BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494041 Length=1969 Score E Sequences producing significant alignments: (Bits) Value AT5G39450.1 | Symbols: | F-box family protein | chr5:15785717-... 2848 0.0 AT5G39460.1 | Symbols: | F-box family protein | chr5:15788289-... 776 0.0 AT5G39480.1 | Symbols: | F-box family protein | chr5:15801635-... 632 3e-180 AT5G39490.1 | Symbols: | F-box family protein | chr5:15805808-... 590 2e-167 > AT5G39450.1 | Symbols: | F-box family protein | chr5:15785717-15787946 FORWARD LENGTH=2137 Length=2137 Score = 2848 bits (1542), Expect = 0.0 Identities = 1851/1997 (93%), Gaps = 33/1997 (2%) Strand=Plus/Plus Query 1 TCTCTCTCACATCGTCTTCTTAGTTAGTGATTTCCTCATTTTTCTTCCACAATTTAATTC 60 |||||||| |||||||||||||||||| |||||||||||||||||| ||||| | |||| Sbjct 143 TCTCTCTCGCATCGTCTTCTTAGTTAGCGATTTCCTCATTTTTCTTATACAATCTGATTC 202 Query 61 GGATCGAGTTCTACTTTGATGGGTAATTGAAAAGTTTGATTCTTGTTCACGT-TAAAGCG 119 |||||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||| Sbjct 203 GGATCGAGTTCTTCTTTGATGGGTAATTGAAAAGTTTGAATCTTGTTTACGTAAAAAGCG 262 Query 120 ATCTGATTCAAA-C----C------------C----CCCAAAGCTGCG-TTTTTGATCTT 157 |||||||||||| | | | |||||||||||| ||||||||||| Sbjct 263 ATCTGATTCAAACCAAAACTGATATTTTTGACGAATCCCAAAGCTGCGTTTTTTGATCTT 322 Query 158 CATAGTATGAATCAGATGAGGAAGAACGACGATTTAGGTTCGGAATCATTTGGTGCTTGC 217 || |||||||||||||||| | ||||| ||||||||| || |||||||||||| ||||| Sbjct 323 CAAAGTATGAATCAGATGA-G--GAACGGCGATTTAGGGTCAGAATCATTTGGTACTTGC 379 Query 218 TTGCTTCTGTCTCTTCCAGAAGATGTAATTGCTGTTATAGCTCGTTTTGTATCTCCAAGA 277 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 380 TTGCTTCTGTCTCTTCCAGAAGATGTTATTGCTGTTATAGCACGTTTTGTATCTCCAAGA 439 Query 278 GACATTTGCAATCTAAGCTTATGCTGCAAAAGTCTCTGTGAGGTTTTTGATTCAGAAAGG 337 |||||||||||||| |||||||||||||||||||| ||||| ||| | |||||||||||| Sbjct 440 GACATTTGCAATCTGAGCTTATGCTGCAAAAGTCTATGTGACGTTGTGGATTCAGAAAGG 499 Query 338 ATCTGGCTTGTGCAATGTGAAGTAGTAAAGGTTCTTTCTTTATCTGAAATGATCCAATGG 397 |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 500 ATCTGGCTTGTGCAGTGTGAAGTAGTAAAGGTTCTTCCTTTATCTGAAATAATCCAATGG 559 Query 398 CGAATCGGAATCTCTTCTTATAAGGCGTTTTGTCGGTTTCTTGGAGAGGTAATGAAGCCT 457 ||||| || || ||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 560 CGAATTGGGATTTCTTCTTATAAGGCGCTTTGTTGGTTTCTTGGAGAGGTAATGAAGCCT 619 Query 458 CTTGTTGGGGTTTGGGTTCACCAAAACCCTGAACTTGGGAATGTTGTTTATGTAATGCCT 517 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 620 CTTGTTGGTGTTTGGGTTCATCAAAACCCTGAACTTGGGAATGTTGTTTATGTCATGCCT 679 Query 518 GGTTTTTTATCCGTTGTTGGGTGTCGGATAATTCCACAAGAGGTTGGTCCTTTAGGGATT 577 ||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 680 GGTTTCTTGTCTGTTGTTGGGTGTCGGATAATTCCACAAGAGGTTGGTCCTTTGGGGATT 739 Query 578 GAGGAGGCTCGAGTTATGTGGTCACCTGTGTTTGAGATAATCTGCGGTTTTGATGGCTCT 637 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 740 GAGGAGGCTCGAGTTATGTGGTCACCTGTGTTTGAGATTATCTGTGGTTTTGATGGCTCC 799 Query 638 GCCAAGTTTTTCCTCCATGGAAGAGACGGAAAACTGCATTGCTGCCTGCATCCTGGTTTT 697 |||||||||||||||||||| ||||| |||||| |||| ||||| ||||| |||||||| Sbjct 800 GCCAAGTTTTTCCTCCATGGGAGAGATGGAAAAGTGCAATGCTGTCTGCACCCTGGTTTC 859 Query 698 GTTATGGGCATTGAGAAGAGTTGTAATGTGCTTTTACTCGAGGTTGAGACGAGGCGAGAG 757 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 860 GTTAGGGGCATTGAGAAGAGTTGTAATGTGCTTCTACTTGAGGTTGAGACGAGGCGAGAG 919 Query 758 AAGGAGTTGTGCAGTGAGA-T--TGAGACTGTGTTGTTGGGAGAGACAGGGGTTCAGTTA 814 ||| ||||||||| ||||| | ||||||||||||||||| |||||| |||||||||||| Sbjct 920 AAGAAGTTGTGCAATGAGATTGATGAGACTGTGTTGTTGGTAGAGACGGGGGTTCAGTTA 979 Query 815 CCATTTCGCAAACTACCCTTTAGTTATAGAAGGAATTTACTTCACATAGTGACAAGCACT 874 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 980 CCATTTCGCAAACTACCATTTAGTTATAGAAGGAATTTACTTCACATAGTGACAAGCACT 1039 Query 875 GTTGGTATACCTGTACCTGATCTATCAAGTGAAAGGTTATTTCCCACTTCGAAAGATGAT 934 |||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||| Sbjct 1040 GTTGGTATACCTGTACCTGATCTATCAAGTGAAAAGTTATTTCCTACGTCAAAAGATGAT 1099 Query 935 GAAGCGGTGTTGTCT-GAACGCAGAACCATGCTCCTTAAAATGCATAAGTTTGGTGTTGA 993 ||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct 1100 GAAGCGGTGTTGT-TGGAACGCAGAACCATGCTTCTTAAAATGCACAAGTTTGGTGGTGA 1158 Query 994 TTGGAATCACATGAACCTGGAGGATGAGTGTATAAATATTCCAAATCAGGTAGACATAAA 1053 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 1159 TTGGAATCACATGAACCTGGAGGATGAGTGCACAAATATTCCAAATCAGGTAGACATAAA 1218 Query 1054 CGAATCGTGGAAGCATCTTGGATTTGAAGTCGATAATCGGAACATGGACGCTGGGAATCA 1113 | |||||||||||||||| || ||||||| ||||| ||| ||||||||||||| |||||| Sbjct 1219 CAAATCGTGGAAGCATCTAGGTTTTGAAGGCGATATTCGCAACATGGACGCTGAGAATCA 1278 Query 1114 GACACAAAGGAAGAGCTTTAGTAGGTATTTCAGAAGTGGCATAAAGCATATTCTTGGGAG 1173 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1279 GACACAAAGGAAGAGCTTTAGTAGGTATTTCAGAAGTGGCATAAAGCATATTCTCGGGAG 1338 Query 1174 GTCTAGTTCTTTAAAGAACACGTCTTCTTCAAGAAGTGAGACTAGACCTTGGAATCTCCA 1233 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1339 GTCTAGTTCTTCAAAGAACATGTCTTCTTCAAGAAGTGAGACTAGACCTTTGAATCTCCA 1398 Query 1234 AAAATTTCTTAATTTTGGTGATTCCATAGGTCTTAGTCTCAAAGCTTCCAAGATTAAGCT 1293 ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct 1399 AAAGTTTCTTAATTTTGGTGATTCAATAGGTCTTAGTCTCAAAGCTTCCAATATTAAGTT 1458 Query 1294 GTCTTCTTATCAAGGTTGGCCAAACATGGACGAAACCCGTTATGCCCTTTATAAGCTACC 1353 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1459 GTCTTCTTACCAAGGTTGGCCAAACATGGACGAAACCCGTTATGCCCTTTATAAGCTACC 1518 Query 1354 GATTAAGAATCCCATCGCTAACGAAGAGTATGCCGGCTTGTGGGGAGGAACTTTTGGCTG 1413 ||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 1519 GATTAAGGATCCCATCGCTAACGATGAGTATGCCGGGTTATGGGGAGGAACTTTTGGCTG 1578 Query 1414 GCCACCAGGAAAATGTACAGAAGATAAACCCGGGAAGGCTCtttttt-tACTGATGCTCT 1472 |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| Sbjct 1579 GCCACCAGGAAAATGTACAGAAGATAAACCAGGGAAGGCT-TTTTTTCTACTGATGCTCT 1637 Query 1473 CTTATGAAGAATCTCAAGATGGTACTGAAAGACTTCTTATAGGGACGAAAATACTCGAAG 1532 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 1638 CTTATGAAGAATCTCAAGATGGTACTGAGAGACTTCTTATAGGGACAAAAATACTCGAAG 1697 Query 1533 GAACTCACTACGGGATGCATCCTAATGGATCTGCAATGTTTGTTATAAAGATTGATTCAC 1592 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 1698 GAACTCACTACGGGATGCATCCTAATGGATCTGCAATGTTTGTTATAAAAATTGATTCGC 1757 Query 1593 CTTCCTTTGAGCTTTTTCCTTTCGATACAAATGGAGAAGATTTTGAGCATTCTTACGCAG 1652 | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1758 CATCCTTTGAGGGTTTTCCTTTCGACACAAATGGAGAAGATTTTGAGCATTCTTACGCAG 1817 Query 1653 GAGAAGGTACTGCAAAGGGTTATGGTTTCCGGTATCCTGGTTACAAACCGGGTACACTTT 1712 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1818 GAGAAGGTACTGCAAAGGGTTATGGTTTCCGGTATCCTGGTTACAAACCTGGTACACTTT 1877 Query 1713 TCGTAACATCTAAAGGTCTTCTCATGTTTGTTTGGAAAGCAACTAAAGTTGTGTTGACAT 1772 |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 1878 TCGTGACATCTAAAGGTCTTCTCATGTTCATTTGGAAAGCAACTAAAGCTGTGTTGACAT 1937 Query 1773 TACAAAGACTTGACCTTGGAGAGCTCTTAAGGAAAGGCGTGTGTGTATCGCCTTTACCTC 1832 | ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 1938 TGCAAAGACTTAACCTTGGAGAGCTCTTAAGGAAAGGTGTATGTGTATCGCCTTTACCTC 1997 Query 1833 CATGTTTGAATTTTGCTTATTTGACAAAATCTCACACCAATGTGTTTGCCCCTGAACGAA 1892 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1998 CATGTTTGAATTTTGCTTATTTGATAAAATGTCACACCAATGTGTTTGCCCCTGAACGAA 2057 Query 1893 GAAGATCGTAGGAGATTCCTGCAACAGATTCGAAGCTCACAAGTCCTCTCTGTTTCCAAT 1952 ||||||| ||||||||| |||||||| ||| ||| |||||||||| ||||| |||||||| Sbjct 2058 GAAGATCATAGGAGATTGCTGCAACAAATTTGAAACTCACAAGTCTTCTCTATTTCCAAT 2117 Query 1953 ATAATAATCTCATTATC 1969 |||||| ||||||||| Sbjct 2118 ATAATAGGCTCATTATC 2134 > AT5G39460.1 | Symbols: | F-box family protein | chr5:15788289-15790004 REVERSE LENGTH=1716 Length=1716 Score = 776 bits (420), Expect = 0.0 Identities = 1278/1670 (77%), Gaps = 147/1670 (9%) Strand=Plus/Plus Query 199 GGAATCATTTGGTGCTTGCTTGCTTCTGT-CTCTTCCAGAAGATGTAATTGCTGTTATAG 257 |||||| ||||| |||||||||||||| | | ||||| |||||||| |||||||||| Sbjct 12 GGAATCGTTTGGAGCTTGCTTGCTTCT-TACGCTTCCCGAAGATGTGTTTGCTGTTATCT 70 Query 258 CTCGTTTTGTATCTCCAAGAGACATTTGCAATCTAAGCTTATGCTGCAAAAGTCTCTGTG 317 |||||||| | |||||||| |||||||||||||||| ||| ||| |||||||||| |||| Sbjct 71 CTCGTTTTCTTTCTCCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAAAGTCTTTGTG 130 Query 318 AGGTTTTTGATTCAGA-AAGGATC-TGGCTTGTGCAATGTGAAGTAGTAAAGGTTCTTTC 375 || | ||||| || || || | ||||||||||||||||||| |||||| |||||| | Sbjct 131 CCCTTGTCGATTCCGAGAA-GA-CGTGGCTTGTGCAATGTGAAGAAGTAAAAGTTCTTCC 188 Query 376 TTT-ATCTGAAATGA-TCCAATGGCGAATCGGAATCTCTTCTTATAAGGCGTTTTGTCGG 433 ||| || |||| | | |||||||||||||||| ||||||||||| ||||| ||||| || Sbjct 189 TTTGAT-TGAACT-AGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCCCTTTGTAGG 246 Query 434 TTTCTTG-GAGAGGTAATGAAGCCTCTTGTTGGGGTTTGGGTTCACCAAAACCCTGAACT 492 ||||||| | ||||| ||||||| ||| ||||| ||||||| || ||||||||||||| Sbjct 247 TTTCTTGTG-GAGGTGGTGAAGCCGCTTCTTGGGATTTGGGTGCAAGAAAACCCTGAACT 305 Query 493 TGGGAATGTTGTTTATGTAATGCCTGGTTTTTTATCCGTTGTTGGGTGTCGGATAATTCC 552 |||||||||||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct 306 TGGGAATGTTGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATTCC 365 Query 553 ACAAGAGGTTGGTCCTTTAG-GGATTGAGGAGG-CTCGAGTTATGTGGTCACCTGTGTTT 610 |||| |||||| |||||| | ||||| | |||| | | ||| | ||||||||| |||||| Sbjct 366 ACAAAAGGTTGCTCCTTT-GTGGATTCAAGAGGGC-CAAGTCAAGTGGTCACCGGTGTTT 423 Query 611 GAGATAATCTGCGGTTTTGATGGCTCTGCCAAG--TTTTT-CCTCCATGGAAGAGACGGA 667 |||||||| ||||| |||||||||||| ||| ||||| |||||||||||||||| | Sbjct 424 GAGATAATTTGCGGCTTTGATGGCTCT---AAGGGTTTTTTCCTCCATGGAAGAGACA-A 479 Query 668 A-AACTGCA-TTGCTGCCTGCATCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGTAATG 725 | || | | || || | | |||||||| ||||||| ||| ||||||||||| |||| Sbjct 480 ACAAG-GTAGTTTCTTA-TAC--CCTGGTTTCGTTATGGACATCGAGAAGAGTTGCAATG 535 Query 726 TGCTTTTACTCGAGGTTGAGACGAGG-CGAGAGAAGGAGTT-GTGCAGTGAGATTGAGAC 783 ||||| ||||||| |||||| ||||| | ||||||| |||| ||||| ||||||||||| Sbjct 536 TGCTTCTACTCGAAGTTGAGCCGAGGTC-AGAGAAG-AGTTCGTGCAATGAGATTGAGA- 592 Query 784 TGTGTTGTTGGGAGAGACAGGGGTTCAGTTACCATTTCGCAAA-CTACCCTTTAGTTATA 842 | | | || ||||| | | |||||| | | | ||| ||| ||| ||| Sbjct 593 -GAG--------A-AGT-AGGGG---A-T--CCATTTGG-AGATCTAGACTTCAGTGATA 634 Query 843 GAAGGAATTTACTTCACATAGTGACAAG-CACTGTTGGTATACCTGTACC-TGATCTATC 900 ||| ||| ||||| | |||||||||| || ||| || ||| || | ||| | || Sbjct 635 GAATGAACTTACTAGATATAGTGACAAAACA-TGTAAGTCTACGAGT-CGATGAACCATT 692 Query 901 AAGTG-AAAGGTTATTTCCCACT---TCGAAAGATGATGAAGCGGTGTTGTCTG-AACGC 955 || | ||| ||||||||||| || ||| |||| |||||| || ||| || ||||| Sbjct 693 AACAGGAAAT-TTATTTCCCACCAGGTCAAAATATGACGAAGCGATGATGT-TGGAACGC 750 Query 956 AGAACCATGCTCCTTAAAATGCAT-AAGTTTGGTGTTGATTGGAATCACATGAACCTGGA 1014 |||| ||||||||||||||||| | || ||||||| | ||||| ||||| ||| |||| Sbjct 751 AGAAACATGCTCCTTAAAATGC-TCAAATTTGGTGGAAACTGGAAGCACATAAACTTGGA 809 Query 1015 GGATGA-GTGTA-TAAATATTCCAA--ATC-AG-G-TAGACATAAACGAATCGT-GGAAG 1066 ||| || | | | | | || ||| || || | |||||||||| ||| || |||| Sbjct 810 GGAGGATGAGCAGTTG-TGTTACAATCATATAGAGATAGACATAAAAAAATTGTTGGAAA 868 Query 1067 CATCTTGGATT-TGA-AGTCGATAA--TCGGA--ACATGGACGCTGGGA-ATCAG---AC 1116 ||||||| | ||| | | || || | ||| | || || | | || | || || Sbjct 869 -ATCTTGG-TGATGACATT-GACAACAT-GGAGGATATAGAGGATCAGATAG-AGGTTAC 923 Query 1117 ACAAAGGAAGA-G--CTTTAGTAGGTATTTCAGAAGTGGCAT-AAAGCATATTCTTGGGA 1172 || |||||||| | |||| | ||| ||| ||||||||||| ||| ||||||||||||| Sbjct 924 ACCAAGGAAGAAGAGCTTTCGCCGGTTTTTAAGAAGTGGCATTAAA-CATATTCTTGGGA 982 Query 1173 GGT-CTAGTTCTTTAAAGAACACGTCTTCTTCAAGAAGTGAGACTAGACCTTGGAATCTC 1231 || | ||||||| ||||| || || |||| || |||||||| |||| || ||||| | Sbjct 983 AGTTC-AGTTCTTCAAAGATCAATTCGCCTTCGAGCAGTGAGACAAGACGTTCGAATCGC 1041 Query 1232 CAAAAATTTCTTAATTTTGGTGATTCCATAG-GTCTTAGTCTCAAAGCTTCCAAG-A-TT 1288 |||| ||||| | | |||| || | || | |||||||| |||||||| | | | || Sbjct 1042 CAAAGCTTTCTCAGCTCTGGTAATAC-ATTTTGCCTTAGTCTTAAAGCTTC-ATGCACTT 1099 Query 1289 AAGCTGTCTTCTTATCAAGGTTGGCCAAACATG-GACGAA-ACC-CGTTATGCCCTTTAT 1345 | ||||||| ||| |||| ||||||| |||| | || | || | || | ||||| || Sbjct 1100 T-GATGTCTTCATATGAAGGGTGGCCAATCATGAG-CGCAGACAACTTT-T-CCCTTCAT 1155 Query 1346 AAGCTACCGATTAAGAATCC-CATCGCTAACGAAGAGTATGCCGGCTTGTGGGGAGGAAC 1404 || ||||| || ||||| || | ||| | |||| | |||||| || |||||||||||||| Sbjct 1156 AAACTACCAATGAAGAAACCTC-TCGATCACGACGTGTATGCGGGTTTGTGGGGAGGAAC 1214 Query 1405 TTTTGGCTGGCCACCAGGAAAATG-TACAGAAGATAAACCCGGGAAGGCTCtttttttAC 1463 ||||||||||| || || ||| | || |||||| | | | | ||| | ||| Sbjct 1215 GTTTGGCTGGCCCCCTGGGAAA-GATATTGAAGAT------G--A-GTCCCTTCTCTTAT 1264 Query 1464 TGATGCTCTCTTATGAAGAATCTCAAGATGGTACTGAAAGACTTCTTATAGGGACGAAAA 1523 | |||||| |||||| ||||||| |||| |||| ||| ||| ||||| | |||||||||| Sbjct 1265 TAATGCTCACTTATGGAGAATCTGAAGAGGGTAGTGAGAGAATTCTTTTCGGGACGAAAA 1324 Query 1524 TACTCGAAGGAACTCACTACGGGATGCATCCTAATGGATC-TGCAATGTTTGTTATAAAG 1582 ||||| | | | | | | | | ||||||||||||||| | ||||||||||| |||| Sbjct 1325 TACTC-A-GTTATTT--TGCTG-A-GCATCCTAATGGATCCT-CAATGTTTGTTGTAAAT 1377 Query 1583 ATTGATTCACCTTCCTTTGAGCTTTTTCC-TTTCGATACAAATGGA-GAAGATTTTGAGC 1640 ||||| | |||||| |||||| ||||| ||| |||||| ||||| || ||||| |||| Sbjct 1378 ATTGACACGCCTTCCCTTGAGCCGTTTCCATTT-GATACAGATGGAAGA-GATTTCGAGC 1435 Query 1641 ATTCTTACGCAGGAGAAGGTA-CTGCAAAGGGTTATGGTTTCCGGTATCCTGGTTACAAA 1699 |||||||| | ||||| |||| | || | |||||||| ||||| || || |||| |||| Sbjct 1436 ATTCTTACACGGGAGAGGGTATC-GCTGACGGTTATGGATTCCGATACCCCGGTT-CAAA 1493 Query 1700 -CCGGGTACACTTTTCGTAA-CATCTAAAGGTCTTCT--CATGTTTGTTTGGAAAGCAAC 1755 || ||| | |||||||||| | ||||| | |||||| ||| | |||||| ||| ||| Sbjct 1494 ACCTGGTTCCCTTTTCGTAAGC-TCTAATGATCTTCTTGCAT-TC-GTTTGGCAAGGAAC 1550 Query 1756 TAAAGTTGTG-TTGACATTACAAAGACTTGACCTTGGAGAGCTCTT-AAG 1803 | ||| |||| || ||||| |||||| | ||||||||||| |||| ||| Sbjct 1551 TGAAGATGTGATT-ACATTGCAAAGAATAAACCTTGGAGAGATCTTGAAG 1599 > AT5G39480.1 | Symbols: | F-box family protein | chr5:15801635-15803341 REVERSE LENGTH=1707 Length=1707 Score = 632 bits (342), Expect = 3e-180 Identities = 682/840 (81%), Gaps = 48/840 (6%) Strand=Plus/Plus Query 199 GGAATCATTTGGTGCTTGCTTGCTTCTGT-CTCTTCCAGAAGATGTAATTGCTGTTATAG 257 |||||| ||||| |||||||||||||| | | |||||||||||||| |||||||||| Sbjct 12 GGAATCGTTTGGAGCTTGCTTGCTTCT-TACGCTTCCAGAAGATGTGTTTGCTGTTATTT 70 Query 258 CTCGTTTTGTATCTCCAAGAGACATTTGCAATCTAAGCTTATGCTGCAAAAGTCT-CTGT 316 |||||||| | |||||||| || ||||||||||||| ||| ||| |||||||||| | | Sbjct 71 CTCGTTTTCTTTCTCCAAGCGATATTTGCAATCTAATCTTGTGCGGCAAAAGTCTGC-CT 129 Query 317 GAGGTTTTTGATTCAGA-AAGGATCTGGCTTGTGCAATGTGAAGTAGTAAAGGTTCTTTC 375 | || | ||| | || || ||| ||||||||||||||||||| ||||||||||||| | Sbjct 130 GCCCTTGTCGATACCGAGAA-GATGTGGCTTGTGCAATGTGAAGAAGTAAAGGTTCTTCC 188 Query 376 TTTATCT-GAAATGA-TCCAATGGCGAATCGGAATCTCTTCTTATAAGGCGTTTTGTCGG 433 ||| | | ||||| | |||||||||||||||| ||||||||||| ||||| ||||| || Sbjct 189 TTTGT-TGGAAAT-AGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCCCTTTGTAGG 246 Query 434 TTTCTTGGAGAGGTAATGAAGCCTCTTGTTGGGGTTTGGGTTCACCAAAACCCTGAACTT 493 ||||||| |||||| ||||||| ||| ||||| ||||||| || ||||||||||||||| Sbjct 247 TTTCTTGTAGAGGTGGTGAAGCCGCTTCTTGGGATTTGGGTGCAACAAAACCCTGAACTT 306 Query 494 GGGAATGTTGTTTATGTAATGCCTGGTTTTTTATCCGTTGTTGGGTGTCGGATAATTCCA 553 ||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||||| Sbjct 307 GGGAATGTTGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATTCCA 366 Query 554 CAAGAGGTTGGTCCTTTAG-GGATTGAGGAGG-CTCGAGTTATGTGGTCACCTGTGTTTG 611 ||| |||||| ||||| | ||||| | |||| | ||||||| ||||||||| ||||||| Sbjct 367 CAAAAGGTTGCTCCTTC-GTGGATTCAAGAGGAC-CGAGTTAAGTGGTCACCGGTGTTTG 424 Query 612 AGATAATCTGCGGTTTTGATGGCTCTGCCAAGTTTTTCCTCCATGGAAGAGACGGAA-AA 670 ||||||||||||| |||||||||||| | |||||||||||||||||||||| || || Sbjct 425 AGATAATCTGCGGGTTTGATGGCTCTAACGGGTTTTTCCTCCATGGAAGAGACA-AAGAA 483 Query 671 CTGCA-TTGCTGCCTGCATCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGTAATGTGCT 729 ||| ||||| || | |||||||||||||||||||||||||||||||| ||||| || Sbjct 484 G-GCAGTTGCT---TGTACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATGTACT 539 Query 730 TTTA-CTCGAGGTTGAGACGAGGCGAGAGAAGGAGTT-GTGCAGTGAGATTGAGACTGTG 787 | | ||||| |||| | |||||| ||||||| |||| ||||| ||||||||||| | | Sbjct 540 TC-AGCTCGATGTTGTGCCGAGGCAAGAGAAG-AGTTCGTGCAATGAGATTGAGAGAG-G 596 Query 788 TTGT-TGG-GAGAGACAGGG-GTTCAGTTACCATTTCGCAAACTACCCTTT-AGTTATAG 843 | | ||||| |||| | | || |||||| | | || | |||| ||| |||| Sbjct 597 A-GCCTCAAGAGAGG-AGGGAGAG-A-TT-CCATTTTGGATGCT-CGCTTTTAGTGATAG 650 Query 844 AAGGAATTTACTTCACATA--GTGACAAGC-ACTGTTGGTATACCTGTACCTG-ATCTAT 899 || ||||| || || ||| ||||||||| | ||| || ||| ||| || | | || Sbjct 651 AAAAAATTTGCT-CA-ATATTGTGACAAGCCA-TGTAAGTCTACATGTGG-TGGAACCAT 706 Query 900 CAAGTGAAAGGTTATTTCCCAC-TTCGAAAGATGATGAAGCGGTGTTG-TCTGAACGCAG 957 || ||||| |||||||||||| || |||| |||||||||| || || | ||||||||| Sbjct 707 TAAATGAAATGTTATTTCCCACATT-GAAATATGATGAAGCAATGCTGGT-TGAACGCAG 764 Query 958 AACCATGCTCCTTAAAATGCATAAGTTTGGTGTTGATTGGAATCACATGAACCTGGAGGA 1017 |||||| |||||||||||||| |||||||||| ||||||| ||||||| ||||||| Sbjct 765 AACCATTCTCCTTAAAATGCACAAGTTTGGTGGAAATTGGAAGAACATGAATTTGGAGGA 824 > AT5G39490.1 | Symbols: | F-box family protein | chr5:15805808-15807508 REVERSE LENGTH=1701 Length=1701 Score = 590 bits (319), Expect = 2e-167 Identities = 676/842 (80%), Gaps = 50/842 (6%) Strand=Plus/Plus Query 198 CGGAATCATTTGGTGCTTGCTTGCTTCTGTCT-CTTCCAGAAGATGTAATTGCTGTTATA 256 |||||| ||||||||||||||||||||| | | |||||||||||| | ||| |||||| Sbjct 8 CGGAATTATTTGGTGCTTGCTTGCTTCT-TATGCTTCCAGAAGATATCTTTGTTGTTATC 66 Query 257 GCTCGTTTTGTATCTCCAAGAGACATTTGCAATCTAAGCTTATGCTGCAAAAGTC-TCTG 315 |||||||| | |||||||| || |||||||| |||| ||| ||| ||||||||| || | Sbjct 67 TCTCGTTTTCTTTCTCCAAGCGATATTTGCAACCTAATCTTGTGCGGCAAAAGTCTTC-G 125 Query 316 TGAGGTTTTTGATTCAGA-AAGGATC-TGGCTTGTGCAATGTGAAGTAGTAAAGGTTCTT 373 || || | ||||| || || || | ||||||||||||||||||| ||||||||||||| Sbjct 126 TGCCCTTGTCGATTCCGAGAA-GA-CATGGCTTGTGCAATGTGAAGAAGTAAAGGTTCTT 183 Query 374 TCTTTATCT-GAAATGA-TCCAATGGCGAATCGGAATCTCTTCTTATAAGGCGTTTTGTC 431 |||| | | ||||| | |||||||||||||||| ||||||||||| ||||| ||||| Sbjct 184 CCTTTGT-TGGAAAT-AGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCCCTTTGTA 241 Query 432 GGTTTCTTGGAGAGGTAATGAAGCCTCTTGTTGGGGTTTGGGTTCACCAAAACCCTGAAC 491 ||||||||| |||||| ||||||| ||| ||||| ||||||| || ||||||||||||| Sbjct 242 GGTTTCTTGTAGAGGTGGTGAAGCCGCTTCTTGGGATTTGGGTGCAACAAAACCCTGAAC 301 Query 492 TTGGGAATGTTGTTTATGTAATGCCTGGTTTTTTATCCGTTGTTGGGTGTCGGATAATTC 551 ||||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||| Sbjct 302 TTGGGAATGTTGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATTC 361 Query 552 CACAAGAGGTTGGTCCTTTAG-GGATTGAGGAGG-CTCGAGTTATGTGGTCACCTGTGTT 609 ||||| |||||| ||||| | ||||| | |||| | ||||||| ||||||||| ||||| Sbjct 362 CACAAAAGGTTGCTCCTTC-GTGGATTCAAGAGGAC-CGAGTTAAGTGGTCACCGGTGTT 419 Query 610 TGAGATAATCTGCGGTTTTGATGGCTCTGCCAAGTTTTTCCTCCATGGAAGAGACGGAA- 668 ||||||||||||||| |||||||||||| | |||||||||||||||||||||| || Sbjct 420 TGAGATAATCTGCGGGTTTGATGGCTCTAACGGGTTTTTCCTCCATGGAAGAGACA-AAG 478 Query 669 AACTGCA-TTGCTGCCTGCATCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGTAATGTG 727 || ||| ||||| || | |||||||||||||||||||||||||||| ||| |||| Sbjct 479 AAG-GCAGTTGCT---TGTACCCTGGTTTTGTTATGGGCATTGAGAAGAATTGCGATGTA 534 Query 728 CTTTTA-CTCGAGGTTGAGACGAGGCGAGAGAAGGAGTT-GTGCAGTGAGATTGAGACTG 785 ||| | ||||| |||| | |||||| ||||||| |||| ||||| ||||||||||| | Sbjct 535 CTTC-AGCTCGAAGTTGTGCCGAGGCAAGAGAAG-AGTTCGTGCAATGAGATTGAGAGAG 592 Query 786 TGTTGT-TGGGAGAGACAGG-GGTTCAG-TTACCATTTCGCAAACTACCCTTT-AGTTAT 841 | | | ||| | ||| || || || |||||| | | || | |||| || || Sbjct 593 -GA-GCCTCA-AGA-A-AGGAGGGAGAGATT-CCATTTTGGATGCT-CGCTTTTAGCGAT 645 Query 842 AGAAGGA-ATTTACTTCACATAGTG--ACAAGC-ACTGTTGGTATACCTGTACCTG-ATC 896 |||| | | || || || ||| || |||| | | ||| ||| ||| ||| || | | Sbjct 646 AGAAA-ACACTTGCT-CA-ATATTGTCACAAACCA-TGTAGGTCTACATGTGG-TGGAAC 700 Query 897 TATCAAGTGAAAGGTTATTTCCCAC-TTCGAAAGATGATGAAGCGGTGTTGTCTGAACGC 955 || || ||||| |||||||||||| || |||||||||||||| | || ||||||| Sbjct 701 CATTAAATGAAATGTTATTTCCCACATT-GAAAGATGATGAAGTAAAGCTGAATGAACGC 759 Query 956 AGAACCATGCTCCTTAAAATGCATAAGTTTGGTGTTGATTGGAATCACATGAACCTGGAG 1015 |||||||| |||||||||||||| |||||||||| ||||||| ||||||| ||||| Sbjct 760 AGAACCATTCTCCTTAAAATGCACAAGTTTGGTGGAAATTGGAAGAACATGAATTTGGAG 819 Query 1016 GA 1017 || Sbjct 820 GA 821 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97539658935 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5