BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494175 Length=1730 Score E Sequences producing significant alignments: (Bits) Value AT5G38030.1 | Symbols: | MATE efflux family protein | chr5:151... 2521 0.0 AT3G26590.1 | Symbols: | MATE efflux family protein | chr3:976... 1831 0.0 AT1G12950.1 | Symbols: RSH2 | root hair specific 2 | chr1:44197... 872 0.0 > AT5G38030.1 | Symbols: | MATE efflux family protein | chr5:15171246-15175457 REVERSE LENGTH=1892 Length=1892 Score = 2521 bits (1365), Expect = 0.0 Identities = 1612/1732 (93%), Gaps = 14/1732 (1%) Strand=Plus/Plus Query 2 TTTTCTATATAATTCATGTGTGACTAATCCCAAGATCCTCACTCTTTGGTCTTTAGTCTT 61 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 53 TTTTCTATATAATTCATGTATGACTAATCCCAAGATGCTCACTCTTTGGTCTTTAGTCTT 112 Query 62 TTGACATTCTTTAATCTTTCCATCTCTGTCTCTGTCTCGTCGACATGGAAAAAGACAAAA 121 || |||| ||||||||||||||||| ||||||| |||||| || |||||| ||||||||| Sbjct 113 TT-ACATGCTTTAATCTTTCCATCTTTGTCTCTATCTCGTGGATATGGAAGAAGACAAAA 171 Query 122 ATCTAACGGAGACCCTTCTATCTGCGGCGGAAGAACGACCT-CATCTTCCTTTCTCATCC 180 ||| ||||||||||||||||||||||||||||||| |||| | |||||||||||||||| Sbjct 172 TTCTTACGGAGACCCTTCTATCTGCGGCGGAAGAACCACCTGC-TCTTCCTTTCTCATCC 230 Query 181 GTAGATGATATTCCTCCGATCACCACCGTTCGTGGCTTCCTCAGGGAGTTTAACGTGGAG 240 || || |||||||||||||||||||||||| |||||||| ||| |||||| ||||||||| Sbjct 231 GTGGAAGATATTCCTCCGATCACCACCGTTGGTGGCTTCGTCAAGGAGTTCAACGTGGAG 290 Query 241 GTCAAAAAGCTATGGTACTTGGCCGGGCCAGCTATTTTCATGTCGT-TAACTCAGTATTC 299 ||||||||||||||||||||||| |||||||| ||||||||||| | |||| || ||||| Sbjct 291 GTCAAAAAGCTATGGTACTTGGCAGGGCCAGCCATTTTCATGTC-TATAACCCAATATTC 349 Query 300 TCTCGGCGCTGCTACTCAGGTCTTCGCCGGACACATCAGCACTATCGCTCTGGCGGCCGT 359 |||||||||||||||||||||||||||||||||||||||||| |||||||| || || || Sbjct 350 TCTCGGCGCTGCTACTCAGGTCTTCGCCGGACACATCAGCACCATCGCTCTCGCAGCGGT 409 Query 360 CTCCGTCGAAAACTCGGTCATCGCCGGGTTCTCATTTGGCGTCATGCTTGGAATGGGAAG 419 |||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct 410 CTCCGTTGAAAACTCGGTCATCGCTGGATTCTCATTTGGTGTCATGCTTGGAATGGGAAG 469 Query 420 CGCGTTAGAAACGCTATGTGGACAAGCGTTTGGAGCAGGGAAATTGTCAATGCTTGGCGT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 470 CGCGTTAGAAACGCTATGTGGACAAGCGTTTGGAGCAGGGAAATTGTCAATGCTTGGCGT 529 Query 480 TTACTTGCAACGATCATGGGTGATACTTAACGTGACCGCGATT-TTACTCTCTCTCCTAT 538 ||||||||||||||||||||||||||| |||||||||||| || || ||||| || || | Sbjct 530 TTACTTGCAACGATCATGGGTGATACTAAACGTGACCGCGGTTATT-CTCTCGCTTCTTT 588 Query 539 ACATTTTCGCCGCTCCAATCCTGGCGTTCATCGGCCAGACGCCAGCGATCTCTAGCGCCA 598 |||| ||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| Sbjct 589 ACATCTTCGCCGCTCCAATCCTCGCGTTCATCGGTCAAACGCCGGCGATCTCTAGCGCCA 648 Query 599 CAGGAATATTTTCCATCTACATGATCCCACAGATCTTTGCTTACGCCGTTAATTACCCAA 658 | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 649 CGGGAATATTTTCCATCTACATGATCCCTCAGATCTTTGCTTACGCTGTTAATTACCCAA 708 Query 659 CCGCTAAATTCTTGCAATCACAAAGCAAAATCATGGTCATGGCTGCGATATCAGCGGTTG 718 | ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 709 CGGCTAAGTTCTTGCAATCACAAAGCAAAATCATGGTGATGGCTGCGATATCAGCGGTTG 768 Query 719 CACTTGTTCTACACGTGCTCTTCACGTGGTTTGTCATTGAGGGGCTCCAGTGGGGCACGG 778 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 769 CACTTGTTCTACACGTGCTCCTCACGTGGTTTGTCATTGAGGGGCTCCAGTGGGGCACGG 828 Query 779 CGGGTCTAGCCGTCGTGCTTAACGCGTCGTGGTGGTTCATTGTCGTCGCACAGCTCGTGT 838 ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||| Sbjct 829 CGGGTCTAGCCGTCGTGCTCAACGCCTCGTGGTGGTTCATTGTCGTGGCGCAGCTTGTGT 888 Query 839 ACATATTTAGTGGCACATGTGGTGAAGCTTGGTCTGGATTCTCCTGGGAAGCCTTCCATA 898 ||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || |||| Sbjct 889 ACATATTTAGTGGTACATGCGGTGAAGCTTGGTCTGGATTCTCATGGGAAGCTTTTCATA 948 Query 899 ATTTGTGGAGTTTCGTTAGATTATCTTTGGCTTCTGCTGTTATGCTTTGTTTGGAGGTGT 958 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct 949 ATTTGTGGAGTTTCGTCAGATTATCTTTGGCTTCTGCTGTTATGCTCTGTTTGGAGGTAT 1008 Query 959 GGTATCTCATGGCAGTCATACTATTTGCTGGATATTTGAAGAATGCTGAGATCTCCGTAG 1018 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1009 GGTATCTTATGGCAGTCATATTATTTGCTGGATATTTGAAGAATGCTGAGATCTCCGTAG 1068 Query 1019 CCGCTCTCTCCATCTGCATGAACATTTTGGGATGGACTGCAATGATTGCTATTGGGATGA 1078 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1069 CTGCTCTCTCCATCTGCATGAACATTTTGGGATGGACTGCAATGATTGCTATTGGGATGA 1128 Query 1079 ACACAGCCGTAAGTGTGAGAGTGTCTAATGAACTAGGAGCAAAGCATCCAAGAACCGCGA 1138 || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| | Sbjct 1129 ACGCAGCCGTAAGTGTGAGAGTGTCTAATGAATTAGGAGCAAAACATCCAAGAACCGCAA 1188 Query 1139 AATTTTCTCTACTAGTGGCAGTGATAACATCGACACTGCTCGGACTTGCTATATCAATTG 1198 |||| || ||||||||||||||||||||||| ||| || ||||||||||||||||||||| Sbjct 1189 AATTCTCACTACTAGTGGCAGTGATAACATCTACAGTGATCGGACTTGCTATATCAATTG 1248 Query 1199 CTCTACTCATCTTTAGAGATCAATATCCATCGTTTTTTGTGGGAGACGAAGAAGTCATCA 1258 |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| Sbjct 1249 CTCTACTCATCTTTAGAGATAAATATCCATCGTTATTTGTGGGAGACGAAGAAGTTATCA 1308 Query 1259 TTGTTGTTAAAGATCTTACACCAATTCTTACACTCTCCATTGTCATCAACAATGTCCAAC 1318 ||||||||||||||||||||||||| || || |||| |||||||||||||||||||||| Sbjct 1309 TTGTTGTTAAAGATCTTACACCAATACTCGCAGTCTCTATTGTCATCAACAATGTCCAAC 1368 Query 1319 CTGTCTTATCAGGGGTGGCTGTGGGAGCTGGATGGCAAGCAGCCGTGGCGTACGTTAACA 1378 |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 1369 CTGTCTTATCAGGGGTGGCTGTGGGAGCTGGATGGCAAGCAGTTGTGGCATACGTTAACA 1428 Query 1379 TAGTCTGCTATTACTTGTTTGGAATCCCATTTGGTCTATTATTAGGATACAAGCTTAACT 1438 |||| || |||||| |||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct 1429 TAGTATGTTATTACGTGTTTGGAATCCCATTTGGTCTGTTACTAGGCTACAAGCTTAACT 1488 Query 1439 TTGGCGTAATGGGAATTTGGTGCGGAATGTTGACGGGAACCGTGGTACAGACAATAGTCT 1498 |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 1489 TTGGTGTAATGGGAATCTGGTGCGGAATGTTGACAGGAACCGTGGTTCAGACAATAGTCT 1548 Query 1499 TAACATTGATGATCTGCAGAACAAATTGGGACACAGAGGCTGCAATGGCTGAGGGTAGGA 1558 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1549 TAACATGGATGATCTGTAGAACAAATTGGGACACAGAGGCTGCAATGGCTGAGGGTAGGA 1608 Query 1559 TAAGAAAGTGGGGAGGAGAAGGATCAGAGCAACTCTTAAACTAAAAAGACATTTTAAGAA 1618 ||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||||| Sbjct 1609 TAAGAGAGTGGGGAGGAGAAGTATCAGATCAACTCTTAAACTAAAAAGACATTATAAGAA 1668 Query 1619 GTGGTATTTTGTGTTTTTAGTGTTCATTAACCTCGTGATTTGTATTCATGTTGAACCTTT 1678 ||| ||| || || | || || ||||| |||||||||||||||||||| ||| |||| Sbjct 1669 GTGATATA--GT-TTGT--GTTTT-ATTAATCTCGTGATTTGTATTCATGTCGAATCTTT 1722 Query 1679 TGTTGCATCAAAGTTTGTTTTTGTGTCTTTTTGGTTGTATCATGAGTCTTGT 1730 |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1723 -GTTGCATCAAAGTTTGTTTTTGTGTCTTTTTGGTTGTACCATGAGTCTTGT 1773 > AT3G26590.1 | Symbols: | MATE efflux family protein | chr3:9761700-9765315 REVERSE LENGTH=1786 Length=1786 Score = 1831 bits (991), Expect = 0.0 Identities = 1391/1583 (88%), Gaps = 31/1583 (2%) Strand=Plus/Plus Query 42 ACTCTTTGGTCTTTAGTCTTTTGACATTCTTTAATCTTTCCATCTCTGTCTCTGTCTCGT 101 |||| |||||| |||||| || ||| | ||||||||| ||||||||| | || ||| | Sbjct 1 ACTCGTTGGTCCTTAGTC-TTCGACCTCCTTTAATCTCTCCATCTCT-T-TC--TCT--T 53 Query 102 CGACATGGAAAAAGACAAAAATCTAACGGAGACCCTTCT-ATCTGCGGCGGAAGAACGAC 160 | |||| |||||||||| || |||||||||| ||||| | |||||||||||||||| Sbjct 54 -AAGATGGCAAAAGACAAAGATATAACGGAGACGCTTCTCA-CTGCGGCGGAAGAACGTT 111 Query 161 CTCATCTTCCTTTCTCATCCGTAGATGATATTCCTCCGATCACCACCGTTC-GTGGCTTC 219 || |||||||||||| |||||| || |||||||||||||||||||||| || |||||||| Sbjct 112 CTGATCTTCCTTTCTTATCCGTCGACGATATTCCTCCGATCACCACCG-TCGGTGGCTTC 170 Query 220 CTCAGGGAGTTTAACGTGGAGGTCAAAAAGCTATGGTACTTGGCCGGGCCAGCTATTTTC 279 | ||||| || |||||||| |||||||||||||||||||||||| || || |||||| Sbjct 171 GTTAGGGAATTCAACGTGGAAACCAAAAAGCTATGGTACTTGGCCGGTCCCGCCATTTTC 230 Query 280 ATGT-CGTTAACTCAGTATTCTCTCGGCGCTGCTACTCAGGTCTTCGCCGGACACATCAG 338 | | ||| ||| || ||||||||||||||| |||||||||||||||||| |||||||| Sbjct 231 ACATCCGTGAAC-CAATATTCTCTCGGCGCTATTACTCAGGTCTTCGCCGGTCACATCAG 289 Query 339 CACTATCGCTCTGGCGGCCGTCTCCGTCGAAAACTCGGTCATCGCCGGGTTCTCATTTGG 398 ||| |||||||| || || ||||||||||||||||| ||| | ||||| |||||||| || Sbjct 290 CACCATCGCTCTTGCCGCTGTCTCCGTCGAAAACTCCGTCGTTGCCGGCTTCTCATTCGG 349 Query 399 CGTCATGCTTGGAATGGGAAGCGCGTTAGAAACGCTATGTGGACAAGCGTTTGGAGCAGG 458 | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 350 CATCATGCTTGGAATGGGAAGTGCGTTAGAAACGCTATGTGGACAAGCGTTTGGAGCAGG 409 Query 459 GAAATTGTCAATGCTTGGCGTTTACTTGCAACGATCATGGGTGATACTTAACGTGACCGC 518 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 410 AAAATTGTCAATGCTTGGCGTTTACTTGCAACGATCATGGGTGATACTAAACGTGACTGC 469 Query 519 GATTTTACTCTCTCTCCTATACATTTTCGCCGCTCCAATCCTGGCGTTCATCGGCCAGAC 578 || | ||||||||||| |||||||||||||| || ||||| |||| ||| || || || Sbjct 470 TCTTATCCTCTCTCTCCTTTACATTTTCGCCGCCCCTATCCTCGCGTCCATTGGTCAAAC 529 Query 579 GCCAGCGATCTCTAGCGCCACAGGAATATTTTCCATCTACATGATCCCACAGATCTTTGC 638 | | || ||||||||||| | |||||||||||||||||||||||||| || |||||||| Sbjct 530 GGCGGCAATCTCTAGCGCGGCCGGAATATTTTCCATCTACATGATCCCTCAAATCTTTGC 589 Query 639 TTACGCCGTTAATTACCCAACCGCTAAATTCTTGCAATCACAAAGCAAAATCATGGTCAT 698 |||||| | |||| |||||||||||||| |||||||| |||||||| || |||||||| Sbjct 590 CTACGCCATCAATTTTCCAACCGCTAAATTTTTGCAATCGCAAAGCAAGATAATGGTCAT 649 Query 699 GGCTGCGATATCAGCGGTTGCACTTGTTCTACACGTG-CTCTTCACGTGGTTTGTCATTG 757 ||| | |||||| || |||||||||||| |||||||| ||| |||||||||||||||||| Sbjct 650 GGCCGTGATATCGGCTGTTGCACTTGTTATACACGTGCCTC-TCACGTGGTTTGTCATTG 708 Query 758 AGGGGCTCCAGTGGGGCACGGCGGGTCTAGCCGTCGTGCTTAACGCGTCGTGGTGGTTCA 817 | |||||||||||| | | | ||||||||||| |||||||||||||||||||| |||| Sbjct 709 TGAAGCTCCAGTGGGGTATGCCAGGTCTAGCCGTAGTGCTTAACGCGTCGTGGTGCTTCA 768 Query 818 TTGTCGTCGCACAGCTCGTGTACATATTTAGTGGCACATGTGGTGAAGCTTGGTCTGGAT 877 ||| | | || ||||| ||||||||||||||||| || |||||||| ||||||||||| | Sbjct 769 TTGACATGGCTCAGCTTGTGTACATATTTAGTGGTACGTGTGGTGAGGCTTGGTCTGGTT 828 Query 878 TCTCCTGGGAAGCCTTCCATAATTTGTGGAGTTTCGTTAGATTATCTTTGGCTTCTGCTG 937 |||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 829 TCTCGTGGGAGGCTTTTCATAATTTGTGGAGTTTCGTTAGATTATCTTTGGCTTCTGCTG 888 Query 938 TTATGCTTTGTTTGGAGGTGTGGTATCTCATGGCAGTCATACTATTTGCTGGATATTTGA 997 ||||||| ||||||||||| |||||| | |||||| ||||| |||||||||||||||||| Sbjct 889 TTATGCTCTGTTTGGAGGTTTGGTATTTTATGGCAATCATATTATTTGCTGGATATTTGA 948 Query 998 AGAATGCTGAGATCTCCGTAGCCGCTCTCTCCATCTGCATGAACATTTTGGGATGGACTG 1057 |||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||| Sbjct 949 AGAATGCTGAAATCTCTGTAGCTGCCCTCTCCATCTGCATGAATATTTTGGGATGGACTG 1008 Query 1058 CAATGATTGCTATTGGGATGAACACAGCCGTAAGTGTGAGAGTGTCTAATGAACTAGGAG 1117 | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1009 CTATGATTGCTATTGGGATGAACACAGCCGTAAGTGTGAGAGTGTCTAATGAATTAGGAG 1068 Query 1118 CAAAGCATCCAAGAACCGCGAAATTTTCTCTACTAGTGGCAGTGATAACATCGACACTGC 1177 | || |||||||||||||||||||| || ||||| |||||||||||||||||||| || Sbjct 1069 CTAACCATCCAAGAACCGCGAAATTCTCACTACTTGTGGCAGTGATAACATCGACGCTAA 1128 Query 1178 TCGGACTTGC-TA-TATCAATTGCT-CTACTCATCTTTAGAGATCAATATCCATCGTTTT 1234 ||||| || | | ||||||| | | ||||||||||||||||||||||||||||| ||| Sbjct 1129 TCGGA-TT-CATTGTATCAAT-GATTCTACTCATCTTTAGAGATCAATATCCATCACTTT 1185 Query 1235 TTGTGGGAGACGAAGAAGTCATCATTGTTGTTAAAGATCTTACACCAATTCTTACACTCT 1294 ||||| ||||||| ||||||||||| |||||||||| || |||||||| ||| |||| | Sbjct 1186 TTGTGAAAGACGAAAAAGTCATCATTCTTGTTAAAGAACTCACACCAATACTTGCACTTT 1245 Query 1295 CCATTGTCATCAACAATGTCCAACCTGTCTTATCAGGGGTGGCTGTGGGAGCTGGATGGC 1354 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1246 CCATTGTCATCAACAATGTCCAACCTGTCTTATCAGGTGTGGCTGTGGGAGCTGGATGGC 1305 Query 1355 AAGCAGCCGTGGCGTACGTTAACATAGTCTGCTATTACTTGTTTGGAATCCCATTTGGTC 1414 |||||| ||||| ||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct 1306 AAGCAGTGGTGGCCTACGTTAACATCGCCTGCTATTACGTGTTTGGAATCCCATTTGGTC 1365 Query 1415 TATTATTAGGATACAAGCTTAACTTTGGCGTAATGGGAATTTGGTGCGGAATGTTGACGG 1474 ||||||| || ||||||||||||| ||| ||||||||||| ||||| ||||||||||||| Sbjct 1366 TATTATTGGGGTACAAGCTTAACTATGGTGTAATGGGAATCTGGTGTGGAATGTTGACGG 1425 Query 1475 GAACCGTGGTACAGACAATAGTCTTAACATTGATGATCTGCAGAACAAATTGGGACACAG 1534 | |||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct 1426 GGACCGTGGTTCAGACAATAGTTTTAACATGGATGATCTGCAAAACAAATTGGGACACAG 1485 Query 1535 AGGCTGCAATGGCTGAGGGTAGGATAAGA-AAGTGGGGAGGAGAAGGATCAGA------G 1587 ||||| |||||||||||| |||||||||| || ||||||||||||| |||||| | Sbjct 1486 AGGCTTCAATGGCTGAGGATAGGATAAGAGAA-TGGGGAGGAGAAGTATCAGAAATAAAG 1544 Query 1588 CAACTCTTAAACTAAAAAGACAT 1610 |||||| |||||||||| ||||| Sbjct 1545 CAACTCATAAACTAAAA-GACAT 1566 > AT1G12950.1 | Symbols: RSH2 | root hair specific 2 | chr1:4419770-4422638 FORWARD LENGTH=1824 Length=1824 Score = 872 bits (472), Expect = 0.0 Identities = 1043/1312 (79%), Gaps = 66/1312 (5%) Strand=Plus/Plus Query 298 TCTCTCGGCGCTGCT-ACTCAGGTCTTCGCCGGACACATCAGCACTATCGCTCTGGCGGC 356 |||||||| || | | ||||| || ||||||||||| || |||||| | ||||| || || Sbjct 338 TCTCTCGGAGCCG-TCACTCAAGTTTTCGCCGGACATATTAGCACTCTTGCTCTTGCCGC 396 Query 357 CGTCTCCGTCGAAAACTCGGTCATCGCCGGGTTCTCATTTGGCGTCATGCTTGGAATGGG 416 ||||||| | || ||||| ||||||||||| || |||||||| |||||||||||||||| Sbjct 397 CGTCTCCATTGAGAACTCCGTCATCGCCGGCTTTTCATTTGGTATCATGCTTGGAATGGG 456 Query 417 AAGCGCGTTAGAAACGCTATGTGGACAAGCGTTTGGAGCAGGGAAATTGTCAATGCTTGG 476 ||| ||||| ||||||||||| |||||||||||||||||||||||| | ||||||||||| Sbjct 457 AAGTGCGTTGGAAACGCTATGCGGACAAGCGTTTGGAGCAGGGAAAGTATCAATGCTTGG 516 Query 477 CGTTTACTTGCAACGATCATGGGTGATACTTAA-CGTGACCGCGATTTTACTCTCTCTCC 535 ||||||||| ||||| || ||||| || | ||| ||| ||||| | || || ||||| Sbjct 517 CGTTTACTTACAACGCTCGTGGGTTATTC-TAAGCGTAACCGCTCTCTTCCTTTCTCTAA 575 Query 536 TATACATTTTCGCCGCTCCAATCCTGGCGTTCATCGGCCAGA-CGCCAGCGATCTCTAGC 594 | || || ||||| |||||||||||| | || || ||||| | || | || ||||| | Sbjct 576 TCTATATCTTCGCGGCTCCAATCCTGACCTTTATAGGCCAAACCG-CTGCAATCTC--G- 631 Query 595 GCCA---CAGGAATATTT-TCCATCTACATGATCCCACAGATCTTTGCTTACGCCGTTAA 650 |||| |||| || ||| ||||| |||||||||||||| |||||||| ||||| | || Sbjct 632 GCCATGGCAGGGAT-TTTCTCCATTTACATGATCCCACAAATCTTTGCCTACGCTATCAA 690 Query 651 -TTACCCAACCGCTAAATTCTTGCAATCACAAAGCAAAATCATGGTCATGGCTGCG-ATA 708 || |||||| || || || ||||||||||||||||| |||||||||||||||| | ||| Sbjct 691 CTT-CCCAACGGCGAAGTTTTTGCAATCACAAAGCAAGATCATGGTCATGGCTG-GAATA 748 Query 709 TCAGCGGT-T-GCACTTGT--TCTACACGTGCTCTTCACGTGGTTTGTCATTG-AGGGGC 763 || |||| | | ||||| || | | || ||||||||||| | |||| || || Sbjct 749 TC--CGGTGTGGTTCTTGTGATCCATA-GT-TTCTTCACGTGGCTAGTCA-TGTCTAGGT 803 Query 764 TCCAGTGGGGCAC-GGCGGGTCTAGCCGTCGTGCTTAACGCGTCGTGGTGGTTCATTGTC 822 | || ||||| || | ||| |||| | ||||||||| ||||||||||| |||| || Sbjct 804 TACACTGGGG-ACTTCCTGGTTTAGCTTTAGTGCTTAACACGTCGTGGTGGGTCATCGTT 862 Query 823 GTCGCACAGCTCGTGTACATATTTAGTGGCACATGTGGTGAAGCTTGGTCTGGATTCT-C 881 || ||||| || ||||| || |||| | | || ||||| || |||||||||||||| | | Sbjct 863 GTTGCACAACTTGTGTATATCTTTAATTGTACGTGTGGAGAGGCTTGGTCTGGATT-TAC 921 Query 882 CTGGGAAGCCTTCCATAATTTGT-GGAGTTTCGTTAGATTATCTTTGGCTTCTGCTGTTA 940 ||||| || || || ||||||| || |||| |||| ||| |||||||||||||||| | Sbjct 922 GTGGGAGGCTTTTCACAATTTGTGGGGGTTT-GTTAAATTGTCTTTGGCTTCTGCTGCCA 980 Query 941 TGCTTTGTTTGGAGGTGTGGTATCTCATGGCAGTCATACTATTTGCTGGATATTTGAAGA 1000 |||| ||||||||| | |||||| | |||||| || || ||||||||||||||||||||| Sbjct 981 TGCTCTGTTTGGAGATTTGGTATTTTATGGCACTCGTATTATTTGCTGGATATTTGAAGA 1040 Query 1001 ATGCTGA-GATCTCCGTAGCCGCTCTCTCCATCTGCATGAACATTTTGGGATGGACTGCA 1059 ||||||| | |||||||||| || |||||||| ||||||||||||||||||||| | || Sbjct 1041 ATGCTGAAG-TCTCCGTAGCTGCACTCTCCATATGCATGAACATTTTGGGATGGGCAGCT 1099 Query 1060 ATGATTGC-TATTGGGATGAACACAGCCGTAAGTGTGAGAGTGTCTAATGAACTAGGAGC 1118 ||| |||| | |||||| ||| |||| ||||||||||||||||| ||||| |||||||| Sbjct 1100 ATGGTTGCGT-TTGGGACAAACGCAGCAGTAAGTGTGAGAGTGTCAAATGAGCTAGGAGC 1158 Query 1119 AAAGC-ATCCAAGAACCGCGAAATTTTCTCTACTAGTGGCAGTGATAACATCGACA-CTG 1176 | || | |||||||| || || ||||||||| | ||||| |||||| |||||| | Sbjct 1159 TA-GCCACCCAAGAACGGCCAAGTTTTCTCTAGTTGTGGCTGTGATATTGTCGACAGCAA 1217 Query 1177 CTCGGACTTGCT-ATATCAATTG-CTCTACTCATCTTTAG-AGATCAATATCCATCG-TT 1232 | ||| | | | ||| || | | |||||| |||| | | || | || || || || Sbjct 1218 TTGGGA-T-GTTTATAGCAGCCGGC-CTACTCTTCTTCCGCA-ATGAGTA-CC--CGGTT 1270 Query 1233 TT-TT-GTGGGAGACGAAGAAGTCATCATTGTTGTTAAAGATCTTACACCAATTCTTACA 1290 || || |||| ||| |||||||| | | ||| |||| ||| || || ||||| ||| | Sbjct 1271 TTGTTTGTGGAAGATGAAGAAGTTAGAAATGTGGTTAGAGAACTCACGCCAATGCTTGC- 1329 Query 1291 CTCTC-CATTGTCATCAACAATGTCCAACCTGTCTTATCAGGGGTGGCTGTGGGAGCTGG 1349 || | |||||||||||||||||| |||||||| || || || |||||||||||||| || Sbjct 1330 CTTTTGCATTGTCATCAACAATGTTCAACCTGTATTGTCTGGAGTGGCTGTGGGAGCGGG 1389 Query 1350 ATGGCAAGCAGCCGTGGCGTACGTTAACATAGTC-TGCTATTACTTGTTTGGAATCCCAT 1408 ||||||||||| || ||||| || ||||||| | ||||| |||||||| ||| |||||| Sbjct 1390 ATGGCAAGCAGTTGTAGCGTATGTGAACATAG-CATGCTACTACTTGTTCGGAGTCCCAT 1448 Query 1409 TTGGTCTATTATTAGGATACAAGCTT-AACTTTGGCGTAATGGGAATTTGGTGCGGAATG 1467 ||||||||||||| |||| |||||| || | ||| ||||||||||||||||| || ||| Sbjct 1449 TTGGTCTATTATTGGGATTTAAGCTTGAA-TATGGAGTAATGGGAATTTGGTGGGGGATG 1507 Query 1468 TTGACGGGAACCGTGGTACAGA-CAATAGTCTTAACATTG-ATGATCTGCAGAACAAATT 1525 |||||||||| | || || | | |||||| | || ||| |||||||||| ||| |||| Sbjct 1508 GTGACGGGAACTTTTGTTCA-ATCGATAGTCCTGAC-TTGGATGATCTGCAAAACCAATT 1565 Query 1526 GGGACACAGAGGCTGCAATGGCTGAGGGTAGGATAAGA-AAGTGGGGAGGAG 1576 |||| | ||||||| ||||||| |||| ||||||| | || |||||||||| Sbjct 1566 GGGAGAAAGAGGCTTCAATGGCAGAGGAAAGGATAAAAGAA-TGGGGAGGAG 1616 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85541728680 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5