BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493643
Length=1329
Score E
Sequences producing significant alignments: (Bits) Value
AT5G35940.1 | Symbols: | Mannose-binding lectin superfamily pr... 1125 0.0
AT5G35950.1 | Symbols: | Mannose-binding lectin superfamily pr... 883 0.0
AT1G52100.1 | Symbols: | Mannose-binding lectin superfamily pr... 427 1e-118
> AT5G35940.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr5:14090825-14092977 FORWARD LENGTH=1504
Length=1504
Score = 1125 bits (609), Expect = 0.0
Identities = 727/783 (93%), Gaps = 12/783 (2%)
Strand=Plus/Plus
Query 490 GGTCAAGTGGAATGCTATGAGTACGGGGACAAGAA-CGGAACAGAAGATAAGATTACGGT 548
|||||||||||||||||||||||||||||||| || ||||||| || |||||||||||||
Sbjct 577 GGTCAAGTGGAATGCTATGAGTACGGGGACAA-AACCGGAACACAATATAAGATTACGGT 635
Query 549 GAATTATCCATATGAATGTATCACATCTGTTGGTGGAAGCTACGCATTTA-CCAACCCTT 607
||||||||||||||||||||||||||| || | |||||||||||| || |||| ||||
Sbjct 636 GAATTATCCATATGAATGTATCACATCCGTAGAAGGAAGCTACGCAAATACCCAA-CCTT 694
Query 608 ATGGATGTATTGTCCTTAGGTCGTTAACTTTCAAAACATCAAATGGGAGAACCTTAGTAA 667
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 695 ATGGATGTATTGTCCTTAGGTCGTTAACATTCAAAACATCAAATGGGAGGACCTTAGTAA 754
Query 668 TTGGAACAGTGACTGGTACCAAGTTCTCGC-TGCAGAGCGAAGGAAATGCTATTGTTGGG 726
||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||
Sbjct 755 TTGGAACAGTGACTGGTACCAAGTTCTTGCTTG-AGAGCAAAGGAAATGCTATTGTTGGG 813
Query 727 TTCCATGGACGGGTAGGTTCTTGTGTTGATAGTATTGGGGCATATTACGCTCCGTTTTTT 786
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
Sbjct 814 TTCCATGGACGGGTAGGTTCTTGTGTTGATAGTATCGGTGCATATTACGCTCCGTTTTCT 873
Query 787 CCTTCTCCTCTACCTACAGAGAAACTAGAGGGACAAGGTGGTGACGGAGGAGACTCTTGG 846
|||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||
Sbjct 874 CCTTCTCCTCCACCTACACAGAAACTAGAGGGACAAGGTGGTGATGGAGGAGATTCTTGG 933
Query 847 GACGATGGTGCTTTCCTAAATGTGAAGAAGGTATACGTAGGACAAGGCTCGAACGGTATT 906
||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||
Sbjct 934 GACGATGGTGCTTTCCTAAATGTAAAGAAAGTATATATTGGACAAGGCTCGAACGGTATT 993
Query 907 GTCGCCGTTAAGTTTGAGTATGAGAACGATGCTAGTGAGGTGGTTTTTGGAGATGAACAT 966
|||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||
Sbjct 994 GTCGCCGTTAAGTTTGAGTACGAGAACGACGCTAGTGAGGTTGTTGTTGGAGATGAACAT 1053
Query 967 GGAAAGACGACATTGCTTGGATATGAAGAT-TTCAAGCTGGATTATCCGAGTGAATACAT 1025
|||||||| |||||||||||||| |||| | ||| ||||||||||||||| |||||||||
Sbjct 1054 GGAAAGACTACATTGCTTGGATACGAAG-TGTTCGAGCTGGATTATCCGAATGAATACAT 1112
Query 1026 CATTTCAGTGGAGGGTTGCCACGACA-GGATTATGGGAGCTGAAACTGGAGTTATAACGA 1084
|| ||| |||||||||||||||||| || | |||||||||||||||||||||||||| |
Sbjct 1113 CACATCATTGGAGGGTTGCCACGACAAGG-TCATGGGAGCTGAAACTGGAGTTATAACAA 1171
Query 1085 TGCTTAGGTTCAAGACAAACAATCGCACCTCTC-ATCCCTTTGGACTTGAAGCTGGTGTC 1143
|||||||||||||||||||||| || ||||||| | || |||||||||||||||||||||
Sbjct 1172 TGCTTAGGTTCAAGACAAACAAACGTACCTCTCCA-CCTTTTGGACTTGAAGCTGGTGTC 1230
Query 1144 AACTTCGTCCTCCAGAAGGAAGGTCACAAGATCACTGGGTTCCATGGAAAATCCAGTACT 1203
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1231 AACTTCGTCCTCCAGAAGGAAAGTCACAAGATCACTGGGTTCCATGGAAAGTCCAGTACT 1290
Query 1204 ATGCTTCATCAGATTGGGGTTCATGTCGTTCCCATCACTAAGTGACCATCCACAGCTACC 1263
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 1291 ATGCTTCATCAGATTGGGGTTCATGTCGTTCCCATCACTGAGTGACCATCCATAGCTACC 1350
Query 1264 TTT 1266
|||
Sbjct 1351 TTT 1353
Score = 651 bits (352), Expect = 0.0
Identities = 450/497 (91%), Gaps = 7/497 (1%)
Strand=Plus/Plus
Query 1 ATGGCCCTAATGGTGAAAGCTCAAGGTGGAAATGGAGGGAAGGAATGGGATGATGGATTC 60
||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||
Sbjct 1 ATGGCCCTAATGGTGAACGCTAAAGGTGGAAATGGAGGGAAAGAATGGGATGATGGGTTT 60
Query 61 AACTATGAGGGTGTAACAAAGATTCATGTACGAGCCGGTTATGATGGCATTCAGTTCATC 120
| |||||||||||||||||||| ||||| ||||| |||| ||| |||||||||||||||
Sbjct 61 GATTATGAGGGTGTAACAAAGATACATGTCCGAGCTGGTTCTGAAGGCATTCAGTTCATC 120
Query 121 AAGTTTGAATATGTCAAGGCTGGAAAAACTATTGTTGGACCAATCCATGGTGTCTCTGGT 180
|||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||
Sbjct 121 AAGTTTGACTATGTCAAGGTTGGAAAAACTATTGATGGACCAATCCATGGTGTTTCTGGC 180
Query 181 CTTGGTATGACACAAACGTTTGAGATTAACC---TGCAAAAGGAATATCTGGTATCTGTT 237
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 181 CTTGGTATGACACAAACGTTTGAGATTAACCATTTGCAAAAGGAATATCTGGTATCTATT 240
Query 238 GAGGGTTACTACGACAAATCTACGGGAGTGATCCAATCAATCCAATTCAAAACAAACGAG 297
||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||| |
Sbjct 241 GAGGGTTACTATGACAAATCTACGGGCGTGATTCAATCAATCCAATTCAAAACTAACGTG 300
Query 298 CAGACTTCTGATTTGATGGGGTTCAACAAGGGTACTAAGTTTTCACTAGGAACCACGAGG 357
||||||||||| ||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct 301 AAGACTTCTGATATGATGGGGTTCAACAAGGGTACTAAGTTTTCCCTAGGAATCATAAGG 360
Query 358 AGA-AAGATCATTGGGTTTCATGGATTTGCTGACAAGAAGGTCTACTCTCTTGGAGCATA 416
| | |||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct 361 A-ACAAGATCATTGGGTTTCATGGATTTTCTGACAAGAATGTCTATTCTCTTGGAGCATA 419
Query 417 TTTCATCA-GGATTCCTGCAACCAAATCGGCAATGCAAGGTGGTCAAACCACAGGCAAAG 475
|||||||| || ||| |||||||||||||| ||||||||||||||||| |||||| |||
Sbjct 420 TTTCATCAAGG-TTCTTGCAACCAAATCGGGAATGCAAGGTGGTCAAAACACAGGGAAAA 478
Query 476 GTTACGATGATGCTGGT 492
|||| ||| ||| ||||
Sbjct 479 GTTATGATTATGGTGGT 495
Score = 102 bits (55), Expect = 8e-21
Identities = 61/64 (95%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 1266 TTTGTGTTCCATTATGTATCTTTAACCTATTTTCACTTTTCAGATAATAAAAAGACAATT 1325
|||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1438 TTTGTGTTCCATTATGCATCGTTAACGTATTTTCACTTTTCAGATAATAAAAAGACAATT 1497
Query 1326 ATGT 1329
||||
Sbjct 1498 ATGT 1501
> AT5G35950.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr5:14104943-14106764 FORWARD LENGTH=1335
Length=1335
Score = 883 bits (478), Expect = 0.0
Identities = 675/769 (88%), Gaps = 18/769 (2%)
Strand=Plus/Plus
Query 489 TGGTCAAGTGGAATGCTATGAGTACGGGGACAAGAACGGAACAGAAGATAAGATTACGGT 548
|||||||||||||||||||||||| |||| ||||| ||||||| || || || |||| |
Sbjct 576 TGGTCAAGTGGAATGCTATGAGTATGGGGTCAAGATCGGAACACAAAATCAGTTTACCAT 635
Query 549 GAATTATCCATATGAATGTATCACATCTGTTGGTGGAAGCTACGCATTTA-CCAACCCTT 607
|||||||||||||||||||||||||| || || ||||||||||| || |||| ||||
Sbjct 636 CAATTATCCATATGAATGTATCACATCCGTAGGAGGAAGCTACGCGGATACCCAA-CCTT 694
Query 608 ATGGATGTATTGTCCTTAGGTCGTTAACTTTCAAAACATCAAATGGGAGAACCTTAGTAA 667
| ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||
Sbjct 695 ACAGATGTATTGTCCTTAGGTCGTTAACATTCAAAACATCAAATGGGAGAACGTCAGTAT 754
Query 668 TTGGAACAGTGACTGGTACCAAGTTCTCGC-TGCAGAGCGAAGGAAATGCTATTGTTGGG 726
|||||| || || ||||||| ||||| || || ||||| |||| |||||||||||||||
Sbjct 755 TTGGAAAAGAAACGGGTACCACGTTCTTGCTTG-AGAGCCAAGGCAATGCTATTGTTGGG 813
Query 727 TTCCATGGACGGGTAGGTTCTTGTGTTGATAGTATTGGGGCATATTACGCTCCGTTTTTT 786
||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| |||| |
Sbjct 814 TTCCATGGACGGGTAGGGTCTTGTGTTGATAGTATCGGGGAATATTATGCTCCATTTTCT 873
Query 787 CCTT-CTCCTCTACCTACAGAGAAACTAGAGGGACAAGGTGGTGACGGAGGAGACTCTTG 845
|||| | |||| ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct 874 CCTTAC-CCTCCCCCTACTGAGAAACTAGAGGGACAAGGTGGAGATGGAGGAGACTCTTG 932
Query 846 GGACGATGGTGCTTTCCTAAATGTGAAGAAGGTATACGTAGGACAAGGCTC-GAACGGTA 904
||||||||||||||||||||||||||||||||| | ||||||||||| | | ||||
Sbjct 933 GGACGATGGTGCTTTCCTAAATGTGAAGAAGGTTTGTATAGGACAAGGC-CAGTTTGGTA 991
Query 905 TTGTCGCCGTTAAGTTTGAGTATGAGAACGATGCTAGTGAGGTGGTTTTTGGAGATGAAC 964
||||| |||||||||||||||| |||||||| ||||||||||||||| | ||||||||||
Sbjct 992 TTGTCTCCGTTAAGTTTGAGTACGAGAACGACGCTAGTGAGGTGGTTGTGGGAGATGAAC 1051
Query 965 ATGGAAAGACGACATTGCTTGGATATGAAGATTTC-AAGCTGGATTATCCGAGTGAATAC 1023
|||||||| | ||||| |||||||||||||| ||| || |||||||||||||||||||||
Sbjct 1052 ATGGAAAGGCTACATTACTTGGATATGAAGAGTTCGAA-CTGGATTATCCGAGTGAATAC 1110
Query 1024 ATCATTTCAGTGGAGGGTTGCCACGACA-GGATTATGGGAGCTGAAACTGGAGTTAT-AA 1081
|| | || ||||||| |||||| || | || |||||||||||||||||||||| || ||
Sbjct 1111 ATAACATCGGTGGAGGCTTGCCAAGATAAGG-TTATGGGAGCTGAAACTGGAGT-ATTAA 1168
Query 1082 CGATGCTTAGGTTCAAGACAAACAATCGCACCTCTC-ATCCCTTTGGACTTGAAGCTGGT 1140
|||||||||||||||||||||||| ||||| ||||| |||| ||||||||| ||||||||
Sbjct 1169 CGATGCTTAGGTTCAAGACAAACATTCGCATCTCTCCATCC-TTTGGACTTAAAGCTGGT 1227
Query 1141 GTCAACTTCGTCCTCCAGAAGGAAGGTCACAAGATCACTGGGTTCCATGGAAAATCCAGT 1200
||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1228 TTCAACTTCGTCCTAGAGAAGGAAGGTCACAAGATCAATGGGTTCCATGGAAAATCTAGT 1287
Query 1201 A-CTATGCTTCATCAGATTGGGGTTCATGTCGTTCCCATCACTAAGTGA 1248
| | |||||||||||||||||| | |||||| ||||||||||| |||||
Sbjct 1288 AGC-ATGCTTCATCAGATTGGGATCCATGTCATTCCCATCACTGAGTGA 1335
Score = 579 bits (313), Expect = 3e-164
Identities = 440/500 (88%), Gaps = 13/500 (3%)
Strand=Plus/Plus
Query 1 ATGGCCCTAATGGTGAAAGCTCAAGGTGGAAATGGAGGGAAG-GAATGGGATGATGGATT 59
||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct 1 ATGGCACTAATGGTGAAAGCTGAAGGTGGAAATGGAGGGAAGCG-ATGGGATGATGGATT 59
Query 60 CAACTATGAGGGTGTAACAAAGAT-TCATGTACGAGCCGGT-TATGATGGCATTCAGTTC 117
| | |||||||||||||||||||| | ||||||||| ||| | ||| ||||||||||||
Sbjct 60 CGATTATGAGGGTGTAACAAAGATAT-ATGTACGAGGAGGTCT-TGAAGGCATTCAGTTC 117
Query 118 ATCAAGTTTGAATATGTCAAGGCTGGAAAAACTATTGTTGGACCAATCCATGGTGTCTCT 177
||||||||||| |||||||| | ||| ||||||||| ||||||||| ||||||||||||
Sbjct 118 ATCAAGTTTGACTATGTCAAAGATGGTAAAACTATTACTGGACCAATTCATGGTGTCTCT 177
Query 178 GGTCTTGGTATGACACAAACGTTTGAGATTAACC---TGCAAAAGGAATATCTGGTATCT 234
|||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 178 GGTCGTGGTTTGACACAAACGTTTGAGATTAACCATTTGCAAAAGGAATATCTGTTATCT 237
Query 235 GTTGAGGGTTACTACGACAAATCTACGGGAGTGATCCAATCAATCCAATTCAAAACAAAC 294
||||||||||||| |||| |||||| || ||||| |||||||||||||||||||| |||
Sbjct 238 ATTGAGGGTTACTATGACATATCTACCGGTGTGATTCAATCAATCCAATTCAAAACTAAC 297
Query 295 GAGCAGACTTCTGATTTGATGGGGTTCAACAAGGGTACTAAGTTTTCACTAGGAACCACG 354
|||| ||||||||| |||||||||||||| |||||||||||||||||||| || ||| |
Sbjct 298 CAGCAAACTTCTGATATGATGGGGTTCAACGAGGGTACTAAGTTTTCACTAAGATCCATG 357
Query 355 AGGAGAAAG-ATCATTGGGTTTCATGGATTTGCTGACAAGAAGGTCTACTCTCTTGGAGC 413
||| | || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 358 AGG-GGTAGAATCATTGGGTTTCATGGATTTGCTGACAAGAATCTCTACTCTCTTAGAGC 416
Query 414 ATATTTCATCAGGATTCCTGCAACCAAATCGGCAATGCAAGGTGGTCAAACCACAGGCAA 473
||||| ||| ||||| || ||||||||||| |||||| | |||||||||| |||||| ||
Sbjct 417 ATATTACATTAGGATCCCCGCAACCAAATCTGCAATGGATGGTGGTCAAAACACAGG-AA 475
Query 474 -AGGTTACGATGATGCTGGT 492
|||||| ||| ||| ||||
Sbjct 476 GAGGTTATGATCATGGTGGT 495
> AT1G52100.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr1:19383122-19385533 REVERSE LENGTH=1554
Length=1554
Score = 427 bits (231), Expect = 1e-118
Identities = 596/763 (78%), Gaps = 62/763 (8%)
Strand=Plus/Plus
Query 490 GGTCAAGTGGAATGCT-ATGAGTACGGGGAC-AAGAACGGAACAGAAGATAAGATTACGG 547
|||||||||||| || |||| ||||| | |||| ||||||| || || || ||||||
Sbjct 648 GGTCAAGTGGAA-ACTCGTGAGCGCGGGG-CGAAGACCGGAACACAACATGAGTTTACGG 705
Query 548 TGAATTATCCATATGAATGTATCACATCTGTTGG-TGGAAGCTACGCAT-TTA-CCAACC 604
| ||| |||||||||||| ||||||||||| ||| |||| |||||| | || |||| |
Sbjct 706 TCAATCATCCATATGAATATATCACATCTG-TGGAGGGAACCTACGC-TCATACCCAA-C 762
Query 605 CTTATGGA-TGTATTGTCCTTAGGTCGTTAACTTTCAAAACATCAAATGGGAGAACCT-T 662
|||| | ||| |||| |||| ||||||||||||||||||||||| || ||| ||| |
Sbjct 763 CTTA-CAATTGTGTTGTTCTTACATCGTTAACTTTCAAAACATCAAAAGGAAGAGCCTCT 821
Query 663 --AGTAATTGGAACAGTGACTGGTACCAAGTTCTCGCTGCAGAG-CGAAGGAAATGCTAT 719
|| ||||||| ||||||||||| ||| ||| |||| |||| | |||| |||||||
Sbjct 822 CCAGCGATTGGAAAAGTGACTGGTAGCAAATTCAAGCTGGAGAGAC-AAGGTGATGCTAT 880
Query 720 TGTTGGGTTCCATGGACGGGTAGGTTCTTGTGTTGATAGTATTGGGGCATATTACGCTCC 779
|||||||||||||||||||||||| |||||| ||||| |||| |||| |||||||||||
Sbjct 881 TGTTGGGTTCCATGGACGGGTAGGCTCTTGTATTGATGGTATCGGGGTGTATTACGCTCC 940
Query 780 GTTTTTTCCTTCTCCTC-TACCTACAGAGAAACTAGAGGGACAAGGTGGTGACGGAGGAG 838
|| |||||||||| | ||| |||||||||| | || |||||||||||||| ||||
Sbjct 941 ACTTCCACCTTCTCCTCCT-CCTCCAGAGAAACTCCAAGGCCAAGGTGGTGACGGTGGAG 999
Query 839 ACTCTTGGGACGATGGTGCTTTCCTAAATGTGAAGAAGGTATACGTAGGACAAGGC--TC 896
| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||| |
Sbjct 1000 ATTCTTGGGACGATGGTGCTTTCAAAAATGTGAAGAAGATATATGTAGGACAAGGCGAT- 1058
Query 897 GAACGGTATTG-TCGCCGTTAAGTTTGAGTATGAGAACG-ATGCTAGTGAGGTGGTTTTT 954
| || |||| | || || || |||||||| |||| | | ||||||||||| || |
Sbjct 1059 GTTGGG-ATTGCT-GCAGTCAAATTTGAGTACGAGA-CTTACACTAGTGAGGTGATTCT- 1114
Query 955 GG-AGAT-GAACATGGAAAG-ACGACATTGCTTGGATATGAAGATTTCAAGCTGGATTAT 1011
|| ||| || ||||||||| | |||||||| ||||| |||||| | | | |
Sbjct 1115 GGCAGAAAGA-CATGGAAAGGAA-ACATTGCTCGGATACGAAGATG--A-G-T--A---- 1162
Query 1012 CCGAGTGAATACATCATTTCAGTGGAGGGTTGCCACGACAGGATTA-TGGGAGCTGAAAC 1070
| | | |||| | | ||||| ||||| ||||| | | || | ||| |||||||
Sbjct 1163 C--A-T---TACAGC-T----GTGGAAGGTTGTCACGATAA-AGTAATTGGATCTGAAAC 1210
Query 1071 TGGAGTTATAACGATGCTTAGGTTCAAGACAAACAATCGCACCTCTC-ATCCCTTTGGAC 1129
|||||||||||| ||||||||||||||||| ||||| || | ||||| | || |||||||
Sbjct 1211 TGGAGTTATAACCATGCTTAGGTTCAAGACCAACAAACGTAACTCTCCA-CCATTTGGAC 1269
Query 1130 TTGAAGCTG-GTGTCAACTTCGTCCTCCAGAAGGAAGGTCACAAGATCACTGGGTTCCAT 1188
| ||| ||| || ||| ||| | || |||| || || ||||||||| |||||||||
Sbjct 1270 TCGAATCTGCGT-TCAGCTTTATACTTGAGAAAGATGGGCACAAGATCGTTGGGTTCCAC 1328
Query 1189 GGAAAATCCAGTAC-TATGCTTCATCAGATTGGGGTTCATGTC 1230
|||||| | ||||| | |||||||||||||||| || ||||||
Sbjct 1329 GGAAAAGCTAGTACCT-TGCTTCATCAGATTGGAGTCCATGTC 1370
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65411310135
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5