BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493675
Length=1354
Score E
Sequences producing significant alignments: (Bits) Value
AT5G36700.1 | Symbols: ATPGLP1, PGLP1 | 2-phosphoglycolate phos... 1829 0.0
AT5G36790.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1829 0.0
> AT5G36700.1 | Symbols: ATPGLP1, PGLP1 | 2-phosphoglycolate phosphatase
1 | chr5:14421635-14424490 REVERSE LENGTH=1443
Length=1443
Score = 1829 bits (990), Expect = 0.0
Identities = 1087/1135 (96%), Gaps = 1/1135 (0%)
Strand=Plus/Plus
Query 1 aaaaaataccaaaagaagcgaaaacagagaaaaagagagaaaaaaTGCTGAGTAGATCAG 60
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 18 AAAAAATACCAAAAGAAGCGGAAACAGAGAAAAAGAGAG-AAAAATGCTGAGTAGATCAG 76
Query 61 TTGCATCTGCTGTTTCACCGGtctcttcttcttctctcttacaaaactcaaaacctatct 120
|||| ||||||||| |||||||||| |||||||||||||||| ||||||||| |||||||
Sbjct 77 TTGCTTCTGCTGTTACACCGGTCTCATCTTCTTCTCTCTTACCAAACTCAAAGCCTATCT 136
Query 121 tctgtctcaaaaccctctcCGGTTATCGTTCTTCTTCTTTCTGCGGCGGCTCCATTCGTA 180
||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 137 TCTGTCTGAAAACCCTCTCCGGTTATCGTTCTTCTTCTTTCTGTGGCGGCTGTATTCGTA 196
Query 181 AAATCAACCATAAGCCTCTTCGAATGACTAGTTCTAATATGACTCCAAGAGCTATGGCCA 240
|||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct 197 AAATCAACCATAAGCCTCTTCGAATGACGAGTTCCAATATTACACCAAGAGCTATGGCCA 256
Query 241 CGCAACAGCTTGAAAACGCTGATCAGCTCATTGATTCTGTCGAGACTTTTATCTTCGATT 300
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 257 CACAACAGCTTGAGAACGCTGATCAGCTCATTGATTCTGTCGAAACTTTTATCTTCGATT 316
Query 301 GTGATGGTCAGATCTGGAAGGGAGATAAATTGATTGAGGGAGTTCCTGAAACTCTTGATA 360
|||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 317 GTGATGGTGTGATTTGGAAGGGAGATAAATTGATAGAGGGAGTTCCTGAAACTCTTGATA 376
Query 361 TGCTTCGTGCCAAGGGAAAGAGGTTGGTTTTTGTCACAAACAACTCAACAAAATCTAGGA 420
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 377 TGCTTCGTGCCAAGGGAAAGAGATTGGTTTTTGTGACAAACAACTCAACAAAATCTAGGA 436
Query 421 AACAGTATGGAAAAAAGTTTGAGACTCTTGGTCTGAATGTTAACGAGGAGGAGATATTTG 480
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 437 AACAGTATGGAAAAAAGTTCGAGACTCTTGGCCTGAATGTTAACGAGGAGGAGATATTTG 496
Query 481 CTTCATCTTTTGCTGCAGCTGCATACTTGCAGTCTATTAATTTCCCAAAAGATAAGAAGG 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 CTTCATCTTTTGCTGCTGCTGCATACTTGCAGTCTATTAATTTCCCAAAAGATAAGAAGG 556
Query 541 TATACGTGATTGGTGAGGAAGGTATCTTGAAAGAGCTCGAGCTTGCTGGTTTTCAATACC 600
| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 557 TCTATGTGATTGGTGAGGAAGGTATCTTGAAAGAGCTAGAGCTTGCTGGTTTTCAATACC 616
Query 601 TTGGAGGTCCGGATGATGGTAAAAGACAGATTGAATTGAAGCCAGGATTTCTAATGGAGC 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 617 TTGGAGGTCCGGATGATGGTAAAAGACAGATTGAATTGAAGCCAGGTTTTCTAATGGAGC 676
Query 661 ATGAACATGATGTGGGAGCTGTTGTGGTTGGATTTGATCGCTATTTCAACTACTACAAAA 720
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 ATGATCATGATGTTGGAGCTGTTGTGGTTGGATTTGATCGCTATTTCAACTACTACAAAA 736
Query 721 TTCAGTATGGAACACTATGTATCCGCGAAAACCCGGGGTGTCTTTTCATTGCTACAAACC 780
|||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 737 TTCAGTATGGAACACTCTGTATCCGTGAAAACCCGGGGTGTCTTTTCATCGCTACAAACC 796
Query 781 GAGATGCAGTCACTCACCTTACCGATGCTCAAGAATGGGCAGGTGGTGGCTCTATGGTTG 840
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 797 GAGATGCTGTCACTCACCTTACTGATGCTCAAGAATGGGCAGGTGGTGGCTCTATGGTTG 856
Query 841 GTGCTCTTGTTGGATCCACTCAACGTGAGCCTCTTGTTGTTGGAAAACCCTCAACTTTTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 GTGCTCTTGTTGGATCCACTCAACGTGAGCCTCTTGTTGTTGGAAAACCCTCAACTTTTA 916
Query 901 TGATGGACTATTTAGCAGACAAATTTGGAATCCAAAAGTCACAGATATGCATGGTGGGTG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 917 TGATGGACTATTTAGCAGACAAATTTGGAATCCAAAAGTCACAGATATGCATGGTTGGTG 976
Query 961 ATAGATTGGACACTGATATTTTATTCGGGCAGAATGGCGGATGTAAAACTCTGCTCGTCC 1020
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 977 ATAGATTGGACACTGACATTTTATTCGGGCAGAATGGCGGTTGTAAGACTCTACTCGTCC 1036
Query 1021 TCTCGGGTGTCACTTCAATCTCAATGTTGGAAAGCCCTGAGAACAAGATACAACCAGATT 1080
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTCGGGTGTTACTTCAATCTCTATGTTGGAAAGCCCTGAGAACAAGATACAACCAGATT 1096
Query 1081 TCTACACCAGCAAAATCTCCGATTTTCTGTCCCCGAAAGCAGCAACTGTATAATC 1135
||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1097 TCTACACCAGCAAGATCTCCGATTTTCTGTCTCCGAAAGCCGCAACTGTATAATC 1151
> AT5G36790.1 | Symbols: | Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein | chr5:14480935-14483790 REVERSE
LENGTH=1443
Length=1443
Score = 1829 bits (990), Expect = 0.0
Identities = 1087/1135 (96%), Gaps = 1/1135 (0%)
Strand=Plus/Plus
Query 1 aaaaaataccaaaagaagcgaaaacagagaaaaagagagaaaaaaTGCTGAGTAGATCAG 60
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 18 AAAAAATACCAAAAGAAGCGGAAACAGAGAAAAAGAGAG-AAAAATGCTGAGTAGATCAG 76
Query 61 TTGCATCTGCTGTTTCACCGGtctcttcttcttctctcttacaaaactcaaaacctatct 120
|||| ||||||||| |||||||||| |||||||||||||||| ||||||||| |||||||
Sbjct 77 TTGCTTCTGCTGTTACACCGGTCTCATCTTCTTCTCTCTTACCAAACTCAAAGCCTATCT 136
Query 121 tctgtctcaaaaccctctcCGGTTATCGTTCTTCTTCTTTCTGCGGCGGCTCCATTCGTA 180
||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 137 TCTGTCTGAAAACCCTCTCCGGTTATCGTTCTTCTTCTTTCTGTGGCGGCTGTATTCGTA 196
Query 181 AAATCAACCATAAGCCTCTTCGAATGACTAGTTCTAATATGACTCCAAGAGCTATGGCCA 240
|||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct 197 AAATCAACCATAAGCCTCTTCGAATGACGAGTTCCAATATTACACCAAGAGCTATGGCCA 256
Query 241 CGCAACAGCTTGAAAACGCTGATCAGCTCATTGATTCTGTCGAGACTTTTATCTTCGATT 300
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 257 CACAACAGCTTGAGAACGCTGATCAGCTCATTGATTCTGTCGAAACTTTTATCTTCGATT 316
Query 301 GTGATGGTCAGATCTGGAAGGGAGATAAATTGATTGAGGGAGTTCCTGAAACTCTTGATA 360
|||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 317 GTGATGGTGTGATTTGGAAGGGAGATAAATTGATAGAGGGAGTTCCTGAAACTCTTGATA 376
Query 361 TGCTTCGTGCCAAGGGAAAGAGGTTGGTTTTTGTCACAAACAACTCAACAAAATCTAGGA 420
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 377 TGCTTCGTGCCAAGGGAAAGAGATTGGTTTTTGTGACAAACAACTCAACAAAATCTAGGA 436
Query 421 AACAGTATGGAAAAAAGTTTGAGACTCTTGGTCTGAATGTTAACGAGGAGGAGATATTTG 480
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 437 AACAGTATGGAAAAAAGTTCGAGACTCTTGGCCTGAATGTTAACGAGGAGGAGATATTTG 496
Query 481 CTTCATCTTTTGCTGCAGCTGCATACTTGCAGTCTATTAATTTCCCAAAAGATAAGAAGG 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 CTTCATCTTTTGCTGCTGCTGCATACTTGCAGTCTATTAATTTCCCAAAAGATAAGAAGG 556
Query 541 TATACGTGATTGGTGAGGAAGGTATCTTGAAAGAGCTCGAGCTTGCTGGTTTTCAATACC 600
| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 557 TCTATGTGATTGGTGAGGAAGGTATCTTGAAAGAGCTAGAGCTTGCTGGTTTTCAATACC 616
Query 601 TTGGAGGTCCGGATGATGGTAAAAGACAGATTGAATTGAAGCCAGGATTTCTAATGGAGC 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 617 TTGGAGGTCCGGATGATGGTAAAAGACAGATTGAATTGAAGCCAGGTTTTCTAATGGAGC 676
Query 661 ATGAACATGATGTGGGAGCTGTTGTGGTTGGATTTGATCGCTATTTCAACTACTACAAAA 720
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 ATGATCATGATGTTGGAGCTGTTGTGGTTGGATTTGATCGCTATTTCAACTACTACAAAA 736
Query 721 TTCAGTATGGAACACTATGTATCCGCGAAAACCCGGGGTGTCTTTTCATTGCTACAAACC 780
|||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 737 TTCAGTATGGAACACTCTGTATCCGTGAAAACCCGGGGTGTCTTTTCATCGCTACAAACC 796
Query 781 GAGATGCAGTCACTCACCTTACCGATGCTCAAGAATGGGCAGGTGGTGGCTCTATGGTTG 840
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 797 GAGATGCTGTCACTCACCTTACTGATGCTCAAGAATGGGCAGGTGGTGGCTCTATGGTTG 856
Query 841 GTGCTCTTGTTGGATCCACTCAACGTGAGCCTCTTGTTGTTGGAAAACCCTCAACTTTTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 GTGCTCTTGTTGGATCCACTCAACGTGAGCCTCTTGTTGTTGGAAAACCCTCAACTTTTA 916
Query 901 TGATGGACTATTTAGCAGACAAATTTGGAATCCAAAAGTCACAGATATGCATGGTGGGTG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 917 TGATGGACTATTTAGCAGACAAATTTGGAATCCAAAAGTCACAGATATGCATGGTTGGTG 976
Query 961 ATAGATTGGACACTGATATTTTATTCGGGCAGAATGGCGGATGTAAAACTCTGCTCGTCC 1020
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 977 ATAGATTGGACACTGACATTTTATTCGGGCAGAATGGCGGTTGTAAGACTCTACTCGTCC 1036
Query 1021 TCTCGGGTGTCACTTCAATCTCAATGTTGGAAAGCCCTGAGAACAAGATACAACCAGATT 1080
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTCGGGTGTTACTTCAATCTCTATGTTGGAAAGCCCTGAGAACAAGATACAACCAGATT 1096
Query 1081 TCTACACCAGCAAAATCTCCGATTTTCTGTCCCCGAAAGCAGCAACTGTATAATC 1135
||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1097 TCTACACCAGCAAGATCTCCGATTTTCTGTCTCCGAAAGCCGCAACTGTATAATC 1151
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66666323760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5