BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493824
Length=632
Score E
Sequences producing significant alignments: (Bits) Value
AT5G41650.1 | Symbols: | Lactoylglutathione lyase / glyoxalase... 878 0.0
AT1G64185.1 | Symbols: | Lactoylglutathione lyase / glyoxalase... 305 3e-82
> AT5G41650.1 | Symbols: | Lactoylglutathione lyase / glyoxalase
I family protein | chr5:16654913-16655810 FORWARD LENGTH=629
Length=629
Score = 878 bits (475), Expect = 0.0
Identities = 584/634 (92%), Gaps = 18/634 (3%)
Strand=Plus/Plus
Query 1 TATTTCACACTCGTTCGTCTTCGTCTAGAGAGAGATGGCAACGGCGTCGTTTAGGTGGAT 60
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 10 TATTTTACACTCGTTCGTCTTCGTCTAGAGAGAGATGGCGACGGCGTCGTTTAGGTGGAT 69
Query 61 TCTGCAGCTTCACAGAGACGTACCAAAAGCTGCTCGATTCTATGCGCAAGGTCTCGACTT 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 70 TCTGCAGCTTCACAGAGACGTACCAAAAGCTGCTCGATTCTATGCTCAAGGTCTCGACTT 129
Query 121 CTCCGTCAATGTCGTCACTTTACGCTGGGCTGAGCTCCATTCTGGTCCTCTCAAGCTAGC 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 130 TTCCGTCAATGTCGTCACTTTACGCTGGGCTGAGCTCCATTCTGGTCCTATCAAGCTAGC 189
Query 181 TCTTATGCAATCTCCTAGCGATCATGTTGCTGAGAAGGGATACTCATCGCTTCTATCGTT 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 190 TCTTATGCAATCTCCTAGCAATCATGTTGCTGAGAAGGGATACTCATCGCTTCTATCGTT 249
Query 241 CACACAAGAGGCTGCAGACATTAATACAACAGTGACCAAACTTATGGCTTTGGGAGCAGA 300
||| || | | |||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 250 --CAC---AGTC-ACTGACATTAATACAACAGTGACTAAACTTATGGCTTTAGGAGCTGA 303
Query 301 ATTAGATGGCACTATCAAGTATGAGATACATGGAAAGGTTGCGGCTATGAGATGCCCTGA 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 304 ATTAGATGGCACTATCAAGTATGAGATACATGGAAAGGTTGCGGCTATGAAATGCCCTGA 363
Query 361 TGGTTACATGTTAGGGCTTTATGAGGCTGCATAAGCATATGGATAGAAATAGAATTGAAG 420
||||||||||||||| |||||||||||||||| |||| | || | |||||||||||||
Sbjct 364 TGGTTACATGTTAGGCCTTTATGAGGCTGCATGAGCA-A---AT-G-AATAGAATTGAAG 417
Query 421 CCTGAAAGAAAACCAATTCTGCATAGAATAGGTTTTGTTTTAAGAAATCATATTCATAAG 480
|||||||| || |||||| |||||||| || | |||| ||| ||| ||||||| |||||
Sbjct 418 CCTGAAAGGAAGCCAATTATGCATAGAGTA-GATTTG-TTT-AGAGATCATATCCATAAT 474
Query 481 CTCTTTGAAGCTTTTGTTTACTTCTAAGAAACCAAAGCCACTATTAGACTTTGAAATTGG 540
|||||||||||| |||| ||||||| ||||||| |||||||||||| ||||| | |||||
Sbjct 475 CTCTTTGAAGCTATTGTATACTTCTTAGAAACCTAAGCCACTATTATACTTT-ATATTGG 533
Query 541 TTCATGTTCAAGTTGCTCTTCACATTGTTTCTCTAGTAAGCTTTTCTCAAGTCAATTTTG 600
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 TTCATGTTTAACTTGCTCTTCACATTGTTTCTCTAGTAAGCTTTTCTCAAGTCAATTTTT 593
Query 601 T-CC-TTCATTATATATAATATCCTGAAAGTGAC 632
| || |||||||||||||||||||||||||||||
Sbjct 594 TTCCATTCATTATATATAATATCCTGAAAGTGAC 627
> AT1G64185.1 | Symbols: | Lactoylglutathione lyase / glyoxalase
I family protein | chr1:23824514-23825383 FORWARD LENGTH=601
Length=601
Score = 305 bits (165), Expect = 3e-82
Identities = 287/344 (83%), Gaps = 15/344 (4%)
Strand=Plus/Plus
Query 27 AGAGAGAGATGGCAACGGCGTCGTTTAGGTGGATTCT-GCAGCTTCACAGAGACGTACCA 85
|||| ||||||||||||||||||||||||||||| || |||||| |||||||||||||||
Sbjct 6 AGAGCGAGATGGCAACGGCGTCGTTTAGGTGGAT-CTTGCAGCTCCACAGAGACGTACCA 64
Query 86 AAAGCTGCTCGATTCTATGCGCAAGGTCTCGACTTCTCCGTCAATGTCGTCACTTTACGC 145
||||| ||||||||||||| | |||||||||| ||||||||||||||||| || |||||
Sbjct 65 AAAGCGGCTCGATTCTATGAGAAAGGTCTCGATTTCTCCGTCAATGTCGTTACCTTACGT 124
Query 146 TGGGCTGAGCTCCATTCTGGTCCTCTCAAGCTAGCTCTTATGCAATCTCCTAGCGATCAT 205
|||||||| || || || ||||| ||||||||||||||||||||| |||| ||||| |||
Sbjct 125 TGGGCTGAACTTCAGTCAGGTCCCCTCAAGCTAGCTCTTATGCAAGCTCCCAGCGAGCAT 184
Query 206 GT--TGC-TGAGAAGGGATACTCATCGCTT-CTATCGTTCACACAAGAGGCTGCAGACAT 261
|| || |||||| |||||||| ||| || ||||||||||| || | ||||||
Sbjct 185 GTGATGAGTGAGAAAGGATACTCTTCG-TTACTATCGTTCACTGTAG---C---AGACAT 237
Query 262 TAATACAACAGTGACCAAACTTATGGCTTTGGGAGCAGAATTAGATGGCACTATCAAGTA 321
|||||||||| | | |||||||||| || ||||| ||| | |||||| ||||||| ||
Sbjct 238 TAATACAACAATCTCTAAACTTATGGAATTAGGAGCTGAACTCGATGGCTCTATCAAATA 297
Query 322 TGA-GATACATGGAAAGGTTGCGGCTATGAGATGCCCTGATGGT 364
||| | | ||||| |||||||| || ||||||| | |||||||
Sbjct 298 TGAAG-TCCATGGCAAGGTTGCTTCTGTGAGATGTCTTGATGGT 340
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 30492127229
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5