BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494105
Length=2297
Score E
Sequences producing significant alignments: (Bits) Value
AT5G38640.1 | Symbols: | NagB/RpiA/CoA transferase-like superf... 3759 0.0
AT2G44070.1 | Symbols: | NagB/RpiA/CoA transferase-like superf... 1459 0.0
AT5G38630.1 | Symbols: ACYB-1, CYB-1 | cytochrome B561-1 | chr5... 641 0.0
> AT5G38640.1 | Symbols: | NagB/RpiA/CoA transferase-like superfamily
protein | chr5:15467679-15470724 REVERSE LENGTH=2320
Length=2320
Score = 3759 bits (2035), Expect = 0.0
Identities = 2219/2307 (96%), Gaps = 15/2307 (1%)
Strand=Plus/Plus
Query 1 AAAAATTCGATAGCTTCTTCTTCTCCGACGCGATGGAGTCTCGACGGAACCCTCGCGCCG 60
||||| || | |||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 19 AAAAAATCCAGAGCTTCTTCTCCTCCGACGCGATGGAGTCTCGTCGGAACCCTCGCGCCG 78
Query 61 TAGTGGATCCAAAGGTCCGACAAGTCGGTTTCTTCACATCATCTCAACCCGATTCTTC-A 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 79 TAGTAGATCCAAAGGTCCGACAAGTCGGTTTCTTCACATCATCTCAACCCGATTCATCAA 138
Query 120 -TCAACTCAACAACAACCCGACCCGATCGCTGCCACCTC--C-GCTTCTTCTTCTTCCAC 175
|||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct 139 CTCAA--CAACAACAACCCGACCCGATCGCTGCTACCTCTGCTTCTTCTTCTTCTTCCAC 196
Query 176 CATTTCTCCTTCCGGTAACTCACTCTCCCCCGTCATGATTCCTCCTCCTCTTCACAATTC 235
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 197 CATTTCTCCTTCCGGTAACTCACTCTCCCCCGTCATGATTCCTCCTCCTCGTCTCAATTC 256
Query 236 CTCTGATACTTTCCCCCTTCGCGCCGCCGCT-GCTGGTGCTGCTGCGTCAGCCGTATCTC 294
||||||||||||||| ||||| | ||| | | ||||||||||||||||||||||| ||||
Sbjct 257 CTCTGATACTTTCCCTCTTCGAGTCGCTG-TCGCTGGTGCTGCTGCGTCAGCCGTGTCTC 315
Query 295 CTTCTTCGTTTTCTTACTCCAGTCGCCGTGATTTCCCTGACGGATCAACGACGGCGTCTC 354
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 316 CTTCTTCGTTTTCTTACTCAAGTCGCCGTGATTTCCCTGATGGATCAACGACGGCGTCTC 375
Query 355 CTGGACGCCATTCCAGGGGTAGTTTCGTAAAATCTTCTGTTCCTGTTGCTTCTTCGCTTC 414
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 376 CTGGACGCCATTCCAGGGGTAGTTTCGTAAAATCATCTGTTCCTGTTGCTTCTTCGCTGC 435
Query 415 CTGGTGTTGGAATTGATTCTATGGCTGCGGCTAAATCTAGTAGTGTTCCTGCTAGTGGAT 474
||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 436 CTGGTATTGGGATGGATTCTATGGCTGCTGCTAAATCTAGTAGTGTTCCTGCTAGTGGTT 495
Query 475 TAACTACTGTCTCTGTTGTTACCATGCCTCCTGGACTTTCTGAGAAGGCTAGTGGAATGG 534
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TAACCACTGTCTCCGTCGTTACCATGCCTCCTGGACTTTCTGAGAAGGCTAGTGGAATGG 555
Query 535 AGGTGCAGAGTGACCAGAAGAAGCCATTGAAAGAGAAAACCACAAAAGCTGAGAGACGAG 594
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 556 AGGTGCAGAGTGACCAGAAGAAGCCATTGAAAGAGAAAACCACTAAAGCTGAGAGACGAG 615
Query 595 CTATTCAAGAAGCTCAAAGAGCTGCTAAAGCTGCTGCAAAAGCTGATGGTGGGAAGGTGG 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 CTATTCAAGAAGCTCAAAGAGCTGCTAAAGCTGCTGCAAAAGCTGATGGTGGGAAGGTGG 675
Query 655 CACCAGTGAT-CTCAGCCTCGGTGGCTTCAACAAGTGGTAAAGCTGCTAAACCAGCAAAG 713
|||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 676 CACCAGTG-TCCTCAGCCTCGGTGGCTTCAACAAGTGTTAAAGCTGCTAAACCAGCGAAG 734
Query 714 GCTACATCTCAGAAGAATGATGTTGCCGTTGCTGCTGGAGCAGCTGAGAAGAAGGGAGGT 773
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 735 GCTACATCTCAGAAGAATGATGTTGCTGTTGCTACTGGAGCAGCTGAGAAGAAGGGAGGT 794
Query 774 CCATCTGAGAAAGATAGAAAGAAAGATGCTCCTCATCCCCGCATGCAGTATGATGATGAG 833
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 CCATCTGAAAAAGATAGAAAGAAAGATGCTCCTCATCCCCGCATGCAGTATGATGATGAG 854
Query 834 AGTAGAGTCGTGAAGGCCAAAAGACGTGCTGTTGTAAAACAGACCGAGGCTAAAAACAGG 893
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 855 AGTAGAGTCGTGAAGGCTAAAAGACGTGCTGTTGTAAAACAGACCGAGGCTAAAAACAGG 914
Query 894 GTTGAGCTATTTAGGCATTTGCCTCAGTATGAACATGGCACTCAACTTCCTGATCTCGAG 953
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 915 GTTGAGCTATTTAGGCATTTGCCTCAGTATGAGCATGGCACTCAACTTCCTGATCTCGAG 974
Query 954 ACTAAGTTCTTCCAACTTGACCCTATGCATCCTGCTGTGTACAAGGTTGGTCTTCAATAT 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 ACTAAGTTCTTCCAACTTGACCCTATGCATCCTGCTGTGTACAAGGTTGGTCTTCAATAT 1034
Query 1014 CTTTCTGGGGATATCTCTGGTGGCAATGCCAGGTGTATTGCGATGCTCCAAGCATTCCAA 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 CTTTCTGGGGATATCTCTGGTGGCAATGCCAGGTGTATTGCGATGCTCCAAGCATTCCAA 1094
Query 1074 GAGGTTGTCAAAGATTATTCGACACCGCCTGAGAAGTCTCTTAACAGGGACATGACTGCG 1133
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1095 GAGGTTGTCAAAGATTATTCAACACCGCCTGAGAAGTCTCTTAACAGGGACATGACTGCG 1154
Query 1134 AAAATAAGTAGCTATGTCTCTTTCCTAATTGAATGCCGTCCGCTTTCGATTAGCATGGGA 1193
|||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct 1155 AAAATAAGTAGCTACGTCTCCTTCCTCATAGAATGCCGTCCGCTTTCGATTAGCATGGGA 1214
Query 1194 AACGCAATCCGATTTGTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCT 1253
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 AACGCAATACGATTTGTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCT 1274
Query 1254 GAAGCAAAAGCTGCTCTTCAGTCAGATATTGAACGGTTCATTAACGATAAGATCATAGGG 1313
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1275 GAAGCAAAAGCTACTCTTCAGTCAGATATTGAACGGTTCATTAACGAGAAGATCATAGTG 1334
Query 1314 GCAGATACGGTGATAGTCAAACATGCTGTTACTAAAATCAGAGACGGTGATGTCCTTCTG 1373
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1335 GCAGATACGGTGATAGTCAAACATGCTGTTACTAAAATAAGAGACGGTGATGTCCTTCTG 1394
Query 1374 ACCTATGGATCTCCCACGGCTGTTGAGATGGTATTATTACATGCACATGAACTCAGGAAA 1433
||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1395 ACCTACGGATCTCCCACTGCTGTTGAGATGGTAATATTACATGCACATGAACTCAGGAAA 1454
Query 1434 AAGTTTCGTGTCTTGGTGGTGGATTCTCGTCCAAAGCTTGAAGGGCAGCTACTGCTTCGT 1493
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1455 AAGTTTCGAGTCTTGGTGGTGGATTCTCGTCCAAAGCTTGAAGGGCAGCTACTGCTTCGT 1514
Query 1494 AGATTGATCAAACGAGGCATTAACTGTACATACACTCATATAAATGCCATTTCATATATC 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1515 AGATTGATCAAACGAGGCATTAACTGTACATACACTCATATAAATGCCATTTCATATATC 1574
Query 1554 ATGCACGAAGTCACCAAAGTGTTTTTGGGCGCCTCATCAGTTTTGTCTAACGGAACAGTT 1613
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1575 ATGCATGAAGTCACCAAAGTGTTTTTGGGCGCCTCGTCAGTTTTGTCTAACGGAACAGTT 1634
Query 1614 TACTCGAGGGTTGGGACTGCTTGTGTTGCAATGGTTGCAAATGCATTCCGTGTTCCTGTG 1673
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1635 TATTCAAGGGTTGGGACTGCTTGTGTTGCAATGGTTGCAAATGCATTCCGTGTTCCTGTG 1694
Query 1674 CTTGTATGTTGCGAAGCCTACAAGTTCCATGAGAGGGTGCAATTGGATTCAATATGCTCC 1733
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1695 CTTGTATGTTGCGAAGCCTACAAGTTCCATGAGAGGGTGCAATTGGATTCAATATGTTCC 1754
Query 1734 AATGAGCTCGGTGATCCAAATGCTATTTCAAAAGTTCATGGAAGAGAAGACATAAACTAC 1793
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1755 AATGAGCTTGGTGATCCAAATGCTATTTCAGAAGTTCATGGAAGAGAAGACATAAACTAT 1814
Query 1794 TTAGATGGCTTGACCAACAACGCAAACCTGCAGTTTTTGAACTTGATGTATGATGCTACA 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1815 TTAGATGGCTTGACCAACAACGCAAACCTGCAGTTTTTGAACTTGATGTATGATGCTACA 1874
Query 1854 CCTTCAGATTACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGCGTG 1913
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1875 CCTTCAGATTACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGTGTG 1934
Query 1914 CCTGTCATCGTGAGAGAATATCAGAAAGAACACTTGCTTGTCTAAGCAAAATTCGTTTTT 1973
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1935 CCTGTCATCGTGAGAGAATATCAGAAAGAACACTTGCTTGTCTAAGCAAAGCTCATTTTT 1994
Query 1974 GCGAAAGCTCTTCTTCTCCAACCCCTTCCTCTAGCTCAGGCTCTTCTCGTCACAACCC-G 2032
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
Sbjct 1995 GCGAAAGCTCTTCTTCTCCAACCCCCTCCTCTAGCTCAGGCTCTTCTCATCACAACCCAG 2054
Query 2033 CATAGAATAACTACTGGCACTGCCTCCC-TCATCCGCTTCTTTTCCTGAGTACCGGATTC 2091
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 2055 -ATAGAATAACTACCGGCACTGCCTCCCCTCATCCGCTTCTTTTCCTGAGTACCGGGTTC 2113
Query 2092 Attttttt-GGCCTTGACATGTTTTTAGTAACTTTTGACTCTGTGAAGAGTGCGATTCAT 2150
|||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 2114 ATTTTTTTTGGCCTTGACTTGTTTTTAGAAACTTTTGACTCTGTGAAGAGTGCGATTCAT 2173
Query 2151 CATCCGCCTCTCCGGGAAGATTTTATCGATATCGGTGATGtttttttttGTCTGTGATGT 2210
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2174 CATCCGCCTCTCCGGGAAGATTTTATCGATATCGGTGATGTTTTTCTTTGTCTGTGATGT 2233
Query 2211 ATGAGTGAGGCTTCTCTTACTCTCCCTTCTCATAGAGTTTGATACAAATCTTTCTCAGAT 2270
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 2234 ATGAGTGAGGCTTCTCTTACTCTCCCTTCTCATGGAGGTTGATACAAATCTTTCTCAGAT 2293
Query 2271 TCTATGCCAAtttttttttGGTTCAGT 2297
||||||||||||||| || ||||||||
Sbjct 2294 TCTATGCCAATTTTTGTTGGGTTCAGT 2320
> AT2G44070.1 | Symbols: | NagB/RpiA/CoA transferase-like superfamily
protein | chr2:18231047-18232493 REVERSE LENGTH=1076
Length=1076
Score = 1459 bits (790), Expect = 0.0
Identities = 924/989 (93%), Gaps = 7/989 (1%)
Strand=Plus/Plus
Query 969 CTTGACCCTATGCATCCTGCTGTGTACAAGGTTGGTCTTCAATATCTTTCTGGGGATATC 1028
||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 16 CTTGACCCTATGCATTCTGCTGTGTACAAGGTTGGTCTTCATTATCTTTCTTGGGATATT 75
Query 1029 TCTGGTGGCAATGCCAGGTGTATTGCGATGCTCCAAGCATTCCAAGAGGTTGTCAAAGAT 1088
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 76 TCTGGTGGCAATGCCAGATGTATTGCGATGCTCCAAGCATTCCAAGAGGTTGTTAAAGAT 135
Query 1089 TATTCGACACCGCCTGAGAAGT-CTCTTAACAGGGACATGACTGCGAAAATAAGTAGCTA 1147
|| ||||| ||||||||||| | | ||||| || ||||||||||| |||||||||||||
Sbjct 136 TACTCGACGCCGCCTGAGAA-TACCCTTAATAGAGACATGACTGCTCAAATAAGTAGCTA 194
Query 1148 TGTCTCTTTCCTAATTGAATGCCGTCCGCTTTCGATTAGCATGGGAAACGCAATCCGATT 1207
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 CGTCTCTTTCCTCATAGAATGCCGTCCGCTTTCGATTAGCATGGGAAACGCAATCCGATT 254
Query 1208 TGTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCTGAAGCAAAAGCTGC 1267
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 255 TGTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCTGAAGCAAAAGCTTC 314
Query 1268 TCTTCAGTCAGATATTGAACGGTTCATTAACGATAAGATCATAGGGGCAGATACGGTGAT 1327
|||||| |||||||||||||| ||||||||||| || |||||||| |||||||| |||||
Sbjct 315 TCTTCACTCAGATATTGAACGTTTCATTAACGAGAAAATCATAGGTGCAGATACAGTGAT 374
Query 1328 AGTCAAACATGCTGTTACTAAAATCAGAGACGGTGATGTCCTTCTGACCTATGGATCTCC 1387
|||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||| |
Sbjct 375 AGTCGAACATGCTGTCACTAAAATAAGAGACGGTGATGTCCTTCTGACCTACGGATCTTC 434
Query 1388 CACGG-CTGTTGAGATGGTATTATTACATGCACATGAACTCAGGAAAAAGTTTCGTGTCT 1446
||| | | |||||||| ||||| | ||||||||||||||| ||||||||||||||||||
Sbjct 435 CACTGTCA-TTGAGATGATATTAGTGCATGCACATGAACTCGGGAAAAAGTTTCGTGTCT 493
Query 1447 TGGTGGTGGATTCTCGTCCAAAGCTTGAAGGGCAGCTACTGCTTCGTAGATTGATCAAAC 1506
| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 494 TTGTGGTGGATTCTCGACCAAAGCTTCAAGGGAAGCTACTGCTTCGTAGATTGATCAAAC 553
Query 1507 GAGGCATTAACTGTACATACACTCATATAAATGCCATTTCATATATCATGCACGAAGTCA 1566
|||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct 554 GAGGCATTAACTGTACATACACTCATATAACTGCCATATCATATATCATGCACCAAGTCA 613
Query 1567 CCAAAGTGTTTTTGGGCGCCTCATCAGTTTTGTCTAACGGAACAGTTTACTCGAGGGTTG 1626
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 614 CCAAAGTGTTTTTGGGCGCCTCATCAGTTTTTTCTAACGGAACAGTTTACTCAAGGGTTG 673
Query 1627 GGACTGCTTGTGTTGCAATGGTTGCAAATGCATTCCGTGTTCCTGTGCTTGTATGTTGCG 1686
| |||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||
Sbjct 674 GCACTGCTTGTGTTGCAATGGTGGCTAATGCTTTCCGTGTTCCTGTGCTTGTTTGTTGCG 733
Query 1687 AAGCCTACAAGTTCCATGAGAGGGTGCAATTGGATT---CAATATGCTCCAATGAGCTCG 1743
||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||
Sbjct 734 AAGCCTATAAGTTCCATGAGAAGGTGCAGTTGGATTATTCAATATGCTCCAATGAGCTCG 793
Query 1744 GTGATCCAAATGCTATTTCAAAAGTTCATGGAAGAGAAGACATAAACTACTTAGATGGCT 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 794 GTGATCCAAATGCTATTTCAAAAGTTCATGGAAGAGAAGACATAAACTACTTAAATGGCT 853
Query 1804 TGACCAACAACGCAAACCTGCAGTTTTTGAACTTGATGTATGATGCTACACCTTCAGATT 1863
|||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 854 TGACCAACAATGCAAAGCTGAAGTTTCTGAACTTGATGTATGATGCTACACCTTCAGATT 913
Query 1864 ACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGCGTGCCTGTCATCG 1923
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 914 ACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGTGTGCCTGTCATCG 973
Query 1924 TGAGAGAATATCAGAAAGAACACTTGCTT 1952
| |||||||||||||||||||||||||||
Sbjct 974 TAAGAGAATATCAGAAAGAACACTTGCTT 1002
> AT5G38630.1 | Symbols: ACYB-1, CYB-1 | cytochrome B561-1 | chr5:15465992-15468185
FORWARD LENGTH=1516
Length=1516
Score = 641 bits (347), Expect = 0.0
Identities = 387/406 (95%), Gaps = 4/406 (1%)
Strand=Plus/Minus
Query 1895 GGTACCTCCCACAAGCGTGCCTGTCATCGTGAGAGAATATCAGAAAGAACACTTGCTTGT 1954
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 GGTACCTCCCACAAGTGTGCCTGTCATCGTGAGAGAATATCAGAAAGAACACTTGCTTGT 1355
Query 1955 CTAAGCAAAATTCGTTTTTGCGAAAGCTCTTCTTCTCCAACCCCTTCCTCTAGCTCAGGC 2014
||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1354 CTAAGCAAAGCTCATTTTTGCGAAAGCTCTTCTTCTCCAACCCCCTCCTCTAGCTCAGGC 1295
Query 2015 TCTTCTCGTCACAACCC-GCATAGAATAACTACTGGCACTGCCT-CCCTCATCCGCTTCT 2072
||||||| ||||||||| | ||||||||||||| |||||||||| |||||||||||||||
Sbjct 1294 TCTTCTCATCACAACCCAG-ATAGAATAACTACCGGCACTGCCTCCCCTCATCCGCTTCT 1236
Query 2073 TTTCCTGAGTACCGGATTCA-tttttttGGCCTTGACATGTTTTTAGTAACTTTTGACTC 2131
||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||
Sbjct 1235 TTTCCTGAGTACCGGGTTCATTTTTTTTGGCCTTGACTTGTTTTTAGAAACTTTTGACTC 1176
Query 2132 TGTGAAGAGTGCGATTCATCATCCGCCTCTCCGGGAAGATTTTATCGATATCGGTGATGt 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175 TGTGAAGAGTGCGATTCATCATCCGCCTCTCCGGGAAGATTTTATCGATATCGGTGATGT 1116
Query 2192 ttttttttGTCTGTGATGTATGAGTGAGGCTTCTCTTACTCTCCCTTCTCATAGAGTTTG 2251
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1115 TTTTCTTTGTCTGTGATGTATGAGTGAGGCTTCTCTTACTCTCCCTTCTCATGGAGGTTG 1056
Query 2252 ATACAAATCTTTCTCAGATTCTATGCCAAtttttttttGGTTCAGT 2297
|||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1055 ATACAAATCTTTCTCAGATTCTATGCCAATTTTTGTTGGGTTCAGT 1010
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114005437695
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5