BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493768 Length=348 Score E Sequences producing significant alignments: (Bits) Value AT4G06495.1 | Symbols: | transposable element gene | chr4:3133... 169 2e-41 AT2G01029.1 | Symbols: | transposable element gene | chr2:2846... 158 4e-38 AT2G21460.1 | Symbols: | transposable element gene | chr2:9188... 156 2e-37 AT4G06496.1 | Symbols: | transposable element gene | chr4:3136... 154 5e-37 AT3G30816.1 | Symbols: | transposable element gene | chr3:1251... 152 2e-36 AT2G12540.1 | Symbols: | transposable element gene | chr2:5108... 150 7e-36 AT2G06860.1 | Symbols: | transposable element gene | chr2:2766... 150 7e-36 AT1G41797.1 | Symbols: | transposable element gene | chr1:1556... 150 7e-36 AT4G04655.1 | Symbols: | transposable element gene | chr4:2357... 147 9e-35 AT4G08760.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 141 4e-33 AT4G00140.1 | Symbols: EDA34 | Calcium-binding EF-hand family p... 139 2e-32 AT4G05300.1 | Symbols: | transposable element gene | chr4:2705... 139 2e-32 AT5G29060.2 | Symbols: | transposable element gene | chr5:1112... 134 7e-31 AT2G12385.1 | Symbols: | transposable element gene | chr2:4991... 130 9e-30 AT2G12530.1 | Symbols: | transposable element gene | chr2:5106... 117 7e-26 AT3G47240.1 | Symbols: | transposable element gene | chr3:1739... 102 2e-21 > AT4G06495.1 | Symbols: | transposable element gene | chr4:3133802-3135016 FORWARD LENGTH=1215 Length=1215 Score = 169 bits (91), Expect = 2e-41 Identities = 161/192 (84%), Gaps = 15/192 (8%) Strand=Plus/Plus Query 39 ggatagaccgatcgtcggacggatcggatcggacagaccgatcgtcggacggatca-gac 97 ||| ||||||||||||||||||||||||| |||||| |||||||||||||||| || | | Sbjct 694 GGACAGACCGATCGTCGGACGGATCGGATGGGACAGGCCGATCGTCGGACGGAACAGGTC 753 Query 98 agaccgatcgtcgga-cggatcAGATAGACCGATCGCGTATAAGGGAAAAGTGTTCGAAG 156 ||| || | | || | | |||| || ||| | | || | ||||||||||||| | Sbjct 754 GGACAGA-C--C-GATC-G-TCAG--AG-GGGAT-G-G-AT-CGAGAAAAGTGTTCGAGG 800 Query 157 AAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATGCAATCTCACC 216 |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||| ||| Sbjct 801 AAGCACAAGGATAAGTGCATCCGAACAAACCCAAGGGTCGCCCATGGATGCAATCTTACC 860 Query 217 GGTAAAGGGAGA 228 |||||||||||| Sbjct 861 GGTAAAGGGAGA 872 > AT2G01029.1 | Symbols: | transposable element gene | chr2:28465-38652 FORWARD LENGTH=10188 Length=10188 Score = 158 bits (85), Expect = 4e-38 Identities = 170/207 (82%), Gaps = 22/207 (11%) Strand=Plus/Plus Query 43 agaccgatc-g-tcggacggatcggatcggacagaccgatcgtcggacggatc--a---g 95 |||| |||| | |||| | || |||||||||||||||||||||||||||| || | | Sbjct 3787 AGACGGATCGGATCGGCCAGA-CGGATCGGACAGACCGATCGTCGGACGGGTCAGATGGG 3845 Query 96 acagaccgatcg--t--cgg-acggatcAGATAGACCGATCG-CGTAT-A-A--G---G- 141 |||| ||||||| | ||| |||| || || ||||| |||| || || | | | | Sbjct 3846 ACAGGCCGATCGTCTGACGGAACGGGTCGGACAGACCAATCGTCGGATGAGATGGATCGA 3905 Query 142 GAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCAT 201 ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 3906 GAAAAGTGTTCGAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCAT 3965 Query 202 GGATGCAATCTCACCGGTAAAGGGAGA 228 ||||||||||| |||| |||||||||| Sbjct 3966 GGATGCAATCTTACCGATAAAGGGAGA 3992 Score = 152 bits (82), Expect = 2e-36 Identities = 170/208 (82%), Gaps = 24/208 (12%) Strand=Plus/Plus Query 43 agaccgatc-g-tcggacggatcggatcggacagaccgatcgtcggacggatc--a---g 95 |||| |||| | |||| | || |||||||||||||||||||||||||||| || | | Sbjct 6721 AGACGGATCGGATCGGCCAGA-CGGATCGGACAGACCGATCGTCGGACGGGTCAGATGGG 6779 Query 96 acagaccgatcg--t--cgg-acggatcAGATAGACCGATCG-CGTAT-A-A--G---G- 141 |||| ||||||| | ||| |||| || || ||||| |||| || || | | | | Sbjct 6780 ACAGGCCGATCGTCTGACGGAACGGGTCGGACAGACCAATCGTCGGATGAGATGGATCGA 6839 Query 142 GAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCAT 201 ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 6840 GAAAAGTGTTCGAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCAT 6899 Query 202 GGATGCAATCTCACCG-GTAAAGGGAGA 228 ||||||||||| |||| | ||||||||| Sbjct 6900 GGATGCAATCTTACCGAG-AAAGGGAGA 6926 > AT2G21460.1 | Symbols: | transposable element gene | chr2:9188338-9194491 REVERSE LENGTH=6154 Length=6154 Score = 156 bits (84), Expect = 2e-37 Identities = 166/201 (83%), Gaps = 24/201 (12%) Strand=Plus/Plus Query 35 ggat-ggatagaccgatcgtcggacggatcggatcggac-agaccgatcg--t--cgg-a 87 |||| ||| |||||||||||||||||| |||||| |||| || ||||||| | ||| | Sbjct 1606 GGATGGGACAGACCGATCGTCGGACGGGTCGGATGGGACAAG-CCGATCGTCTGACGGAA 1664 Query 88 cggatcagacagaccgatcgtcggacggatcAGATAGACCGATCGCGTATAAGGGAAAAG 147 ||| ||||||||||| ||||||||| || ||| | ||| || | |||||| Sbjct 1665 CGGGTCAGACAGACCAATCGTCGGATGG----GAT-G---GAT--CG----A--GAAAAG 1708 Query 148 TGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATGC 207 ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1709 TGTTCGAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 1768 Query 208 AATCTCACCGGTAAAGGGAGA 228 ||||| |||| |||||||||| Sbjct 1769 AATCTTACCGATAAAGGGAGA 1789 > AT4G06496.1 | Symbols: | transposable element gene | chr4:3136680-3137837 FORWARD LENGTH=1158 Length=1158 Score = 154 bits (83), Expect = 5e-37 Identities = 177/219 (81%), Gaps = 20/219 (9%) Strand=Plus/Plus Query 30 ggattggat-ggatagaccgatcgtcggacggatcggatcggacagaccgatcgtcggac 88 |||| |||| || ||||| ||| |||||| ||||| ||||| ||||||| |||||||||| Sbjct 708 GGATCGGATCGGCTAGACTGATGGTCGGAAGGATCAGATCGCACAGACCAATCGTCGGAC 767 Query 89 ggatc--a--gac-agaccgatcgtc-g--g--acggatcAGATAGACCGATCG-C---- 133 |||| | | | || ||||||||| | | |||| || || |||||||||| | Sbjct 768 AGATCGGATGGGCTAGGCCGATCGTCAGACGAAACGGGTCGGACAGACCGATCGTCGGAG 827 Query 134 -GTAT--A-AGGGAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCA 189 | || | | |||||||||| || ||||||| |||||||||||| ||||||||||||| Sbjct 828 GGGATGGATCGAGAAAAGTGTTTGAGGAAGCACAAGGATAAGTGCATCCGAACACACCCA 887 Query 190 AGGGTCGCCCATGGATGCAATCTCACCGGTAAAGGGAGA 228 ||||||||||||||||||||||| ||||||||||||||| Sbjct 888 AGGGTCGCCCATGGATGCAATCTTACCGGTAAAGGGAGA 926 > AT3G30816.1 | Symbols: | transposable element gene | chr3:12511659-12513384 FORWARD LENGTH=1029 Length=1029 Score = 152 bits (82), Expect = 2e-36 Identities = 154/185 (83%), Gaps = 19/185 (10%) Strand=Plus/Plus Query 63 cggatcggacagaccgatcgtcggacggatc--a---gacagaccgatcg--t--cgg-a 112 |||||||||||||||||||||||||||| || | ||| | ||||||| | ||| | Sbjct 439 CGGATCGGACAGACCGATCGTCGGACGGGTCAGATGGGACTGGCCGATCGTCTGACGGAA 498 Query 113 cggatcAGATAGACCGATCG-CGTAT-A-A-GG-----GAAAAGTGTTCGAAGAAGCACG 163 ||| || || |||||||||| || || | | || ||||||||||||| ||||||| Sbjct 499 CGGGTCGGACAGACCGATCGTCGGATGAGATGGATCAAGAAAAGTGTTCGAGGAAGCACA 558 Query 164 AGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATGCAATCTCACCGGTAAAG 223 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 559 AGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGCAATCTTACCGATAAAG 618 Query 224 GGAGA 228 ||||| Sbjct 619 GGAGA 623 > AT2G12540.1 | Symbols: | transposable element gene | chr2:5108873-5110827 REVERSE LENGTH=1955 Length=1955 Score = 150 bits (81), Expect = 7e-36 Identities = 183/227 (81%), Gaps = 27/227 (12%) Strand=Plus/Minus Query 13 ggacggat-ggat--g--agtcggattggat-ggatagaccgatcgtcggacggatcgga 66 |||||||| |||| | || ||||| |||| |||||||||||||||||||||| ||||| Sbjct 1245 GGACGGATCGGATCAGCCAGACGGATCGGATCGGATAGACCGATCGTCGGACGGGTCGGA 1186 Query 67 tcggacagaccgatcg--t--c-ggacggatcagacagaccgatcgtcggacggatcAGA 121 | |||||| ||||||| | | | |||| || |||||| ||||||||||| || || Sbjct 1185 TGGGACAGTCCGATCGTCTAACAGAACGGGTCGGACAGAACGATCGTCGGATGG----GA 1130 Query 122 TAGACCGATCGCGTATAAGGGAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAA 181 | | ||| || | ||||||||||||| ||||||| | |||||||||| || || Sbjct 1129 T--A--GAT--CG----A--GAAAAGTGTTCGAGGAAGCACAAAGATAAGTGCATCCAAA 1082 Query 182 CACACCCAAGGGTCGCCCATGGATGCAATCTCACCGGTAAAGGGAGA 228 ||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 1081 CACACCCAAGGGTCGCCCATGGATGCAATCTTACCAGTAAAGGGAGA 1035 > AT2G06860.1 | Symbols: | transposable element gene | chr2:2766356-2772445 FORWARD LENGTH=2817 Length=2817 Score = 150 bits (81), Expect = 7e-36 Identities = 184/228 (81%), Gaps = 29/228 (13%) Strand=Plus/Plus Query 13 ggacggat-ggat--g--agtcggattgga-tggatagaccgatcgtcggacggatcgga 66 |||||||| |||| | || ||||||||| ||| | ||||||| ||||||||||||| Sbjct 2402 GGACGGATCGGATCGGCCAGACGGATTGGACCGGACAAACCGATCATCGGACGGATCGGG 2461 Query 67 tcggac-agaccgatcgt----cgg-acggatcagacagaccgatcgtcggacggatcAG 120 | |||| || |||||||| ||| |||| | |||||||| ||||||| | || | | Sbjct 2462 TGGGACAAG-CCGATCGTCAGACGGAACGGGTTAGACAGACTGATCGTC-G--GG-T--G 2514 Query 121 ATAGACCGATCGCGTATAAGGGAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGA 180 | ||| | | || ||||||||||||||| ||||||| |||||||||||| |||| Sbjct 2515 ---G---GAT-G-G-AT-CGGGAAAAGTGTTCGAGGAAGCACAAGGATAAGTGCATCCGA 2564 Query 181 ACACACCCAAGGGTCGCCCATGGATGCAATCTCACCGGTAAAGGGAGA 228 |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2565 ACACACCCAAGGGTCGCCCATGGATGCAATCTTACCGGTAAAGGGAGA 2612 > AT1G41797.1 | Symbols: | transposable element gene | chr1:15560039-15563509 REVERSE LENGTH=3471 Length=3471 Score = 150 bits (81), Expect = 7e-36 Identities = 166/202 (82%), Gaps = 26/202 (13%) Strand=Plus/Minus Query 35 ggat-ggatagaccgatcgtcggacggatcggatcggacagaccgatcg--t--cgga-c 88 |||| ||| |||||||||||||||||| |||||| |||||| ||||||| | |||| | Sbjct 687 GGATCGGACAGACCGATCGTCGGACGGGTCGGATGGGACAGGCCGATCGTCTGACGGAGC 628 Query 89 ggatcag-acagaccgatcgtcggacggatcAGATAGACCGATCGCGTATAAGGGAAAAG 147 || || | ||| ||||||||||||| || ||| | ||| || | |||||| Sbjct 627 GGGTC-GAACAAACCGATCGTCGGATGG----GAT-G---GAT--CG----A--GAAAAG 585 Query 148 TGTTCGAA-GAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATG 206 ||||| || ||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 584 TGTTC-AAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATG 526 Query 207 CAATCTCACCGGTAAAGGGAGA 228 |||||| ||||||||||||||| Sbjct 525 CAATCTTACCGGTAAAGGGAGA 504 > AT4G04655.1 | Symbols: | transposable element gene | chr4:2357418-2364944 FORWARD LENGTH=7527 Length=7527 Score = 147 bits (79), Expect = 9e-35 Identities = 160/195 (82%), Gaps = 21/195 (11%) Strand=Plus/Minus Query 39 ggatagaccgatcgtcggacggatcggatcggacagaccgatcg--t--cgg-acggatc 93 ||| |||||||||||||||||| |||||| ||| || ||||||| | ||| |||| || Sbjct 5148 GGACAGACCGATCGTCGGACGGGTCGGATGGGATAGGCCGATCGTCTGACGGAACGGGTC 5089 Query 94 agacagaccgatcgtcggacggatcAGATAGACCGATCGCGTATAAGGGAAAAGTGTTCG 153 |||||||||||| ||||| || ||| | ||| || | |||||||||||| Sbjct 5088 GGACAGACCGATCATCGGATGG----GAT-G---GAT--CG----A--GAAAAGTGTTCG 5045 Query 154 AAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATGCAATCTC 213 | ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 5044 AGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGCAATCTT 4985 Query 214 ACCGGTAAAGGGAGA 228 |||| |||||||||| Sbjct 4984 ACCGATAAAGGGAGA 4970 > AT4G08760.1 | Symbols: | BEST Arabidopsis thaliana protein match is: nucleolin like 1 (TAIR:AT1G48920.1); Has 36 Blast hits to 36 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:5584739-5591133 REVERSE LENGTH=1566 Length=1566 Score = 141 bits (76), Expect = 4e-33 Identities = 157/191 (82%), Gaps = 25/191 (13%) Strand=Plus/Minus Query 35 ggat-ggatagaccgatcgtcggacggatcggatcggaca-gaccgatcg--t--cgga- 87 |||| ||| |||||||||||||||||| |||||| ||||| | ||||||| | |||| Sbjct 1135 GGATCGGACAGACCGATCGTCGGACGGGTCGGATGGGACATG-CCGATCGTCTGACGGAT 1077 Query 88 cggatcagacagaccgatcgtcggacggatcAGATAGACCGATCGCGTATAAGGGAAAAG 147 ||| || |||||||||||||||||| || ||| | ||| || | |||||| Sbjct 1076 CGGGTCGGACAGACCGATCGTCGGATGG----GAT-G---GAT--CG----A--GAAAAG 1033 Query 148 TGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATGC 207 ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1032 TGTTCGAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATGGATGC 973 Query 208 AATCT-CACCG 217 ||||| ||||| Sbjct 972 AATCTTCACCG 962 > AT4G00140.1 | Symbols: EDA34 | Calcium-binding EF-hand family protein | chr4:51166-53449 REVERSE LENGTH=774 Length=774 Score = 139 bits (75), Expect = 2e-32 Identities = 83/87 (95%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 142 GAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCAT 201 ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 532 GAAAAGTGTTCGAGGAAGCACAAGGATAAGTGCATCCGAACACACCCAAGGGTCGCCCAT 591 Query 202 GGATGCAATCTCACCGGTAAAGGGAGA 228 ||||||||||| ||||||||||||||| Sbjct 592 GGATGCAATCTTACCGGTAAAGGGAGA 618 > AT4G05300.1 | Symbols: | transposable element gene | chr4:2705670-2708158 FORWARD LENGTH=1164 Length=1164 Score = 139 bits (75), Expect = 2e-32 Identities = 178/223 (80%), Gaps = 25/223 (11%) Strand=Plus/Plus Query 29 cggattggat-ggatagaccgatc-g-tcggacggatcggatcggacagaccgatcgtcg 85 ||||| |||| || |||| |||| | |||| | || |||||||||| ||| |||||||| Sbjct 769 CGGATCGGATCGGCCAGACGGATCGGATCGGCCAGA-CGGATCGGACTGACTGATCGTCG 827 Query 86 gacggatc--a---gacagaccgatcgtc-g---g-ac-ggatcAGATAGACCGATC-GC 133 ||||| || | ||||| ||||||||| | | || ||| | || ||||||||| | Sbjct 828 GACGGGTCAGATGGGACAGGCCGATCGTCTGACAGAACGGGA-CGGACAGACCGATCATC 886 Query 134 -G-T---AT--A-AGGGAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACA 185 | | || | | ||||||||||||| ||||||| |||||||||||| |||| |||| Sbjct 887 GGATGGGATGGATCGAGAAAAGTGTTCGAGGAAGCACAAGGATAAGTGCATCCGAGCACA 946 Query 186 CCCAAGGGTCGCCCATGGATGCAATCTCACCGGTAAAGGGAGA 228 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 947 CCCAAGGGTCGCCCATGGATGCAATCTTACCGGTAAAGGGAGA 989 > AT5G29060.2 | Symbols: | transposable element gene | chr5:11128470-11129537 REVERSE LENGTH=1068 Length=1068 Score = 134 bits (72), Expect = 7e-31 Identities = 82/87 (94%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 142 GAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCAT 201 ||||||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||| Sbjct 747 GAAAAGTGTTCGAGGAAGCACAAGGATAAGTGCATCCGAACACACTCAAGGGTCGCCCAT 806 Query 202 GGATGCAATCTCACCGGTAAAGGGAGA 228 |||||||||||||||| |||||||||| Sbjct 807 GGATGCAATCTCACCGATAAAGGGAGA 833 > AT2G12385.1 | Symbols: | transposable element gene | chr2:4991988-4995221 REVERSE LENGTH=3234 Length=3234 Score = 130 bits (70), Expect = 9e-30 Identities = 161/204 (79%), Gaps = 10/204 (5%) Strand=Plus/Plus Query 29 cggattggat-ggatagaccgatcgtcggacggatcggatcggacagaccgatcgtcgga 87 ||||| |||| ||| ||| |||| || ||||||||||||||||||||| ||||||| ||| Sbjct 2176 CGGATCGGATCGGACAGATCGATAGTTGGACGGATCGGATCGGACAGATCGATCGTTGGA 2235 Query 88 cggatcaga-cagaccgatcgtcg-gacggatcAGATAGACC--GAT-CGCGTATAAGGG 142 | | || | || | | | | ||||||| | |||| ||| ||| || ||| Sbjct 2236 -TAAACGGATCGGATCTAACAAAGAGACGGAT--TACCGACCGGGATAGGCGGAT-CGGG 2291 Query 143 AAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATG 202 ||| |||||||| ||||||| | |||||||||| |||||||||||||||||||||||||| Sbjct 2292 AAAGGTGTTCGAGGAAGCACAAAGATAAGTGCATCCGAACACACCCAAGGGTCGCCCATG 2351 Query 203 GATGCAATCTCACCGGTAAAGGGA 226 |||||||| | |||| |||| ||| Sbjct 2352 GATGCAATATTACCGATAAAAGGA 2375 > AT2G12530.1 | Symbols: | transposable element gene | chr2:5106678-5106974 REVERSE LENGTH=297 Length=297 Score = 117 bits (63), Expect = 7e-26 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 142 GAAAAGTGTTCGAAGAAGCACGAGGATAAGTGCAACCGAACACACCCAAGGGTCGCCCAT 201 |||| |||||||| ||||||| | |||||||||| || |||||||||||||||||||||| Sbjct 241 GAAAGGTGTTCGAGGAAGCACAAAGATAAGTGCATCCAAACACACCCAAGGGTCGCCCAT 182 Query 202 GGATGCAATCTCACCGGTAAAGGGAGA 228 ||||||||||| ||| ||||||||||| Sbjct 181 GGATGCAATCTTACCAGTAAAGGGAGA 155 > AT3G47240.1 | Symbols: | transposable element gene | chr3:17393861-17394988 REVERSE LENGTH=720 Length=720 Score = 102 bits (55), Expect = 2e-21 Identities = 61/64 (95%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165 GGATAAGTGCAACCGAACACACCCAAGGGTCGCCCATGGATGCAATCTCACCGGTAAAGG 224 ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 417 GGATAAGTGCATCCGGACACACCCAAGGGTCGCCCATGGATGCAATCTTACCGGTAAAGG 476 Query 225 GAGA 228 |||| Sbjct 477 GAGA 480 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16286750676 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5