BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493716 Length=1545 Score E Sequences producing significant alignments: (Bits) Value AT5G37380.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 1127 0.0 > AT5G37380.1 | Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:14816759-14819287 REVERSE LENGTH=1862 Length=1862 Score = 1127 bits (610), Expect = 0.0 Identities = 822/917 (90%), Gaps = 44/917 (5%) Strand=Plus/Plus Query 644 CCCAGAGGAACAATCAGCCAGCCCAGAAGAACAATCCGCCGGCCCAGAAGAACAATCCGC 703 |||||| || ||||| ||| |||||||||| ||||||||| ||||||||||||||||| | Sbjct 823 CCCAGAAGACCAATCCGCCTGCCCAGAAGACCAATCCGCCAGCCCAGAAGAACAATCCTC 882 Query 704 CGACCCAGAAGAACAATCCACAAAAGCCAGTTGGTAATACACAGAAAACAGGACAG-ACG 762 ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| | || Sbjct 883 CGACCCAAAAGAACAATCCGCAAAAGCCAGTTGGTACTACACAGAAAACAGGAC-GTACT 941 Query 763 GA-ACATCACACAACAACACCAAGTTCATTTGCTGCATCTGCATCATCAGACCAATCAAA 821 || | |||||||||||||||||| |||||| ||||||||| ||||||||||||||||| Sbjct 942 GATA-ATCACACAACAACACCAAACTCATTTACTGCATCTGGGTCATCAGACCAATCAAA 1000 Query 822 GTCGAATACTTTCTGGACAGTCTGCAGGAGATGCATGATGCAGTACGAGTATCTAAGATT 881 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1001 GTCGAATACTTTCTGGACAGTCTGCAGGAGATGCATGATGCAGTACGAGTATCTAAGAGT 1060 Query 882 TTATGTCAACTGTAACCTTCGGTGTCCTAATTGTCTACAGTCGTATTTGGCAGTAGAAGT 941 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1061 TTATGTCAACTGTAACCTTCGGTGTCCTAATTGTCTACAGTCCTATTTGGCAGTAGAAGT 1120 Query 942 CCCTAAACCAGGTATATCAAGCCGTTGGAGTAGTTTCAGCCGTCTAAAGCGAAACCTGGA 1001 ||||||||||||||| ||||||||||||||||||| |||||| | || | Sbjct 1121 CCCTAAACCAGGTATTTCAAGCCGTTGGAGTAGTTGCAGCCG--T----------CT--A 1166 Query 1002 TCCGAAGTCAGCTGCGAACCACAACACTACTTCAGGTTTATTTAATAACTCCAAGTGGAC 1061 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1167 ----AAGTCAGCTGCAAACCACAATACTACTTCAGGTTTATTTAATAACTCCAAGTGGAC 1222 Query 1062 ATTCTCAAGAACCAGCAGTGCAGCTCATGCTGCTAGTGTGGTTCAACAGGCTTATGAGAA 1121 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 1223 ATTCTCAAGAACCAGCAGTGCAGCTCATGCTGCAAGTGTGGTTCAACATGCTTATGAGAA 1282 Query 1122 GGTCAAGAAAGAACGCGAGCAGGCGAAAGCAACCGCGAGAAGAGAAAAGAAGAACGCCAA 1181 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1283 GGTAAAGAAAGATCGCGAGCAGGCGAAAGCAACCGCGAGAAGAGAAAAGAAGAATGCCAA 1342 Query 1182 AAGGAAGAGCACAACTGATTCGTCTGCTTCTGGTAGTTCGCTTaaaaaaaGGAAAGTTCG 1241 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 1343 AAGAAAGAGCACAACTGATTCGTCTGCTTCTGGTAGTTCGCTTAAAAAGAGGAAAGTTTG 1402 Query 1242 TGGAGAAAATGATGTTGGTTGCTCTGGTGGAAGAAAGGTCACTTACTGTGTGACTGGTGA 1301 | ||||| |||| | ||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct 1403 TTTAGAAACTGATATCGGTTGCTCTAGTGGAAGAGAGGTCACTTACCGTGTGACTGGTGA 1462 Query 1302 AACCGGAAAAAACATGAGAAAGTTAGAACATGAAACCAAAGAGAGAT-CGGACAAGTTCT 1360 || ||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | Sbjct 1463 AAACGGAAAAAACATGGGAAAGTTAGAACATGGAACCAAAGAGAG-TGCGGACAAGTTGT 1521 Query 1361 CTCCTAGAAGAACCCAGAGAAATATTAGCAAGGAGGATGT-A-AAG-----T-----CGC 1408 ||| |||||||||||||||||| |||||||||||| |||| | ||| | ||| Sbjct 1522 CTCTTAGAAGAACCCAGAGAAAGATTAGCAAGGAGAATGTTACAAGAGAGGTAAAGTCGC 1581 Query 1409 GTTAGCATTCTGACTTGGTTGAGTGAGGTTTGAGTTATGCAGGCATAATTGTGATTGATG 1468 |||||||||||||| |||||||||||||| |||||||||||||||||| | ||||||| Sbjct 1582 GTTAGCATTCTGACCCCGTTGAGTGAGGTTTAAGTTATGCAGGCATAATT-T-ATTGATG 1639 Query 1469 GATTCTCCAGGCTATAACCAGTCACTAGGATATATTTTGTAAGTTGGGTCATTCGGTAAT 1528 |||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||| Sbjct 1640 GATTCTCCAGGCTATAACCAGTCA-TA---TAT-TTT-GTAAGTTGGGTCATTCGGTAAT 1693 Query 1529 ATTTGGGTTCTAACATT 1545 ||| |||||||||||| Sbjct 1694 CTTTTGGTTCTAACATT 1710 Score = 913 bits (494), Expect = 0.0 Identities = 545/570 (96%), Gaps = 2/570 (0%) Strand=Plus/Plus Query 154 ATGGAGTGCAACAAAGACGAGGCGGCAAGGGCGAAAGAAATTGCAGAGAACAAGTTCAAA 213 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 291 ATGGAGTGCAACAAAGACGAGGCGACGAGGGCGAAAGAAATTGCAGAGAACAAGTTCAAA 350 Query 214 ATGAAAGACATTGCTGGGGCCAAGAAATTTGCCTTGAAAGCTCAAAATCTGTATCCAGAG 273 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 351 ATGAAAGACATTGCCGGGGCTAAGAAATTTGCCTTGAAAGCTCAAAATCTGTATCCAGAG 410 Query 274 ATAGAAGGTGTTTCTCAGATGTTAGCAACCTTGGATGTGTATATTGCTGCAGAAAACAAA 333 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 411 ATAGAAGGTGTTTCTCAGATGTTAGCAACCTTGGATGTGTATATCGCTGCAGAAAACAAA 470 Query 334 GTAAACGAGGATGTAGACTGGTATGGAATACTCAATGCAAGTCCGCGCGATGATGATGAA 393 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct 471 GTAAACGAGGATGTCGACTGGTATGGAATACTCAATGCAAGTCCTCGGGATGATGATGAA 530 Query 394 ACGTTGAAGAGAAAGTACAGGAAGCTTGCTCTAATGCTCCACCCGGATAAAAACAAGTCT 453 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 531 ACGTTGAAGAGAAAGTACAGGAAGCTTGCTCTAATGCTTCACCCCGATAAAAACAAGTCT 590 Query 454 ATAGGAGCTGAAGGAGCATTCAAACATGTTTCTGAAGCTTGGAAATTCTTGTCAGATAAG 513 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 591 ATAGGAGCTGAAGGGGCATTCAAACATGTTTCTGAAGCTTGGAAATTCTTGTCAGATAAG 650 Query 514 GAAAAGAGAGCAGCTTATGATCGTAGGAAAAGTTTGCACTCAGTTTATCAGAAGGTCACA 573 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 651 GAAAAGAGAGCAGCTTATGATCGTAGGAAAAGTTTGCACTCAGTTTATCAGAAGGTCTCA 710 Query 574 GTTTCGTCTTCTAATAACGGTTTCTGCAATTTCGCCAAGACTACTTTCACTACAAATGCG 633 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 711 GTTTCATCTTCTAATAACGGGTTCTGCAATTTCGCCAAGACTACTTTCACTACAAATGCA 770 Query 634 AGGACGACGACCCAGAGGAACAATCAGCCAGCCCAGAAGAACAATCCGCCGGCCCAGAAG 693 ||||||||||||| ||| ||||||| ||| |||||||||| ||||||||| ||||||||| Sbjct 771 AGGACGACGACCCCGAGAAACAATCCGCCGGCCCAGAAGACCAATCCGCCAGCCCAGAAG 830 Query 694 AACAATCCGCC-GACCCAGAAGAACAATCC 722 | ||||||||| | ||||||||| |||||| Sbjct 831 ACCAATCCGCCTG-CCCAGAAGACCAATCC 859 Score = 230 bits (124), Expect = 4e-59 Identities = 135/140 (96%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 10 GAAACGCAACTGGTGTGAGTGATTCTAGCGTTTTCTCTCGTCGCATCTTCT-TTCTTCAT 68 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 1 GAAACGCAACTGGTGTGAGTGATTCTAGCGTTTTCTCTCGTCGCATCTTCTCTT-TTCAT 59 Query 69 CTTTGACCCTAAAACTCTGCAAATCTCGAGTTTTCAGGTTTAATCGATTTTGATGTTGTT 128 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 60 CTTTGACCCTAAAACTTTGCAAATCTCGAGCTTTCAGGTTTAATCGATTTTGATGTTGTT 119 Query 129 GCTAATCCCGTAGGAATCAG 148 ||||||||||||| |||||| Sbjct 120 GCTAATCCCGTAGAAATCAG 139 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76254627855 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5