BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493888
Length=1928
Score E
Sequences producing significant alignments: (Bits) Value
AT5G40880.1 | Symbols: | WD-40 repeat family protein / zfwd3 p... 2488 0.0
AT5G49200.1 | Symbols: | WD-40 repeat family protein / zfwd4 p... 1399 0.0
AT2G15271.1 | Symbols: | Pseudogene of AT5G49200; WD-40 repeat... 344 2e-93
> AT5G40880.1 | Symbols: | WD-40 repeat family protein / zfwd3
protein (ZFWD3) | chr5:16378895-16381335 FORWARD LENGTH=2135
Length=2135
Score = 2488 bits (1347), Expect = 0.0
Identities = 1769/1961 (90%), Gaps = 75/1961 (4%)
Strand=Plus/Plus
Query 27 GTTCGAAATCGTTCTCTAATCGAAGATCTAGATTCTACATACGTTTGATCTCTCAGGTTT 86
|||||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 67 GTTCGAAACCGTTCCCTAATCGAAGATCTAGATTCAACATACGTTTTATCTCTCAGGTTT 126
Query 87 GCTTCTTCTTCGACTA-----------CGATTATGATGATG---TCTTCTTCCTGCTTTC 132
|||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 127 GCTTCTTCTTCGACTACGTTTTCTCCGCGATTATGATGATGCCTTCTTCTTCCTGCTTTC 186
Query 133 ACTTTGGGTTGGGTTTCTTCATCTCCTCGATTCTCGATCCTCCTATTCGCATCGATACCC 192
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 187 ACTTTGGGTTGCGTTTCTTCATCTCCTCGATTCGCGATCCTCCTATTCGCATCGATACCC 246
Query 193 AGAAATCTAGGGTTTCCACCG-T-TC-ACC-G-ATAA------GGAT------GAT--GG 233
||| ||||||||||||||||| | | | | |||| || | ||| ||
Sbjct 247 AGAGATCTAGGGTTTCCACCGATATGGATATGGATAAATCTTAGGGTTTCACCGATAAGG 306
Query 234 ATT-------CGAGTTTCTCTTCTATGTACATTCGTCGGAGCTAGATCTTCTCTTCTTGT 286
||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 307 ATTATGGATTCGAGTTTCTCTTCTATGTACATT-GTCGGAGCTACATCTTCTCTTCTTGT 365
Query 287 TGTTATTGTTATATTTAGGGTTTTGA-TATGGCATTTAGGTTAGGATACTGA-ATGGT-- 342
||||| ||||| ||||||||| || || ||||||| | || | | | | |||
Sbjct 366 TGTTAGTGTTA------GGGTTTTGAATA-GGT-TTTAGGTGATGA-ATT-ATA-GGTTT 414
Query 343 -GA-TTGTGAAATTAGAGATTTATTTGGTTTTT-CTGTGGACGTGATGCTCTATGATACC 399
|| || |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 415 AGAGTTCTGAA-TTAGAGATTTATTTGGTTTTTTCTGTGGACGTGGTGCTCTATGATACC 473
Query 400 TGGATTGAATTTAGGGTTACAGACAGAGGA-T-TGTTGCTTTTGATTCTCTAGCGATTGG 457
|||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||
Sbjct 474 TGGATTGAATTTGGGGTTACAGACAGAAGAATGTGTTGCTTTTGATTCTCTAGCGATTGG 533
Query 458 GGGAATTCAGAAACTACTTACTTCTGGACTTGTCACCCTTCTGAAAATTTATGTATGG-- 515
|| |||||||||||| ||| ||||||||||||| |||||| |||||||||||||||||
Sbjct 534 GG-AATTCAGAAACTCCTTGCTTCTGGACTTGTTACCCTTGTGAAAATTTATGTATGGGT 592
Query 516 -ATCA-TCAT---GGATGAAGCAA-CAGTTATCGACTCTGTGGTTCAGTCTTCTAAAGTT 569
|||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 593 CATCAGTCATCATGGATGAAGCAAACAGTTATCGACTCTGTGGTTCAGTCTTCTAAAGTT 652
Query 570 GGTATTTTCTCAATGTTTAGTATGGATTACAAGGCGCCAAGGAGGTACTCAAACGGAAGG 629
||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 653 GGTGTTTTCTCAATGTTTAGTATGGATTACAAGGCGCCAAGGAAATACTCACACGGAAGG 712
Query 630 AATTTCGGAGTTGCTAGACAGCAAGATTTCGCAGCAGATATAGTTACGAGAAGACCTTAT 689
||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 713 AATTTTGGAGTTGCGAGACAGCAAGATTTTGCAGCAGATATAGTTACGAGAAGACCTTAT 772
Query 690 GCCCCGTATAACAATGGAATGAAGAAAGGTCCAAATAATTTGTCAAGGAATCTGGTTTGG 749
||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct 773 GCCCCGTATGACAATGGTATGAAGAAAGGTCCTAATAAGTTGTCAAGGAATCTGGTTTGG 832
Query 750 ACGTCAAAAGAGTACAAAGCACCAGATGGCGATAGGCCACGGAAGAATGCAGCCAATGGG 809
|||||||||||||||||| ||||||| || | |||||| || |||||||||||||||||
Sbjct 833 ACGTCAAAAGAGTACAAATCACCAGAGGGAAACAGGCCAAGGCAGAATGCAGCCAATGGG 892
Query 810 TCAACGAAACCACCAGTTTTAGGCACAGGACATTGTGTGTCAAACCAGCCGAGGAAGAGT 869
||| ||||||||| |||| |||||||||||||| |||| ||||||||||||||||||| |
Sbjct 893 TCAGCGAAACCACAAGTTATAGGCACAGGACATCGTGTATCAAACCAGCCGAGGAAGAAT 952
Query 870 GCTGTATATGGGCCAAGGAGCTCTTCTATTTCAGACACCAGAGGTTGGGGGTCGAGAGAT 929
||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |
Sbjct 953 GCTGTGTATGGGCCAAGGAGCTCTTCTCTTTCAGACACCAGAGGTTGTGGGCCGAGAC-T 1011
Query 930 -AACAGCAGTCCTAAAAGGAGTGTATGTAAGTATTGGAAAGCTGGAAACTGCAAAAGGGG 988
|| ||||||| |||| |||||| ||||| | |||||||| |||||||||||||| |||
Sbjct 1012 CAATGGCAGTCCCAAAAAGAGTGTGTGTAATTTTTGGAAAGATGGAAACTGCAAAAAGGG 1071
Query 989 TGAGCAGTGCCAGTTCTTACACTCTTGGTCTTGTTTCCCTGGATTGGCCATGGTAGCTGC 1048
||| | ||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1072 CGAGAAATGCCAGTTCTTACACTCTTGGTCTTGTTTTCCTGGACTGGCCATGGTAGCTGC 1131
Query 1049 TCTTGAAGGACACAAGAAGGATCTAAAGGGGATCGCGCTCCCTCAGGGTTCAGATAAACT 1108
|||||||||||||||||| ||| | ||||| ||||| || ||||||||||||||||||||
Sbjct 1132 TCTTGAAGGACACAAGAATGATATTAAGGGAATCGCCCTTCCTCAGGGTTCAGATAAACT 1191
Query 1109 CTTTTCAGTCAGTAGTGATGGTACATTGCGAATTTGGGACTGCAATTCTGGTCAGTGTGT 1168
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1192 CTTTTCAGTCAGTGGTGATGGTACATTGCTAATTTGGGACTGCAATTCTGGTCAGTGTGT 1251
Query 1169 AC-ATTCCATCAACCTCCAGGCAGAAGCAGGGTCTCTAATCAGTGAAGGCCCATGGGTTT 1227
| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1252 TCGAT-CCATCAACCTCCAGGCAGAAGCAGGGTCTCTAATTAGTGAAGGACCATGGGTTT 1310
Query 1228 TCCTTGGCTTGCCAAATGCTGTAAAGGCTTTTAATGTTCAAACCAGTAAAGATTTGCATC 1287
|||||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||
Sbjct 1311 TCCTTGGCTTGCCAAACGCTGTAAAGGCTTTTAACGTTCAAAACAGTAAAGATGTGCATC 1370
Query 1288 TTGAAGGGGTGGTTGGTCAGGTGCATGCAATGACTGTTGCAAACGGAATGCTTTTTGCTG 1347
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1371 TTGAAGGGGTGGTTGGTCAGGTGCATGCAATGACTGCTGCAAACGGAATGCTTTTTGCTG 1430
Query 1348 GAACAAGTTCTGGTAGTATATTGGTCTGGAAAGCTACAGACTCTGAGTCTGATCCATTCA 1407
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1431 GAACAAGTTCTGGTAGTATATTAGTCTGGAAAGCTACAGACTCGGAGTCTGATCCATTCA 1490
Query 1408 AGTACTTGACATCTCTAGAGGGACATCATAGTGGTGACGTCACTTGTTTTGTTGTTGGTG 1467
| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1491 AATACTTGACATCTCTCGAGGGACATCATAGTGGTGAAGTCACTTGTTTTGTTGTTGGAG 1550
Query 1468 GTCAACTGCTATACTCTGGTTCTGTCGATAGAACAATAAAGGTGTGGGATCTCAACACCC 1527
|| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1551 GTGAAGTGCTATACTCTGGTTCTGTCGATAAAACAATAAAGGTGTGGGATCTCAACACCT 1610
Query 1528 TGCAGTGTATAATGACCCTGAAGCAACATACCGGCACTGTCACATCACTCTTATGTTGGG 1587
|||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 1611 TGCAATGTAGAATGACCCTGAAGCAACATATCGGCACTGTCACTTCACTCTTATGTTGGG 1670
Query 1588 ACAAGTGTCTGATATCATCTTCCTTGGATGGGACCATAAAAGTTTGGGCTTGTTCTGAAA 1647
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1671 ACAAGTGTCTGATATCGTCTTCCTTGGATGGGACCATAAAACTTTGGGCTTGTTCTGAAA 1730
Query 1648 ATGGAAGCTTGAAAGTTGTTCAAACTCGCAAACAAGAACAGAGTGTTCATGCTCTTTGTG 1707
||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||
Sbjct 1731 ATGAAAGTTTGAAAGTTGTTCAAACTCGCAAACAAGAACTGAGTGTTCATACTCTCTGTG 1790
Query 1708 GGATGCATGATGCAGAGGCCAAACCGATCATATTCTGCTCTTACCAAAATGGAACAGTTG 1767
| ||||| ||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct 1791 GAATGCACGATGCAGAGGCCAAACCGATCATGTTTTGCTCTTACCAAAATGGAGCAGTTG 1850
Query 1768 GCATTTTCGATCTACCATCTTTTGAAGAAAGAGGAAAAATGTTCTCTACGCAGACGATCG 1827
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1851 GCATTTTCGACCTACCATCTTTTGAAGAAAGAGGAAAGATGTTCTCTACGCAGACGATCT 1910
Query 1828 GCACACTCACAATTGGTCCTGAAGGATTGTTATTCAGTGGAGACAAGAGTGGGAACTTGC 1887
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1911 GCACACTTACAATTGGTCCTGGAGGATTGTTATTCAGTGGAGACAAGAGTGGGAACTTGC 1970
Query 1888 GTGTATGGAGCTTAGCTGCTGGCAACAAAGTTTAGTCGTTT 1928
||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1971 GTGTATGGAGCTTAGCTTCTGGCACCAAAGTTTAGTCGTTT 2011
> AT5G49200.1 | Symbols: | WD-40 repeat family protein / zfwd4
protein (ZFWD4) | chr5:19947796-19949055 REVERSE LENGTH=1260
Length=1260
Score = 1399 bits (757), Expect = 0.0
Identities = 911/984 (93%), Gaps = 15/984 (2%)
Strand=Plus/Plus
Query 951 GTATGTAAGTATTGGAAAGCTGGAAACTGCAAAAGGGGTGAGCAGTGCCAGTTCTTACAC 1010
||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||
Sbjct 280 GTATGTAAGTATTGGAAAGATGGAAAGTGCAAGAGGGGTGAGCAGTGCCAGTTCTTACAC 339
Query 1011 TCTTGGTCTTGTTTCCCTGGATTGGCCATGGTAGCTGCTCTTGAAGGACACAAGAAGGAT 1070
|||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct 340 TCTTGGTCTTGTTTCCCTGGATTGGCCATGGTAGCTTCTCTTGAAGGGCACAATAAGGAA 399
Query 1071 CTAAAGGGGATCGCGCTCCCTCAGGGTTCAGATAAACTCTTTTCAGTCAGTAGTGATGGT 1130
|||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 400 CTAAAGGGGATCGCTCTCCCTGAGGGTTCAGATAAACTCTTTTCAGTCAGTATTGATGGT 459
Query 1131 ACATTGCGAATTTGGGACTGCAATTCTGGTCAGTGTGTACATTCCATCAACCTCCAGGCA 1190
||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 460 ACATTGCGAGTTTGGGACTGCAATTCTGGTCAGTGTGTACATTCCATCAACCTTGACGCA 519
Query 1191 GAAGCAGGGTCTCTAATCAGTGAAGGCCCATGGGTTTTCCTTGGCTTGCCAAATGCTGTA 1250
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct 520 GAAGCAGGGTCTCTAATCAGTGAAGGCCCTTGGGTTTTCCTTGGCTTGCCAAACGCTATA 579
Query 1251 AAGGCTTTTAATGTTCAAACCAGTAAAGATTTGCATCTT---G-A--AGGGGTGGTTGGT 1304
||||||||||| |||||||||||| |||||||||||||| | | |||||||||||||
Sbjct 580 AAGGCTTTTAACGTTCAAACCAGTCAAGATTTGCATCTTCAAGCAGCAGGGGTGGTTGGT 639
Query 1305 CAGGTGCATGCAATGACTGTTGCAAACGGAATGCTTTTTGCTGGAACAAGTTCTGGTAGT 1364
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 640 CAGGTGAATGCAATGACTATTGCAAACGGAATGCTTTTTGCTGGAACAAGTTCTGGTAGT 699
Query 1365 ATATTGGTCTGGAAAGCTAC-A--GACTCTGAGTCTGATCCATTCAAGTACTTGACATCT 1421
|| || |||||||||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct 700 ATCTTAGTCTGGAAAGCTACTACAGACTCTGAGTCTGATCCATTCAAATACTTGACATCT 759
Query 1422 CTAGAGGGACATCATAGTGGTGACGTCACTTGTTTTGTTGTTGGTGGTCAACTGCTATAC 1481
|| ||||||||| | ||||||| ||||||||||||| |||||| |||||| ||||||||
Sbjct 760 CTTGAGGGACAT-A--GTGGTGAAGTCACTTGTTTTGCTGTTGGAGGTCAAATGCTATAC 816
Query 1482 TCTGGTTCTGTCGATAGAACAATAAAGGTGTGGGATCTCAACACCCTGCAGTGTATAATG 1541
|||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||
Sbjct 817 TCTGGTTCTGTCGATAAAACAATCAAGATGTGGGATCTCAACACCCTGCAATGTATAATG 876
Query 1542 ACCCTGAAGCAACATACCGGCACTGTCACATCACTCTTATGTTGGGACAAGTGTCTGATA 1601
||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||
Sbjct 877 ACCCTGAAGCAACATACCGGCACTGTCACTTCACTCTTATGTTGGGATAAATGTTTGATA 936
Query 1602 TCATCTTCCTTGGATGGGACCATAAAAGTTTGGGCTTGTTCTGAAAATGGAAGCTTGAAA 1661
|| |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||
Sbjct 937 TCGTCTTCCTTGGATGGGACCATAAAAGTTTGGGCTTATTCTGAAAACGGAATCTTGAAA 996
Query 1662 GTTGTTCAAACTCGCAAACAAGAACAGAGT-GT-T-CATGCTCTTTGTGGGATGCATGAT 1718
|||||||||||||||| ||||||||||||| || | |||||||||| ||| |||||||||
Sbjct 997 GTTGTTCAAACTCGCAGACAAGAACAGAGTAGTGTTCATGCTCTTTCTGGTATGCATGAT 1056
Query 1719 GCAGAGGCCAAACCGATCATATTCTGCTCTTACCAAAATGGAACAGTTGGCATTTTCGAT 1778
||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1057 GCAGAAGCCAAACCGATAATATTCTGCTCTTACCAAAACGGAACCGTTGGCATTTTCGAC 1116
Query 1779 CTACCATCTTTTGAAGAAAGAGGAAAAATGTTCTCTACGCAGACGATCGGCACACTCACA 1838
|||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||
Sbjct 1117 CTACCATCTTTTCAAGAAAGAGGAAGGATGTTCTCTACGCACACGATCGCCACACTCACA 1176
Query 1839 ATTGGTCCTGAAGGATTGTTATTCAGTGGAGACAAGAGTGGGAACTTGCGTGTATGGAGC 1898
||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| |
Sbjct 1177 ATTGGTCCTCAAGGATTGTTATTCAGTGGAGACGAGAGTGGTAACTTGCGTGTATGGACC 1236
Query 1899 TTAGCTGCTGGCAACAAAGTTTAG 1922
||||||||||||||||||||||||
Sbjct 1237 TTAGCTGCTGGCAACAAAGTTTAG 1260
Score = 100 bits (54), Expect = 4e-20
Identities = 190/249 (76%), Gaps = 35/249 (14%)
Strand=Plus/Plus
Query 591 ATGGATTACAAGGCGCCAAGGAGGTACTCAAACGGAAGGAATTTCGGAGTTGCTAGACAG 650
||||||||||| ||||||||||| |||| | | | || | || ||||| ||||||
Sbjct 1 ATGGATTACAAAGCGCCAAGGAGATACT-ACTCACACGG-AGTT----GTTGCGAGACAG 54
Query 651 CAAGATTTCGCAGCAGATATAGTTAC--G-AGAAGACCTTATGCCCCGTATAACAATGGA 707
|||||||||||| ||||||||||||| | ||||||||||||| ||| | | ||
Sbjct 55 CAAGATTTCGCAACAGATATAGTTACGAGAAGAAGACCTTATGTCCC-T-T-AC------ 105
Query 708 ATGAAGAAAGGTCCAAATAA-TTTGTCAAGGAATCTGGTTTGGACGTCAAAAGAGTACAA 766
| | |||||||||| ||| ||||||| |||||||||||||||||||||||||||
Sbjct 106 -----G-ACCGTCCAAATAAGTTT-TCAAGGAGTCTGGTTTGGACGTCAAAAGAGTACAA 158
Query 767 AGCACCAGATGGCGATAG---GCCACGGAAGAATGCAGCCAATGGGTCAACGAAACCACC 823
| |||| || ||| ||| |||| ||| |||| | || |||| ||||||||||
Sbjct 159 ATCACCCGAGGGCAATAATATGCCAAGGACCAATG-A-----TGTGTCACCGAAACCACC 212
Query 824 AGTTTTAGG 832
|||||||||
Sbjct 213 AGTTTTAGG 221
> AT2G15271.1 | Symbols: | Pseudogene of AT5G49200; WD-40 repeat
family protein / zfwd4 protein (ZFWD4) | chr2:6639457-6639868
REVERSE LENGTH=412
Length=412
Score = 344 bits (186), Expect = 2e-93
Identities = 272/310 (88%), Gaps = 20/310 (6%)
Strand=Plus/Plus
Query 1328 AAACGGAATGCTTTTTGCTGGAACAAGTTCTGGTAGTATATTGGTCTGGAAAGCTAC-AG 1386
||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |
Sbjct 6 AAACGGAATGCTTTTTGCTGGAACAAGTTGTGGTAGTAGCTTAGTCTGGAAAGCTACTAC 65
Query 1387 AC--TCTGAGTCTGAT---CCATTCAAGTACTTGACATCTCTAGAGGGACATCATAGTGG 1441
|| |||||||||||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct 66 ACACTCTGAGTCTGATGATCCATTCAAATACTTGACATCTCTCGAGGGACATCATAGTGG 125
Query 1442 TGACGTCACTTGTTTTGT--TGTTG--GT-GG---TCAACTGCTATACTCTGGTTCTGTC 1493
||| |||||||||||||| | ||| || || |||| |||||||||||| | | |
Sbjct 126 TGAAGTCACTTGTTTTGTACTTTTGTTGTTGGAGGTCAAGTGCTATACTCTG-T-C-G-- 180
Query 1494 GATAGAACAATAAAGGTGTGGGATCTCAACACCCTGCAGTGTATAATGACCCTGAAGCAA 1553
||| |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 181 -ATAAAACAATCAAGGTGTGGGATCTCAACACCCTGCAATGTATAATGACCTTGAAGCAA 239
Query 1554 CATACCGGCACTGTCACATCACTCTTATGTTGGGACAAGTGTCTGATATCATCTTCCTTG 1613
||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 240 CATACTGGCACTGTAACATCACTCTTATGTTGGGACAAATGTCTGATATCGTCTTCCTTG 299
Query 1614 GATGGGACCA 1623
||||||||||
Sbjct 300 GATGGGACCA 309
Score = 156 bits (84), Expect = 9e-37
Identities = 96/102 (94%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1821 ACGATCGGCACACTCACAATTGGTCCTGAAGGATTGTTATTCAGTGGAGACAAGAGTGGG 1880
||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||
Sbjct 311 ACGATTGGCACACTCACAATTGGTCCTCAAGGATTGCTATTCAGTGGACACAAAAGTGGG 370
Query 1881 AACTTGCGTGTATGGAGCTTAGCTGCTGGCAACAAAGTTTAG 1922
||||||||||||||||||||||||||||||| ||||||||||
Sbjct 371 AACTTGCGTGTATGGAGCTTAGCTGCTGGCACCAAAGTTTAG 412
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95481436590
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5