BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493640
Length=2226
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43730.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1528 0.0
AT1G51480.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1476 0.0
AT5G43740.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1419 0.0
> AT5G43730.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:17560179-17562929 FORWARD LENGTH=2751
Length=2751
Score = 1528 bits (827), Expect = 0.0
Identities = 988/1063 (93%), Gaps = 21/1063 (2%)
Strand=Plus/Plus
Query 436 GAGAAGAAGCATATCCAAACCACAATTGGTTTGGATACAATGGTTGGAAAT-GTATGGGA 494
|||||||||||||| ||||||||| |||||||||||||||||||||| ||| | ||||||
Sbjct 524 GAGAAGAAGCATATACAAACCACAGTTGGTTTGGATACAATGGTTGG-AATAGCATGGGA 582
Query 495 AAGCCTCATGA-ACGATGAAATAAGAACCTTGGGTCTTTATGGTATGGGGGGTGTAGGAA 553
||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 583 AAGCCTCAT-AGACGATGAAATAAGAACCTTGGGTCTTTATGGTATGGGGGGAATAGGAA 641
Query 554 AAACCACCCTCTTAGCTTGTATCAACAACAAATTTGTTGAGCTGGAGAGTGAATTTGATG 613
||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct 642 AAACCACCCTCTTAGAAAGTCTCAACAACAAATTTGTTGAACTGGAGAGTGAATTTGATG 701
Query 614 TTGTGATATGGGTTGTGGTATCAAAAGAGTTTCAGTTCGAGGGCATTCAAGATCAGATTC 673
| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct 702 TAGTGATATGGGTTGTGGTATCTAAAGACTTTCAGTTGGAGGGCATTCAAGATCAGATTC 761
Query 674 TTGGAAGAATACGTCTTGACAAGGAATGGGAAAGAGAAACTGAAAATAAGAAAGCCTCTC 733
| || ||| |||||| |||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 762 TGGGGAGATTACGTCCTGACAAGGAATGGGAAAGAGAAACAGAAAGTAAGAAAGCCTCTC 821
Query 734 TCATAAACAATAACCTTAAGAGAAAGAAATTTGTGCTGTTGTTGGATGATATATGGAGC- 792
||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct 822 TCATAAACAATAACCTTAAGAGAAAGAAATTTGTGTTGTTGTTGGATGATCTCTGGAGCG 881
Query 793 AAGGTAGATCTG-TACAAGATAGGAGTTCCAGCTCCAACTCGAGAAAATGGATCGAAGAT 851
||| ||||||| | ||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 882 AAG-TAGATCTAATT-AAGATAGGAGTTCCACCTCCAAGTCGAGAAAATGGATCGAAGAT 939
Query 852 AGTTTTCACCAGACGTTCAAAGGAAGTTTGCAAGTACATGAAAGCTGACGAGCAGATAAA 911
||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 940 AGTTTTCACCACACGTTCAAAGGAAGTTTGCAAGCACATGAAAGCTGACAAGCAGATAAA 999
Query 912 AGTTGATTGTTTGTCACCAGTTGAAGCGTGGGAATTGTTTCGAATTACTATTGGAGATAT 971
|||||| ||||||||||||| |||||||||||||||||||||| | ||| ||||||||||
Sbjct 1000 AGTTGACTGTTTGTCACCAGATGAAGCGTGGGAATTGTTTCGACTCACTGTTGGAGATAT 1059
Query 972 CATATTAAGCAGCCATCAGGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATGTCA 1031
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1060 CATATTAAGGAGCCATCAAGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATGCCA 1119
Query 1032 TGGCTTGCCACTTGCACTCAATGTCATTGGGGAAA-CCATGGCATGTAAAGATACTATAC 1090
|||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||| |||
Sbjct 1120 TGGCTTGCCACTTGCACTCAATGTCATTGGC-AAAGCCATGGTATGTAAAGAGACTGTAC 1178
Query 1091 AAGAATGGCGTCATGCGATTAATGTTCTGAATTCACCTGGCCACAAATTTCCAG--A--- 1145
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
Sbjct 1179 AAGAATGGCGTCATGCGATTAATGTTCTGAATTCGCCTGGCCACAAGTTTCCAGGTATGG 1238
Query 1146 AAGAA----TTCTTCGCGTTTTGAAGTTCAGTTATGATAGCTTGAAGAATGGTGAAAATC 1201
||||| |||||| | ||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1239 AAGAAAGAATTCTTCCCATTTTGAAGTTCAGTTATGATAGCTTAAAGAATGGTGAAA-TC 1297
Query 1202 AA-TCGTGCTTCCTATATTGTTCTTTGTTTCCTGAGGATTTTGAAATAGAGAAGGAGAAG 1260
|| | ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct 1298 AAATTGTGCTTCCTATATTGTTCTCTGTTTCCTGAAGATTTTGAAATAGAGAAGGATAAG 1357
Query 1261 TTGATAGAATACTGGATTTGCGAAGGATATATAAATACGAACAGATATGAAGATGGAGGT 1320
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1358 TTGATAGAATATTGGATTTGCGAAGGATATATAAATCCGAACAGATATGAAGATGGAGGT 1417
Query 1321 ACCAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAATGT 1380
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 ACTAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAATGT 1477
Query 1381 GAACTCACAGACAAAGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATAAAT 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1478 GAACTCACAGACAAAGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATAAAT 1537
Query 1441 TCTGACTTCGGAAATCAGCAAGAAACAATTTGTGTGAAATCTG 1483
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1538 TCTGACTTCGGAAATCAGCAAGAAACAATTTGTGTGAAATCTG 1580
Score = 717 bits (388), Expect = 0.0
Identities = 540/610 (89%), Gaps = 23/610 (4%)
Strand=Plus/Plus
Query 1483 GTCCCAACTGCCCCAACCTTTCAAGTTTCAACCCTATTACTCCCGTATAACAAGTTGGTG 1542
|||||||||||||||| | | ||||||||||||||||||| |||||||||||||||
Sbjct 1674 GTCCCAACTGCCCCAA-C---C---TTTCAACCCTATTACTCCCATATAACAAGTTGGTG 1726
Query 1543 AATATTTCAGTTGGATTCTTTCGGGTTATGCCAAAACTTGTGGTCTTGGATCTTTCTACA 1602
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1727 GATATTTCAGTTGGATTCTTTCTGTTTATGCCAAAACTTGTGGTCTTGGATCTTTCTACA 1786
Query 1603 AACATG-AGTCTTATTGAATTGCCGGAAGAAATTTCTAACTTATGTTCCCTGCAATATCT 1661
||| || ||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct 1787 AAC-TGGAGTCTTATTGAATTGCCGGAAGAAATTTCTAACCTAGGCTCCCTGCAATATCT 1845
Query 1662 CAATTTATCAAGCACAAGGATAAAATCGCTACCGGTTGGT---AAG---TTGAGGAAACT 1715
|||||||||| |||| |||||||||||||||| |||||| ||| |||||||||||
Sbjct 1846 CAATTTATCACTCACAGGGATAAAATCGCTACCAGTTGGTCTGAAGAAGTTGAGGAAACT 1905
Query 1716 AATCTACTTGAATCTGGAGTTCAGTTATAAACTTGAGAGTCTTGTTGGGATCGCAGCAAC 1775
||||||||||||||||||||||| | || |||||||||||||||||| || ||| ||||
Sbjct 1906 AATCTACTTGAATCTGGAGTTCACTAATGTACTTGAGAGTCTTGTTGGAATAGCAACAAC 1965
Query 1776 CTTACCAAATCTGCAAGTGTTGAAATTATTTTATTCCCATGTTTGTGTTGATGACAGA-T 1834
||||||||||||||||||||||||||||||||||| | | ||||||||||||||| | |
Sbjct 1966 TTTACCAAATCTGCAAGTGTTGAAATTATTTTATTCTCTTTTTTGTGTTGATGACATAAT 2025
Query 1835 TAATGGAGGAACTAGAGCACTTGGAGCA-TATGAAGATTTTAGCGGTAACTATAGAGGAT 1893
|| ||||||||||| ||| |||| |||| | ||||||||||| | | ||| |||||||||
Sbjct 2026 TA-TGGAGGAACTACAGCGCTTGAAGCACT-TGAAGATTTTAACAGCAACCATAGAGGAT 2083
Query 1894 GCCATGATTTTGGAAAGGATACAAGGAATGGACCGATTGGCGAGTAGTATTCGAAGTTTA 1953
|||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||
Sbjct 2084 GCCATGATTTTGGAAAGGGTACAAGGAGTTGACCGATTGGCGAGTAGTATTCGAGGTTTA 2143
Query 1954 TGTCTAATAAATATGTCAACACCTCGTGTAATATTAAGCACGACAGCTCTGGGAAGTCTT 2013
||||||| ||| |||||| |||||||||||||||||| | || |||||||||| |||||
Sbjct 2144 TGTCTAAGAAACATGTCAGCACCTCGTGTAATATTAAACTCGGTAGCTCTGGGAGGTCTT 2203
Query 2014 CAACAACTTGCAGTTAG-GAGCTGCAACATATCCGAGATA-ACGATAGATTGGGAAAGCA 2071
|||||||||| | || | ||||||||||||||| |||||| | |||||||||| |||||
Sbjct 2204 CAACAACTTGGAATT-GTGAGCTGCAACATATCTGAGATAGA-GATAGATTGGTTAAGCA 2261
Query 2072 AAGAAAGAAG 2081
||||||||||
Sbjct 2262 AAGAAAGAAG 2271
Score = 590 bits (319), Expect = 2e-167
Identities = 398/436 (91%), Gaps = 6/436 (1%)
Strand=Plus/Plus
Query 1 TTGTTTCCTGCATCGCCTTGGCAGTAATCCCGGGGGTTTCTTTCTTGAAGTTTGAGCAAA 60
||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| |||||
Sbjct 29 TTGTTTCTTGCATCGCCTTGGCAGTAATCTCGGGGGTTTCTTTCTTAAAGTTTGTGCAAA 88
Query 61 ATGGCGGACTGGC-TTCTACTAATACCCTGGAATAAAATCTTCACTGCTGCATGTGGCTG 119
|||| |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 89 ATGGTGGACTGGCTTTC-ACTATTACCCTGGAATAAAATCTTCACTGCTGCATGTGGCTG 147
Query 120 CTTTTTAAGCGATAGAAACTACATTCACTTGATGGAGTCAAATCTCGATGCTCTGGAGAC 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 148 CTTTTTAAGCGATAGCAACTACATTCACTTGATGGAGTCAAATCTCGATGCTCTGCAGAA 207
Query 180 AACTATGGACGAACTTAAGAATAGACGAGATGATCTGTTAGGAAGAGTCGCCATAGAAGA 239
||||||||| |||||||||||| | |||||||||||||||| |||||| ||||||||||
Sbjct 208 AACTATGGAAGAACTTAAGAATGGGCGAGATGATCTGTTAGCAAGAGTTTCCATAGAAGA 267
Query 240 AGATAAAGGTTTGCAACGGCTTGCTCAAGTCAACGGATGGCTTTCAAGGGTAAAAAGTGT 299
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||
Sbjct 268 AGATAAAGGTTTGCAACGGCTTGCTCTAGTCAACGGATGGCTTTCAAGGGTACAAATTGT 327
Query 300 TGAATCCCAATTCAATGATATGCTTGCGGCTA-GATCAA-CTGAAACTGGAAGATTGTGT 357
||||||| ||||||| ||| |||||| ||||| | |||| | ||||||||||||||||||
Sbjct 328 TGAATCCGAATTCAAGGATCTGCTTGAGGCTATG-TCAATC-GAAACTGGAAGATTGTGT 385
Query 358 TTGTTTGGATATTGCTCCAATGATTGCGTATCAAGCTACAATTATGGTCAAAAGGTAATG 417
| ||||||||||| || | |||||| |||||||||||||||||||| ||||||||||
Sbjct 386 CTATTTGGATATTGTTCTGAGGATTGCATATCAAGCTACAATTATGGTGGAAAGGTAATG 445
Query 418 GAGAATTTGGAAGAAG 433
|||||||||||||||
Sbjct 446 AAGAATTTGGAAGAAG 461
> AT1G51480.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:19090847-19094306 REVERSE LENGTH=2826
Length=2826
Score = 1476 bits (799), Expect = 0.0
Identities = 981/1066 (92%), Gaps = 24/1066 (2%)
Strand=Plus/Plus
Query 436 GAGAAGAAGCATATCCAAACCACAATTGGTTTGGATACAATGGTTGGAAAT-GTATGGGA 494
||| ||||| ||||||| |||||| |||||||| || |||||||| ||||| | |||| |
Sbjct 700 GAGGAGAAGAATATCCATACCACAGTTGGTTTGTATGCAATGGTT-GAAATGGCATGGAA 758
Query 495 AAGCCTCATGAACGATGAAATAAGAACCTTGGGTCTTTATGGTATGGGGGGTGTAGGAAA 554
|||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||
Sbjct 759 AAGCCTCATGAATGATGAAATAAGAACCTTGTGTCTTCATGGTATGGGGGGAGTAGGAAA 818
Query 555 AACCACCCTCTTAGCTTGTATCAACAACAAATTTGTTGAGCTGGAGAGTGAATTTGATGT 614
|||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 819 AACCACACTCTTAGCTTGCATCAACAACAAATTCGTTGAACTGGAGAGTGAATTTGATGT 878
Query 615 TGTGATATGGGTTGTGGTATCAAAAGAGTTTCAG-TTCGAGGGCATTCAAGATCAGATTC 673
||||||||||||||||||||| ||||| |||||| || ||||| ||||||||||||||||
Sbjct 879 TGTGATATGGGTTGTGGTATCTAAAGACTTTCAGCTT-GAGGGTATTCAAGATCAGATTC 937
Query 674 TTGGAAGAATACGTCTTGACAAGGAATGGGAAAGAGAAACTGAAAATAAGAAAGCCTCTC 733
|||| ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 938 TTGGTAGATTACGTCTCGACAAGGAATGGGAAAGAGAAACAGAAAATAAGAAAGCCTCAC 997
Query 734 TCATAAACAATAACCTTAAGAGAAAGAAATTTGTGCTGTTGTTGGATGATATATGGAGCA 793
||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||
Sbjct 998 TCATAAACAATAACCTTAAGAGAAAAAAATTTGTGCTGTTGTTGGATGATCTCTGGAGCG 1057
Query 794 AGGTAGATCTGTACAAGATAGGAGTTCCAGCTCCAACTCGAGAAAATGGATCGAAGATAG 853
||||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||
Sbjct 1058 AGGTAGATCTGAACAAGATAGGAGTTCCACCTCCAACTCGTGAAAATGGAGCGAAGATAG 1117
Query 854 TTTTCACCAGACGTTCAAAGGAAGTTTGCAAGTACATGAAAGCTGACGA-GCAGATAAAA 912
||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| ||||||
Sbjct 1118 TTTTCACCAAACGTTCAAAGGAAGTTTCCAAGTACATGAAAGCTGAC-ATGCAAATAAAA 1176
Query 913 GTTGATTGTTTGTCACCAGTTGAAGCGTGGGAATTGTTTCGAATTACTATTGGA-GATAT 971
||| |||||||||||||| |||||||||||||||||||||||||||| || || ||| |
Sbjct 1177 GTTTCTTGTTTGTCACCAGATGAAGCGTGGGAATTGTTTCGAATTACTGTT-GATGATGT 1235
Query 972 CATATTAAGCAGCCATCAGGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATGTCA 1031
|||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1236 CATATTAAGCAGCCATGAAGATATTCCTGCACTCGCAAGAATAGTTGCTGCAAAATGTCA 1295
Query 1032 TGGCTTGCCACTTGCACTCAATGTCATTGGGGAAACCATGGCATGTAAAGATACTATACA 1091
|||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||
Sbjct 1296 TGGCTTGCCACTTGCACTCATTGTCATTGGGGAAGCCATGGCATGTAAAGAGACTATACA 1355
Query 1092 AGAATGGCGTCATGCGATTAATGTTCTGAATTCACCTG--G-CCACAAATTTCCAG--A- 1145
|||||||| |||||||||||||||||||||||| |||| | |||||| ||||||| |
Sbjct 1356 AGAATGGCATCATGCGATTAATGTTCTGAATTCGCCTGCAGGCCACAAGTTTCCAGGTAT 1415
Query 1146 --AAGAA----TTCTTCGCGTTTTGAAGTTCAGTTATGATAGCTTGAAGAATGGTGAAAA 1199
||||| |||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1416 GGAAGAAAGAATTCTTCTCGTTTTGAAGTTCAGTTACGATAGCTTGAAGAATGGTGAAA- 1474
Query 1200 TCAA-TCGTGCTTCCTATATTGTTCTTTGTTTCCTGAGGATTTTGAAATAGAGAAGGAGA 1258
|||| | ||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1475 TCAAATTGTGTTTCCTATATTGTTCTTTGTTTCCTGAAGATTTTGAAATAGAGAAGGAGA 1534
Query 1259 AGTTGATAGAATACTGGATTTGCGAAGGATATATAAATACGAACAGATATGAAGATGGAG 1318
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1535 AGTTGATAGAATACTGGATTTGCGAAGGATATATAAATCCGAACAGATATGAAGATGGAG 1594
Query 1319 GTACCAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAAT 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1595 GTACCAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGAAT 1654
Query 1379 GTGAACTCACAGAC-AAAGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATA 1437
|||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1655 GTGAACTCACC-ACCAAAGTTAAAATGCATTATGTGATACGTGAGATGGCTCTTTGGATA 1713
Query 1438 AATTCTGACTTCGGAAATCAGCAAGAAACAATTTGTGTGAAATCTG 1483
||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 1714 AATTCTGACTTTGGAAAACAGCAAGAAACAATCTGTGTGAAATCTG 1759
Score = 872 bits (472), Expect = 0.0
Identities = 571/618 (92%), Gaps = 10/618 (2%)
Strand=Plus/Plus
Query 1508 TTTCAACCCTATTACTCCCGTATAACAAGTTGGTGAATATTTCAGTTGGATTCTTTCGGG 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1871 TTTCAACCCTATTACTCCCGTATAACAAGTTGGTGAATATTTCAGTTGGATTCTTTCTGT 1930
Query 1568 TTATGCCAAAACTTGTGGTCTTGGATCTTTCTACAAACATGAGTCTTATTGAATTGCCGG 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1931 TTATGCCAAAACTTGTGGTCTTGGATCTTTCTACAAACATGAGTCTTATTGAATTACCGG 1990
Query 1628 AAGAAATTTCTAACTTATGTTCCCTGCAATATCTCAATTTATCAAGCACAAGGATAAAAT 1687
| |||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||
Sbjct 1991 AGGAAATTTCTAACTTATGTTCTCTTCAATATCTTAATTTATCAAGCACAGGGATAAAAT 2050
Query 1688 CGCTACC----GGT-TG--GTAAGTTGAGGAAACTAATCTACTTGAATCTGGAGTTCAGT 1740
||||||| ||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct 2051 CGCTACCAGGTGGTATGAAG-AAGTTGAGGAAACTAATCTACTTGAATCTGGAGTTCAGT 2109
Query 1741 TATAAACTTGAGAGTCTTGTTGGGATCGCAGCAACCTTACCAAATCTGCAAGTGTTGAAA 1800
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2110 TATAAACTTGAGAGTCTTGTTGGCATATCAGCAACCTTACCAAATCTGCAAGTGTTGAAA 2169
Query 1801 TTATTTTATTCCCATGTTTGTGTTGATGACAGATTAATGGAGGAACTAGAGCACTTGGAG 1860
|||||||||||| |||||||||||||||||| |||||||||||||||| | ||| ||||
Sbjct 2170 TTATTTTATTCCAATGTTTGTGTTGATGACATATTAATGGAGGAACTACAACACATGGAT 2229
Query 1861 CA-TATGAAGATTTTAGCGGTAACTATAGAGGATGCCATGATTTTGGAAAGGATACAAGG 1919
|| | ||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2230 CACT-TGAAGATTTTAACGGTAACCATAGATGATGCCATGATTTTGGAAAGGATACAAGG 2288
Query 1920 AATGGACCGATTGGCGAGTAGTATTCGAAGTTTATGTCTAATAAATATGTCAACACCTCG 1979
|| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||
Sbjct 2289 TATTGACCGATTGGCGAGTAGTATTCGAGGTTTATGTCTAACAAATATGTCAGCACCTCG 2348
Query 1980 TGTAATATTAAGCACGACAGCTCTGGGAAGTCTTCAACAACTTGCAGTTAGGAGCTGCAA 2039
|||| ||||||| ||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct 2349 TGTAGTATTAAGTACGACAGCTCTGGGAGGTCTTCAACAACTTGCAATTCTGAGCTGCAA 2408
Query 2040 CATATCCGAGATAACGATAGATTGGGAAAGCAAAGAAAGAAGAGAGCTTTCACCAATGGA 2099
|||||| ||||||| ||| |||||| |||||||||||||||| ||| |||||||||||||
Sbjct 2409 CATATCTGAGATAAAGATGGATTGGAAAAGCAAAGAAAGAAGGGAGGTTTCACCAATGGA 2468
Query 2100 GATTCATCCATCTACAAG 2117
||||||||||||||||||
Sbjct 2469 GATTCATCCATCTACAAG 2486
Score = 483 bits (261), Expect = 4e-135
Identities = 341/380 (90%), Gaps = 4/380 (1%)
Strand=Plus/Plus
Query 56 GCAAAATGGCGGACTGGCTTCTACTAATACCCTGGAATAAAATCTTCACTGCTGCATGTG 115
||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 257 GCAAAATGGCGGATTGGCTTCTACTAATACCCTGGAACAAGATCTTCACTGCTGCATGTG 316
Query 116 GCTGCTTTTTAAGCGATAGAAACTACATTCACTTGATGGAGTCAAATCTCGATGCTCTGG 175
|||||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct 317 GCTGCTTTTTTAGCGATAGAAACTACATTCACAAGATGGAGGCAAATCTCGATGATCTGC 376
Query 176 AGACAACTATGGACGAACTTAAGAATAGACGAGATGATCTGTTAGGAAGAGTCGCCATAG 235
| ||||||||||| |||||||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct 377 ACACAACTATGGAAGAACTTAAGAATGGACGAGATGATTTGTTAAGAAGAGTTTCCATAG 436
Query 236 AAGAAGATAAAGGTTTGCAACGGCTTGCTCAAGTCAACGGATGGCTTTCAAGGGTAAAAA 295
||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||| |||
Sbjct 437 AAGAAGATAAAGGTTTGCAACAGCTTGCTCAAGTCAAAGGATGGATTTCAAGGGTAGAAA 496
Query 296 GTGTTGAATCCCA-ATTCAATGATATGCTTGCGGCTAGATCAACTGAAACTGGAAGATTG 354
|||||||| | | |||||| ||| |||||| || || ||||||||||||||||||||||
Sbjct 497 TTGTTGAAT-CTAGATTCAAGGATCTGCTTGAGGATAAATCAACTGAAACTGGAAGATTG 555
Query 355 TGTTTGTTTGGATATTGCTCCAATGA-TTGCGTATCAAGCTACAATTATGGTCAAAAGGT 413
||||||||||||| ||| || | || |||| |||||||||||||||||||| |||||||
Sbjct 556 TGTTTGTTTGGATTTTGTTCTGA-GAATTGCATATCAAGCTACAATTATGGTGAAAAGGT 614
Query 414 AATGGAGAATTTGGAAGAAG 433
|||| ||||| |||||||||
Sbjct 615 AATGAAGAATCTGGAAGAAG 634
> AT5G43740.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:17564738-17568802 FORWARD LENGTH=2866
Length=2866
Score = 1419 bits (768), Expect = 0.0
Identities = 972/1067 (91%), Gaps = 27/1067 (3%)
Strand=Plus/Plus
Query 435 GGAGAAGAAGCATATCCAAACCACAATTGGTTTGGATACAA-TGGTTGGAAAT-GTATGG 492
||||||||||| ||||||||||||| |||||||||||| || ||| ||||||| | | |
Sbjct 505 GGAGAAGAAGCTTATCCAAACCACAGTTGGTTTGGATA-AACTGG-TGGAAATGGCGT-G 561
Query 493 GA-AAGCCTCATGAACGATGAAATAAGAACCTTGGGTCTTTATGGTATGGGGGGTGTAGG 551
|| ||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||
Sbjct 562 GAGCAGCCTGATGAACGATGAAATAGGAACCTTGGGACTTTATGGTATGGGGGGAGTAGG 621
Query 552 AAAAACCACCCTCTTAGCTTGTATCAACAACAAATTTGTTGAGCTGGAGAGTGAATTTGA 611
||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||
Sbjct 622 AAAAACCACCCTCTTAGAAAGTCTCAACAACAAATTTGTTGAACTGGAGAGTGAATTTGA 681
Query 612 TGTTGTGATATGGGTTGTGGTATCAAAAGAGTTTCAGTTCGAGGGCATTCAAGATCAGAT 671
||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 682 TGTAGTGATATGGGTTGTGGTATCTAAAGACTTTCAGTTCGAGGGCATTCAAGATCAGAT 741
Query 672 TCTTGGAAGAATACG-TCTTGACAAGGAATGGGAAAGAGAAACTGAAAATAAGAAAGCCT 730
||| |||||| |||| || |||||||||||||||||||||||| |||| |||||||||||
Sbjct 742 TCTGGGAAGATTACGTTC-TGACAAGGAATGGGAAAGAGAAACAGAAAGTAAGAAAGCCT 800
Query 731 CTCTCATAAACAATAACCTTAAGAGAAAGAAATTTGTGCTGTTGTTGGATGATATATGGA 790
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||| | ||||
Sbjct 801 CTCTCATATACAATAACCTTGAGAGAAAGAAATTTGTGTTGTTGTTGGATGATCTCTGGA 860
Query 791 G-CAAGGTAGATCTGTAC-AAGATAGGAGTTCCAGCTCCAACTCGAGAAAATGGATCGAA 848
| || |||||| || || ||||||||||||||| |||||||||||||||||||||||||
Sbjct 861 GTGAA-GTAGATATG-ACTAAGATAGGAGTTCCACCTCCAACTCGAGAAAATGGATCGAA 918
Query 849 GATAGTTTTCACCAGACGTTCAAAGGAAGTTTGCAAGTACATGAAAGCTGACGAGCAGAT 908
||| |||||||||| ||||||| ||||||||||||| |||||||||||||| |||||||
Sbjct 919 GATTGTTTTCACCACTCGTTCAACGGAAGTTTGCAAGCACATGAAAGCTGACAAGCAGAT 978
Query 909 AAAAGTTGATTGTTTGTCACCAGTTGAAGCGTGGGAATTGTTTCGAATTACTATTGGAGA 968
|||||||| ||||||||| |||| |||||||||||||||||||||| ||||| |||||||
Sbjct 979 AAAAGTTGCTTGTTTGTCCCCAGATGAAGCGTGGGAATTGTTTCGACTTACTGTTGGAGA 1038
Query 969 TATCATATTAAGCAGCCATCAGGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATG 1028
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1039 TATCATATTAAGGAGCCATCAAGATATTCCCGCACTTGCAAGAATAGTTGCTGCAAAATG 1098
Query 1029 TCATGGCTTGCCACTTGCACTCAATGTCATTGGGGAAA-CCATGGCATGTAAAGATACTA 1087
|||||||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||
Sbjct 1099 CCATGGCTTGCCACTTGCACTCAATGTCATTGGC-AAAGCCATGTCATGTAAAGAAACTA 1157
Query 1088 TACAAGAATGG-CGTCATGCGATTAATGTTCTGAATTCACCTGGCCACAAATTTCCAG-- 1144
||||||||||| | |||||||||||||||||||||||| |||||||| | |||||||
Sbjct 1158 TACAAGAATGGTC-TCATGCGATTAATGTTCTGAATTCGGCTGGCCACGAGTTTCCAGGT 1216
Query 1145 A---AAGAA----TTCTTCGCGTTTTGAAGTTCAGTTATGATAGCTTGAAGAATGGTGAA 1197
| ||||| |||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1217 ATGGAAGAAAGAATTCTTCCCATTTTGAAGTTCAGTTATGATAGCTTGAAGAATGGTGAA 1276
Query 1198 AATCAA-TCGTGCTTCCTATATTGTTCTTTGTTTCCTGAGGATTTTGAAATAGAGAAGGA 1256
| |||| | ||||||||||||||||||| |||||||||| |||| ||||||| ||||||
Sbjct 1277 A-TCAAATTGTGCTTCCTATATTGTTCTCTGTTTCCTGAAGATTCTGAAATACCGAAGGA 1335
Query 1257 GAAGTTGATAGAATACTGGATTTGCGAAGGATATATAAATACGAACAGATATGAAGATGG 1316
||||| ||||||||||||||| |||||||||| ||||||| | |||||||||||||||||
Sbjct 1336 GAAGTGGATAGAATACTGGATATGCGAAGGATTTATAAATCCAAACAGATATGAAGATGG 1395
Query 1317 AGGTACCAACCAAGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGA 1376
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 AGGTACCAACCATGGTTATGATATAATTGGCTTGTTAGTTCGTGCACATTTGTTGATTGA 1455
Query 1377 ATGTGAACTCACAGACAAAGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGAT 1436
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 ATGTGAACTCACAGACAACGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGAT 1515
Query 1437 AAATTCTGACTTCGGAAATCAGCAAGAAACAATTTGTGTGAAATCTG 1483
|||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct 1516 AAATTCTGACTTCGGAAAACAACAAGAAACAATCTGTGTGAAATCTG 1562
Score = 699 bits (378), Expect = 0.0
Identities = 548/626 (88%), Gaps = 27/626 (4%)
Strand=Plus/Plus
Query 1508 TTTCAACCCTATTACTCC-CGTATAACA---AGTTGGTGAATATTTCAGTTGGATTCTTT 1563
|||||||||| ||| ||| | |||||| ||||||||| |||||| | ||||||||
Sbjct 1674 TTTCAACCCTTTTAATCCTAG-ATAACAGGTTGTTGGTGAAAATTTCAAATAGATTCTTT 1732
Query 1564 CGGGTTATGCCAAAACTTGTGGTCTTGGATCTTTCTACAAACAT-GAGTCTTATTGAATT 1622
||| |||||||||||||||||||||||||||||||| ||||| | || ||||||| ||||
Sbjct 1733 CGGTTTATGCCAAAACTTGTGGTCTTGGATCTTTCTGCAAACCTCGA-TCTTATTAAATT 1791
Query 1623 GCCGGAAGAAATTTCTAACTTATGTTCCCTGCAATATCTCAATTTATCAAGCACAAGGAT 1682
||||||||||||||||||| || |||||||||||||||||||| ||||| |||| ||||
Sbjct 1792 GCCGGAAGAAATTTCTAACCTAGGTTCCCTGCAATATCTCAATATATCACTCACAGGGAT 1851
Query 1683 AAAATCGCTACCGGTTGG--T----AAGTTGAGGAAACTAATCTACTTGAATCTGGAGTT 1736
|||||||||||| ||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1852 AAAATCGCTACCAGTTGGTCTGAAGAAGTTGAGGAAACTAATCTACTTGAATCTGGAGTT 1911
Query 1737 CAGTTATAAACTTGAGAGTCTTGTTGGGATCGCAGCAACCTTACCAAATCTGCAAGTGTT 1796
|| | | || || ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1912 CACTGGTGTACATGGGAGTCTTGTTGGGATAGCAGCAACCTTACCAAATCTGCAAGTGTT 1971
Query 1797 GAAATTATTTTATTCCCATGTTTGTGTTGATGACAGATTAATGGAGGAACTAGA-GCACT 1855
|||||| ||||||||| ||||| ||||||||||| ||||||| ||||| || | | |||
Sbjct 1972 GAAATTCTTTTATTCCTGTGTTTATGTTGATGACATATTAATGAAGGAATTACAAG-ACT 2030
Query 1856 TGGAGCA-TATGAAGATTTTAGCGGTAA-C-TATAGAGGATGCCATGATTTTGGAAAGGA 1912
||||||| | ||||||||||| | | || | || | |||||| || ||||||||||||||
Sbjct 2031 TGGAGCACT-TGAAGATTTTAACAGCAAACGTA-A-AGGATGTCACGATTTTGGAAAGGA 2087
Query 1913 TACAAGGA-ATGGACCGATTGGCGAGTAGTATTCGAAGTTTATGTCTAATAA-ATATGTC 1970
|||||||| ||| || |||||||||||||||||||||||||||||||| || |||||||
Sbjct 2088 TACAAGGAGATG-ACAGATTGGCGAGTAGTATTCGAAGTTTATGTCTAG-AAGATATGTC 2145
Query 1971 AACACCTCGTGTAATATTAAGCACGACAGCTCTGGGAAGTCTTCAACAACTTGCAGTTAG 2030
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||
Sbjct 2146 AACACCTCGTGTAATATTAAGCACGATAGCTCTGGGAGGTCTTCAACAACTTGCAATTCT 2205
Query 2031 GA-GCTGCAACATATCCGAGATAACGATAGATTGGGAAAGCAAAGAAAGAAGAGAGCTTT 2089
|| | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 2206 GATG-TGCAACATATCCGAGATAAGGATAGATTGGGAAAGCAAAGAAAGAAGGGAGCTTT 2264
Query 2090 CACCAATGGAGATTCATCCATCTACA 2115
|||||| |||||||| ||||||||||
Sbjct 2265 CACCAACGGAGATTCTTCCATCTACA 2290
Score = 468 bits (253), Expect = 1e-130
Identities = 346/389 (89%), Gaps = 13/389 (3%)
Strand=Plus/Plus
Query 50 GTTTGAGCAAAATGGC-GGACTGGCTTCTACTAATACCCTGGAATAAAATCTTCACTGCT 108
||||| ||||||| || || ||||| | | |||||||||||||| ||||||||||||||
Sbjct 63 GTTTGTGCAAAAT-GCTGGGCTGGC-T-T-GTAATACCCTGGAATCAAATCTTCACTGCT 118
Query 109 GCATGTGGCTGCTTTTTAAGCGATAGAAACTACATTCACTTGATGGAGTCAAATCTCGAT 168
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 119 GCATGTGGCTGCTTTCTAAGCGATAGAAACTACATTCACATGATGGAGTCAAATCTCGAT 178
Query 169 GCTCTGGAGACAACTATGGACGAACTTAAGAATAGACGAGATGATCTGTTAGGAAGAGTC 228
|||||| ||| ||||||||| |||||||||||| |||||||||| ||||||||||||||
Sbjct 179 GCTCTGCAGAAAACTATGGAAGAACTTAAGAATGGACGAGATGACCTGTTAGGAAGAGTT 238
Query 229 GCCATAGAAGAAGATAAAGGTTTGCAACGGCTTGCTCAAGTCAACGGATGGCTTTCAAGG 288
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 239 TCCATAGAAGAAGATAAAGGTTTGCAACGACTTGCTCAAGTCAATGGATGGCTTTCCAGG 298
Query 289 GTAAAAAGTGTTGAATCCCAATTCAATGATATGCTTGCGGCTA-GATCAA-CTGAAACTG 346
||| ||| |||||||||| ||||||| ||| |||||| ||||| | |||| | ||||| |
Sbjct 299 GTACAAATTGTTGAATCCGAATTCAAGGATCTGCTTGAGGCTATG-TCAATC-GAAACCG 356
Query 347 GAAGATTGTGTTTGTTTGGATATTGCTCCAATGATTGCGTATCAAGCTACAATTATGGTC 406
|||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||
Sbjct 357 GAAGATTGTGTTTGTTGGGATATTGCTCTGAGGATTGCATATCAAGCTACAATTATGGTG 416
Query 407 AAAAGGTAATGGA-GAAT-TTGGAAGAAG 433
|||||||| | || || | ||||||||||
Sbjct 417 AAAAGGTA-TCGAAGA-TGTTGGAAGAAG 443
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110441199000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5