BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494174
Length=1329
Score E
Sequences producing significant alignments: (Bits) Value
AT5G38040.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1799 0.0
AT5G38010.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1083 0.0
AT3G46660.1 | Symbols: UGT76E12 | UDP-glucosyl transferase 76E1... 691 0.0
AT3G46658.1 | Symbols: | other RNA | chr3:17188870-17191167 FO... 464 9e-130
> AT5G38040.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr5:15185077-15186508 FORWARD LENGTH=1350
Length=1350
Score = 1799 bits (974), Expect = 0.0
Identities = 1230/1351 (91%), Gaps = 27/1351 (2%)
Strand=Plus/Plus
Query 1 ATGGAAAAGAAGCT-TGCGAGGAGAAGAAG-GCTAGTGTTGGTTCCAGCTCCAGCTCAAG 58
||||| ||||||| | ||||||||||||| | ||||||||||||||| |||||||||||
Sbjct 1 ATGGAGGAGAAGCTCT-CGAGGAGAAGAAGAG-TAGTGTTGGTTCCAGTTCCAGCTCAAG 58
Query 59 GACATATAAATCCAATGATGCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCTATTA 118
||||||||| ||||||||| ||||| |||||| | ||| ||| ||| || ||||||||||
Sbjct 59 GACATATAACTCCAATGATACAACTTGCAAAAGCACTTCACTCAAAAGGCTTCTCTATTA 118
Query 119 CAGTTGCTCAAACCAAGTTCAACTACTTAAACCCTTCAAGTGATTTGTCTGATTTTCAGT 178
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 119 CAGTTGTTCAAACCAAGTTCAACTACTTAAACCCTTCAAATGATTTGTCTGATTTTCAGT 178
Query 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTTGGACCAGGACGGT 238
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 179 TTGTAACCATCCCAGAGAACTTACCAGTGTCTGATCTTAAGAATCTAGGACCAGGACGGT 238
Query 239 TTTTGATTAAGCTAGCTAAAGAGTGTTATGTTAGCTTTAAAGAGTTGTTAGGTCAGTTAT 298
|| |||||||||||||||| |||||||||||||||||||| || |||||||||||||| |
Sbjct 239 TTCTGATTAAGCTAGCTAATGAGTGTTATGTTAGCTTTAAGGATTTGTTAGGTCAGTTGT 298
Query 299 TGGTTAAT------GAAGAGATCGCTTGTGTTATCTACGATGAGTTCATGTACTTTGTTG 352
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 299 TGGTTAATGAAGAAGAAGAGATCGCTTGTGTTATCTACGACGAGTTCATGTACTTTGTTG 358
Query 353 AAGCAGCAGTTGAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACAG 412
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 359 AAGTAGCAGTTAAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACGG 418
Query 413 CTTTTGTTTGTCGCTTTGTTATGTGCAAACTCTATGCAAAAGATGGTTTGGCTCAACTT- 471
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 419 CTTTTGTTTGTCGCTTTGTTATGTGTGAACTCTATGCTAAAGATGGTTTGGCTCAACTTA 478
Query 472 -A-AA------GA---AG-A--GGAGTTAGTACCGGAGTTATATCCTATACGGTACAAAG 517
| || || || | |||||||||||||||||| |||||||||||||||||||
Sbjct 479 AAGAAGGCGGTGAGCGAGAAGTGGAGTTAGTACCGGAGTTGTATCCTATACGGTACAAAG 538
Query 518 ATCTACCAAGTTCAGTATTTGCTTCTGTCGAATGTTCGGTGGAGTTGTTTAAGAATACAT 577
|| |||||||||| |||||||| ||||| |||| ||| ||||||||||||||||||||||
Sbjct 539 ATTTACCAAGTTCGGTATTTGCATCTGTAGAATCTTCAGTGGAGTTGTTTAAGAATACAT 598
Query 578 GTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTTCGGTGTCTAGAGATCTCAT 637
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 599 GTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTGAGGTGTCTAGAGATGTCAT 658
Query 638 CTTTGGATTGGCTTCAACAAGAACTAGATATTCCGGTGTATCCTATAGGCCCTCTTCACA 697
||||||| ||||||||||||||||| || || ||||||||| |||||||||| ||||| |
Sbjct 659 CTTTGGAGTGGCTTCAACAAGAACTTGAAATCCCGGTGTATTCTATAGGCCCGCTTCATA 718
Query 698 TGGCGGTTTCTGCTCCGCGTACGAGTCTTTTAGAAGAGAATGAGAGCTGCATAGAATGGC 757
||| ||| || ||||| | ||||||||||||||||||||| |||||||| |||||||||
Sbjct 719 TGGTGGTGTCAGCTCCTCCTACGAGTCTTTTAGAAGAGAACGAGAGCTGTATAGAATGGT 778
Query 758 TGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGCTTTACTATGATGG 817
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 779 TGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGTTTTACTTTGATGG 838
Query 818 AAACTAAAGAAGTGTTGGAGATGGCTTCGGGGTTGGATAGTAGTAACCAACACTTCTTGT 877
||||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct 839 AAACTAAAGAAATGTTGGAGATGGCTTATGGGTTTGTTAGTAGTAACCAACACTTCTTGT 898
Query 878 GGGTGATTCGACCAGGATCCGT-TAGTGGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAG 936
||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 899 GGGTGATTCGACCGGGATCTATAT-GTGGTTCTGAAATCTCTGAGGAAGAGTTGTTGAAG 957
Query 937 AAGATGGTAACTACAGATCGAGGTTACATAGTGAAATGGGCGCCGCAGAAGCAAGTGCTT 996
|||||||||| ||| |||||||||||||| ||||||||||||||||| || |||||||||
Sbjct 958 AAGATGGTAATTACGGATCGAGGTTACATTGTGAAATGGGCGCCGCAAAAACAAGTGCTT 1017
Query 997 GCACATTCCGCGGTTAGAGCGTTTTGGAGTCATTGCGGATGGAATTCGACTCTAGAAAGC 1056
|||||||| |||||| ||||||| ||||||||||| |||||||| |||||| |||||||
Sbjct 1018 GCACATTCTGCGGTTGGAGCGTTCTGGAGTCATTGTGGATGGAACTCGACTTTAGAAAGT 1077
Query 1057 CTCGGTGAAGGAGTTCCAATGATATGTAGACCTTTTACAACTGATCAAAAGGGGAATGCA 1116
|| ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||
Sbjct 1078 CTTGGTGAAGGAGTTCCATTGATATGTAGGCCTTTTACTACTGATCAAAAGGGGAATGCA 1137
Query 1117 AGGTACTTGGAATGTGTATGGAAAGTAGGGATTCAAGTAGAGGGTGAGCTAGAGAGAGGC 1176
||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1138 AGGTACTTGGAGTGTGTGTGGAAAGTAGGAATTCAAGTGGAGGGTGAGCTAGAGAGAGGC 1197
Query 1177 GCGGTCGAAAAAGCTGTGAAGAGGTTAATGGTCGATGAAGAAGGAGAAGAGATGAAGAGA 1236
|| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1198 GCAATCGAGAGAGCTGTGAAGAGGTTAATGGTGGATGAAGAAGGAGAAGAGATGAAGAGA 1257
Query 1237 AGAGCTCTAAATTTGAAAGAGAAACTCAAAGACTCTGTTTTAGCTCAAGGCTCTTCATAT 1296
|||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||| ||
Sbjct 1258 AGAGCTCTAAGTTTAAAAGAGAAACTCAAAGCCTCTGTTTTAGCTCAAGGTTCTTCACAT 1317
Query 1297 AACTCACTTGATGACTTCATCAAGACTCTGT 1327
|| ||||| ||||||||||||||||||||||
Sbjct 1318 AAATCACTAGATGACTTCATCAAGACTCTGT 1348
> AT5G38010.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr5:15158275-15160212 FORWARD LENGTH=1523
Length=1523
Score = 1083 bits (586), Expect = 0.0
Identities = 1113/1359 (82%), Gaps = 69/1359 (5%)
Strand=Plus/Plus
Query 18 GAGGAGAAGAAGGCTAGTGTTGGTTCCAGCTCCAGCTCAAGGACATATAAATCCAATGAT 77
|||||| |||||| | |||||| |||| |||||||| |||||||| ||| ||| |||||
Sbjct 85 GAGGAGGAGAAGGATCGTGTTGATTCCCGCTCCAGCACAAGGACACATATCTCCGATGAT 144
Query 78 GCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCTATTACAGTTGCTCAAACCAAGTT 137
|||||| |||| | ||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct 145 GCAACTTGCAAGAGCCCTTCACTTAAAGGGCTTCTCCATTACAGTTGCTCAAACCAAGTT 204
Query 138 CAACTACTTAAACCCTTCAAGTGA-TTTGTCTGATTTTCAGTTTGTAACCATCCCAGAGA 196
||| ||||| || ||||||| || || | |||||||||||||| | |||||||||||||
Sbjct 205 CAATTACTTGAAGCCTTCAAAAGACTTAG-CTGATTTTCAGTTTATCACCATCCCAGAGA 263
Query 197 ACTTACCAGTGTCTGATCTTAAGAATCTTGGACCAGGACGGTTT-TTGATTAAGCT-AGC 254
|||||||| || |||||||||||||| ||||||| ||||| || |||| || |
Sbjct 264 GCTTACCAGCCTCGGATCTTAAGAATCTAGGACCAGTTTGGTTTCTT-CTTAAACTCA-A 321
Query 255 TAAAGAGTGTTATG-TTAGCTTTAAAGAGTTG-TTAGGTCAGTTATTG--G--------- 301
|||||||||| | | ||||||| || ||| || |||||||| || ||| |
Sbjct 322 TAAAGAGTGTGA-GTTTAGCTTCAAGGAG-TGTTTAGGTCAATTGTTGCTGCAAAAACAA 379
Query 302 --T-TA----ATGAAGAGATCGCTTGTGTTATCTACGATGAGTTCATGTACTTTGTTGAA 354
| || | ||||||||||||||||| |||||||| |||||||||||||||| ||||
Sbjct 380 CTTATACCGGAAGAAGAGATCGCTTGTGTCATCTACGACGAGTTCATGTACTTTGCTGAA 439
Query 355 GCAGCAGTTGAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTA-CTACAAGTGCAACAGC 413
|| |||| |||||||||| |||| || |||||||| |||| | | || ||| || ||
Sbjct 440 GCTGCAGCCAAAGAGTTTAACCTTCCCAAAGTTATTTTCAGTACCGA-AAATGCGACGGC 498
Query 414 TTTTGTTTGTCGCTTTGTTATGTGCAAACTCTATGCAAAAGATGGTTTGGCTCAACTT-- 471
||||| |||||||| || |||||||||||||||||||||||||||||||||| |||
Sbjct 499 TTTTGCTTGTCGCTCTGCCATGTGCAAACTCTATGCAAAAGATGGTTTGGCTCCCCTTAA 558
Query 472 ---A--A--------AGAAGAGGAGTTAGTACCGGAGTT--ATATCCTATACGGTACAAA 516
| | |||||||||| |||| || |||| || ||| || | ||||||
Sbjct 559 AGAAGGATGTGGGCGAGAAGAGGAGCTAGTGCCAAAGTTGCATCCCCT-TA-GATACAAA 616
Query 517 GATCTACCAAGTTCAGTATTTGCTTCTGTCGAATG-TTCGGTGG-AGTTGTTTAAGAA-T 573
|| ||||||| ||||| |||||| | || ||| | || |||| || ||||||| || |
Sbjct 617 GACCTACCAACTTCAGCATTTGCACCAGTAGAA-GCCTCAGTGGAAG-TGTTTAA-AAGT 673
Query 574 ACATGTTATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTTCGGTGTCTAGAGATC 633
||||| ||||||||||||||||| || |||||||||||||||| |||||||||||||
Sbjct 674 TCATGTGATAAAGGGACAGCTTCCGCTATGATAATCAACACAGTGAGGTGTCTAGAGATA 733
Query 634 TCATCTTTGGATTGGCTTCAACAAGAAC-TAGATATTCCGGTGTATCCTATAGGCCCTCT 692
||||| ||||| |||||||||||||||| || | |||||| | |||||||||||||||||
Sbjct 734 TCATCCTTGGAGTGGCTTCAACAAGAACTTA-AGATTCCGATATATCCTATAGGCCCTCT 792
Query 693 TCACATGGCGGT-TTCTGCTCCGCGTACGAGTCTTTTAGAAGAGAATGAGAGCTGCATAG 751
|||||||| | ||| ||||| | ||||||||| |||| ||||||||||| ||||| |
Sbjct 793 TCACATGG-TTTCTTCAGCTCCTCCTACGAGTCTACTAGACGAGAATGAGAGTTGCATTG 851
Query 752 AATGGCTGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAGCTTTACTA 811
| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 852 ATTGGCTGAACAAACAAAAGCCGAGCTCGGTGATTTACATAAGTTTGGGAAGCTTTACTT 911
Query 812 TGATGGAAACTAAAGAAGTGTTGGAGATGGCTTCGGGGTTGGATAGTAGTAACCAACACT 871
|| |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||
Sbjct 912 TGTTGGAAACTAAAGAAGTGTTGGAAATGGCTTCGGGCTTGGTTAGTAGTAACCAACACT 971
Query 872 TCTTGTGGGTGATTCGACCAGGATCCGTTAGT-GGTTCTGAAATCTCTGAGGAAGAGTTG 930
||||||||||||||||||| || ||| | | | ||||||||| | || | || || ||
Sbjct 972 TCTTGTGGGTGATTCGACCCGGGTCCAT-ACTTGGTTCTGAATTGACTAATGAGGAATTA 1030
Query 931 TTGAAGAA-GATGGTAACTACAG-ATCGAGGTTACATAGTGAAATGGGCGCCGCAGAAGC 988
|||| | | ||||| || ||| | ||||||| ||||| ||||||||||| || || ||||
Sbjct 1031 TTGA-GTATGATGGAAA-TACCGGATCGAGGCTACATTGTGAAATGGGCTCCACAAAAGC 1088
Query 989 AAGTGCTTGCACATTCCGCGGTTAGAGCGTTTTGGAGTCATTGCGGATGGAATTCGACTC 1048
|||||||||||||||| |||||| |||| |||||||||||||| |||||||| |||||||
Sbjct 1089 AAGTGCTTGCACATTCTGCGGTTGGAGCATTTTGGAGTCATTGTGGATGGAACTCGACTC 1148
Query 1049 TAGAAAGCCTCGGTGAAGGAGTTCCAATGATATGTAGACCTTTTACAACTGATCAAAAGG 1108
|||| ||| | |||||||||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct 1149 TAGAGAGCATGGGTGAAGGAGTTCCGATGATTTGTAGGCCTTTTACTACTGATCAAAAGG 1208
Query 1109 GGAATGCAAGGTACT-TGGAATGTGTATGGAAAGTAGGGATTCAAGTAGAGGGTGAGCTA 1167
||||| |||| | |||| ||||| |||| ||| ||| ||||||| |||||||| |||
Sbjct 1209 TAAATGCGCGGTA-TGTGGAGTGTGTCTGGAGAGTTGGGGTTCAAGTGGAGGGTGAACTA 1267
Query 1168 GAGAGAGGCGCGGTCGAAAAAGCTGTGAAGAGGTTAATGGTCGATGAAGAAGGAGAAGAG 1227
||||||| | ||||| | |||||||||||||||| |||| ||||||||||||||||||
Sbjct 1268 AAGAGAGGAGTAGTCGAGAGAGCTGTGAAGAGGTTACTGGTGGATGAAGAAGGAGAAGAG 1327
Query 1228 ATGAAGA-GAAGAGCTCTAAATTTGAAAGAGAAACTCAAAGACTCTGTTTTAGCTCAAGG 1286
|||||| || ||||||| | |||||||||||||||||||| |||||| || | |||
Sbjct 1328 ATGAAGTTGA-GAGCTCTCAGTTTGAAAGAGAAACTCAAAGTTTCTGTTCTACCGGGAGG 1386
Query 1287 CTCTTCATATAACTCACTTGATGACTTCATCAAGACTCT 1325
|||||| | | ||||| |||||||| |||||||||||
Sbjct 1387 TTCTTCACACAGTTCACTAGATGACTTAATCAAGACTCT 1425
> AT3G46660.1 | Symbols: UGT76E12 | UDP-glucosyl transferase 76E12
| chr3:17189264-17191167 REVERSE LENGTH=1824
Length=1824
Score = 691 bits (374), Expect = 0.0
Identities = 1049/1359 (77%), Gaps = 110/1359 (8%)
Strand=Plus/Plus
Query 10 AAGCTTGCGAGGAGAAGAAGGCTAGTGTTGGTTCCAGCTCCAGCTCAAGGACATATAAAT 69
|||| ||| |||||||| | |||||||||||||| |||||| |||||||||||| |
Sbjct 330 AAGCCTGCAAGGAGAAG--CG-TAGTGTTGGTTCCATTTCCAGCACAAGGACATATATCT 386
Query 70 CCAATGATGCAACTCGCAAAAACCCTTTACTTAAAGGGTTTCTCTATTACAGTTGCTCAA 129
|||||||||||||| || ||||||||| |||||||||||||||| || ||||||| |||
Sbjct 387 CCAATGATGCAACTTGCCAAAACCCTTCACTTAAAGGGTTTCTCGATCACAGTTGTTCAG 446
Query 130 ACCAAGTTCAACTACTTAAACCCTTCAAG-TGA-TT-TGTC-TGATTTTCAGTTTGTAAC 185
|| |||||||| ||||| | |||||| || ||| || || |||||||||||| || ||
Sbjct 447 ACTAAGTTCAATTACTTTAGCCCTTC-AGATGACTTCACTCATGATTTTCAGTTCGTCAC 505
Query 186 CATCCCAGAGAA-CTTACCAGTGTCTGATCTT-AAGAATCTTGGACCAGGACGGTTTTTG 243
||| ||||| || |||||||| ||||||| || |||||||| |||||| || |||| ||
Sbjct 506 CATTCCAGA-AAGCTTACCAGAGTCTGAT-TTCAAGAATCTCGGACCAATACAGTTTCTG 563
Query 244 ATTAAGCT-AGCTAAAGAGTGTTATGTTAGCTTTAAAGAGTTG-TTAGGTCAGTT-AT-- 298
||||||| | | ||||||||| | || ||||| || || || || |||||||| |
Sbjct 564 TTTAAGCTCAAC-AAAGAGTGTAAGGTGAGCTTCAAGGA-CTGTTTGGGTCAGTTGGTGC 621
Query 299 TG-GTTAATG-AA-GAGATCGCTTGTGTTATCTACGATGAGTTCATGTACTTTGTTGAAG 355
|| || | || |||||| | ||||| ||||||||||||||||||||||||| |||||
Sbjct 622 TGCAACAAAGTAATGAGATCTCATGTGTCATCTACGATGAGTTCATGTACTTTGCTGAAG 681
Query 356 CAGCAGTTGAAGAGTTTAAGCTTCGTAATGTTATTTTAAGTACTACAAGTGCAACAGCTT 415
| |||| |||||| |||||||| || | ||||| || || |||||||| || ||||
Sbjct 682 CTGCAGCCAAAGAGTGTAAGCTTCCAAACATCATTTTCAGCACAACAAGTGCCACGGCTT 741
Query 416 TTGTTTGTCGCTTTGTTATGTG-CAAACTCTATGC-AA-AA-G---ATGGT---TTG--- 462
| | ||| |||| || ||| || |||||| ||||| || || | | | | |||
Sbjct 742 TCGCTTGCCGCTCTG-TATTTGACAAACTATATGCAAACAATGTCCAAGCTCCCTTGAAA 800
Query 463 G---CTCAACTTA-AAGAAGAGGAGTTAGTACCGGAGTTATAT-CCTAT-ACGGTACAAA 516
| || || | || |||| ||| |||| |||||||| ||| ||| | | | || |||
Sbjct 801 GAAACT-AAAGGACAACAAGAAGAGCTAGTTCCGGAGTTTTATCCCT-TGA-GATATAAA 857
Query 517 GATC-TACCAAG-TTCA-GTATTTGCTTC-TGTCGA-ATG-TTCGGTGGAGTTGTTTAAG 570
|| | | || || |||| | ||||| || | | || | | | ||||| ||| || |
Sbjct 858 GA-CTTTCC-AGTTTCACG-GTTTGCATCAT-TAGAGA-GCAT-AATGGAGGTGTATAGG 911
Query 571 AATACATGTT-ATAAAGGGACAGCTTCCTCTGTGATAATCAACACAGTTCG-G-TGTCTA 627
|||||| ||| | ||| ||||||||||||| |||||||||||||| | || | ||||||
Sbjct 912 AATACA-GTTGACAAACGGACAGCTTCCTCGGTGATAATCAACAC--TGCGAGCTGTCTA 968
Query 628 GAGATCTCATCTTTGGATTGGCTTCAACAA-GA-A-CTAGATATTCCGGTGTATCCTATA 684
|||| ||||||| || || || |||||| | | ||| | ||||| ||||||||||||
Sbjct 969 GAGAGCTCATCTCTGTCTTTTCTGCAACAACAACAGCTACAAATTCCAGTGTATCCTATA 1028
Query 685 GGCCCTCTTCACATGGCGGTTTCTGCTCCGCGTACGAGTCT-TTTAGAAGAGAATGAGAG 743
|||||||||||||||| || || ||| | | ||| ||||| || |||||||| ||||
Sbjct 1029 GGCCCTCTTCACATGGTGGCCTCAGCT-C-C-TACAAGTCTGCTT-GAAGAGAACAAGAG 1084
Query 744 CTGCATAGAATGGCTGAACAAACAAAAGCCGAGCTCGGTGATATACATAAGCTTGGGAAG 803
|||||| |||||| |||||||||||||| | ||||||||||||||||||| |||||||
Sbjct 1085 CTGCATCGAATGGTTGAACAAACAAAAGGTAAACTCGGTGATATACATAAGCATGGGAAG 1144
Query 804 CTTTA-CTATGATGGAAACTAAA-GA-AGTGTTGGA-GATGGCTTCGGGGTTGGATAG-T 858
| | | || | ||||||| | || || | | |||| | | || || || |||| | | |
Sbjct 1145 CAT-AGCTTTAATGGAAA-TCAACGAGA-TAATGGAAG-TCGCGTCAGGATTGGCT-GCT 1199
Query 859 AGTAACCAACACTTCTTGTGGGTGATTCGACCAGGATCCGTTAG-TGGTTC----TG-A- 911
|| |||||||||||||| |||||||| |||||||| || | | |||||| || |
Sbjct 1200 AGCAACCAACACTTCTTATGGGTGATCCGACCAGGGTCAAT-ACCTGGTTCCGAGTGGAT 1258
Query 912 A-A-TCTC-TGAG-GAAGAGTTGTTGAAGAAGATGGTAACTACAGATCGAGGTTACATAG 967
| | || | || |||||||| | | | | |||||| | || ||||||||||| |
Sbjct 1259 AGAGTC-CATGCCTGAAGAGTT-TAGTA-A-GATGGTTT-TG--GACCGAGGTTACATTG 1311
Query 968 TGAAATGGGCGCCGCAGAAGCAAGTGCTTGCACATTCC-GCGGTTAG-AGCGTTTTGGAG 1025
|||||||||| || |||||| |||| ||| | ||| || || || || || |||||||||
Sbjct 1312 TGAAATGGGCTCCACAGAAGGAAGTACTTTCTCAT-CCTGCAGT-AGGAGGGTTTTGGAG 1369
Query 1026 TCATTGCGGATGGAATTCGACTCTAGAAAGCCTCGGTGAAGGAGTTCCAATGATATGTAG 1085
||||| |||||||| ||||| ||||||||| |||| |||||||||||||||| || ||
Sbjct 1370 CCATTGTGGATGGAACTCGACACTAGAAAGCATCGGCCAAGGAGTTCCAATGATCTGCAG 1429
Query 1086 ACC-TTTTACAACTGATCAAAAGGGGAATGCAAGGTACTTGGAATGTGTATGGAAAGTAG 1144
|| |||| | ||||||||||| ||| || || |||||||| |||||||||||| | |
Sbjct 1430 GCCATTTT-CGGGTGATCAAAAGGTGAACGCTAGATACTTGGAGTGTGTATGGAAAATTG 1488
Query 1145 GGATTCAAGTAGAGGGTGAGCTAGAGAGAGGCGCGGTCGAAAAAGCTGTGAAGAGGTTAA 1204
|||||||||| |||||||||||||| ||||| | |||||| | |||||||||||||||||
Sbjct 1489 GGATTCAAGTGGAGGGTGAGCTAGACAGAGGAGTGGTCGAGAGAGCTGTGAAGAGGTTAA 1548
Query 1205 TGGTCGATGAAGAAGGAGAAGAGATGAAGA-GAAGAGCTCTAAATTTGAAAGAGAAACTC 1263
|||| || ||||||||||| ||||||| || || ||||| | | ||| |||||| ||||
Sbjct 1549 TGGTTGACGAAGAAGGAGAGGAGATGAGGAAGA-GAGCTTTCAGTTTAAAAGAGCAACTT 1607
Query 1264 AAAGACTCTGTTTTA-GCTCAAGGCTCTTCATATAACTC 1301
| || ||||||| | | | |||||||||| | |||||
Sbjct 1608 AGAGCCTCTGTTAAAAG-TGGAGGCTCTTCACACAACTC 1645
> AT3G46658.1 | Symbols: | other RNA | chr3:17188870-17191167
FORWARD LENGTH=2026
Length=2026
Score = 464 bits (251), Expect = 9e-130
Identities = 608/773 (79%), Gaps = 53/773 (7%)
Strand=Plus/Minus
Query 557 TGGAGTTGTTTAAGAATACATGTT-ATAAAGGGACAGCTTCCTCTGTGATAATCAACACA 615
||||| ||| || ||||||| ||| | ||| ||||||||||||| ||||||||||||||
Sbjct 1049 TGGAGGTGTATAGGAATACA-GTTGACAAACGGACAGCTTCCTCGGTGATAATCAACAC- 992
Query 616 GTTCG-G-TGTCTAGAGATCTCATCTTTGGATTGGCTTCAACAA-GA-A-CTAGATATTC 670
| || | |||||||||| ||||||| || || || |||||| | | ||| | ||||
Sbjct 991 -TGCGAGCTGTCTAGAGAGCTCATCTCTGTCTTTTCTGCAACAACAACAGCTACAAATTC 933
Query 671 CGGTGTATCCTATAGGCCCTCTTCACATGGCGGTTTCTGCTCCGCGTACGAGTCT-TTTA 729
| |||||||||||||||||||||||||||| || || ||| | | ||| ||||| ||
Sbjct 932 CAGTGTATCCTATAGGCCCTCTTCACATGGTGGCCTCAGCT-C-C-TACAAGTCTGCTT- 877
Query 730 GAAGAGAATGAGAGCTGCATAGAATGGCTGAACAAACAAAAGCCGAGCTCGGTGATATAC 789
|||||||| |||||||||| |||||| |||||||||||||| | |||||||||||||
Sbjct 876 GAAGAGAACAAGAGCTGCATCGAATGGTTGAACAAACAAAAGGTAAACTCGGTGATATAC 817
Query 790 ATAAGCTTGGGAAGCTTTA-CTATGATGGAAACTAAA-GA-AGTGTTGGA-GATGGCTTC 845
|||||| |||||||| | | || | ||||||| | || || | | |||| | | || ||
Sbjct 816 ATAAGCATGGGAAGCAT-AGCTTTAATGGAAA-TCAACGAGA-TAATGGAAG-TCGCGTC 761
Query 846 GGGGTTGGATAG-TAGTAACCAACACTTCTTGTGGGTGATTCGACCAGGATCCGTTAG-T 903
|| |||| | | ||| |||||||||||||| |||||||| |||||||| || | | |
Sbjct 760 AGGATTGGCT-GCTAGCAACCAACACTTCTTATGGGTGATCCGACCAGGGTCAAT-ACCT 703
Query 904 GGTTC----TG-A-A-A-TCTC-TGAG-GAAGAGTTGTTGAAGAAGATGGTAACTACAGA 953
||||| || | | | || | || |||||||| | | | | |||||| | ||
Sbjct 702 GGTTCCGAGTGGATAGAGTC-CATGCCTGAAGAGTT-TAGTA-A-GATGGTTT-TG--GA 650
Query 954 TCGAGGTTACATAGTGAAATGGGCGCCGCAGAAGCAAGTGCTTGCACATTCC-GCGGTTA 1012
||||||||||| ||||||||||| || |||||| |||| ||| | ||| || || || |
Sbjct 649 CCGAGGTTACATTGTGAAATGGGCTCCACAGAAGGAAGTACTTTCTCAT-CCTGCAGT-A 592
Query 1013 G-AGCGTTTTGGAGTCATTGCGGATGGAATTCGACTCTAGAAAGCCTCGGTGAAGGAGTT 1071
| || ||||||||| ||||| |||||||| ||||| ||||||||| |||| ||||||||
Sbjct 591 GGAGGGTTTTGGAGCCATTGTGGATGGAACTCGACACTAGAAAGCATCGGCCAAGGAGTT 532
Query 1072 CCAATGATATGTAGACC-TTTTACAACTGATCAAAAGGGGAATGCAAGGTACTTGGAATG 1130
|||||||| || || || |||| | ||||||||||| ||| || || |||||||| ||
Sbjct 531 CCAATGATCTGCAGGCCATTTT-CGGGTGATCAAAAGGTGAACGCTAGATACTTGGAGTG 473
Query 1131 TGTATGGAAAGTAGGGATTCAAGTAGAGGGTGAGCTAGAGAGAGGCGCGGTCGAAAAAGC 1190
|||||||||| | ||||||||||| |||||||||||||| ||||| | |||||| | |||
Sbjct 472 TGTATGGAAAATTGGGATTCAAGTGGAGGGTGAGCTAGACAGAGGAGTGGTCGAGAGAGC 413
Query 1191 TGTGAAGAGGTTAATGGTCGATGAAGAAGGAGAAGAGATGAAGA-GAAGAGCTCTAAATT 1249
|||||||||||||||||| || ||||||||||| ||||||| || || ||||| | | ||
Sbjct 412 TGTGAAGAGGTTAATGGTTGACGAAGAAGGAGAGGAGATGAGGAAGA-GAGCTTTCAGTT 354
Query 1250 TGAAAGAGAAACTCAAAGACTCTGTTTTA-GCTCAAGGCTCTTCATATAACTC 1301
| |||||| |||| | || ||||||| | | | |||||||||| | |||||
Sbjct 353 TAAAAGAGCAACTTAGAGCCTCTGTTAAAAG-TGGAGGCTCTTCACACAACTC 302
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65411310135
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5