BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494156
Length=1322
Score E
Sequences producing significant alignments: (Bits) Value
AT5G38220.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1703 0.0
AT1G66900.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 736 0.0
> AT5G38220.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:15268868-15271353 FORWARD LENGTH=1368
Length=1368
Score = 1703 bits (922), Expect = 0.0
Identities = 1089/1167 (93%), Gaps = 21/1167 (2%)
Strand=Plus/Plus
Query 40 ctcctttttccatcgtcctatcattttctccttcttcttcACCTCAAGATCTC-AAAA-A 97
||||||| |||||||| |||||||||||||||| | ||||||||||||||||| |||| |
Sbjct 1 CTCCTTTCTCCATCGTTCTATCATTTTCTCCTT-TCCTTCACCTCAAGATCTCAAAAACA 59
Query 98 CAAAAAGATAAATCAATCAAAACCTTAGGG-TTTCTTCTAATTTATGTGTGTGATGAT-A 155
|||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||| | |
Sbjct 60 CAAAAAGAGAAATCAATCAAAACCTTAGGGTTTTCTACTAATTTATCTGTGTGATGTTAA 119
Query 156 -AG-A-CA--ATCA---TCATCGTCATGGGAGGAGTAACTTCATCAATCGCAGCAAAATT 207
|| | || |||| || ||||||||||||||||||||||||||||||| ||||||||
Sbjct 120 GAGAATCATCATCATCTTCGTCGTCATGGGAGGAGTAACTTCATCAATCGCTGCAAAATT 179
Query 208 CGCTTTTTTCCCGCCATCACCACCGTCTTACGGATTTGTTTCCGACGTTGACCGATTATA 267
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 180 CGCTTTTTTCCCGCCATCACCACCGTCTTATGGATTTGTTTCCGACGTTGACCGATTATA 239
Query 268 TATAACAGAAGTACCTCGCCGTGATGATGTTGATGTATTGAAGCTAAAGACTCGTCGTGG 327
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 240 CATAACAGAAGTACCTCGCCGTGATGATGTAGATGTATTGAAGCTAAAGACTCGTCGTGG 299
Query 328 TAACGAGATTGTAGCTATTTATATTAAGCATCCTAAAGCTAATGGTACGCTTTTGTACTC 387
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 300 TAACGAGATTGTAGCTATTTATATTAAACATCCTAAAGCTAATGGTACGCTTTTGTATTC 359
Query 388 ACATGGTAACGCTGCTGATTTGGGTCAAATGTTTGAGCTTTTCGTTGAACTTAGTAATCG 447
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 360 ACATGGTAACGCTGCTGATTTGGGTCAAATGTTTGAGCTTTTTATCGAACTTAGTAATCG 419
Query 448 TCTCCGACTTAATCTCATGGGGTATGATTACTCTGGTTATGGTCAGTCTACGGGAAAGGC 507
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 420 TCTCCGACTTAATCTCATGGGGTATGATTACTCTGGTTATGGTCAGTCTACTGGAAAGGC 479
Query 508 AAGTGAATGTAATACATATGCTGATATAGATGCATCATATACCTGCCTCAAGGAACATTA 567
||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 480 AAGTGAATGTAATACCTATGCTGATATAGATGCAGCATATACTTGCCTCAAGGAACATTA 539
Query 568 TGGTGTTAAAGATGATCAACTGATATTATATGGTCAGTCTGTTGGTAGTGGACCAACGAT 627
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TGGTGTAAAAGATGATCAACTGATATTATATGGTCAGTCTGTTGGTAGTGGACCAACGAT 599
Query 628 TGATCTAGCTTCGCGCACGCCTAATTTAAGAGGGGTGGTTTTGCACAGCCCTATTCTGTC 687
|||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||
Sbjct 600 TGATTTAGCTTCACGCACGCCTAATTTGCGAGGAGTGGTTTTGCACAGCCCTATTCTCTC 659
Query 688 TGGGATTAGAGTTTTGTATCCGGTTAAACGTACATATTGGTTTGACATTTACAAGAATAT 747
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 660 TGGGATGAGAGTTTTGTATCCGGTTAAACGTACCTATTGGTTTGACATTTACAAGAATAT 719
Query 748 CGATAAGATCGGTGCAGTGACATGTCCTGTCTTAGTAATCCATGGGACTGCAGATGAAGT 807
|| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGACAAGATCGGTGCAGTTACCTGTCCTGTCTTAGTAATCCATGGGACTGCAGATGAAGT 779
Query 808 GGTTGATTGTTCTCATGGAAAACAGCTTTGGGAACTTTCAAAAGAGAAGTATGAACCTTT 867
|||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct 780 GGTTGATTGTTCTCATGGAAAACAACTTTGGGAACTTTCAAAAGAAAAGTATGAGCCTTT 839
Query 868 ATGGGTATCTGGAGGAGGACACTGCAATCTAGAACTCTATCCAGAGTTCATAAAACATCT 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 ATGGGTATCTGGAGGAGGACACTGCAATCTAGAACTCTATCCAGAGTTCATAAAACATCT 899
Query 928 GAAGAAATTCGTAATCTCGATTTCCAAACCCAAGGGACCAAGAAATGGTTCGAACAAGAC 987
|||||||| |||||| || |||||||| ||||||||||| |||||||||||||||
Sbjct 900 GAAGAAATACGTAATTTCTATTTCCAA------GGGACCAAGAACTGGTTCGAACAAGAC 953
Query 988 TGTAACGACGGATACAACCAAAAACCAGAGTAAGCCTTCAGAGAACGGTCGTTCTGATAC 1047
|| |||||||||| || ||||||| ||||| |||||| |||||||||| ||| |||||||
Sbjct 954 TGCAACGACGGATGCAGCCAAAAAACAGAGCAAGCCTGCAGAGAACGGGCGTGCTGATAC 1013
Query 1048 ATTTCAACTCGGTTGCTGCCTCCCAGAAGTTTCTAGAAACAGCGTAGACAGTCAGCTGGA 1107
|||||||| || || ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1014 GTTTCAACTTGGCTGTTGCCTTCCAGAAGTTTCTAGAAACAGTGTAGACAGTCAGCTGGA 1073
Query 1108 GAAATCTAAGAAGACTAGTAAACCCGAGAAGTCCCGAATGAGCATTGATAGGTTTAGAAG 1167
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1074 GAAATCTAAGAAGACTAGTAAACCCGAGAAGTCTCGTATGAGCATTGATAGGTTTAGAAG 1133
Query 1168 GAAAAAAGGT-CTAGTCTGGTGACATA 1193
|||||||||| | ||||||||||||||
Sbjct 1134 GAAAAAAGGTTC-AGTCTGGTGACATA 1159
Score = 154 bits (83), Expect = 2e-36
Identities = 98/105 (93%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 1218 TTGTGTATGTATTTTCTGATAGAAACAGATCAAACTCAAAAGTCTTGATTTCATATTTGG 1277
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265 TTGTGTATGTATTTTCTAATAGAAACAGATCAAACTCAAAAGTCTTGATTTCATATTTGG 1324
Query 1278 TTGTAACTTTTTCATGGTACAAATGCT-GTAATGACTGACTAGTT 1321
|||||||||| |||||||||||| || ||||| |||||| ||||
Sbjct 1325 TTGTAACTTTGTCATGGTACAAAA-CTTGTAATCACTGACAAGTT 1368
> AT1G66900.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:24959334-24961616 FORWARD LENGTH=1398
Length=1398
Score = 736 bits (398), Expect = 0.0
Identities = 663/789 (84%), Gaps = 25/789 (3%)
Strand=Plus/Plus
Query 165 TCATCGTCATGGGAGGAGTAACTTCATCAATCGCAGCAAAATTCGCTTT-TTTCCCGCCA 223
||||| |||||||||| || || ||||| ||||| || ||||| ||||| ||| || |||
Sbjct 211 TCATCATCATGGGAGGTGTTACATCATCGATCGCTGCTAAATTTGCTTTCTTT-CCACCA 269
Query 224 TCACCACCGTCTTACGGA-TTTGTTTCCGAC----G-T----T-GACCGATTATATATAA 272
| |||||||| || || || | ||||| | | | || || ||||| || |
Sbjct 270 ACGCCACCGTCGTA-TGAGGTTATAGCCGACGATAGCTGCGGTGGA-CGTTTATACAT-A 326
Query 273 CAGAAG-TACCTCGCCGTGATGATGTTGATGTATTGAAGCTAAAG-ACTCGTCGTGGTAA 330
| | || | ||||||||||||||||||||| |||||||||| | |||||| |||||||
Sbjct 327 CCGGAGATTCCTCGCCGTGATGATGTTGATATATTGAAGCT-TCGTACTCGTTGTGGTAA 385
Query 331 CGAGATTGTAGCTATTTATATTAAGCATCCTAAAGCTAATGGTACGCTTTTGTACTCACA 390
||||| || ||| ||||| | || ||| | ||||||||||| ||||||||||| || ||
Sbjct 386 TGAGATCGTTGCTGTTTATGTGAAACATTCAAAAGCTAATGGCACGCTTTTGTATTCTCA 445
Query 391 TGGTAACGCTGCTGATTTGGGTCAAATGTTTGAGCTTTTCGTTGAACTTAGTAATCGTCT 450
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct 446 TGGTAACGCTGCTGATTTGGGTCAAATGTTTGAGCTTTTCGTTGAGCTTAGCAATCGCCT 505
Query 451 CCGACTT-AATCTCATGGGGTATGATTACTCTGGTTATGGTCAGTCTACGGGAAAGGCAA 509
|| | | ||||| ||||||||||||||||||||||||||||||||||| ||| |||| |
Sbjct 506 TCG-CGTCAATCTTATGGGGTATGATTACTCTGGTTATGGTCAGTCTACTGGACAGGCTA 564
Query 510 GTGAATGTAATACATATGCTGATATAGATGCATCATATACCTGCCTCAAGGAACATTATG 569
| || ||||||||||||||||||||||| |||||||||| |||||||||||| | || |
Sbjct 565 GCGAGTGTAATACATATGCTGATATAGAGGCATCATATAAATGCCTCAAGGAAAAGTACG 624
Query 570 GTGTTAAAGATGATCAACTGATATTATATGGTCAGTCTGTTGGTAGTGGACCAACGATTG 629
|||| ||||| |||||||||||| |||||||||| ||||||||||||||||| ||| |||
Sbjct 625 GTGTAAAAGACGATCAACTGATAGTATATGGTCAATCTGTTGGTAGTGGACCTACGGTTG 684
Query 630 ATCTAGCTTCGCGCACGCCTAATTTAAGAGGGGTGGTTTTGCACAGCCCTATTCTGTCTG 689
|||||||||| ||||| ||||| |||||||| |||||||| || | ||||| |||||||
Sbjct 685 ATCTAGCTTCACGCACACCTAACTTAAGAGGCGTGGTTTTACAGTGTCCTATCCTGTCTG 744
Query 690 GGATTAGAGTTTTGTATCCGGTTAAACGTACATATTGGTTTGACATTTACAAGAATATCG 749
|||| || ||||||||||| || ||| ||||||||||||||||||||||||||||||| |
Sbjct 745 GGATGAGGGTTTTGTATCCTGTGAAATGTACATATTGGTTTGACATTTACAAGAATATTG 804
Query 750 ATAAGATCGG-TGCAGTGACATGTCCTGTCTTAGTAATCCATGGGACTGCAGATGAAGTG 808
| |||||||| | |||| || |||||||| |||||||||||||| ||||| ||||||||
Sbjct 805 ACAAGATCGGCT-CAGTTACCTGTCCTGTATTAGTAATCCATGGTACTGCGGATGAAGTA 863
Query 809 GTTGATTGTTCTCATGGAAAACAGCTTTGGGAACTTT-CAAAAGAGAAGTATGAACCTTT 867
|||||||| ||||| ||||||| ||| |||||||| |||| |||||||||||||||||
Sbjct 864 GTTGATTGGTCTCACGGAAAACGGCTCTGGGAACTCAGCAAA-GAGAAGTATGAACCTTT 922
Query 868 ATGGGTATCTGGAGGAGGACACTGCAATCTAGAACTCTATCCAGAGTTCATAAAACATCT 927
||| || |||||| |||||||| | || |||||||||||||| ||||| | ||||||
Sbjct 923 GTGGATAAGTGGAGGTGGACACTGTGACCTTGAACTCTATCCAGATTTCATCAGACATCT 982
Query 928 GAAGAAATT 936
|||||||||
Sbjct 983 GAAGAAATT 991
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65059906320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5