BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494134 Length=468 Score E Sequences producing significant alignments: (Bits) Value AT5G38435.1 | Symbols: SPH8 | S-protein homologue 8 | chr5:1538... 704 0.0 AT5G38440.1 | Symbols: | Plant self-incompatibility protein S1... 429 1e-119 AT2G23142.1 | Symbols: | Plant self-incompatibility protein S1... 122 2e-27 > AT5G38435.1 | Symbols: SPH8 | S-protein homologue 8 | chr5:15388045-15388656 FORWARD LENGTH=612 Length=612 Score = 704 bits (381), Expect = 0.0 Identities = 432/456 (95%), Gaps = 5/456 (1%) Strand=Plus/Plus Query 1 GCAATGCATAGTCTCTCGTGGTTTCTGCTCGTCATTGGATTGTCCGTAGGGTTGAGTAAC 60 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct 33 GCAATGCATAGTCTCTCGTGGTTTCTCCTCGTCATTGGATTATCCGTAGGGTTGAGTAGC 92 Query 61 GCAAAGTGGAATGAGAAAAACGCTGTCTTCTTTAAGAATTCTCTTGGTCGGAACAAAGTC 120 | ||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| Sbjct 93 GGAAAGTGGAATGAGAAAAACTCTGTCATCTTTACGAATTCTCTTGGTCGGAACAAAGTC 152 Query 121 TTGAAAGTAAATTGCATATCAAATGACGACAATCTAGGCTTCCACTTTTTGCGTCC-TGG 179 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct 153 TTGAAAGTAAATTGCATATCAAATGATGACAATCTAGGCTTCCACTTTTTGCG-CCATGG 211 Query 180 AGAAACCTACGATTTTAGTTTCCACGATAGTCTTTTCAAATCAGAATTCTATTGTGACCT 239 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212 ACAAACCTACGATTTTAGTTTCCACGATAGTCTTTTCAAATCAGAATTCTATTGTGACCT 271 Query 240 ATGGCAAGGCCCTGATTTCAAGTTGCATGCATCATTTATGGCATATGAAGGTGGTGGTTT 299 ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 272 ATGGCAAGGCCCTAATTTCAAGTTGCATGCAGCATTTACGGCATATGAAGGTGGTGGTTT 331 Query 300 CATAGTTCATTATGGTAAAAAGAACTTTTGGGATGCTAGAGAAGACGGGATCTATTTCAC 359 |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| Sbjct 332 GATAGTTCATTATGGTAAAAAGAACTTTTGGGATGTTAGAGATGATGGGATCTATTTCAC 391 Query 360 CCATGGCCAAAAAATGCCCAAGTTAGAGTATAAGTGGAAATAATAATTAACCACTCaaa- 418 |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| Sbjct 392 CCATGGCCAAAAAATGCCCAAGTTAGAGTATACGTGGAAGTAATAATTAATCACTCAAAG 451 Query 419 --aaaaGATGGAATTTAACTCATCTTTTTGTTTTAA 452 |||||||||||||||||||||||||||||||||| Sbjct 452 GGAAAAGATGGAATTTAACTCATCTTTTTGTTTTAA 487 > AT5G38440.1 | Symbols: | Plant self-incompatibility protein S1 family | chr5:15390223-15390624 FORWARD LENGTH=402 Length=402 Score = 429 bits (232), Expect = 1e-119 Identities = 345/398 (87%), Gaps = 13/398 (3%) Strand=Plus/Plus Query 13 CTCTCGTGGTTTCTGCTCGTCATTGGATTGTCCGTAGGGTTGAGTAACGC--A---AA-G 66 |||||||| ||||||||||| |||||||||| | |||| ||||||||||| | || Sbjct 10 CTCTCGTGTTTTCTGCTCGTTATTGGATTGTGCATAGGATTGAGTAACGCAAATTTAATA 69 Query 67 TGGAATGAGAAAAACGCTGTCTTCTTTAAGAATTCTCTTGGTCGGAACAAAGTCTTGAAA 126 ||||||||||||||| |||| ||||| |||| ||| |||||||| ||||| || ||| || Sbjct 70 TGGAATGAGAAAAACACTGTATTCTTCAAGAGTTCCCTTGGTCGAAACAATGTTTTG-AA 128 Query 127 G-TAAATTGCATATCAAATGACGACAATCTAGGCTTCCACTTTTTGCGTCCTGGAGAAAC 185 | | |||||| ||| | || ||||||||||| ||||| |||||||||||||||||||| Sbjct 129 GATTCATTGCACATC--A-GAAGACAATCTAGGTTTCCATTTTTTGCGTCCTGGAGAAAC 185 Query 186 CTACGATTTTAGTTTCCACGATAGTCTTTTCAAATCAGAATTCTATTGTGACCTATGGCA 245 ||| |||||||||||||| |||||| || | | |||||| || || ||||| ||||||| Sbjct 186 CTATGATTTTAGTTTCCATGATAGTATTGTGAGATCAGACTTTTACTGTGAATTATGGCA 245 Query 246 AGGCCCTGATTTCAAGTTGCATGCATCATTTATGGCATATGAAGGTGGTGGTTTCATAGT 305 ||| ||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||| Sbjct 246 AGGGCCTAATTTCAAGTTTCATGCATCATTTATGGCATATCAAGGTGGTGGTCTCATAGT 305 Query 306 TCATTATGGTAAAAAGAACTTTTGGGATGCTAGAGAAGACGGGATCTATTTCACCCATGG 365 ||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct 306 TCATTATGGTAAAAAGAACTTTTGGGATGCTAGAGAAGATGGAATCTATTTCACTCATGG 365 Query 366 CCAAA-AAATGCCCAAGTTAGAGTATAAGTGGAAATAA 402 | ||| ||| |||||||||||||||||||||||||||| Sbjct 366 C-AAAGAAACGCCCAAGTTAGAGTATAAGTGGAAATAA 402 > AT2G23142.1 | Symbols: | Plant self-incompatibility protein S1 family | chr2:9850176-9850619 FORWARD LENGTH=444 Length=444 Score = 122 bits (66), Expect = 2e-27 Identities = 111/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 266 ATGCATCATTTATGGCATATGAAGGTGGTGGTTTCATAGTTCATTATGGTAAAAAGAACT 325 ||||| ||||| ||||||| ||||||| ||| | |||||||| || ||||||||||||| Sbjct 272 ATGCAAGATTTAGGGCATATAAAGGTGGAGGTCTGATAGTTCACTACGGTAAAAAGAACT 331 Query 326 TTTGGGATGCTAGAGAAGACGGGATCTATTTCACCCATGGCCAAA-AAATGCCCAAGTTA 384 ||||||||||||||||||| || || || ||||| ||||| ||| ||| || || ||| Sbjct 332 TTTGGGATGCTAGAGAAGATGGTATTTACTTCACACATGGT-AAAGAAACACCTAAATTA 390 Query 385 GAGTATAAGTGGA 397 |||||||| |||| Sbjct 391 GAGTATAAATGGA 403 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22253727121 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5