BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494086 Length=801 Score E Sequences producing significant alignments: (Bits) Value AT5G38940.1 | Symbols: | RmlC-like cupins superfamily protein ... 1232 0.0 AT5G38930.1 | Symbols: | RmlC-like cupins superfamily protein ... 1014 0.0 AT5G38910.1 | Symbols: | RmlC-like cupins superfamily protein ... 529 2e-149 > AT5G38940.1 | Symbols: | RmlC-like cupins superfamily protein | chr5:15588757-15589666 FORWARD LENGTH=826 Length=826 Score = 1232 bits (667), Expect = 0.0 Identities = 757/801 (95%), Gaps = 4/801 (0%) Strand=Plus/Plus Query 1 ATGGCAATGAAGAGTCTCTCATATCTTGCAGTGCTCTCTCTCTTGGCTTTAACACTTCCA 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 15 ATGGCAATGAAGAGTCTCTCATTTCTTGCAGTGCTCTCTCTCTTGGCTTTAACACTTCCA 74 Query 61 TTGGCCATTGCTTCTGATCCAAGCCAACTTCAAGACTTTTGTGTCAGCGCCAACACCTCA 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75 TTAGCCATTGCTTCTGATCCAAGCCAACTTCAAGACTTTTGTGTCAGCGCCAACACCTCA 134 Query 121 GCAAATGGAATTTTTGTTAATGGAAAGTTCTGCAAGGATCCGAAGCTCGTCACAGCAGAT 180 || ||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct 135 GCCAATGGCGTTTTTGTTAATGGAAAGTTCTGCAAGGACCCAAAGCTGGTCACAGCAGAT 194 Query 181 GACTTCTTTTTCTCAGGGCTTCAAAATGCAAGACCCGTAACTAGTCCAGTTGGGTCGACC 240 ||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||| Sbjct 195 GACTTCTTTTTCTCAGGGCTTCAAACTGCAAGACCCATTACTAGTCCCGTTGGGTCGACC 254 Query 241 GTGACAGCCGTCAATGTTAACAACCTTCTCGGGTTAAACACTCTTGGAATCTCCCTTGTT 300 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 255 GTGACAGCCGTCAATGTTAACAACCTTCTTGGATTAAACACTCTTGGAATCTCCCTTGTC 314 Query 301 CGTATTGATTATGCGGTTAACGGACAAAACCCGCCTCACACTCACCCACGTGCCACGGAG 360 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct 315 CGTATTGATTATGCGGTTAACGGACAGAACCCACCTCACACCCACCCACGTGCCACAGAG 374 Query 361 ATCTTGGTTGTCGAACAAGGAACACTTCTCGTAGGGTTTGTCACATCAAACCCGGATAAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 375 ATCTTGGTTGTCGAACAAGGAACACTTCTCGTAGGGTTTGTCACATCAAACCCGGATAAT 434 Query 421 CGCCTCTTCACTAAAGTTCTCAACGAGGGTGATGTATTTGTGTTTCCAGAGGGACTAATC 480 ||||| ||| | ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 435 CGCCTATTCTCAAAAGTTCTCAACGAGGGTGATGTATTTGTGTTTCCCGAGGGACTCATC 494 Query 481 CATTTCCAAGCAAACATTGGCAAGGGACCAGCAGTTGCATTCGCCGCTCTAAGCAGCCAA 540 ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 495 CATTTTCAAGCAAACATTGGCAAGGCACCAGCGGTTGCATTCGCCGCTCTAAGCAGCCAA 554 Query 541 AACCCTGGTGTCATCACTATTGCCAACACCGTGTTTGGGGCTAACCCAGCCATAGACCCA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 555 AACCCTGGTGTCATCACTATTGCCAACACCGTGTTTGGGGCTAACCCAGCCATAAACCCA 614 Query 601 ACTATTCTTGCAAAGGCGTTCCAGTTGGACCCAAGGGTTGTTGTGGATCTACAGACCAAG 660 ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct 615 ACTATTCTTGCAAAGGCATTCCAGTTGAACCCAAGGGTTGTCATGGATCTACAGACCAAG 674 Query 661 TTCAAGAAATAATAATATTGTGATTTGAATTGCTTTCCCTTTATGTACTTGTGCATGAAT 720 ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| ||||| Sbjct 675 TTCAAGAAATAATGATATCGTGATTTGAGTTGCTTTCCCTTTATGTACTTGTGCCTGAAT 734 Query 721 AACAATCTTGTATTTCCGTTCATCGTATCATCATGACATGATGTCTTTCTTTGCTTTTAC 780 || |||||||||||||||| ||| ||||||||| | |||||||||| ||||||||||| Sbjct 735 AAGGATCTTGTATTTCCGTTTATCATATCATCAT-A--TGATGTCTTT-TTTGCTTTTAC 790 Query 781 CTTGATTCAATTCTAAATAAA 801 ||||||||||||||||||||| Sbjct 791 CTTGATTCAATTCTAAATAAA 811 > AT5G38930.1 | Symbols: | RmlC-like cupins superfamily protein | chr5:15585073-15585841 FORWARD LENGTH=672 Length=672 Score = 1014 bits (549), Expect = 0.0 Identities = 635/676 (94%), Gaps = 8/676 (1%) Strand=Plus/Plus Query 1 ATGGCAATGAAGAGTCTCTCATATCTTGCAG-TGCTCTCTCTCTTGGCTTTAACACTTCC 59 |||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||| Sbjct 1 ATGGCAATGAAGAGTCTCTCATTTCTTGCAGCT-CTATCTCTCTTGGCTTTAACACTTCC 59 Query 60 ATTGGCCATTGCTTCTGATCCAAGCCAACTTCAAGACTTTTGTGTCAGCGCCAACACCTC 119 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 60 ATTAACCATTGCTTCTGATCCAAGCCAACTTCAAGACTTTTGTGTCAGCGCCAACAGCTC 119 Query 120 AGCAAATGGAATTTTTGTTAATGGAAAGTTCTGCAAGGATCCGAAGCTCGTCACAGCAGA 179 ||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct 120 AGCAAATGGCGTTTTTGTTAATGGAAAGTTCTGCAAGGACCCAAAGCTGGTCACAGCAGA 179 Query 180 TGACTTCTTTTTCTCAGGGCTTCAAAATGCAAGACCCGTAACTAGTCCAGTTGGGTCGAC 239 ||||||||||||| |||||||||||| |||||||||| |||| ||||| ||||||||||| Sbjct 180 TGACTTCTTTTTCCCAGGGCTTCAAACTGCAAGACCCATAACAAGTCCTGTTGGGTCGAC 239 Query 240 CGTGACAGCCGTCAATGTTAACAACCTTCTCGGGTTAAACACTCTTGGAATCTCCCTTGT 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 240 CGTGACAGCCGTCAATGTTAACAACCTTCTTGGGTTAAACACTCTTGGAATCTCCCTTGT 299 Query 300 TCGTATTGATTATGCGGTTAACGGACAAAACCCGCCTCACACTCACCCACGTGCCACGGA 359 |||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||| Sbjct 300 CCGTATTGATTATGCGGTTGACGGACAGAACCCACCTCACACCCACCCACGTGCCACGGA 359 Query 360 GATCTTGGTTGTCGAACAAGGAACACTTCTCGTAGGGTTTGTCACATCAAACCCGGATAA 419 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| Sbjct 360 GATCTTGGTTGTCGAACTAGGAACACTTCTCGTAGGGTTTGTTACATCAAACCCCGATAA 419 Query 420 TCGCCTCTTCACTAAAGTTCTCAACGAGGGTGATGTATTTGTGTTTCCAGAGGGACTAAT 479 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 420 TCGCCTATTCACTAAAGTTCTCAACGAGGGTGATGTATTTGTGTTTCCAGAGGGACTCAT 479 Query 480 CCATTTCCAAGCAAACATTGGCAAGGGACCAGCAGTTGCATTCGCCGCTCTAAGCAGCCA 539 |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 480 CCATTTTCAAGCAAACATTGGCAAGGCACCAGCGGTTGCATTCGCCGCTCTAAGCAGCCA 539 Query 540 AAACCCTGGTGTCATCACTATTGCCAACA-CCGTGTTTGGGGCTAACCCAGCCAT-AGAC 597 |||||||||||||||||||||||| | || ||||||||||||||||||||||||| | || Sbjct 540 AAACCCTGGTGTCATCACTATTGC-ACCAACCGTGTTTGGGGCTAACCCAGCCATCA-AC 597 Query 598 CCAACTATTCTTGCAAAGGCGTTCCAG-TTGGACCCAAGGGTTGTTGTGGATCTACAGAC 656 |||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| Sbjct 598 CCAAATATTCTTGCAAAGGCGTTCCAGGTTG-ACCCAAGGGTTGTCATGGATCTACAGAC 656 Query 657 CAAGTTCAAGAAATAA 672 |||||||||||||||| Sbjct 657 CAAGTTCAAGAAATAA 672 > AT5G38910.1 | Symbols: | RmlC-like cupins superfamily protein | chr5:15578811-15579584 FORWARD LENGTH=669 Length=669 Score = 529 bits (286), Expect = 2e-149 Identities = 548/672 (82%), Gaps = 28/672 (4%) Strand=Plus/Plus Query 7 ATGAAGAGTCTCTCATATCTTGCAGTGCTCTCTCTCTTGGCTTTAACACTTCCATT-GGC 65 ||||| ||| |||||| ||||||||| | ||| ||||||| |||||||| |||| | Sbjct 1 ATGAAAAGTTTCTCATTTCTTGCAGTTTTATCTATCTTGGCAATAACACTTTCATTAAG- 59 Query 66 CATTGCTTCTGATCCAAGC-CAACTTCAAGACTTTTGTGTCAGCGCCAACACCTCAGCAA 124 || ||||| || |||||| | ||||| |||||||| || | | ||||||| ||||| Sbjct 60 CAAGGCTTCGGACCCAAGCTC-TCTTCAGGACTTTTGCGTTGGTGTCAACACCCCAGCAG 118 Query 125 ATGGAATTTTTGTTAATGGAAAGTTCTGCAAGGATCCGAAGCTCGTCACAGCAGATGACT 184 |||| ||||||| || ||||||||||||||||| |||||||||||||||| ||| |||| Sbjct 119 ATGGTGTTTTTGTGAACGGAAAGTTCTGCAAGGACCCGAAGCTCGTCACAGTAGAAGACT 178 Query 185 TCTTTTTCT-CAGGGCTTCAAAATGCAAGACCCGTAACTAGTCC---AGTTGGGTCGACC 240 ||||||| | ||||||| || | |||||| || | ||| ||| | |||||| | | Sbjct 179 TCTTTTT-TACAGGGCTCCACGAGGCAAGA-CC--ACCTAATCCAAAAACTGGGTCTAAC 234 Query 241 GTGACAGCCGTCAATGTTAACAACCTTCTC-GGGTTAAACACTCTTGGAATCTCCCTTGT 299 || ||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||| Sbjct 235 GTAACAGCCGTCAATGTTAACAACCTAC-CAGGGTTAAACACTCTTGGAATCTCACTTGT 293 Query 300 TCGTATTGATTATGCG-GTTAACGGACAAAACCCGCCTCACACTCACCCACGTGCCACGG 358 ||||| || |||| | ||| ||||||| ||||| |||||||| |||||||||||| | | Sbjct 294 CCGTATCGACTATG-GAGTTTACGGACAGAACCCACCTCACACCCACCCACGTGCCTCCG 352 Query 359 AGATCTTGGT-TGTCGAACAAGGAACACTTCTCGTAGGGTTTGTCACATCAAACCCGGAT 417 || |||| || ||||| ||||||||| |||| ||||||||||| |||||||| || Sbjct 353 AGGTCTT-GTATGTCGCGGTTGGAACACTTTTCGTTGGGTTTGTCACGTCAAACCCCGAA 411 Query 418 AATCGCCTCTTCACTAAAGTTCTCAACGAGGGTGATGTATTTGTGTTTCCAGAGGGACTA 477 |||||||| |||| |||| || ||||||||||||| |||||||||||| ||||||| Sbjct 412 AATCGCCTTTTCAGTAAAACACTTTACGAGGGTGATGTCTTTGTGTTTCCACAGGGACTC 471 Query 478 ATCCATTTCCAAGCAAACATTGGCAAGGGA-CCAGCAGTTGCATTCGCCGCTCTAAGCAG 536 || |||||||||| ||| |||| || | || || ||||||||||| | ||| ||||| Sbjct 472 ATTCATTTCCAAGTGAACGTTGG-AAAATATCCGGCGGTTGCATTCGCTGGTCTCAGCAG 530 Query 537 CCAAAACCCTGGTGTCATCACTATTGCCAACACCGTGTTTGGGGCTAACCCAGCC-ATAG 595 ||||||||||||||||||||||||||| |||||||||||||| |||||||| | |||| Sbjct 531 CCAAAACCCTGGTGTCATCACTATTGCTGACACCGTGTTTGGGTCTAACCCA-CAGATAG 589 Query 596 ACCCAACTATTCTTGCAAAG-GCGTTCCAG-TTGGACCC-AAGGGTTGTTGTGGATCTAC 652 |||||| | ||||||||| | || |||||| ||| |||| ||| |||| ||||||||| Sbjct 590 ACCCAAGTTTTCTTGCAA-GTGCATTCCAGGTTG-ACCCTAAGA-TTGTCATGGATCTAC 646 Query 653 AGACCAAGTTCA 664 |||||||||||| Sbjct 647 AGACCAAGTTCA 658 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38981698072 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5