BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494078
Length=658
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39100.1 | Symbols: GLP6 | germin-like protein 6 | chr5:1565... 944 0.0
AT5G39150.1 | Symbols: | RmlC-like cupins superfamily protein ... 857 0.0
AT5G39180.1 | Symbols: | RmlC-like cupins superfamily protein ... 846 0.0
AT5G39120.1 | Symbols: | RmlC-like cupins superfamily protein ... 802 0.0
AT5G39110.1 | Symbols: | RmlC-like cupins superfamily protein ... 791 0.0
AT5G39160.1 | Symbols: | RmlC-like cupins superfamily protein ... 470 9e-132
AT5G39190.1 | Symbols: GLP2A, ATGER2, GER2 | germin-like protei... 470 9e-132
AT5G39130.1 | Symbols: | RmlC-like cupins superfamily protein ... 464 4e-130
> AT5G39100.1 | Symbols: GLP6 | germin-like protein 6 | chr5:15653090-15654020
REVERSE LENGTH=835
Length=835
Score = 944 bits (511), Expect = 0.0
Identities = 612/661 (93%), Gaps = 5/661 (1%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||| ||||||||||||||||| |||||||| ||||||||| | |||||||
Sbjct 177 TTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTCTTCT 236
Query 61 TCTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACGG 120
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
Sbjct 237 TCTCAGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGACAACAG 296
Query 121 TCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACT 180
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 297 TCAATGTCGACCAGATTCCAGGGTTAAACACTATGGGAATATCCTTGGTCCGCATAGACT 356
Query 181 ATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGTTC 240
|||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 357 ATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCCTTGTCC 416
Query 241 TTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTAT 300
|| ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||
Sbjct 417 TTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACCGTCTAT 476
Query 301 TCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTTC 360
|||||||||| ||| |||| || |||||||| ||||| ||||||||||||||||||||||
Sbjct 477 TCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCCATTTTC 536
Query 361 AAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCTG 420
|||||||||||||||| || || || ||||||| |||||||||||||||||||| ||||
Sbjct 537 AAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGAATGCTG 596
Query 421 GTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATATTC 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 597 GTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGATATTT 656
Query 481 TAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAAAA 540
||||||| |||||||| |||||||||||| ||||| |||| |||||||||||||||| ||
Sbjct 657 TAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGTTTAGAA 716
Query 541 ACTAAATCTAGTCACCATAATAT-AGTGTTTATCGTTGTAACACT-ACAGTAATGATGTA 598
||||||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||||
Sbjct 717 ACTAAATCTAGTCACCACAATACGAGTGTTTATGGTTGTAACACTTA-AGTAATGATGTA 775
Query 599 ACAAGTA-TTAAAGATTTATGCTGAATATAATAAAGAAAGGTGTTGTTCACCTAATTTGA 657
||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 776 ACAAG-AGTTAAAGATTTATGCTCAATATAATAAAGAAAGGTGTTGTTCACCTAATTTGA 834
Query 658 T 658
|
Sbjct 835 T 835
> AT5G39150.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15669898-15670808 REVERSE LENGTH=795
Length=795
Score = 857 bits (464), Expect = 0.0
Identities = 599/662 (90%), Gaps = 17/662 (3%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |
Sbjct 141 TTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTT-T 199
Query 61 T-CTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGT-CAGATCCAACGTGACAAC 118
| ||||||||||||||| ||||||| |||| |||| ||||| || |||||||||||||||
Sbjct 200 TCCTCAGGCCTCAACCAAGCAGGAATCACTAATAACAAAGTCCA-ATCCAACGTGACAAC 258
Query 119 GGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGA 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 AGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGA 318
Query 179 CTATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGT 238
||||||||| ||||| ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 319 CTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGT 378
Query 239 TCTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTT 298
|||||| || ||||| |||||||| || ||||||||||| ||||||||||| ||||||||
Sbjct 379 TCTTGTTGAAGGAACATTATATGTTGGTTTTGTCTCTTCGAATCAAGACAACAACCGTTT 438
Query 299 ATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTT 358
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 439 ATTCGCCAAAGTGCTGAACCCGGGAGACGTGTTCGTGTTCCCCATAGGAATGATCCATTT 498
Query 359 TCAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGC 418
|||||||||||||||||||||||||||| |||||||||||||| | |||||||| || ||
Sbjct 499 TCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAATGC 558
Query 419 TGGTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATAT 478
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct 559 TGGTGTCATCACGATCGCAGATACAGTGTTTGGATCAACGCCTCCGATTAATCCAGATAT 618
Query 479 TCTAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAA 538
| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 619 TTTGGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAAGACCTTGAGGCCAAGTTTAA 678
Query 539 AAACTAAATCTAGTCACCA-TAATATAGTGTTTATCGTTGTAACACT-ACAGTAATGATG 596
|||||||||| | ||| || | ||||||||||||||||||||| | |||||| ||
Sbjct 679 AAACTAAATC----C-CCAATATTG-AGTGTTTATCGTTGTAACACTTA-AGTAATC-TG 730
Query 597 TAACAAGTATTAAAGATTTATGCTGAATATAATAAAGAAAGGTGTTGTTCACCTAATTTG 656
||||| | | ||||| |||||||| |||| |||||| || |||||| | |||||||||||
Sbjct 731 TAACACGGAGTAAAGGTTTATGCTTAATAAAATAAA-AA-GGTGTTAT-CACCTAATTTG 787
Query 657 AT 658
||
Sbjct 788 AT 789
> AT5G39180.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15683464-15684353 REVERSE LENGTH=774
Length=774
Score = 846 bits (458), Expect = 0.0
Identities = 598/663 (90%), Gaps = 19/663 (3%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |
Sbjct 122 TTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTT-T 180
Query 61 T-CTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGT-CAGATCCAACGTGACAAC 118
| ||||||||||||||| ||||||| |||| |||| ||||| || |||||||||||||||
Sbjct 181 TCCTCAGGCCTCAACCAAGCAGGAATCACTAATAACAAAGTCCA-ATCCAACGTGACAAC 239
Query 119 GGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGA 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 AGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGA 299
Query 179 CTATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGT 238
||||||||| ||||| ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 300 CTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGT 359
Query 239 TCTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTT 298
|||||| || ||||| |||||||| || ||||||||||| ||||||||||| ||||||||
Sbjct 360 TCTTGTTGAAGGAACATTATATGTTGGTTTTGTCTCTTCGAATCAAGACAACAACCGTTT 419
Query 299 ATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTT 358
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 420 ATTCGCCAAAGTGCTGAACCCGGGAGACGTGTTCGTGTTCCCCATAGGAATGATCCATTT 479
Query 359 TCAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGC 418
|||||||||||||||||||||||||||| |||||||||||||| | |||||||| || ||
Sbjct 480 TCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAATGC 539
Query 419 TGGTGTTATCACGATCGCAGATACT-GTGTTTGGGTCAACGCCTCCGATTAATCCATATA 477
|||||| |||||||||||||||| | |||||||| ||||||||||||||||||||| |||
Sbjct 540 TGGTGTCATCACGATCGCAGATA-TAGTGTTTGGATCAACGCCTCCGATTAATCCAGATA 598
Query 478 TTCTAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTA 537
|| | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 599 TTTTGGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAAGACCTTGAGGCCAAGTTTA 658
Query 538 AAAACTAAATCTAGTCACCA-TAATATAGTGTTTATCGTTGTAACACT-ACAGTAATGAT 595
||||||||||| | ||| || | |||||||||| ||||||||| | |||||| ||
Sbjct 659 AAAACTAAATC----C-CCAATATTG-AGTGTTTATCAATGTAACACTTA-AGTAAT-AT 710
Query 596 GTAACAAGTATTAAAGATTTATGCTGAATATAATAAAGAAAGGTGTTGTTCACCTAATTT 655
|||||| | | ||||| |||||||| |||| |||||| || |||||| | ||||||||||
Sbjct 711 GTAACACGGAGTAAAGGTTTATGCTTAATAAAATAAA-AA-GGTGTTAT-CACCTAATTT 767
Query 656 GAT 658
|||
Sbjct 768 GAT 770
> AT5G39120.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15662705-15663486 REVERSE LENGTH=666
Length=666
Score = 802 bits (434), Expect = 0.0
Identities = 509/546 (93%), Gaps = 2/546 (0%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |
Sbjct 122 TTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTT-T 180
Query 61 T-CTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACG 119
| ||||||||||||||| ||||||| |||| |||| ||||||| |||||||||||||||
Sbjct 181 TCCTCAGGCCTCAACCAAGCAGGAATCACTAATAACAAAGTCAAATCCAACGTGACAACA 240
Query 120 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 300
Query 180 TATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGTT 239
|||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct 301 TATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGTT 360
Query 240 CTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTA 299
||||| || |||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct 361 CTTGTTGAAGGAACGTTATATGTTGGTTTTGTCTCTTCGAATCAAGACAACAACCGTTTA 420
Query 300 TTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 359
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 421 TTCGCCAAAGTGCTGAACCCGGGAGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 480
Query 360 CAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCT 419
||||||||||||||||||||||||||| |||||||||||||| | |||||||| || |||
Sbjct 481 CAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAATGCT 540
Query 420 GGTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATATT 479
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 541 GGTGTCATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGATATT 600
Query 480 CTAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAAA 539
| ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 601 TTGGCTCAAGCTTTTCAGTTAGATGTCAATGTTGTCAAAGACCTTGAGGCCAAGTTTAAA 660
Query 540 AACTAA 545
||||||
Sbjct 661 AACTAA 666
> AT5G39110.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15657802-15658584 REVERSE LENGTH=669
Length=669
Score = 791 bits (428), Expect = 0.0
Identities = 507/546 (93%), Gaps = 2/546 (0%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |
Sbjct 125 TTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTCTT-T 183
Query 61 T-CTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACG 119
| ||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||
Sbjct 184 TACTCAGGCCTCAACCAAGCAGGAACCACTAATAATAAAGTCAAATCCAACGTGACAACA 243
Query 120 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 303
Query 180 TATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGTGCTACTGAGATCCTTGTT 239
|||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct 304 TATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATCCTTGTT 363
Query 240 CTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTA 299
||||| |||||||| |||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 364 CTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAACCGTTTA 423
Query 300 TTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 359
||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 424 TTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATCCATTTT 483
Query 360 CAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCT 419
||||||||||||||||||||||| ||| |||||||||||||| | |||||||| || |||
Sbjct 484 CAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAAAATGCT 543
Query 420 GGTGTTATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCATATATT 479
||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 544 GGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAGATATT 603
Query 480 CTAGCTCAGGCATTTCAGTTAGATGTCAATGTTGTCAAGGACCTTGAGGCCAAGTTTAAA 539
| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 604 TTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAGTTTAAA 663
Query 540 AACTAA 545
||||||
Sbjct 664 AACTAA 669
> AT5G39160.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15679014-15680002 REVERSE LENGTH=882
Length=882
Score = 470 bits (254), Expect = 9e-132
Identities = 447/541 (83%), Gaps = 10/541 (2%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||| ||| ||||| || ||||||| || | | ||| ||||||| ||||
Sbjct 154 TTTTTGTGAATGGTAGGTTTTGTAAAGACCCGAAGCGAGTCGATGCAAAAGATTTTTTCT 213
Query 61 TCTCAGGCCTCAACCA-GGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACG 119
||||||| ||||| | | | || ||||| ||||| |||| | || || ||||| ||
Sbjct 214 TCTCAGGTCTCAA-TATGCCCGGGAACACCAATAATCAAGTTGGCTCTAATGTGACCACT 272
Query 120 GTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGAC 179
|| ||||| |||||||| |||||| ||||||| |||||||||| |||||||||||||||
Sbjct 273 GTTAATGTTGATCAGATCCCAGGGCTAAACACCATGGGAATATCATTGGTCCGCATAGAC 332
Query 180 TATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGT-GCTACTGAGATCCTTGT 238
|| || ||| |||| ||||| || |||||||||||||| ||| ||| | |||||||||||
Sbjct 333 TACGCACCGCATGGCCAAAATCCACCTCACACGCACCCTCGTGGCT-CAGAGATCCTTGT 391
Query 239 TCTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTT 298
|||||||| ||||| ||||| ||||| |||||||||||||||||||| || ||||| ||
Sbjct 392 CCTTGTCGAAGGAACATTATACGTCGGTTTTGTCTCTTCCAATCAAGATAACAACCGGTT 451
Query 299 ATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTT 358
|||||||||||| || ||||||| || || |||||||||||||||||||||||||||||
Sbjct 452 ATTCGCCAAAGTATTGCACCCCGGTGATGTTTTCGTGTTCCCCATAGGAATGATCCATTT 511
Query 359 TCAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGC 418
||| || ||| | ||||| | || ||| | || ||||| ||||||||||| ||||||||
Sbjct 512 TCAGGTAAATGTGGGGAAAATTCCAGCAGTTGCTTTTGCGGGATTGAGTAGCCAGAACGC 571
Query 419 TGGTGTTATCACGATCGCAGATACTGTGTTTGGGTC-AACGCCTCCGATTAATCCATATA 477
||||||||||| || ||| | |||||||||||||| || ||||||||| ||||| |
Sbjct 572 AGGTGTTATCACAATTGCAAACACTGTGTTTGGGTCCAAT-CCTCCGATTTATCCAGAGC 630
Query 478 TTCTAGCTCAGG-CATTTCAGTTAGATGTCAA-TGTTGTCAAGGACCTTGAGGCCAAGTT 535
|||| || |||| | || ||||| |||| ||| ||||||||| || ||| ||||||||||
Sbjct 631 TTCTTGC-CAGGGCGTTCCAGTTGGATG-CAAGTGTTGTCAAAGAACTTCAGGCCAAGTT 688
Query 536 T 536
|
Sbjct 689 T 689
> AT5G39190.1 | Symbols: GLP2A, ATGER2, GER2 | germin-like protein
2 | chr5:15692591-15693581 REVERSE LENGTH=884
Length=884
Score = 470 bits (254), Expect = 9e-132
Identities = 446/540 (83%), Gaps = 8/540 (1%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||| ||| ||||| || ||||||| || | | ||| ||||||| ||||
Sbjct 157 TTTTTGTGAATGGTAGGTTTTGTAAAGACCCGAAGCGAGTCGATGCAAAAGATTTTTTCT 216
Query 61 TCTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACGG 120
||||||| ||||| | | || ||||| ||||| |||| | || || ||||| || |
Sbjct 217 TCTCAGGTCTCAATGTGCCCGGGAACACCAATAATCAAGTTGGCTCTAATGTGACCACTG 276
Query 121 TCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACT 180
| ||||| |||||||| |||||| ||||||| |||||||||| ||||||||||||||||
Sbjct 277 TTAATGTTGATCAGATCCCAGGGCTAAACACCATGGGAATATCATTGGTCCGCATAGACT 336
Query 181 ATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGT-GCTACTGAGATCCTTGTT 239
| || ||| |||| ||||| || |||||||||||||| ||| ||| | |||||||||||
Sbjct 337 ACGCACCGCATGGCCAAAATCCACCTCACACGCACCCTCGTGGCT-CAGAGATCCTTGTC 395
Query 240 CTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTA 299
|||||||| ||||| ||||| ||||| |||||||||||||||||||| || ||||| |||
Sbjct 396 CTTGTCGAAGGAACATTATACGTCGGTTTTGTCTCTTCCAATCAAGATAACAACCGGTTA 455
Query 300 TTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 359
||||||||||| || ||||||| || || ||||||||||||||||||||||||||||||
Sbjct 456 TTCGCCAAAGTATTGCACCCCGGTGATGTTTTCGTGTTCCCCATAGGAATGATCCATTTT 515
Query 360 CAAGTGAATATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGCT 419
|| || ||| | ||||| | || ||| | || ||||| ||||||||||| ||||||||
Sbjct 516 CAGGTAAATGTGGGGAAAATTCCAGCAGTTGCTTTTGCGGGATTGAGTAGCCAGAACGCA 575
Query 420 GGTGTTATCACGATCGCAGATACTGTGTTTGGGTC-AACGCCTCCGATTAATCCATATAT 478
||||||||||| || ||| | |||||||||||||| || ||||||||| ||||| | |
Sbjct 576 GGTGTTATCACAATTGCAAACACTGTGTTTGGGTCCAAT-CCTCCGATTTATCCAGAGCT 634
Query 479 TCTAGCTCAGG-CATTTCAGTTAGATGTCAA-TGTTGTCAAGGACCTTGAGGCCAAGTTT 536
||| || |||| | || ||||| |||| ||| ||||||||| || ||| |||||||||||
Sbjct 635 TCTTGC-CAGGGCGTTCCAGTTGGATG-CAAGTGTTGTCAAAGAACTTCAGGCCAAGTTT 692
> AT5G39130.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15665502-15666444 REVERSE LENGTH=836
Length=836
Score = 464 bits (251), Expect = 4e-130
Identities = 446/541 (82%), Gaps = 10/541 (2%)
Strand=Plus/Plus
Query 1 TTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCCAAGGCAGAAGATTTCTTCT 60
||||||||||||||| ||| ||||| || ||| ||| || | | ||| ||||||| ||||
Sbjct 153 TTTTTGTGAATGGTAGGTTTTGTAAAGACCCGGAGCGAGTCGATGCAAAAGATTTTTTCT 212
Query 61 TCTCAGGCCTCAACCAGGCAGGAAACACTGATAATAAAGTCAGATCCAACGTGACAACGG 120
||||||| ||||| | | || ||||| ||||| |||| | || || ||||| || |
Sbjct 213 TCTCAGGTCTCAATGTGCCCGGGAACACCAATAATCAAGTTGGCTCTAATGTGACCACTG 272
Query 121 TCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGCATAGACT 180
| ||||| |||||||| || ||| ||||||| |||||||||| ||||||||||||||||
Sbjct 273 TTAATGTTGATCAGATCCCCGGGCTAAACACCATGGGAATATCATTGGTCCGCATAGACT 332
Query 181 ATGCGCCGTATGGACAAAACCCGCCTCACACGCACCCGCGT-GCTACTGAGATCCTTGTT 239
| || ||| |||| ||||| || |||||||||||||| ||| ||| | |||||||||||
Sbjct 333 ACGCACCGCATGGCCAAAATCCACCTCACACGCACCCTCGTGGCT-CAGAGATCCTTGTC 391
Query 240 CTTGTCGAGGGAACGTTATATGTCGGGTTTGTCTCTTCCAATCAAGACAATAACCGTTTA 299
|||||||| ||||| ||||| ||||| |||||||||||||||||||| || ||||| |||
Sbjct 392 CTTGTCGAAGGAACATTATACGTCGGTTTTGTCTCTTCCAATCAAGATAACAACCGGTTA 451
Query 300 TTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATAGGAATGATCCATTTT 359
||||||||||| || ||||||| || || || |||||||||||||||||||||||||||
Sbjct 452 TTCGCCAAAGTATTGCACCCCGGTGATGTTTTTGTGTTCCCCATAGGAATGATCCATTTT 511
Query 360 CAAGTGAA-TATCGGGAAGACCCCCGCAATGGCCTTTGCTGGATTGAGTAGTCAGAACGC 418
|| || || ||||||||| | || ||||| || ||||| ||||||||||| ||||||||
Sbjct 512 CA-GTTAAATATCGGGAAAATTCCAGCAATTGCTTTTGCGGGATTGAGTAGCCAGAACGC 570
Query 419 TGGTGTTATCACGATCGCAGATACTGTGTTTGGGTCAA-CGCCTCCGATTAATCCATATA 477
|||||||||||| || ||| | |||||||| ||||||| | ||||||||| ||||| |
Sbjct 571 TGGTGTTATCACAATTGCAAACACTGTGTTCGGGTCAAAC-CCTCCGATTTATCCAGAGC 629
Query 478 TTCTAGCTCAGG-CATTTCAGTTAGATGTCAA-TGTTGTCAAGGACCTTGAGGCCAAGTT 535
|||| || |||| | || ||||| |||| ||| ||||||||| || ||| | ||||||||
Sbjct 630 TTCTTGC-CAGGGCGTTCCAGTTGGATG-CAAATGTTGTCAAAGAACTTCAAGCCAAGTT 687
Query 536 T 536
|
Sbjct 688 T 688
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 31798215051
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5