BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493945 Length=824 Score E Sequences producing significant alignments: (Bits) Value AT5G40420.1 | Symbols: OLEO2, OLE2 | oleosin 2 | chr5:16173393-... 1249 0.0 > AT5G40420.1 | Symbols: OLEO2, OLE2 | oleosin 2 | chr5:16173393-16174783 REVERSE LENGTH=872 Length=872 Score = 1249 bits (676), Expect = 0.0 Identities = 776/825 (94%), Gaps = 3/825 (0%) Strand=Plus/Plus Query 1 AAAAC-ATTTCCTCATTATCTTACAATGGCGGATACACATCGTGTCGACCGTACTGAAAG 59 ||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct 20 AAAACAATTT-CTCATTAGCTTACAATGGCGGATACACACCGTGTCGACCGTACTGATAG 78 Query 60 GCACTTGCAATTTCAGTCGCCGTATGAAGGCGGCCGAGTTCATCTTCAGTATGAAGGTGG 119 ||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||| Sbjct 79 ACACTTTCAATTTCAGTCGCCCTATGAAGGCGGCCGAGGTCAAGGTCAGTATGAAGGTGA 138 Query 120 CGGCGGTTACGGTGGCGGCGGTTACAAGAGCATGATGCCTGAAAGTGGCCCATCTAGCAC 179 | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 139 CCGTGGTTACGGTGGTGGCGGTTACAAGAGCATGATGCCTGAAAGTGGCCCATCTAGTAC 198 Query 180 CCAAGTATTGTCCCTTTTGATTGGCGTCCCTGTCGTTGGTTCGCTACTTGCCTTGGCCGG 239 ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || Sbjct 199 CCAAGTATTGTCCCTGTTGATTGGAGTCCCTGTCGTCGGTTCGCTACTTGCCTTGGCTGG 258 Query 240 TTTACTTCTAGCTGGTTCGGTGATCGGCTTAATGGTCGCTTTACCGTTGTTCCTCCTCTT 299 ||||||||||||||||||||||||||||||||||| |||||||| | || |||||||| Sbjct 259 ATTACTTCTAGCTGGTTCGGTGATCGGCTTAATGGTTGCTTTACCACTATTTCTCCTCTT 318 Query 300 TAGCCCGGTTATAGTCCCAGCGGCTCTAACCATCGGGCTTGCAATGACGGGCTTTTTAGC 359 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 319 CAGCCCGGTTATAGTCCCAGCGGCTCTAACTATCGGGCTTGCAATGACAGGCTTTTTAGC 378 Query 360 CTCGGGAATGTTTGGTCTAACCGGGCTAAGCTCAATCTCATGGGTCATGAACTATCTTCG 419 |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 379 CTCGGGGATGTTCGGTCTAACCGGGCTTAGCTCAATCTCATGGGTCATGAACTATCTTCG 438 Query 420 TGGGACAAGGAGGACAGTGCCTGAGCAATTGGAGTATGCTAAGAGGAGAATGGCTGATGC 479 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 TGGGACAAGGAGAACTGTGCCTGAGCAATTGGAGTATGCTAAGAGGAGAATGGCTGATGC 498 Query 480 GGTTGGCTACGCTGGGCAAAAGGGCAAAGAAATGGGCCAGCATGTGCAGAACAAGGCCCA 539 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 499 GGTTGGCTACGCAGGACAAAAGGGCAAAGAAATGGGCCAGCATGTGCAGAACAAGGCCCA 558 Query 540 AGATGTTAAACAGTATGATATTTCTAAGTCACATGACACTACCACTAAGGGTCATGAGAC 599 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 559 AGATGTTAAACAATATGATATTTCTAAGCCACATGACACTACCACTAAGGGTCATGAGAC 618 Query 600 TCAGGGGAGGACGACGGCTGCATGATGAGTTTTCGGTATGAACGGTAGATATGTGTTTTC 659 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 619 TCAGGGGAGGACGACGGCTGCATGATGAGTTTTCAGTATGAACGGTAGATATGTGTTTTC 678 Query 660 AATATGATGTCCTTTTCTCTGCATTTTCAATATGatgttatgtgttttttttgtttggct 719 | ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 679 ACTATTATGTCGTTTTTTCTGCATTTTCAATATGATGTTATGTGTTTTTTTTGTTTGGCT 738 Query 720 ttttgttgaaccatgttatgtgttttgtgtttttgtAAGCATGAAAGATCGCAAGTGTTG 779 |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 739 TTTTGTTGAACCGTGT-ATGTGTTTTATGTTTTTGTAAGCATGAAAGATCGCAAGTGTTG 797 Query 780 TGGTAATATTTGAGTGTTATAATATGATAAGTTGATAAATCATGG 824 ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 798 TGGTAATATTTGAATGTAATAATATGATAAGTTGATAAATCATGG 842 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40137083453 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5