BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493812
Length=2148
Score E
Sequences producing significant alignments: (Bits) Value
AT5G41730.1 | Symbols: | Protein kinase family protein | chr5:... 3402 0.0
AT1G64300.1 | Symbols: | Protein kinase family protein | chr1:... 1989 0.0
> AT5G41730.1 | Symbols: | Protein kinase family protein | chr5:16684914-16687145
REVERSE LENGTH=2136
Length=2136
Score = 3402 bits (1842), Expect = 0.0
Identities = 2053/2153 (95%), Gaps = 22/2153 (1%)
Strand=Plus/Plus
Query 1 ATGGAGCAATTCAGACAAATCGGCGAAGTTCTTGGAAGTCTTAATGCACTAATGGTATTA 60
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1 ATGGAGCAATTCAGACAAATCGGAGAAGTTCTTGGAAGTCTAAATGCACTAATGGTATTA 60
Query 61 CAAGATGATATCTTGATCAACCAAAGACAATGTTGTTTGTTGTTAGAACTCTTCAGTTTA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 61 CAAGATGATATCTTGATCAACCAAAGACAATGTTGTTTGTTGTTAGAACTCTTCAGCTTA 120
Query 121 GCTTTCAACACGGTCGCAGAAGAGATCAGACAGAATCTAAAGCTTGAAGAGAAGCATACT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTTTCAACACGGTCGCAGAAGAGATCAGACAGAATCTAAAGCTTGAAGAGAAGCATACT 180
Query 181 AAATGGAGAGCTCTTGAACAACCTTTAAGGGAGCTTTATAGAGTGTTTAAAGAAGGAGAG 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 181 AAATGGAGAGCTCTTGAACAACCTTTAAGGGAGCTTTATAGAGTTTTTAAAGAAGGAGAG 240
Query 241 TTATATGTTAAGCATTGTATGGACAATAGTGATTGGTGGGGTAAAGTTATCAATCTTCAT 300
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 241 TTATATGTTAAGCATTGTATGGATAATAGTGATTGGTGGGGTAAAGTAATCAATCTTCAT 300
Query 301 CAGAATAAAGATTGTGTTGAGTTTCATATACACAACTTGTTCTGTTATTTCTCTGCGGTT 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CAGAACAAAGATTGTGTTGAGTTTCATATACACAACTTGTTCTGTTATTTCTCTGCGGTT 360
Query 361 GTTGAAGCGATCGAGGCTGCTGGTGAGATTTCGGGTCTTGACCCTTCGGAGATGGAGAGA 420
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 361 GTTGAAGCCATCGAGGCTGCTGGTGAGATTTCGGGTCTTGACCCTTCTGAGATGGAGAGA 420
Query 421 AGGAGAGTTGTGTTTTCAAGAAAGTATGATAGAGAGTGGAATGATCCTAAGCTGTTTCAA 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 421 AGGAGAGTTGTGTTTTCAAGAAAGTATGATAGAGAGTGGAATGATCCTAAGATGTTTCAA 480
Query 481 TGGAGGTTTGGGAAACAGTATTTGGTATCGCGGGATATTTGCATTCGGTTCGAGCATTCT 540
|||||||||||||||||||||||| | ||| | |||||||||| ||||| |||||||||
Sbjct 481 TGGAGGTTTGGGAAACAGTATTTGCTCTCGAGAGATATTTGCAGCCGGTTTGAGCATTCT 540
Query 541 TGGAGAGAAGATAGGTGGAATCTAGTGGAGGCATTACAAGAAAAGCGGAAATCGGATAGC 600
|||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||
Sbjct 541 TGGAGAGAAGATAGATGGAATCTAGTGGAGGCATTGCAAGAGAAGAGGAAATCGGATAGC 600
Query 601 GATGATATTGGTAAAACCGAGAAGCGTTTAGCGGATTTGCTGTTGAAGAAGTTAACCGGT 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 601 GATGATATTGGTAAAACCGAGAAGCGTTTAGCTGATTTGCTGTTGAAGAAGTTAACCGGT 660
Query 661 TTGGAGCAGTTTAACGGTAAACTGTTTCCGAGTTCGATACTTCTTGGTTCAAAGGATTAC 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 661 TTGGAGCAGTTTAACGGTAAACTGTTTCCTAGTTCGATACTTCTTGGTTCAAAGGATTAC 720
Query 721 CTGGTGAA-AAGACGGTTAGATGCGGATGGACAATACAAGGAGATTCAATGGTTAGGTGA 779
| |||||| || |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 721 CAGGTGAAGAA-ACGGTTAGATGCAGATGGACAATACAAGGAGATTCAATGGTTAGGTGA 779
Query 780 TAGCTTTGCGGTGAGGCACTTTTTCAGCGATCTTGAGCCGCTAAGTTCTGAAATTTCTTC 839
||| ||||| | ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 780 TAGTTTTGCACTAAGGCACTTTTTCAGCGATCTTGAGCCGCTAAGTTCTGAAATCTCGTC 839
Query 840 TCTGTTATCGCTTTGTCATTCGAATATACTTCAGTACCTTTGTGGATTCTATGATGAAGA 899
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 TCTTTTAGCGCTTTGTCATTCGAATATACTTCAGTACCTTTGTGGATTCTATGATGAAGA 899
Query 900 AAGGAAAGAATGCTTTTTGGTTATGGAGTTAATGCACAAAGATTTGCAGAGCTACATGAA 959
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 900 AAGGAAAGAATGTTTTTTGGTTATGGAGTTGATGCACAAAGATTTGCAGAGCTACATGAA 959
Query 960 GGAGAATTGTGGACCAAGAAGAAGATATCTGTTCTCGATTCCC-GTCGTGATCGATATCA 1018
|||||||||||||||||||||||||||| |||||||||| ||| || ||||| |||||||
Sbjct 960 GGAGAATTGTGGACCAAGAAGAAGATATTTGTTCTCGAT-CCCTGTGGTGATTGATATCA 1018
Query 1019 TGCTGCAAATTGCAAGGGGAATGGAATATCTTCATGGAAATGATATCTTCCATGGAGATT 1078
|| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1019 TGTTGCAAATTGCAAGGGGGATGGAGTATCTTCATGGAAATGATATCTTCCATGGAGATT 1078
Query 1079 TAAACCCCATGAACATTCATTTGAAAGAGAGGAGTCACACCGAAGGTTATTTCCACGCGA 1138
||||||| |||||||||||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct 1079 TAAACCCAATGAACATTCATCTGAAAGAGAGGAGTCACACCGAAGGTTACTTCCATGCGA 1138
Query 1139 AAATATCG-GGATTCGGTTTGTCTTCAGTCGTTAAAGCGCAGTCTTCTCGGTCTTCCTCG 1197
| || | | ||||||||||| |||||||||||||||||||||||||| | || |
Sbjct 1139 AGATTT-GTGGATTCGGTTTATCTTCAGTCGTTAAAGCGCAGTCTTC-C--TC------G 1188
Query 1198 AAACCAGGCACTCCTGATCCTGTAATCTGGTATGCACCTGAAGTTCTAGCAGAGATGGAA 1257
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1189 AAACCAGGCACTCCTGATCCTGTAATATGGTATGCACCTGAAGTTCTAGCAGAGATGGAA 1248
Query 1258 CAAGACCTGAATGGTAAAACTCCGAAATCAAAGTTGACGCATAAAGCTGATGTGTATAGC 1317
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1249 CAAGACCTGAATGGTAAAACTCCGAAATCTAAGTTGACGCATAAAGCTGATGTGTATAGC 1308
Query 1318 TTTGCAATGGTGTGTTTTGAGCTTATAACAGGTAAAGTTCCATTTGAAGATAGTCATCTT 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 TTTGCAATGGTGTGTTTTGAGCTTATAACAGGTAAAGTTCCATTTGAAGATAGTCATCTT 1368
Query 1378 CAAGGTGAACCAATGGCTATCAACATTAGAATGGGAGAGAGACCTCTTTTCCCTTTCCCT 1437
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1369 CAAGGTGAACCAATGACTATCAATATTAGAATGGGAGAGAGACCTCTTTTCCCTTTCCCT 1428
Query 1438 TCACCAAAATACCTCGTTAGTCTGATTAAACGGTGTTGGCACTCAGAACCGAGTCAGCGT 1497
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1429 TCACCAAAATACCTCGTTAGTCTGATCAAACGATGTTGGCACTCAGAACCGAGTCAGCGT 1488
Query 1498 CCTAACTTCTCTTCGATATGTCGGATACTTCGCTACATCAAGAAGTTCCTAGTTGTGAAT 1557
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1489 CCTAACTTCTCTTCGATATGTCGGATACTACGCTACATCAAGAAGTTCCTAGTTGTGAAT 1548
Query 1558 CCAGATCATGGTCATCCTCAAATGCAAACTCCA-TTAGTTGATTGTTGGGACTTAGAAGC 1616
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1549 CCAGATCATGGTCATCCTCAAATGCAAACTCCACTT-GTTGATTGTTGGGACTTAGAAGC 1607
Query 1617 AAGGTTCTTGAGAAAGTTTCCAGGAGATGCAGGGTCTCACACCGCGTCCGTGAATCAAAT 1676
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1608 AAGGTTCTTGAGAAAGTTTCCAGGTGATGCAGGGTCTCACACCGCGTCAGTGAATCAAAT 1667
Query 1677 CCCGTTCCAACTATACTCATACCGGGTTTCGGAAAGAGAGAAGATGAATCCAAACTCAAA 1736
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1668 ACCGTTCCAACTATACTCATACCGGGTTTTGGAAAAAGAGAAGATGAATCCAAACTCAAA 1727
Query 1737 AGAAAGCTCAGA-AGCAAGTGATCAATCTGAAAGCGTTTCAGTGGTTGAAGATCCACCTA 1795
|||||||||||| | | ||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1728 AGAAAGCTCAGAGA-CTAGTGA--A-TCTGAAAGCGTTTCAGTGGTTGAAGATCCACCTA 1783
Query 1796 ATGCCATTATTGCAAGAGATACAAAATCATTGTGTCTAGATACAATATCTGAATACTCAG 1855
||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1784 ATGCCATGATTACAAGAGATACAAAGTCATTGTGTCTTGATACAATATCTGAATACTCAG 1843
Query 1856 ATACAAGATCAGTCTACTCAGAAGCTCCCATCAAAAAGGTCTCAGCTTTAAAGAAAAGCG 1915
||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1844 ATACAAGATCAGTCTACTCGGAAGCTCCCATGAAAAAGGTCTCAGCTCTAAAGAAAAGCG 1903
Query 1916 GCGAAATGGCAAAGCTCAGAAGAAGTCCAAGCTTAGGTTCAGAAAAGTTGAGATCAACAG 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1904 GCGAAATGGCAAAGCTCAGAAGAAGTCCAAGCTTAGGTTCAGAAAAGTTGAGATCGGCAG 1963
Query 1976 GAACTTCACCGGTAAAAGCAAGATCATCGCCAAAAGTATCAGCATTGAGTCCATTTGGAA 2035
|||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1964 GAACTTCAACGGTAAAAGCAAGATCATCGCCAAAAGTATCACCACTGAGTCCATTTGGAA 2023
Query 2036 GAAGTATTAAAGCAAGGAAAGATAATCGATTGCCTTTGAGTCCAATGAGTCCTTTAAGCC 2095
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 2024 GAAGCATTAAAGCAAGGAAGGATAATCGATTGCCTTTGAGTCCAATGAGTCCTTTAACCC 2083
Query 2096 CAGGAATACGTAGACAACATACTGGTCATGCTTCAGACTCTGAGCTTACTTAG 2148
| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2084 CTGGAATACGTAGACAACAGACTGGTCATGCTTCAGACTCTGAGCTTACTTAG 2136
> AT1G64300.1 | Symbols: | Protein kinase family protein | chr1:23863095-23866045
FORWARD LENGTH=2696
Length=2696
Score = 1989 bits (1077), Expect = 0.0
Identities = 1852/2210 (84%), Gaps = 118/2210 (5%)
Strand=Plus/Plus
Query 1 ATGGAGCAATTCAGACAAATCGGCGAAGTTCTTGGAAGTCTT-AATGCACTAATGGTATT 59
|||||||||||||| |||||||| || ||||| ||||| ||| || || ||||||||||
Sbjct 274 ATGGAGCAATTCAGGCAAATCGGAGAGGTTCTAGGAAG-CTTAAACGCGTTAATGGTATT 332
Query 60 ACAAGATGATATCTTGATCAACCAAAGACAATGTTGTTTGTTGTTAGA-ACTCTTCAGTT 118
|||||| |||||||| |||||||||||||||||||||||||||||||| | | |||||||
Sbjct 333 ACAAGACGATATCTTAATCAACCAAAGACAATGTTGTTTGTTGTTAGATA-TTTTCAGTT 391
Query 119 TAGCTTTCAACACGGTCGCAGAAGAGATCAGACAGAATC-TAAAGCTTGAAGAGAAGCAT 177
| | ||||||||| || || |||||||||||||| || | | ||||||||||||||||||
Sbjct 392 TGGGTTTCAACACCGTAGCCGAAGAGATCAGACACAA-CTTGAAGCTTGAAGAGAAGCAT 450
Query 178 ACTAAATGGAGAGCTCTTGAACAACCTTTAAGGGAGCTTTATAGAGTGTTTAAAGAAGGA 237
||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||||||
Sbjct 451 ACTAAATGGAGAGCTCTTGAACAGCCTTTGAGAGAGCTTTATCGAGTTTTTAAAGAAGGC 510
Query 238 GAGTTATATGTTAAGCATTGTATGGAC-AATAGTGATTGGTGGGGTAAAGTTATCAATC- 295
|| | |||||| | ||||||| | | |||| ||||||||||||||||||||||| |
Sbjct 511 GAAATGTATGTTCGGAATTGTAT-GTCTAATAAAGATTGGTGGGGTAAAGTTATCAA-CT 568
Query 296 TTCATCAGAATAAAGATTGTGTTGAGTTTCATATACACAACT-TG-TTCTGTTA-TTTCT 352
|||||||||| |||||||||||||||||||||||||| || | || || ||||| ||| |
Sbjct 569 TTCATCAGAACAAAGATTGTGTTGAGTTTCATATACATAA-TCTGCTT-TGTTACTTT-T 625
Query 353 CTGCGGTTG-TTGAAGCGATCGAGGCTGCTGGTGAGATTTCGGGTCTTGACCCTTCGGAG 411
| || | || | ||||| |||||| | || |||||||||||||||||||||||||| |||
Sbjct 626 CGGCTG-TGATCGAAGCCATCGAGACCGCGGGTGAGATTTCGGGTCTTGACCCTTCTGAG 684
Query 412 ATGGAGAGAAGGAGAGTTGTGTTTTCAAGAAAGTATGATAGAGAGTGGAATGATCCTAAG 471
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 685 ATGGAGAGGAGGAGAGTTGTGTTTTCAAGAAAGTATGATAGGGAGTGGAATGATCCCAAG 744
Query 472 CTGTTTCAATGGAGGTTTGGGAAACAGTATTTGGTATCGCGGGATATTTGCATT-CGGTT 530
|||||||| ||||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct 745 CTGTTTCAGTGGAGGTTTGGGAAACAGTATTTGGTACCGAGGGATATTTGC-TTACGGTT 803
Query 531 CGAGCATTCTTGGAGAGAAGATAGGTGGAATCTAGTGGAGGCATTACAAGAAAAGCGGAA 590
||||||||| ||||||||||||||||||||||| || |||||||| ||||| ||| ||||
Sbjct 804 CGAGCATTCGTGGAGAGAAGATAGGTGGAATCTCGTTGAGGCATTGCAAGAGAAGAGGAA 863
Query 591 ATCGGATAGCGATGATATTGGTAAAACCGAGAAGCGTTTAGCGGATTTGCTGTTGAAGAA 650
|| | |||||||| ||||| || || |||||||||||||| ||||| |||||||||||
Sbjct 864 GTCCAAGAGCGATGAGATTGGCAAGACTGAGAAGCGTTTAGCTGATTTTCTGTTGAAGAA 923
Query 651 GTTAACCGGTTTGGAGCAGTTTAACGGTAAACTGTTTCCGAGTTCGATACTTCTTGGTTC 710
|||| || | || |||||||| ||||| || || || |||||||||||| |||||||
Sbjct 924 ACTAACGGGACTAGAACAGTTTAATGGTAAGCTCTTCCCCAGTTCGATACTTGTTGGTTC 983
Query 711 AAAGGATTACCTGGTGA-AAAGACGGTTAGAT-GCGGATGGACAATACAAGGAGATTCAA 768
|||||||||| |||| | || | |||| | | || ||| || |||||||||||||||
Sbjct 984 TAAGGATTACCAAGTGAGGAGGA-GATTAGGTGGTGG-TGGTCAGTACAAGGAGATTCAA 1041
Query 769 TGGTTAGGTGATAGCTTTGCGGTGAGGCACTTTTTCAGCGATCTTGAGCCGCT-AAGTTC 827
|||||||| ||||| |||| | |||| || |||||| | |||||||||||| | || | |
Sbjct 1042 TGGTTAGGGGATAGTTTTGTGTTGAGACATTTTTTCGGTGATCTTGAGCCGTTGAA-TGC 1100
Query 828 TGAAATTTCTTCTCTGTTATCGCTTTGTCATTCGAATATACTTCAGTACCTTTGTGGATT 887
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101 AGAGATTTCTTCTCTGTTATCGCTTTGTCATTCGAATATACTTCAGTACCTTTGTGGATT 1160
Query 888 CTATGATGAAGAAAGGAAAGAATGCTT-T-TTGGTTATGGAGTTAATGCACAAAGATTTG 945
|||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||
Sbjct 1161 CTATGATGAAGAAAGGAAAGAATG-TTCTCTTG-TTATGGAGTTAATGCACAAAGATTTG 1218
Query 946 CAGAGCTACATGAAGGAGAATTGTGGACCAAGAAGAAGATATCTGTTCTC-GATTCCCGT 1004
| |||||||||||||||||||||||||| |||||||||||||| ||||| | |||||||
Sbjct 1219 AAAAGCTACATGAAGGAGAATTGTGGACCTAGAAGAAGATATCTTTTCTCTG-TTCCCGT 1277
Query 1005 CGTGATCGATATCATGCTGCAAATTGCAAG-GGGAATGGAATATCTTCATGGAAATGATA 1063
|| |||||||| ||||| ||||| || || |||| |||| ||||||||| |||||| |
Sbjct 1278 TGTTATCGATATAATGCTTCAAATCGCGAGAGGGA-TGGAGTATCTTCATTCAAATGAGA 1336
Query 1064 TCTTCCATGGAGATTTAAACCCCATGAACATTCATTTGAAAGAGAGGAGTCACACCGAAG 1123
| |||||||||||||| || || |||||||||| |||||||||||| |||||||||||||
Sbjct 1337 TTTTCCATGGAGATTTGAATCCAATGAACATTCTTTTGAAAGAGAGAAGTCACACCGAAG 1396
Query 1124 GTTATTTCCACGCGAAAATATCGGGATTCGGTTTGTCTTCAGTCGTTA-AAGCGCAGTCT 1182
|||| |||||||||||||| ||||| |||||||| | ||||| | | || | |||||
Sbjct 1397 GTTACTTCCACGCGAAAATCTCGGGTTTCGGTTTAACCTCAGT--TAAGAATC--AGTCT 1452
Query 1183 T---CTCGGTCTTCCTCGAAACCAGGCACTCCTGATCCTGTAATCTGGTATGCACCTGAA 1239
| ||||| ||||||| | |||| ||| |||||||||||||| |||||||||||||||
Sbjct 1453 TTTTCTCGGGCTTCCTCTAGACCAACCACACCTGATCCTGTAATATGGTATGCACCTGAA 1512
Query 1240 GTTCTAGCAGAGATGGAACAAGACCTGAATGGTAAAACTCCGAA-ATCAAAGTTGACGCA 1298
||||||||||||||||||||||| || || |||| | |||| || ||||||||| || ||
Sbjct 1513 GTTCTAGCAGAGATGGAACAAGATCTCAAAGGTACAGCTCC-AAGATCAAAGTTTACACA 1571
Query 1299 TAAAGCTGATGTGTATAGCTTTGCAATGGTGTGTTTTGAGCTTATAACAGGTAAAGTTCC 1358
|||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1572 TAAAGCTGATGTCTATAGCTTTGCTATGGTGTGTTTTGAGCTTATAACCGGTAAAGTTCC 1631
Query 1359 ATTTGAAGATAGTC-ATCTTCAAGGTGA-ACCAATGGCTATCAACATTAGAATGGGAGAG 1416
|||||||||| | | |||||||||| || | |||||||| ||||| |||| |||||||
Sbjct 1632 ATTTGAAGAT-GACCATCTTCAAGGCGATAA-AATGGCTAAGAACATAAGAACGGGAGAG 1689
Query 1417 AGACCTCTTTTCCCTTTCCCTTCACCAAAATACCTCGTTAGTCTGATTAAACGGTGTTGG 1476
|||||||| ||||| |||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 1690 AGACCTCTCTTCCCATTCCCTTCACCAAAATACCTTGTTAGTCTAATCAAACGGTGTTGG 1749
Query 1477 CACTCAGAACCGAGTCAGCGTCCTAAC-TTCTCTTCGATATGTCGGATACTTCGCTACAT 1535
|| |||||||||||||||||||| ||| ||||||||||| || ||||| || ||||||||
Sbjct 1750 CATTCAGAACCGAGTCAGCGTCC-AACATTCTCTTCGATTTGCCGGATCCTCCGCTACAT 1808
Query 1536 CAAGAAGTTCCTAGTTGTGAATCCAGATCATGGTCATCCT-CAAATGCAAA-CTCCAT-T 1592
||||||||||||||| |||||||| || || ||||| ||| ||||| |||| | || | |
Sbjct 1809 CAAGAAGTTCCTAGTGGTGAATCCGGACCACGGTCA-CCTTCAAATCCAAAAC-CC-TCT 1865
Query 1593 AGTTGATTGTTGGGACTTAGAAGCAAGGTTCTTGAGAAAGTT-TCCA-GGAGATGCAGGG 1650
||||||||| ||||| ||||||||||| ||||||| |||||| || | |||| | ||||
Sbjct 1866 AGTTGATTGCTGGGATTTAGAAGCAAGATTCTTGAAAAAGTTCTCAATGGAG-T-CAGGT 1923
Query 1651 TCTCACACCGCG-TCCGTGA-ATCAAATCCCGTTCCAACTATACTCATACCGGGTTTCGG 1708
|||||| | | | || |||| | ||||| || ||||| || ||||||||| || || | |
Sbjct 1924 TCTCACGCAG-GATCAGTGACA-CAAATACCATTCCAGCTTTACTCATACAGGATTGCAG 1981
Query 1709 A-AAGAGAGAAGATGAATCCAAACTC-AA-AA-GAA-AGC-T-CAGAAGCAAGTGA-TCA 1760
| || ||||||||||| |||||||| || || ||| || | |||| ||| | || ||
Sbjct 1982 AGAA-AGAGAAGATGAGTCCAAACTTTAACAAAGAAGAGAATTCAGATGCAGGGGAATCT 2040
Query 1761 AT--CTGAAAGCGTTTCAGTGGTTGAAGATCCACCTAATGCCATTATTGC-AA-GAGATA 1816
| ||||||| |||||||| |||||||| ||||| || || || || || | |||
Sbjct 2041 GTTTCTGAAAGTGTTTCAGTAGTTGAAGAGCCACC-AACAACA--AT-GCCAATGT-ATA 2095
Query 1817 CAAAATCATTGTGTCT-AGATACAATATCTGAATACTCAGATACAAGATCAGTCTACTCA 1875
| || ||||| || || |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2096 CTAAGTCATTATG-CTTAGATGCAATATCTGAATACTCAGATACAAGATCAGTCTACTCA 2154
Query 1876 GAAGCTCCCATCAAAAAGGTC-TCAGCTTTAAAGAAAAGCGGCGA-A--ATGGCAAAGCT 1931
|||||||| ||||||||| | ||||||||||||||||| || || | || ||||
Sbjct 2155 GAAGCTCCAATCAAAAAGA-CATCAGCTTTAAAGAAAAGTGGTGACACCAT--CAAAAA- 2210
Query 1932 CAGAAGAAGTCCAAGCTTAGGTTCAGAAAAGTTGAGATCAACAGGAACTTCACCGGTAAA 1991
|||||||| | ||| || ||||| | | || || ||||| | || || ||||
Sbjct 2211 CAGAAGAAATTCAATCTCAGGTTTA-AG--GTC----TC--CAGGATCATCGCCTATAAA 2261
Query 1992 AGCAAGATCATCGCCAAAAGTATCAGCAT---TGAGTCCATTTGGAAGAAGTATTA--AA 2046
| | |||||| | || ||||||||| || | ||||||||||||||||| | | ||
Sbjct 2262 ACCGAGATCAACACCTAAAGTATCATCACCACTAAGTCCATTTGGAAGAAGCAGCAGCAA 2321
Query 2047 GCAAGG-AAA---G-ATA-ATCGATTGCCTTTGAGTCCAATGAGTCCTTTAAGCCCA-GG 2099
||| | ||| | ||| | |||||||||||||||| |||||||| | |||| | ||
Sbjct 2322 -CAAAGCAAACAAGGATACAA-GATTGCCTTTGAGTCCTATGAGTCCACTGAGCC-ATGG 2378
Query 2100 AATACGTAGACAACATA-CTGGTCATGCTTCAGACTCTGAGCTTACTTAG 2148
|| ||||||||||| || |||||| ||||||||||||||||||||| |||
Sbjct 2379 AAGACGTAGACAAC-TAACTGGTCCTGCTTCAGACTCTGAGCTTACATAG 2427
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106525556490
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5