BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493822
Length=1735
Score E
Sequences producing significant alignments: (Bits) Value
AT5G41670.1 | Symbols: | 6-phosphogluconate dehydrogenase fami... 2748 0.0
AT1G64190.1 | Symbols: | 6-phosphogluconate dehydrogenase fami... 1705 0.0
> AT5G41670.1 | Symbols: | 6-phosphogluconate dehydrogenase family
protein | chr5:16665283-16667171 REVERSE LENGTH=1813
Length=1813
Score = 2748 bits (1488), Expect = 0.0
Identities = 1622/1687 (96%), Gaps = 8/1687 (0%)
Strand=Plus/Plus
Query 1 ACCACCAACCTCCGTCAAAACGCTAACctctctctctctctctctctctctctatctctc 60
||||||||||||||||||||| |||| | | || ||||||||||||||| || || || |
Sbjct 1 ACCACCAACCTCCGTCAAAACCCTAAAC-CACTATCTCTCTCTCTCTCT-TC-ATATCGC 57
Query 61 AAAAATGGAGTCCGCCGCTCTATCTCGCATCGGTCTCGCCGGTCTTGCAGTCATGGGACA 120
|| ||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 58 AACAATGGAGTCCGTCGCTCTATCTCGCATAGGTCTCGCCGGTCTCGCAGTCATGGGACA 117
Query 121 AAACCTCGCTTTAAACATCGCCGAGAAAGGATTCCCAATCTCCGTCTACAATCGAACCAC 180
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 118 AAACCTCGCCTTAAACATCGCCGATAAAGGATTCCCAATCTCCGTCTACAATCGAACCAC 177
Query 181 TTCCAAAGTCGACGAAACCCTAGATCGTGCCTCCGACGAAGGAAAACTCCCAGTCGCTGG 240
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 178 TTCCAAAGTCGACGAAACCTTAGATCGTGCCTCCAACGAAGGAAAACTCCCAGTCGCTGG 237
Query 241 TCAATACTCTCCTCGCGATTTCGTTCTCTCCATCCAACGGCCTAGATCCGTTATCATCCT 300
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 238 TCAATACTCGCCTCGCGATTTCGTTCTCTCGATCCAACGGCCTAGATCCGTTATCATCCT 297
Query 301 TGTCAAAGCCGGTGCTCCCGTTGACCAAACAATCTCCGCACTCTCCGAATACATGGAGCC 360
|||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct 298 TGTCAAAGCCGGTGCTCCCGTTGACCAAACCATCTCTGCTCTCTCTGAATACATGGAGCC 357
Query 361 TGGTGATTGTATCATCGACGGTGGAAATGAGTGGTATCAGAACACAGAACGACGAATCGT 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 358 TGGTGATTGTATCATCGACGGTGGAAATGAGTGGTATCAGAACACAGAGCGACGAATCGT 417
Query 421 TGAAGCTGAGAAGAAAGGATTGCTTTATTTAGGTATGGGAGTCTCTGGTGGTGAAGAAGG 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 418 TGAAGCTGAGAAGAAAGGATTGCTTTATTTAGGTATGGGAGTCTCCGGTGGTGAAGAAGG 477
Query 481 AGCTCGTAATGGTCCTTCGCTTATGCCTGGTGGATCTTTCACTGCGTATAATAATGTTAA 540
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 478 AGCTCGTAATGGTCCTTCTCTTATGCCTGGTGGATCTTTCACTGCGTATAACAATGTTAA 537
Query 541 AGATATTCTTGAGAAAGTTGCTGCTCAAGTTGAAGATGGTCCTTGTGTTACTTACATTGG 600
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 538 AGATATTCTTGAGAAAGTTGCTGCTCAAGTCGAAGATGGTCCTTGTGTTACATACATTGG 597
Query 601 AGAAGGTGGATCTGGGAATTTTGTGAAAATGGTTCATAATGGGATTGAATATGGTGATAT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 AGAAGGTGGATCTGGGAATTTTGTGAAAATGGTTCATAATGGGATTGAATATGGTGATAT 657
Query 661 GCAGCTGATTTCGGAGGCGTATGATGTGTTGAAGAACGTTGGTGGATTGAGTAATGATGA 720
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 658 GCAGCTGATTTCGGAGGCGTATGACGTGTTGAAGAACGTTGGTGGATTGAGTAATGATGA 717
Query 721 ATTGGCTGAGATCTTTACGGAGTGGAATCGAGGTGAGCTTGAGAGTTTCTTGGTTGAGAT 780
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 ATTGGCTGAGATCTTCACGGAGTGGAATCGAGGTGAGCTTGAGAGTTTCTTGGTTGAGAT 777
Query 781 TACATCGGATATTTTTAGGGTTAAGGATGATTATGGTGATGGAGAGTTAGTGGATAAGAT 840
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TACTTCGGATATATTTAGGGTTAAGGATGATTATGGTGATGGAGAGTTAGTGGATAAGAT 837
Query 841 TTTGGATAAGACTGGTATGAAAGGTACCGGGAAATGGACGGTTCAGCAGGCGGCTGAGCT 900
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 838 TTTGGATAAGACTGGTATGAAAGGTACAGGGAAATGGACGGTTCAGCAGGCGGCTGAGCT 897
Query 901 TTCTGTTGCGGCGCCTACTATTGCTGCGTCTTTGGATTGTAGATACTTGAGTGGATTGAA 960
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 898 TTCTGTTGCGGCGCCTACGATTGCTGCGTCGTTGGATTGTAGATACTTGAGTGGATTGAA 957
Query 961 GGATGAGAGAGAGAATGCTGCTAAAGTGTTGGAAGAAGCTGGTTTGAAGGAGGATATTGG 1020
||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 958 GGATGAGAGGGAGAATGCTGCTAAAGTTTTGGAAGAAGCTGGATTGAAGGAGGATATCGG 1017
Query 1021 TTCTGCGTCTCGTGGTGTTGATAAGAAGAGGTTGATTGATGATGTGAGGCAAGCTTTGTA 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 TTCTGCGTCTCGTGGTGTTGATAAGAAGAGGTTGATTGATGATGTGAGGCAAGCTTTGTA 1077
Query 1081 TGCTTCTAAGATCTGTAGTTATGCTCAAGGGATGAATTTGCTTAGGGCTAAGAGTTTAGA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 TGCTTCTAAGATCTGTAGTTATGCTCAAGGGATGAATTTGCTTAGGGCTAAGAGTTTAGA 1137
Query 1141 GAAAGGGTGGGATTTGAATTTGGGTGAAATGGCTAGGATTTGGAAAGGCGGGTGTATTAT 1200
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1138 GAAAGGTTGGGACTTGAATTTGGGTGAAATGGCTAGGATTTGGAAAGGTGGGTGTATTAT 1197
Query 1201 CAGGGCGGTATTCTTGGACAGGATCAAGAAAGCTTATCAGAGAAACCCGAATTTGGCAAA 1260
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1198 CAGGGCGGTTTTCTTGGACAGGATCAAGAAAGCTTACCAGAGAAACCCGAATTTGGCGAG 1257
Query 1261 CTTAGTGGTTGATCCTGATTTTGCTAAAGAGATGGTTCAGAGGCAAGCTGCGTGGAGGAG 1320
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1258 CTTAGTGGTTGATCCTGATTTTGCTAAAGAGATGGTTCAGAGGCAAGCTGCATGGAGGAG 1317
Query 1321 AGTGGTGGGTCTTGCTATCTCTGCTGGGATAAGCACACCAGGAATGTGCGCAAGTTTAGC 1380
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1318 AGTGGTGGGTCTTGCTATATCTGCTGGGATTAGCACACCAGGAATGTGCGCAAGTTTAGC 1377
Query 1381 GTATTTCGACACTTACAGGCGTGCCAGATTACCTGCGAATCTGGTTCAGGCGCAGAGAGA 1440
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1378 GTATTTCGACACTTACAGGCGTGCTAGATTACCTGCGAATCTGGTTCAGGCGCAGAGAGA 1437
Query 1441 TCTCTTTGGAGCTCATACATATGAGAGAACCGATCGTCCTGGTGCATACCACACTGAATG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TCTCTTTGGAGCTCATACATATGAGAGAACCGATCGTCCTGGTGCATACCACACTGAATG 1497
Query 1501 GACTAAGCTTGCAAGGAAGAGTCAGTAAAGCATCGACACAGTCCCTTGATT-GAGGT-TA 1558
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct 1498 GACTAAGCTTGCAAGGAAGAGTCAGTAAAGCATGGACACAGTCCCTTGATTTGAGGGCT- 1556
Query 1559 TTCTCTGCGGCATAGAACACGAAAACAAATTGTTTCAGCGTATTTTTGTTGAGTTATAAT 1618
|| | | | ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1557 TTATTT-CATCATAGAACACGAAAACAAATTGTTTCAGCTTATTTTTGTTGAGTTATAAT 1615
Query 1619 AAGAAATGCAATGCCC-TGGACTCTCTGTATCTGTCTGTTGTTGATATCTGGAGAGTTTC 1677
|||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1616 AAGAAATGCAATGCCCCTTGACTCTCTGTATCTGTCTGTTGATGATATCTGGAGAGTTTC 1675
Query 1678 CTTTATT 1684
|||||||
Sbjct 1676 CTTTATT 1682
> AT1G64190.1 | Symbols: | 6-phosphogluconate dehydrogenase family
protein | chr1:23825328-23827136 REVERSE LENGTH=1809
Length=1809
Score = 1705 bits (923), Expect = 0.0
Identities = 1310/1494 (88%), Gaps = 37/1494 (2%)
Strand=Plus/Plus
Query 44 ctc-tctctctatctctcAAAAATGGAGTCCGCCGCTCTATCTCGCATCGGTCTCGCCGG 102
||| |||||||||||| | ||||||||||||||| ||||| || ||||||||||||||
Sbjct 107 CTCATCTCTCTATCTC-C---AATGGAGTCCGCCGCACTATCCCGAATCGGTCTCGCCGG 162
Query 103 TCTTGCAGTCATGGGACAAAACCTCGCTTTAAACATCGCCGAGAAAGGATTCCCAATCTC 162
|| || || ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 163 ACTCGCCGTGATGGGCCAAAACCTCGCCTTAAACATCGCCGAGAAAGGTTTCCCAATCTC 222
Query 163 CGTCTACAATCGAACCACTTCCAAAGTCGACGAAACCCTAGATCGTGCCTCCGACGAAGG 222
|||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct 223 AGTCTACAATCGAACCACTTCCAAAGTCGACGAAACCCTAGATCGAGCCGCCGTCGAAGG 282
Query 223 AAAACTCCCAGTCGCTGGTCAATACTCTCCTCGCGATTTCGTTCTCTCCATCCAACGGCC 282
||| ||||||||| | || ||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 283 AAACCTCCCAGTCTCCGGCCAATACTCTCCCCGCGATTTCGTCCTCTCGATCCAACGGCC 342
Query 283 TAGATC-CGTTATCATCCTTGTCAAAGCCGGTGCTCCCGTTGACCAAACAATCTCCGCAC 341
|||||| | | |||||||| |||||||| || ||||||||||||||||||||| ||| |
Sbjct 343 TAGATCTC-TCATCATCCTCGTCAAAGCTGGAGCTCCCGTTGACCAAACAATCGACGC-C 400
Query 342 T-CTCCGAATACATGGAGCCTGGTGATTGTATCATCGACGGTGGAAATGAGTGGTATCAG 400
| |||||||||||||||||| || ||||| ||||||||||||||||| || |||||||||
Sbjct 401 TTCTCCGAATACATGGAGCCAGGAGATTGCATCATCGACGGTGGAAACGAATGGTATCAG 460
Query 401 AACACAGAACGACGAATCGTT-GAAGCTGAG-AAGAAAGGATTGCTTTATTTAGGTATGG 458
|||||||| ||||| ||| | ||||||||| || ||||||||||| |||||||||||||
Sbjct 461 AACACAGAGCGACGGATC-TCCGAAGCTGAGCAA-AAAGGATTGCTCTATTTAGGTATGG 518
Query 459 GAGTCTCTGGTGGTGAAGAAGGAGCTCGTAATGGTCCTTCGCTTA-TGCCTGGTGGATC- 516
||||||| || || ||||||||||||||||| ||||||||| ||| |||||||||||||
Sbjct 519 GAGTCTCCGGCGGCGAAGAAGGAGCTCGTAACGGTCCTTCG-TTAATGCCTGGTGGATCA 577
Query 517 TTTCACTGCGTATAATAATGTTAAAGATATTCTTG-AGAAAGTTGCTGCTCAAGTTGAAG 575
||||| || ||| |||| | ||||||||| ||| ||||||| || |||||||||||||
Sbjct 578 TTTCAA-GCTTATGATAACATCAAAGATATT-TTGGAGAAAGTCGCAGCTCAAGTTGAAG 635
Query 576 ATGGTCCTTGTGTTACTTACATTGGAGAAGGTGGATCTGGGAATTTTGTGAAAATGGTTC 635
|||| ||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||
Sbjct 636 ATGGACCTTGTGTTACTTACATCGGAGAAGGTGGATCTGGAAATTTCGTGAAGATGGTTC 695
Query 636 ATAATGGGATTGAATATGGTGATATGCAGCTGATTTCGGAGGCGTATGATGTGTTGAAGA 695
||||||||||||| ||||| |||||||| |||| || || || ||||||||||||||||
Sbjct 696 ATAATGGGATTGAGTATGGAGATATGCAATTGATCTCTGAAGCTTATGATGTGTTGAAGA 755
Query 696 ACGTTGGTGGATTGAGTAATGATGAA-TTGGCTGAGATCTTT-ACGGAGTGGAAT-CGAG 752
||||||||||||| || || || || ||| ||||||| ||| || ||||||||| | ||
Sbjct 756 ACGTTGGTGGATTAAGCAACGAGGAGCTTG-CTGAGAT-TTTCACTGAGTGGAATTC-AG 812
Query 753 GTGAGCTTGAGAGTTTCTTGGTTGAGATTACATCGGATATTTTTAGGGTTAAGGATGA-T 811
|||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| |
Sbjct 813 GTGAGCTTGAGAGTTTCTTGGTTGAGATAACTTCTGATATATTTAGGGTTAAGGATGAGT 872
Query 812 TATGGTGATGGAGAGTTAGTGGATAAGATTTTGGATAAGACTGGTATGAAAGGTACCGGG 871
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 873 T-TGGTGATGGAGAGTTAGTTGATAAGATTTTGGATAAGACTGGTATGAAAGGTACTGGG 931
Query 872 AAATGGACGGTTCAGCAGGCGGCTGAGCTTTCTGTTGCGGCGCCTACTATTGCTGCGTCT 931
||||||||||| ||||| ||||| ||||| |||||||| || || || |||||||| ||
Sbjct 932 AAATGGACGGTGCAGCAAGCGGCGGAGCTGTCTGTTGCAGCTCCGACGATTGCTGCTTCG 991
Query 932 TTGGATTGTAGATACTTGAGTGGATTGAAGGATGAGAGAGAGAATGCTGCTAAAGTGTTG 991
||||||||||| || |||||||| ||||| |||||||| |||||||| || |||||||||
Sbjct 992 TTGGATTGTAGGTATTTGAGTGGGTTGAAAGATGAGAGGGAGAATGCAGCGAAAGTGTTG 1051
Query 992 GAAG-AAGCTGGTTTGAAGGAGGATATTGGTTCTGCGTCTCGTGGTGTTGATAAGAAGAG 1050
| | ||||||| ||||| || || |||||||||||||| |||| | |||||||||||
Sbjct 1052 -AGGGAAGCTGGATTGAAAGAAGAGATTGGTTCTGCGTCGAGTGGAATCGATAAGAAGAG 1110
Query 1051 GTTGATTGATGATGTGAGGCAAGCTTTGTATGCTTCTAAGATCTGTAGTTATGCTCAAGG 1110
||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1111 ATTGGTTGATGATGTTAGGCAAGCTTTGTATGCTTCCAAGATTTGTAGTTATGCTCAAGG 1170
Query 1111 GATGAATTTGCTTAGGGCTAAGAGTTTAGAGAAAGGGTGGGAT-TTGAATTTGGGTGAAA 1169
||||||||||||||| ||||||||||||||||| | || ||| |||||||| ||||||
Sbjct 1171 GATGAATTTGCTTAGAGCTAAGAGTTTAGAGAA-GAGTTGGAACTTGAATTTTGGTGAAT 1229
Query 1170 TGGCTAGGATTTGGAAAGGCGGGTGTATTATCAGGGCGGTATTCTTGGACAGGATCAAGA 1229
||||||||||||||||||| || |||||||| || ||||| |||||||| ||||||||||
Sbjct 1230 TGGCTAGGATTTGGAAAGGTGGTTGTATTATAAGAGCGGTTTTCTTGGATAGGATCAAGA 1289
Query 1230 AAGCTTATCAGAGAAACCCGAATTTGGCAAA-CTTAGTGGTTGATCCTGATTTTGCTAAA 1288
||||||| ||||| |||||| | ||||| | ||| |||||||||||||| |||||||||
Sbjct 1290 AAGCTTACCAGAGGAACCCGGACTTGGCTAGTCTT-GTGGTTGATCCTGAGTTTGCTAAA 1348
Query 1289 GAGATGGTTCAGAGGCAAGCTGCGTGGAGGAGAGTGGTGGGTCTTG-CTATCTCTGCTGG 1347
|||||||||||||| |||||||| ||||| ||||| || ||| ||| || | ||||||||
Sbjct 1349 GAGATGGTTCAGAGACAAGCTGCTTGGAGAAGAGTTGTTGGT-TTGGCTGTTTCTGCTGG 1407
Query 1348 GATAAGCACACCAGGAATGTGCGCAAGT-TTAGCGTATTTCGACACTTACAGGCGTGCCA 1406
||| ||||| || |||||||| || ||| || ||||||||||| ||||| || ||||| |
Sbjct 1408 GATTAGCACGCCTGGAATGTGTGCTAGTCTT-GCGTATTTCGATACTTATAGACGTGCTA 1466
Query 1407 GATTACCTGCGAATCTGGTTCAGGCGCAGAGAGATCTCTTTGGAGCTCATACATATGAGA 1466
|||| || ||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1467 GATTGCCGGCGAATCTGGTTCAGGCGCAGAGAGATCTCTTTGGAGCTCACACTTATGAGA 1526
Query 1467 GAACCGATCGTCCTGGTGCATACCACACTGAATGGACTAAGCTTGCAAGGAAGA 1520
||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1527 GAACCGATCGTCCTGGTGCGTACCATACTGAATGGACTAAGCTTGCCAGGAAGA 1580
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85792731405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5