATTGCGTACCCTTAAATCTAAGTTTGT-TTCGAAC-AAAACTCAATTAGAG-CGT 317
||||| || || || |||||||| |||||| | |||| || ||||||| ||| | | |||
Sbjct 61 GTGGAGTTACGCACTCTTAAATCCAAGTTT-TATTCG-ACAAAAACTCGATTCG-GTCGT 117
Query 318 TTTACTGTCG-GAGATTTACCACCTGTGTTCT-CAAAGTTGAAAGCTTTTAACGGTACCA 375
| ||||| | | |||||||||| ||||| | ||||||||||| ||| || || |
Sbjct 118 GTCACTGT-GAAACATTTACCACCAGTGTT-TGCAAAGTTGAAATATTTCAATGGCAAGT 175
Query 376 TTGATGAGGATGAGATCAAATCTGTATTGGACAAGTCTTATTCCAAT-GCTGATGATGAA 434
||||||| ||||||||||| || ||||||| |||||||| ||||| || | | | |||
Sbjct 176 TTGATGAAAATGAGATCAAAACTATATTGGATGAGTCTTATCCCAATCGC-GCTAAGGAA 234
Query 435 GTCGATTTTGAGACCTTTCTCCGGGCCTTTTTAAATGTGCAAGCCCGAGGAGTTGAAAAA 494
|| || || || |||||||||||||||||||||| ||||||| |||||||| | |
Sbjct 235 GTTGAATTCGAAACCTTTCTCCGGGCCTTTTTAAGTGTGCAATCCCGAGGA--T----CA 288
Query 495 ACAGGAGGATCTAAAGGTTCTTCTTCATTCCTCAAAACCAGTACTACAACGGTT-CATCA 553
| | ||| | | |||| || || ||||| || ||||||||||| ||| |||||
Sbjct 289 A-A--AGG--C-----G--CTTCATCGTTTCTCAAGACAAGTACTACAAC-GTTCCATCA 335
Query 554 -TGCCATCAATGAATCCGAGAAGGCTTCCTATGTTTCCCATATCAATAATTACTTGAGAG 612
| | || || ||||||||||| ||||| ||||| || |||||||||| ||| |||| ||
Sbjct 336 CT-CGATAAACGAATCCGAGAAAGCTTCATATGTGTCACATATCAATAGTTATTTGAAAG 394
Query 613 ATGATCCTTTCTTGAAGAGCTATCTTCCTATCGATCCC-GCAACTAATGCTTTCTTTGAT 671
|||| ||| |||||||||||||||||| ||| | ||| | || |||||||| ||||||
Sbjct 395 ATGAACCTAACTTGAAGAGCTATCTTCCAATC-AACCCTACTACAAATGCTTTGTTTGAT 453
Query 672 CTTGTTAAAGATGGTGTTCTTTTGTGTAAGCTTATAAATGTTGCTGTTCCTGGGACCATC 731
|||||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||
Sbjct 454 CTTGTTAAAGATGGTGTTCTTTTGTGTAAGCTTATAAACATCGCTGTGCCTGGGACTATA 513
Query 732 GATGAACGAGCTATCAACACAAAGAAA-ACGCTTAACCCATGGGAGAGGAA-TGAGAACC 789
|| ||| |||| || |||||||||||| | ||||| |||||||| || || ||| || |
Sbjct 514 GACGAAAGAGCGATAAACACAAAGAAAGAA-CTTAATCCATGGGAAAG-AACTGAAAATC 571
Query 790 TTACTTTAGGTCTCAATTCTGCCAAAGCTATTGGCTGCACAGTGGTCAACATTGGAACAC 849
|| | || ||||||| ||||| || || ||||||||||| || |||||||||||||| |
Sbjct 572 TTTCACTATGTCTCAACTCTGCTAAGGCAATTGGCTGCACTGTAGTCAACATTGGAACTC 631
Query 850 AGGACATAGCTGAAGGAAGACCATATCTCGTACTTGGGTTGATATCTCAGATTATAAAGA 909
||||||| |||||||||| |||| |||| ||||| |||||||| | ||||||||||||||
Sbjct 632 AGGACATTGCTGAAGGAACACCACATCTTGTACTAGGGTTGATCTTTCAGATTATAAAGA 691
Query 910 TCCAAATGTTGGCTGATCTCAATTTTAAGAAAACGCCTTCG-CTTTTTCAATTGGTAGAC 968
||||| ||||||||||||||||| |||||||||| || | ||| || | ||||| ||
Sbjct 692 TCCAATTGTTGGCTGATCTCAATCTTAAGAAAACTCCA-CAACTTGTTGAGTTGGTGGAA 750
Query 969 GACA-CTCAGGATGCGGAGGAGCTCATGGGACTGGCTCCCGAAAAAGTTTTGCTAAAATG 1027
|| | | ||||||| ||||||||| |||||||| ||||| || ||| |||||||||||||
Sbjct 751 GAAAAC-CAGGATGTGGAGGAGCTTATGGGACTAGCTCCTGAGAAACTTTTGCTAAAATG 809
Query 1028 GATGAATTTCCATCTAAAGAAAGCTGGTTATGA-AAAGCAGGTTACAAATTTTTCTTCTG 1086
||||||||| ||||| ||||||||||||||||| ||| || || || ||||| |||||||
Sbjct 810 GATGAATTTTCATCTTAAGAAAGCTGGTTATGAGAAA-CAAGTAACCAATTTCTCTTCTG 868
Query 1087 ATGTGAAGGACGGTGAGGCATATGCATATCTGCTTAATGCCCTT-GCTCCAGAACACAGT 1145
|||| ||||| || |||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct 869 ATGTTAAGGATGGAGAGGCATATGCATACCTGCTCAATGCT-TTAGCTCCAGAACACAGT 927
Query 1146 ACACATGTGGCATTGGAGACCAAAGACCCCACAGAAAGAGCGAAAAAGGTTCTTGAGCAG 1205
||| |||| |||| |||| |||||||| |||||||||||| ||||||||||||||
Sbjct 928 ACAAATGTCACATTAGAGATTAAAGACCCTTCAGAAAGAGCGACGAAGGTTCTTGAGCAA 987
Query 1206 GCTGAGAAGCTGGATTGTAAACGATACCTTTCTCCAAAAGACATAGTGGACGGCTCAGCA 1265
|| ||||||||||| |||||| ||| ||||||||| ||||| ||||| || ||||| |||
Sbjct 988 GCAGAGAAGCTGGACTGTAAAAGATTCCTTTCTCCTAAAGATATAGTTGAAGGCTCTGCA 1047
Query 1266 AATCTTAACCTTGCATTTGTGGCGCAAATATTTCAGCACAGGAATGGATTGACTGTTGAC 1325
|||||||| |||||||||||||| ||| | ||||| ||||||||||||||| ||| |||
Sbjct 1048 AATCTTAATCTTGCATTTGTGGCACAACTGTTTCACCACAGGAATGGATTGTCTGATGA- 1106
Query 1326 GATTC-AAAGA--C--ATCA-T-TTGCTGAGATGATGACAGATGATGTGGAAACTTCACG 1378
|| || |||| | ||| | ||||||||||| | ||||| |||| |||||||| ||
Sbjct 1107 GAGTCCAAAGGTGCCTATCTCTGTTGCTGAGATGGTCACAGAAGATGAAGAAACTTCTCG 1166
Query 1379 AGAAGAAAGATG-TTTCCGCC-TCTGGATTAACAGTCTTGGCACAGCCACTTATGTCAAT 1436
|||||||||||| |||| ||| | ||||| |||||||| || | | ||||||||| ||
Sbjct 1167 AGAAGAAAGATGCTTTC-GCCAT-TGGATGAACAGTCTCGGTGCTGTGACTTATGTCGAT 1224
Query 1437 AATGTTTTTGAGGATCTTAGGAATGGGTGGGTTCTTCTTGAAGTTCTCGACAAAGTTTCA 1496
|||||||| |||||| |||| ||||| |||||||||||||||||||| |||||||| |||
Sbjct 1225 AATGTTTTCGAGGATGTTAGAAATGGATGGGTTCTTCTTGAAGTTCTTGACAAAGTATCA 1284
Query 1497 CCTGGCTCGGTCAACTGGAAACACGCAAATAAACCTCCCATAAAAATGCCATTCAAAAAG 1556
|| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||
Sbjct 1285 CCAGGCTCGGTCAACTGGAAGCACGCGAATAAACCTCCCATTAAAATGCCATTCAAGAAG 1344
Query 1557 GTTGAGAACTGCAATGAAGTTATAAAGATTGGGAAGGAACTGCGCTTTTCCCTTGTCAAT 1616
|||||||| || || ||||||| ||||||||||| ||| || ||| || |||||||||
Sbjct 1345 GTTGAGAATTGTAACCAAGTTATCAAGATTGGGAAAGAATTGAACTTCTCGCTTGTCAAT 1404
Query 1617 GTAGCTGGGAATGACATTGTGCAAGGAAATAAGAAACTTCTTCTCGCTTTTTTGTGGCAA 1676
|||||||| |||||||| |||||||||| ||||| || ||||||||||||||||||||
Sbjct 1405 GTAGCTGGTCATGACATTATGCAAGGAAACAAGAAGCTACTTCTCGCTTTTTTGTGGCAG 1464
Query 1677 CTAATGAGATATACAATGCTCCAACTTCTGAAGAACTTGAGATCTCACTCGC-AAGGTAA 1735
| |||||||| |||||||||||| | ||||| |||||||| ||||||| || |||||||
Sbjct 1465 TTGATGAGATACACAATGCTCCAAATCCTGAACAACTTGAGGTCTCACT-GCCAAGGTAA 1523
Query 1736 AGAAATTACAGATGTAGATATTCTTAACTGGGCGAATAGGAAAGTGAAGAGAGGGGGCCG 1795
||| || ||||| | ||||||||| |||||||| ||||||||||| |||| | | || ||
Sbjct 1524 AGATATCACAGAGGCAGATATTCTAAACTGGGCAAATAGGAAAGTCAAGAAAAGTGGTCG 1583
Query 1796 AAC-TAGTCAGGCTGAT-AGCTTCAGGGACAAGAATCTGTCAAGTGGAATGTTCTTTCTG 1853
||| | ||| |||| | ||||||| ||||||||||||| ||| |||||| |||||| |
Sbjct 1584 AACCTC-TCAAGCTG-TGAGCTTCAAGGACAAGAATCTGGCAAATGGAATCTTCTTTTTA 1641
Query 1854 GAACTTCTT-AGTGCGGTAGAGCCAAGAGTTGTCAACTGGAGCCTCGT-TACCAATGGAG 1911
|| ||| || ||||| ||||||||||||||||| |||||||| || || | |||| ||||
Sbjct 1642 GAGCTT-TTGAGTGCTGTAGAGCCAAGAGTTGTAAACTGGAGTCTTGTAT-CCAAAGGAG 1699
Query 1912 AAACAGAGGAAGATAAGAAGTTGAATGCCACATACATCATCAGTGTGGCACGAAAGCTCG 1971
||||| | || || ||||| |||||||| ||||||||||| ||||| ||| | ||||| |
Sbjct 1700 AAACACAAGAGGAAAAGAATTTGAATGCAACATACATCATAAGTGTTGCAAGGAAGCTTG 1759
Query 1972 GATGCTCCATATTCTTGTTACCTGAGGATATCATAGAGGTGAACCAGAAGA-TGATGCTT 2030
||||||| || |||||| | ||||||||||| ||||||| ||||||| || ||||||||
Sbjct 1760 GATGCTCAATCTTCTTGCTGCCTGAGGATATTTTAGAGGTAAACCAGA-GAATGATGCTT 1818
Query 2031 ATTTTGGCAGCCAGCATCATGTACTGGAGCCTCCAACAACAATCAGACACAGAGTCTACT 2090
|| || || || || |||||| |||||||||| || |||||||||||||| || ||||||
Sbjct 1819 ATATTAGCTGCTAGTATCATGAACTGGAGCCTTCAGCAACAATCAGACACTGAATCTACT 1878
Query 2091 GTCTC 2095
|||||
Sbjct 1879 GTCTC 1883
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126771864961
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5