BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494160 Length=1399 Score E Sequences producing significant alignments: (Bits) Value AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-li... 2230 0.0 AT1G66860.1 | Symbols: | Class I glutamine amidotransferase-li... 939 0.0 > AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr5:15256276-15258755 FORWARD LENGTH=1699 Length=1699 Score = 2230 bits (1207), Expect = 0.0 Identities = 1337/1401 (95%), Gaps = 4/1401 (0%) Strand=Plus/Plus Query 1 AttttttttgttatttgattttttcattttCTGGGT-TAAATCAAATGGGAACAATAGAG 59 ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| Sbjct 64 ATTTTTTTTGTTATTTG-CTTTTTCATTTTCTAGGTACAAATCAAATGGGAACAATAGAT 122 Query 60 ATGGATCCAAAACTGAATGATCTCTCTCAAATCCTCCCTCGTGTCCTCGTCGTCTCTAGA 119 ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 123 ATGGATCCAAAGTTGAATGATCTCTCTCAAATCCTCCCTCGTGTCCTCGTCGTATCTAGA 182 Query 120 CGCACCGTTCGTAAAAACAAATTCGTCGATTTCGTTGGTGAATATCATCTTGATTTGATA 179 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 183 CGCACCGTTCGTAAAAACAAATTCGTCGATTTCGTTGGTGAATACCATCTTGATTTGATA 242 Query 180 GTACGTTACGGATGTGTACCAGTGATTGTACCAAGAGTAACTGGTGTTCACATGTTACTT 239 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 243 GTACGTTACGGATGTGTACCAGTGATTGTACCAAGAGTAACGGGTGTTCACATGTTGCTT 302 Query 240 GAGAGCTTTAAACCAATTCATGGAGTTTTACTTTGTGAAGGAGAAGATATTGATCCTTCT 299 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 303 GAGAGTTTTAAACCAATACATGGAGTTTTACTTTGTGAAGGAGAAGATATTGATCCTTCT 362 Query 300 CTTTATGAATCTGAAATATCTTCTCTTTCTCCTGAAGAGCTTCAAGAGATTAGAGAAACA 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 CTTTATGAATCTGAAATATCTTCTCTTTCTCCTGAAGAGCTTCAAGAGATTAGAGAAACA 422 Query 360 CATGCTAGTGATACAGCTATTGATAAAGAGAAAGATTCCATTGAGTTAGGTCTTGCTAAG 419 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 423 CATGCTAGTGATACAGCTATTGATAAAGAGAAAGATTCTATTGAGTTAGGTCTTGCTAAG 482 Query 420 CTTTGTCTTGAACAGAACATTCCTTACTTAGGAATCTGCAGAGGATCACAAATTTTGAAT 479 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 483 CTTTGTCTTGAACAGAACATTCCTTACTTAGGAATCTGTAGAGGATCACAAATTTTGAAT 542 Query 480 GTTGCTTGTGGTGGGACTCTTTATCTAGATTTAGAGAAAGAACTAACGAATAAGTTACCG 539 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 543 GTTGCTTGTGGTGGGACTCTTTATCTAGATTTAGAGAAAGAGCTAACGAATAAGTTACCA 602 Query 540 GAAGAACGAAGAACGAAACATATCGATTATGATAACTATGATGGACATAGACATGTTGTG 599 |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct 603 GAAGAACGAAGAACGATGCATATCGATTATGATAATTATGATGGTCATAGACATGTTGTG 662 Query 600 AGGATTGTTGAGAACAGTCCACTTCATTCTTGGTTTAAAGATTCACTGGATGGTGATAAA 659 ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||| Sbjct 663 AGGATTGTTGAGAACAGTCCACTTCATTCCTGGTTTAAAGATTCATTAGATGGTGA-AAA 721 Query 660 -ATGGAGATTTTAGTTAATAGTTATCATCATCAAGGTGTTAAGAGATTGGCACAGAGATT 718 ||||||||||| |||||||||||||| ||||||||||| |||||| ||||||| ||||| Sbjct 722 TATGGAGATTTTGGTTAATAGTTATCACCATCAAGGTGTGAAGAGACTGGCACAAAGATT 781 Query 719 TGTGCCAATGGCGTTTGCTTCTGATGGATTAATGGAAGGTTTTTACGATCCGGATGCGTA 778 |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 782 TGTGCCAATGGCTTTTGCTGCTGATGGGTTAATGGAAGGTTTTTACGATCCGGATGCGTA 841 Query 779 TAATCCCGAAGAAGGGAAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAGACA 838 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 842 TAATCCTGAAGAAGGGAAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAGACA 901 Query 839 ACATGATCTTGATGAGTTTGATTATCCTGGTTGTCCTGCTGCTTATCAGGAGTTTGCAAA 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 902 ACATGATCTTGATGAGTTTGATTATCCTGGTTGTCCTGCTGCTTATCAGGAGTTTGCAAA 961 Query 899 GGCGGTGATTGCGTATCAGAAGAAGCTGAATAGCTCATTGTCGGTTCCAAAGACATTGAA 958 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 962 GGCGGTGATTGCGTACCAGAAGAAGCTGAATAGCTCATTGTCTGTTCCAAAGACATTGAA 1021 Query 959 GCTTGATAGTGAAATGGAGAATAAAAGAAAGATACTTGTTAGGAGTTTCTCACTTGCTAA 1018 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1022 GCTTGATAGTGAAATGGAGAATAAAAGAAAGATGCTTGTTAGGAGTTTCTCACTTGCTAA 1081 Query 1019 GTATATGTACGTTAGAGGTTCTCCTGGGAAGAACTCATCAAAAGAATCAGAACTCGAAGT 1078 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| ||||| Sbjct 1082 GTATATGTATGTTAGAGGAGCACCAGGGAAGAACCCATCAAAAGAATCAGAACTTGAAGT 1141 Query 1079 TGGAGCCGAGTTTCTTGAGTCCAACACGGCGCTGAGCGCGGAGCAAGAGATGAGGCTGAA 1138 |||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 1142 TGGAGCCGAGTTCCTTGAGTCGAACACGGCGCTAAGCGCAGAGCAAGAGATGAGGCTGAA 1201 Query 1139 GGAGATGGGAGCGACGGTGAGAAACGGAGGATCATATATGAAAAAGTTGAAAGTAGACGA 1198 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 1202 GGAGATGGGAGCGACGGTGAGGAACGGAGGATCATATATGAAAAAGTTGAAAGTGGACGA 1261 Query 1199 GGATAAGCAGAGGATGGCGAGGAACATGATGAACAAGATGAACATAGAGCAACTCTCAGA 1258 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1262 GGATAAGCAGAGGATGGCGAGGAACATGATGAAAAAGATGAACATAGAGCAACTCTCAGA 1321 Query 1259 GCTTATGGCATTTTATCATTTGATGGGTAATATCTGTGGAGAAGTTTTGGAGAGAAAGCT 1318 ||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct 1322 GCTTATGGCGTTTTATCATTTGATGGGTAATATATGTGGAGAGGTTTTGGACCGAAAGCT 1381 Query 1319 TCAAGGAAATGTCAATGAATGCTTGAGGGATCTGTGAGTTTCATATGAATGAAACGCATG 1378 |||||| ||||||||||||||||||||||| || |||||||||| |||||||| |||||| Sbjct 1382 TCAAGGCAATGTCAATGAATGCTTGAGGGACCTATGAGTTTCATGTGAATGAATCGCATG 1441 Query 1379 CAGAGGATGCTTTAAGAAAAA 1399 |||||||||||||||| |||| Sbjct 1442 CAGAGGATGCTTTAAGGAAAA 1462 > AT1G66860.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr1:24942188-24944497 FORWARD LENGTH=1499 Length=1499 Score = 939 bits (508), Expect = 0.0 Identities = 1026/1273 (81%), Gaps = 48/1273 (4%) Strand=Plus/Plus Query 73 TGAATGATCTCTCTCAAATCCTCCCTCGTGTCCTCGTCGTCTCTAGACGCAC-CGTTCGT 131 ||||||||||||||||| |||||||||| ||||| || |||||||||||||| | |||| Sbjct 69 TGAATGATCTCTCTCAAGTCCTCCCTCGCGTCCTTGTTGTCTCTAGACGCACTC-TTCGC 127 Query 132 AAAAACAAATTCGTCGATTTCGTTGGTGAATATCATCTTGAT-TTGATAGTACG-TTACG 189 || |||||||| || |||||||||||||| || ||||||||| || ||||| || ||| Sbjct 128 AAGAACAAATTTGTTGATTTCGTTGGTGAGTACCATCTTGATCTT-ATAGT-CGAGAACG 185 Query 190 GATG-TGTACCAGTGATTGTACCAAGAGTAACTGGTGTTCACATGTTACTTGAGAGCTTT 248 | || |||||| |||||||| ||| |||| |||||||||||| |||||| |||||||| Sbjct 186 G-TGCTGTACCGGTGATTGTCCCACGAGTGGCTGGTGTTCACAAGTTACTAGAGAGCTTC 244 Query 249 AAACCAATTCATGGAGTTTTACTTTGTGAAGGAGAAGATATTGATCCTTCTCTTTATGAA 308 || || || ||||||||| |||| |||||||||||||| || || ||||||||||| || Sbjct 245 AAGCCCATCCATGGAGTTCTACTCTGTGAAGGAGAAGACATCGACCCTTCTCTTTACGAG 304 Query 309 TCTGAAATATCTTCTCTTTCTCCTGAAGAGCTTC-AAGAGATT-AGAGAAACACATGCTA 366 || |||||||| || ||||| ||| |||| | || | |||||| || ||||||| || | Sbjct 305 TCCGAAATATCGTCCCTTTCACCTCAAGAAC-TCGACGAGATTCGGA-AAACACACGCAA 362 Query 367 GTGATACAGCTATTGATAAAGAGAAAGATTCCATTGAGTTAGGTCTTGCTAAGCTTTGTC 426 ||||||||||||| || ||||| ||||| || |||||||| | || || ||||| || | Sbjct 363 GTGATACAGCTATCGACAAAGAAAAAGACTCTATTGAGTTTGCCCTCGCAAAGCTCTGCC 422 Query 427 TTGAACAGAACATTCCTTACTTAGGAATCTGCAGAGGATCACAAATTTTGAATGTTGCTT 486 ||||||| ||||||||||||||||| || || ||||| ||||| ||||||||||||||| Sbjct 423 TTGAACAAAACATTCCTTACTTAGGGATTTGTAGAGGTTCACAGGTTTTGAATGTTGCTT 482 Query 487 GTGGTGGGACTCTTTATCTAGATTTAGAGAAAGAACTAACGAAT-AA-GTTACCGGAAGA 544 ||||||| | |||||||| ||| || |||||||| | ||| || || ||| || || || Sbjct 483 GTGGTGGAAGTCTTTATCAAGACTTGGAGAAAGAGGTCACG-ATCAAGGTT-CCCGAGGA 540 Query 545 ACGA-AGAACGAAA-CATATCGATTATGATAACTATGATGGACATAGACATGTTGTGAGG 602 || | | || |||| ||||| ||||||||| |||||||||| ||||||||| |||| | Sbjct 541 AC-ATA-AAAGAAACCATATAGATTATGATGACTATGATGGTTATAGACATGAGGTGAAG 598 Query 603 ATTGTTGAGAACAGTCCAC-TT-CATTCTTGGTTTAAAGATTCACTGGATGGTGATAAA- 659 || || | ||||| || | || ||| ||||| |||||||| | |||| || ||| Sbjct 599 ATAGTAAAAAACAG-CC-CTTTGCATAAATGGTTCAAAGATTCTTTAGATGAAGA-AAAG 655 Query 660 ATGGAGATTTTAGTTAATAGTTATCATCATCAAGGTGTTAAGAGATTGGCACAGAGATTT 719 |||||||| || || || |||||||| || ||||| |||||||||||||| || |||||| Sbjct 656 ATGGAGATCTTGGTCAACAGTTATCACCACCAAGGGGTTAAGAGATTGGCGCAAAGATTT 715 Query 720 GTGCCAATGGCGTTTGCTTCTGATGGATTAATGGAAGGTTTTTACGATCCGGATGCGTAT 779 ||||||||||| |||||| |||||||||| || ||||| ||||| ||||| ||| ||| Sbjct 716 GTGCCAATGGCTTTTGCTCCTGATGGATTGATTGAAGGGTTTTATGATCCTGATATGTAC 775 Query 780 AATCCCGAAGAAGGG-AAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAGACA 838 ||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||| | Sbjct 776 AATCCTGAAG-AGGGAAAGTTCCTAATGGGTTTACAGTTTCATCCAGAGAGAATGAGG-A 833 Query 839 ACA-TGATCTTGATGAGTTTGATTATCC-TGGTTGTCCTGCTGCTTATCAGGAGTTTGCA 896 | | || | ||||| ||||||| ||| ||||||||||| |||||||||||| |||||| Sbjct 834 AGAATGGTAGCGATGAATTTGATT-TCCCTGGTTGTCCTGTTGCTTATCAGGAATTTGCA 892 Query 897 AAGGCGGTGATTGCGTATCAGAAGAAGCTGAATAGCT-CATTGTCGGTTCCAAAGACATT 955 || || |||||||| | ||| |||||| ||||||| | | ||||| ||||| |||| ||| Sbjct 893 AAAGCAGTGATTGCATGTCAAAAGAAGGTGAATAGTTTC-TTGTCTGTTCCTAAGAAATT 951 Query 956 G-AAGCTTGATAGTGAAATGGAGAATAAAAGAAAGATACTTGTTAGGAGTTTCTCACTTG 1014 | || || || ||||||||||| ||||||||||||||||| ||||| ||||| |||| Sbjct 952 GGAA-CTCAATCCAGAAATGGAGAACAAAAGAAAGATACTTGTCAGGAGCTTCTCGCTTG 1010 Query 1015 CTAAGTATATGTACGTTAGAGGTTC-TCC-TGGGAAGAACTCA-TCAAAAGAATCAGAAC 1071 | | || ||||||| ||| | | | | | | |||||| || || | ||||||||||| Sbjct 1011 CGAGGTCTATGTACACCAGATCT-CATTCGTTG-AAGAAC-CAATCCACAGAATCAGAAC 1067 Query 1072 TCGAAGTTGGAGCCGAGTTTCTTGAGTCCAACACGGCGCTGAGCGCGGAGCAAGAGATGA 1131 | ||||||||||| |||||||||||||| || || || || || | | |||||||||| Sbjct 1068 TTGAAGTTGGAGCTGAGTTTCTTGAGTCAAATACCGCTCTAAGTGTACAACAAGAGATGA 1127 Query 1132 GGCTGAAGGAGATGGGAGCGACGGTGAGAAACGGAGGATCATATATGAAAAAG-TTGAAA 1190 || | || |||||||||||||| |||| || || ||||||| || | ||||| || | Sbjct 1128 GGTTAAAAGAGATGGGAGCGACTATGAGGAATGGTGGATCATTTACGGAAAAGCTT-AG- 1185 Query 1191 G-TAGACGAGGATAAGCAGAGGATGGCGAGGAACATGATGAACAAGATGAACATAGAGCA 1249 | | || || | |||||||||| ||| | |||||| ||||| || |||||||| |||| Sbjct 1186 GCTTGATGAAAAGAAGCAGAGGAAGGCTATGAACATAATGAAGAACATGAACATTGAGCG 1245 Query 1250 ACTCTCAGAGCTTATGGCATTT-TATCATTTGATGGGTAATATCTGTGGAGAAGTTTTGG 1308 |||||| ||||| ||||| ||| || || |||||||| || |||| | | || || |||| Sbjct 1246 ACTCTCTGAGCTCATGGC-TTTCTACCACTTGATGGGGAAGATCTCTAGTGAGGTGTTGG 1304 Query 1309 AGAGAAAGCTTCA 1321 ||||||||||||| Sbjct 1305 AGAGAAAGCTTCA 1317 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68925348285 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5