BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494160
Length=1399
Score E
Sequences producing significant alignments: (Bits) Value
AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-li... 2230 0.0
AT1G66860.1 | Symbols: | Class I glutamine amidotransferase-li... 939 0.0
> AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-like
superfamily protein | chr5:15256276-15258755 FORWARD LENGTH=1699
Length=1699
Score = 2230 bits (1207), Expect = 0.0
Identities = 1337/1401 (95%), Gaps = 4/1401 (0%)
Strand=Plus/Plus
Query 1 AttttttttgttatttgattttttcattttCTGGGT-TAAATCAAATGGGAACAATAGAG 59
||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||
Sbjct 64 ATTTTTTTTGTTATTTG-CTTTTTCATTTTCTAGGTACAAATCAAATGGGAACAATAGAT 122
Query 60 ATGGATCCAAAACTGAATGATCTCTCTCAAATCCTCCCTCGTGTCCTCGTCGTCTCTAGA 119
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 123 ATGGATCCAAAGTTGAATGATCTCTCTCAAATCCTCCCTCGTGTCCTCGTCGTATCTAGA 182
Query 120 CGCACCGTTCGTAAAAACAAATTCGTCGATTTCGTTGGTGAATATCATCTTGATTTGATA 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 183 CGCACCGTTCGTAAAAACAAATTCGTCGATTTCGTTGGTGAATACCATCTTGATTTGATA 242
Query 180 GTACGTTACGGATGTGTACCAGTGATTGTACCAAGAGTAACTGGTGTTCACATGTTACTT 239
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 243 GTACGTTACGGATGTGTACCAGTGATTGTACCAAGAGTAACGGGTGTTCACATGTTGCTT 302
Query 240 GAGAGCTTTAAACCAATTCATGGAGTTTTACTTTGTGAAGGAGAAGATATTGATCCTTCT 299
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 GAGAGTTTTAAACCAATACATGGAGTTTTACTTTGTGAAGGAGAAGATATTGATCCTTCT 362
Query 300 CTTTATGAATCTGAAATATCTTCTCTTTCTCCTGAAGAGCTTCAAGAGATTAGAGAAACA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 CTTTATGAATCTGAAATATCTTCTCTTTCTCCTGAAGAGCTTCAAGAGATTAGAGAAACA 422
Query 360 CATGCTAGTGATACAGCTATTGATAAAGAGAAAGATTCCATTGAGTTAGGTCTTGCTAAG 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 423 CATGCTAGTGATACAGCTATTGATAAAGAGAAAGATTCTATTGAGTTAGGTCTTGCTAAG 482
Query 420 CTTTGTCTTGAACAGAACATTCCTTACTTAGGAATCTGCAGAGGATCACAAATTTTGAAT 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 483 CTTTGTCTTGAACAGAACATTCCTTACTTAGGAATCTGTAGAGGATCACAAATTTTGAAT 542
Query 480 GTTGCTTGTGGTGGGACTCTTTATCTAGATTTAGAGAAAGAACTAACGAATAAGTTACCG 539
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 543 GTTGCTTGTGGTGGGACTCTTTATCTAGATTTAGAGAAAGAGCTAACGAATAAGTTACCA 602
Query 540 GAAGAACGAAGAACGAAACATATCGATTATGATAACTATGATGGACATAGACATGTTGTG 599
|||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct 603 GAAGAACGAAGAACGATGCATATCGATTATGATAATTATGATGGTCATAGACATGTTGTG 662
Query 600 AGGATTGTTGAGAACAGTCCACTTCATTCTTGGTTTAAAGATTCACTGGATGGTGATAAA 659
||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |||
Sbjct 663 AGGATTGTTGAGAACAGTCCACTTCATTCCTGGTTTAAAGATTCATTAGATGGTGA-AAA 721
Query 660 -ATGGAGATTTTAGTTAATAGTTATCATCATCAAGGTGTTAAGAGATTGGCACAGAGATT 718
||||||||||| |||||||||||||| ||||||||||| |||||| ||||||| |||||
Sbjct 722 TATGGAGATTTTGGTTAATAGTTATCACCATCAAGGTGTGAAGAGACTGGCACAAAGATT 781
Query 719 TGTGCCAATGGCGTTTGCTTCTGATGGATTAATGGAAGGTTTTTACGATCCGGATGCGTA 778
|||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 782 TGTGCCAATGGCTTTTGCTGCTGATGGGTTAATGGAAGGTTTTTACGATCCGGATGCGTA 841
Query 779 TAATCCCGAAGAAGGGAAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAGACA 838
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 TAATCCTGAAGAAGGGAAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAGACA 901
Query 839 ACATGATCTTGATGAGTTTGATTATCCTGGTTGTCCTGCTGCTTATCAGGAGTTTGCAAA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 ACATGATCTTGATGAGTTTGATTATCCTGGTTGTCCTGCTGCTTATCAGGAGTTTGCAAA 961
Query 899 GGCGGTGATTGCGTATCAGAAGAAGCTGAATAGCTCATTGTCGGTTCCAAAGACATTGAA 958
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 962 GGCGGTGATTGCGTACCAGAAGAAGCTGAATAGCTCATTGTCTGTTCCAAAGACATTGAA 1021
Query 959 GCTTGATAGTGAAATGGAGAATAAAAGAAAGATACTTGTTAGGAGTTTCTCACTTGCTAA 1018
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1022 GCTTGATAGTGAAATGGAGAATAAAAGAAAGATGCTTGTTAGGAGTTTCTCACTTGCTAA 1081
Query 1019 GTATATGTACGTTAGAGGTTCTCCTGGGAAGAACTCATCAAAAGAATCAGAACTCGAAGT 1078
||||||||| |||||||| | || ||||||||| ||||||||||||||||||| |||||
Sbjct 1082 GTATATGTATGTTAGAGGAGCACCAGGGAAGAACCCATCAAAAGAATCAGAACTTGAAGT 1141
Query 1079 TGGAGCCGAGTTTCTTGAGTCCAACACGGCGCTGAGCGCGGAGCAAGAGATGAGGCTGAA 1138
|||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1142 TGGAGCCGAGTTCCTTGAGTCGAACACGGCGCTAAGCGCAGAGCAAGAGATGAGGCTGAA 1201
Query 1139 GGAGATGGGAGCGACGGTGAGAAACGGAGGATCATATATGAAAAAGTTGAAAGTAGACGA 1198
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1202 GGAGATGGGAGCGACGGTGAGGAACGGAGGATCATATATGAAAAAGTTGAAAGTGGACGA 1261
Query 1199 GGATAAGCAGAGGATGGCGAGGAACATGATGAACAAGATGAACATAGAGCAACTCTCAGA 1258
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1262 GGATAAGCAGAGGATGGCGAGGAACATGATGAAAAAGATGAACATAGAGCAACTCTCAGA 1321
Query 1259 GCTTATGGCATTTTATCATTTGATGGGTAATATCTGTGGAGAAGTTTTGGAGAGAAAGCT 1318
||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct 1322 GCTTATGGCGTTTTATCATTTGATGGGTAATATATGTGGAGAGGTTTTGGACCGAAAGCT 1381
Query 1319 TCAAGGAAATGTCAATGAATGCTTGAGGGATCTGTGAGTTTCATATGAATGAAACGCATG 1378
|||||| ||||||||||||||||||||||| || |||||||||| |||||||| ||||||
Sbjct 1382 TCAAGGCAATGTCAATGAATGCTTGAGGGACCTATGAGTTTCATGTGAATGAATCGCATG 1441
Query 1379 CAGAGGATGCTTTAAGAAAAA 1399
|||||||||||||||| ||||
Sbjct 1442 CAGAGGATGCTTTAAGGAAAA 1462
> AT1G66860.1 | Symbols: | Class I glutamine amidotransferase-like
superfamily protein | chr1:24942188-24944497 FORWARD LENGTH=1499
Length=1499
Score = 939 bits (508), Expect = 0.0
Identities = 1026/1273 (81%), Gaps = 48/1273 (4%)
Strand=Plus/Plus
Query 73 TGAATGATCTCTCTCAAATCCTCCCTCGTGTCCTCGTCGTCTCTAGACGCAC-CGTTCGT 131
||||||||||||||||| |||||||||| ||||| || |||||||||||||| | ||||
Sbjct 69 TGAATGATCTCTCTCAAGTCCTCCCTCGCGTCCTTGTTGTCTCTAGACGCACTC-TTCGC 127
Query 132 AAAAACAAATTCGTCGATTTCGTTGGTGAATATCATCTTGAT-TTGATAGTACG-TTACG 189
|| |||||||| || |||||||||||||| || ||||||||| || ||||| || |||
Sbjct 128 AAGAACAAATTTGTTGATTTCGTTGGTGAGTACCATCTTGATCTT-ATAGT-CGAGAACG 185
Query 190 GATG-TGTACCAGTGATTGTACCAAGAGTAACTGGTGTTCACATGTTACTTGAGAGCTTT 248
| || |||||| |||||||| ||| |||| |||||||||||| |||||| ||||||||
Sbjct 186 G-TGCTGTACCGGTGATTGTCCCACGAGTGGCTGGTGTTCACAAGTTACTAGAGAGCTTC 244
Query 249 AAACCAATTCATGGAGTTTTACTTTGTGAAGGAGAAGATATTGATCCTTCTCTTTATGAA 308
|| || || ||||||||| |||| |||||||||||||| || || ||||||||||| ||
Sbjct 245 AAGCCCATCCATGGAGTTCTACTCTGTGAAGGAGAAGACATCGACCCTTCTCTTTACGAG 304
Query 309 TCTGAAATATCTTCTCTTTCTCCTGAAGAGCTTC-AAGAGATT-AGAGAAACACATGCTA 366
|| |||||||| || ||||| ||| |||| | || | |||||| || ||||||| || |
Sbjct 305 TCCGAAATATCGTCCCTTTCACCTCAAGAAC-TCGACGAGATTCGGA-AAACACACGCAA 362
Query 367 GTGATACAGCTATTGATAAAGAGAAAGATTCCATTGAGTTAGGTCTTGCTAAGCTTTGTC 426
||||||||||||| || ||||| ||||| || |||||||| | || || ||||| || |
Sbjct 363 GTGATACAGCTATCGACAAAGAAAAAGACTCTATTGAGTTTGCCCTCGCAAAGCTCTGCC 422
Query 427 TTGAACAGAACATTCCTTACTTAGGAATCTGCAGAGGATCACAAATTTTGAATGTTGCTT 486
||||||| ||||||||||||||||| || || ||||| ||||| |||||||||||||||
Sbjct 423 TTGAACAAAACATTCCTTACTTAGGGATTTGTAGAGGTTCACAGGTTTTGAATGTTGCTT 482
Query 487 GTGGTGGGACTCTTTATCTAGATTTAGAGAAAGAACTAACGAAT-AA-GTTACCGGAAGA 544
||||||| | |||||||| ||| || |||||||| | ||| || || ||| || || ||
Sbjct 483 GTGGTGGAAGTCTTTATCAAGACTTGGAGAAAGAGGTCACG-ATCAAGGTT-CCCGAGGA 540
Query 545 ACGA-AGAACGAAA-CATATCGATTATGATAACTATGATGGACATAGACATGTTGTGAGG 602
|| | | || |||| ||||| ||||||||| |||||||||| ||||||||| |||| |
Sbjct 541 AC-ATA-AAAGAAACCATATAGATTATGATGACTATGATGGTTATAGACATGAGGTGAAG 598
Query 603 ATTGTTGAGAACAGTCCAC-TT-CATTCTTGGTTTAAAGATTCACTGGATGGTGATAAA- 659
|| || | ||||| || | || ||| ||||| |||||||| | |||| || |||
Sbjct 599 ATAGTAAAAAACAG-CC-CTTTGCATAAATGGTTCAAAGATTCTTTAGATGAAGA-AAAG 655
Query 660 ATGGAGATTTTAGTTAATAGTTATCATCATCAAGGTGTTAAGAGATTGGCACAGAGATTT 719
|||||||| || || || |||||||| || ||||| |||||||||||||| || ||||||
Sbjct 656 ATGGAGATCTTGGTCAACAGTTATCACCACCAAGGGGTTAAGAGATTGGCGCAAAGATTT 715
Query 720 GTGCCAATGGCGTTTGCTTCTGATGGATTAATGGAAGGTTTTTACGATCCGGATGCGTAT 779
||||||||||| |||||| |||||||||| || ||||| ||||| ||||| ||| |||
Sbjct 716 GTGCCAATGGCTTTTGCTCCTGATGGATTGATTGAAGGGTTTTATGATCCTGATATGTAC 775
Query 780 AATCCCGAAGAAGGG-AAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAGACA 838
||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||| |
Sbjct 776 AATCCTGAAG-AGGGAAAGTTCCTAATGGGTTTACAGTTTCATCCAGAGAGAATGAGG-A 833
Query 839 ACA-TGATCTTGATGAGTTTGATTATCC-TGGTTGTCCTGCTGCTTATCAGGAGTTTGCA 896
| | || | ||||| ||||||| ||| ||||||||||| |||||||||||| ||||||
Sbjct 834 AGAATGGTAGCGATGAATTTGATT-TCCCTGGTTGTCCTGTTGCTTATCAGGAATTTGCA 892
Query 897 AAGGCGGTGATTGCGTATCAGAAGAAGCTGAATAGCT-CATTGTCGGTTCCAAAGACATT 955
|| || |||||||| | ||| |||||| ||||||| | | ||||| ||||| |||| |||
Sbjct 893 AAAGCAGTGATTGCATGTCAAAAGAAGGTGAATAGTTTC-TTGTCTGTTCCTAAGAAATT 951
Query 956 G-AAGCTTGATAGTGAAATGGAGAATAAAAGAAAGATACTTGTTAGGAGTTTCTCACTTG 1014
| || || || ||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct 952 GGAA-CTCAATCCAGAAATGGAGAACAAAAGAAAGATACTTGTCAGGAGCTTCTCGCTTG 1010
Query 1015 CTAAGTATATGTACGTTAGAGGTTC-TCC-TGGGAAGAACTCA-TCAAAAGAATCAGAAC 1071
| | || ||||||| ||| | | | | | | |||||| || || | |||||||||||
Sbjct 1011 CGAGGTCTATGTACACCAGATCT-CATTCGTTG-AAGAAC-CAATCCACAGAATCAGAAC 1067
Query 1072 TCGAAGTTGGAGCCGAGTTTCTTGAGTCCAACACGGCGCTGAGCGCGGAGCAAGAGATGA 1131
| ||||||||||| |||||||||||||| || || || || || | | ||||||||||
Sbjct 1068 TTGAAGTTGGAGCTGAGTTTCTTGAGTCAAATACCGCTCTAAGTGTACAACAAGAGATGA 1127
Query 1132 GGCTGAAGGAGATGGGAGCGACGGTGAGAAACGGAGGATCATATATGAAAAAG-TTGAAA 1190
|| | || |||||||||||||| |||| || || ||||||| || | ||||| || |
Sbjct 1128 GGTTAAAAGAGATGGGAGCGACTATGAGGAATGGTGGATCATTTACGGAAAAGCTT-AG- 1185
Query 1191 G-TAGACGAGGATAAGCAGAGGATGGCGAGGAACATGATGAACAAGATGAACATAGAGCA 1249
| | || || | |||||||||| ||| | |||||| ||||| || |||||||| ||||
Sbjct 1186 GCTTGATGAAAAGAAGCAGAGGAAGGCTATGAACATAATGAAGAACATGAACATTGAGCG 1245
Query 1250 ACTCTCAGAGCTTATGGCATTT-TATCATTTGATGGGTAATATCTGTGGAGAAGTTTTGG 1308
|||||| ||||| ||||| ||| || || |||||||| || |||| | | || || ||||
Sbjct 1246 ACTCTCTGAGCTCATGGC-TTTCTACCACTTGATGGGGAAGATCTCTAGTGAGGTGTTGG 1304
Query 1309 AGAGAAAGCTTCA 1321
|||||||||||||
Sbjct 1305 AGAGAAAGCTTCA 1317
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68925348285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5