BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494224
Length=4379
Score E
Sequences producing significant alignments: (Bits) Value
AT5G47480.1 | Symbols: | RGPR-related | chr5:19257420-19263424... 6261 0.0
AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270800... 2492 0.0
> AT5G47480.1 | Symbols: | RGPR-related | chr5:19257420-19263424
FORWARD LENGTH=4345
Length=4345
Score = 6261 bits (3390), Expect = 0.0
Identities = 4090/4414 (93%), Gaps = 104/4414 (2%)
Strand=Plus/Plus
Query 1 ATGGCTTCGACTGCTGATTTCCTCCTGGAGGATCAAACGGACGAGGATTTCTTCGACAAA 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTCGACTGCTGATTTCCTCCTGGATGATCAAACGGACGAGGATTTCTTCGACAAA 60
Query 61 CTTGTTGATGATTCCTATACTCCTACCGCTTCATCCTCTGCTAAGGAGCTGAAATTCGAC 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 CTTGTTGATGATTCCTATACTCCTACCGCTTCATCCTCTGCCAAGGAGCTGAAATTCGAT 120
Query 121 GACGGTAGTGATTCCGATGACGCCAGAGCTTTTGCTAATCTCTCCGTCGTTGACGATGTT 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 121 GACGGTAGTGATTCCGATGACGCCAAAGCTTTTGCTAATCTCTCCGTCGTTGACGATGTT 180
Query 181 GTGGGTGATGGAGATGTCGCATTGAATGAAGCAGGTTTTGGGAACGATGTTGCAAACGAG 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 181 TTGGGTGATGGAGATGTCGCATTGAATGAAGCAGGTTTGGGGAACGATGTTGCAAACGAG 240
Query 241 GGTACTAGTGGTTCGGTGGGAAAAGAAGAGCCTTCTTCATCTATTGCTCCGGAAGCTCTT 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 241 GGTACAAGTGGTTCGGTGGGAAAAGAAGAGCCTTCTTCATCTATTGCTCCGGAAGCTGTT 300
Query 301 CAATTTGTCAACAGTGATGCAAATAAGTTAAGGGATGATGATGATGTGGTGAGATCGGGG 360
||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||| |
Sbjct 301 CAATTTGTCAACAGTGATGCAAATAGGTTAAGGGATG-T--TGATGTGGTGCGATCGGAG 357
Query 361 GTGGATGATATGCCACTAACTGAAAC-GGCAAAAGAAAGTAATATAGTCGATGGATCTGG 419
|||||||||||| ||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct 358 GTGGATGATATGGCACTAACTGAAACAGG-AAAAGAGAGTAATATAGTCGATGGATCTGG 416
Query 420 GAGTCCTGGGGTTAAGGAGGTTGGTTGGGGCTCCTTTTATGCCGATTCATCTGTAAATGA 479
||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 417 GAGTCCTGGGGTTAAGGAGGTTGACTGGGGCTCGTTTTATGCAGATTCATCTGTAAATGA 476
Query 480 CGGTCGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGTTGGATGGAACTGCAGGGGA 539
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 477 CGGTGGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGTTGGATGCAACTGCAGGAAA 536
Query 540 TTTACAGGGACAGGCCGAGGTAGCTGTGGCCACTGGAGGCAACTTAGTAGCCAATG---C 596
| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct 537 TGTACAGGGACAGGCGGAGGTAGCTGTGGCCACTGGAGGAAACTTAGTAGCCAATGATAC 596
Query 597 -----A-ACAAGTGTTGGTTTAGATAATTCGGCAGGGTTTGAGCAACACCATGGTCAAGT 650
| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 597 AATTAACACAAGTGTTGGTTTAGATAATTCGGCAGGCTTTGAGCAACACCAGGGTCAAGT 656
Query 651 GCAACACGATTCTGGAAGCGGGCAGTATGTGGATAATAGTCAATCTTGGGAAAATCTCTA 710
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 657 GCAACACGATTCTGGAAGCGGGCAGTATGTGGATAACAGTCAATCTTGGGAAAATCTCTA 716
Query 711 TCCTGGGTGGAAATATGATGCAAGTACTGGTCAATGGTATCAAGTTGATGGTCATGATGC 770
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 717 TCCTGGATGGAAATATGATGCAAGTACTGGTCAATGGTATCAAGTTGATGGTCAGGATGC 776
Query 771 AAGCGTGAATTCACAGGAGAGCTATACAAACTCAACAAGTAACTGGGAAAGCGTTGCTGC 830
|| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 777 AACCGTTAATTCACAGGAGAGCTATATTAACTCAACAGGTAACTGGGAAAGCGTTGCTGC 836
Query 831 TGATATCTCAGATGTTGCTTATCTGAAGCAGAGTACAACATCTGCAGCGGCCGGCACAGC 890
||||| ||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||
Sbjct 837 TGATAACTCGGATGTTGCTTATCTGAAACAGAGTACAACATCTGCAATGGCTGGCACAGC 896
Query 891 CGAGAGTGTGTCTACTTGGAACCAGGTTTCACAAGTGGGGAATGGATATCCAGAACACAT 950
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 897 TGAGAGTGTGTCTACATGGAACCAGGTTTCACAAGTGGGCAATGGATATCCAGAACACAT 956
Query 951 GGTCTTTGACGCTCAGTATCCTGGATGGTACTATGATACAATTGCTCAAGAGTGGCGCTC 1010
||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 957 GGTATTTGACGCCCAGTATCCTGGATGGTACTATGACACAATTGCTCAAGAATGGCGCTC 1016
Query 1011 TCTGGACAGCTACAACCAGGCTTCTCAAACAACTGTAACTGGTCAAGCTCATGATCAGCA 1070
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1017 TCTGGACAGCTACAACCAGGCTTCCCAAACAACTGTAACTGGTCAAGCTCATGATCAGCA 1076
Query 1071 AGTTCAGAATGGTCATGCTCATACAGCTACGTATCACAGTAATAGCCAGAGTAGTATGTA 1130
||||||||| |||||||||| |||| |||||||||||| |||||||||||||||| ||||
Sbjct 1077 AGTTCAGAACGGTCATGCTCGTACAACTACGTATCACAATAATAGCCAGAGTAGTGTGTA 1136
Query 1131 TGATGTTAACGACAAAAACCAGAGTTTCAAAGCGCAAGAATATGCTATGCAGAGCCAACA 1190
|||||||||| |||||||||||| |||||||||||||| | |||||| ||| |||||||
Sbjct 1137 TGATGTTAACAACAAAAACCAGACATTCAAAGCGCAAGACTTTGCTATTCAGGGCCAACA 1196
Query 1191 CGGAAGTTGGGACCAATCTTACTATGCCAACAATCAGCAGGCTGCAAACACTTGGCAATC 1250
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1197 CGGAAGTTGGGACGAATCTTACTATGCCAACAATCAGCAGGCTGGAAACACTTGGCAACC 1256
Query 1251 AGTAAATGTAGGTCAGGCTGAGCCTGCTATAAATTCTAATTCATTATCAAGCTTCAGAGG 1310
||||||||||||| ||||||||||||| ||| |||| ||||||||||| ||||| ||||
Sbjct 1257 AGTAAATGTAGGTAAGGCTGAGCCTGCGGTAACTTCTGATTCATTATCACGCTTCGGAGG 1316
Query 1311 AAACCAGCATGTAAATAATTTGTACAGTACAGAACCTGTGGCTGAACAGTTTAAGCCAAA 1370
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1317 AAACCAGCAAGTAAATAATTTGTACAGTACAGAATCTGTGGCTGAACAGTTTAAGCCAAA 1376
Query 1371 TGCGATTGGAGCGCAGAGCTTCATCCCGCAGCATATGAATGTGGCTAGTGTCACACAGAA 1430
| |||||||||| |||||||| ||||| |||||||||||||||||||||| |||||| ||
Sbjct 1377 TACGATTGGAGCCCAGAGCTTTATCCCTCAGCATATGAATGTGGCTAGTGCCACACAAAA 1436
Query 1431 TGGACCATTGAGTTTCTCAAACGGTGTCTATAATAGACAGCAATCTGTAGATGATGCTCA 1490
||||||||||||||||||||||| | | ||||||||||||||||| |||||| |||||||
Sbjct 1437 TGGACCATTGAGTTTCTCAAACGATTTGTATAATAGACAGCAATCGGTAGATCATGCTCA 1496
Query 1491 TCAGTCTTTTCAGAACAATCAGCTTTTCTCCCCAAGTGCGGGAAGATCATCTGAT-GGTC 1549
|||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
Sbjct 1497 AAAGTCTTTTCAGAACAATCAGCTTTTCTCCCCAAGTGTGGGAAGATCATCTGATAGG-C 1555
Query 1550 GTCCACCACATGCGCTTGTCAGTTTTGGATTTGGTGGGAAGCTCATTCTTATGAAGGAT- 1608
|||||||||| || || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1556 GTCCACCACACGCACTAGTCAGTTTTGGATTTGGTGGGAAGCTCATTGTTATGAAGGATA 1615
Query 1609 ATAAATGGTTCTCTGCAGAATTCATCATTTGGAAGTCAGGGAATTGGGGGAAGCTCCGCC 1668
|| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |
Sbjct 1616 AT-AATGGTTCTCTGCAGAATACATCATTTGGGAGTCAGGGGATTGGGGGAAGCTCCATC 1674
Query 1669 TCTGTCTTAAACTTGGCAGAAGTTATTTCTGGGAGTGCCTCTTATTCCAGTCAAGGGGAA 1728
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1675 ACTGTCTTAAACTTGGCAGAAGTTATTTCTGGGAGTGCCTCTTATTCCAGTCCCGGGGAA 1734
Query 1729 GACTCTTTGAGCTACTTTCGTTGCCTGCATCAACAATCTCTTCCAGGTCCTTTGGTAGGA 1788
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1735 GACTCTTTGAGCTACTTTCGTTGTCTGCATCAACAATCTCTTCCAGGCCCTTTGGTAGGG 1794
Query 1789 GGAAATGTTGGAAGTAAAGAGTTGCACAAGTGGATTGATGAGAGAATTTTGAATTGTGAA 1848
|||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||
Sbjct 1795 GGAAATGTTGGAAGTAAAGAGTTGCATAAGTGGATTGATGAGAGACTCTTGCATTGTGAA 1854
Query 1849 TCTTCCTATATGGATTTTTCAAGAGGGAAACTCTTAAAGATGCTTCTTTGTTTACTCCGA 1908
|||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct 1855 TCTTCCAACATGGATTTTTCAAGAGGGAAACTCTTAAAGATGCTTCTTTCTTTGCTCAGA 1914
Query 1909 ATATCTTGTCAGTATTATGGGAAACTCCGTTCTCCTTTTGG-TACTGATGCATCGCAAAA 1967
||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||
Sbjct 1915 ATATCTTGTCAGTATTATGGGAAACTCCGATCTCCTTTTGGCT-CTGATGCATCGCAAAA 1973
Query 1968 GGAAACGGACT-CTGCTGAAGCAGCAGTCGCTAAGCTTTTTGCATTTGCAAAGAAAGATG 2026
||||||||| | || | ||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct 1974 GGAAACGGA-TACTCCAGAAGCAGCAGTTGCTAAACTTTTTGCATTTGCCAAGAAAGATG 2032
Query 2027 GCTTACAAAATGGTTATGCTCCTATTAGCCAATGCTTGCAGCATTTACCACCTGAATCAC 2086
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2033 GCATCCAAAATGGTTATGCTCCTATTAGCCAATGCTTGCAGCATTTACCACCTGAATCGC 2092
Query 2087 AAATGCAAGTAACTGCTTCAGAGGTTCAGAATCTTCTGGCTTCTGGTAGAAAAATGGAGG 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2093 AAATGCAAGTAACTGCTTCAGAGGTTCAGAATCTTCTGGCTTCTGGTAGAAAAATGGAGG 2152
Query 2147 CTCTACAATGTGCACAAGAAGGCCATTTATGGGGAATAGCGCTTGTTATCGCGGCACAAC 2206
||||||||||||| ||||||||||||||||||||| || ||||| |||||||| ||||
Sbjct 2153 CTCTACAATGTGCGCAAGAAGGCCATTTATGGGGACCGGCACTTGTCATCGCGGCTCAAC 2212
Query 2207 TTGGGGATCAGTTCTATGTAGACACTGTGAAACAAATGGCCCTTCGCCAGCTGATACCAG 2266
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2213 TTGGGGATCAGTTCTATGTAGACACTGTGAAACAAATGGCCCTTCGCCAGCTGATACCCG 2272
Query 2267 GGTCACCTTTACGGACATTGTGCCTACTGGTTGCAGGACAACCAGCTGAAGTGTGTCCCG 2326
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 2273 GGTCACCTTTACGGACATTGTGCCTACTCGTTGCGGGACAACCAGCTGAAGTGTGTCCCA 2332
Query 2327 CTGGAAGTAGTAG---CATGCTTGACAATTGGGAAGAGAATTTGGGTATAATAACTGCTA 2383
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2333 CTGGAAGTAGTAGTAGCATGCTTGACAATTGGGAAGAGAATTTGGGTATAATAACTGCTA 2392
Query 2384 ACAGAACCACAGATGATGAGCTTGTGATTACTCATCTTGGAGATCGCATGTGGAAAGATA 2443
|||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||| |
Sbjct 2393 ACAGAACCACAGATGACGACCTTGTGATTATTCATCTTGGAGATAGCATGTGGAAAGAAA 2452
Query 2444 G-GGGCGAGATAATTGCGGCGCATATTTGCTATTTAATCGCGGACAAGAACTTTGATCCA 2502
| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2453 GAGGG-GAGATAATTGCGGCGCATATTTGCTATTTAATCGCAGACAAGAACTTTGATCCA 2511
Query 2503 TACTCAGAAAGCGCCAGACTCTGCCTTGTCGGAGCAGACCATTGGAAATGTCCTCGAACA 2562
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2512 TACTCAGAAAGCGCCAGACTCTGCCTTGTCGGAGCGGACCATTGGAAATGTCCTCGAACA 2571
Query 2563 TACGCAAGTCCAGAGGCTATACAGAGGACAGAGTTATATGAATACTCTAAGACGCTGGGA 2622
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2572 TACGCAAGTCCAGATGCTATACAGAGAACAGAGTTATATGAATACTCTAAGACGCTGGGA 2631
Query 2623 AATTCTCAGTATATCCTGTTACCGTTTCAACCATATAAAATCATATATGCCCATATGCTG 2682
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2632 AACTCTCAGTATATCCTGTTACCGTTTCAACCATATAAAATCATATATGCTCATATGCTG 2691
Query 2683 GCTGAAGTTGGTAAACTTTCGACTGCGCTGAAGTACTGTCAAGCAGTATTAAAATGCCTC 2742
|||||||||||||||||||| ||||| | |||||||||||||||||| ||| |||||||
Sbjct 2692 GCTGAAGTTGGTAAACTTTCTACTGCACAAAAGTACTGTCAAGCAGTAATAAGATGCCTC 2751
Query 2743 AAGAC-AGGCCGATCACCAGAAGTGGAAATGTGGAAACAGTTTGTTTCATCTCTTGAAGA 2801
||||| || ||||||| | ||||| ||||||||||| ||||||| |||||||||||||||
Sbjct 2752 AAGACTAG-CCGATCATCTGAAGTAGAAATGTGGAAGCAGTTTGCTTCATCTCTTGAAGA 2810
Query 2802 GAGAATCCGTATCCACCAACAGGGCGGGTATACTGCGAATATGGCCCCAGCAAAACTTGT 2861
||||||||||| ||| ||| |||| ||| | | | | |||||||||||||||||||
Sbjct 2811 GAGAATCCGTAGCCATCAAGAGGGTGGG-A-A-T-----T-TGGCCCCAGCAAAACTTGT 2861
Query 2862 TGGAAAGTTCCTGAACTTTATTGATACTACAGCATCTCGTGTTGTTGGGGGGATGCCACC 2921
||||||| | || || || ||| | | | ||| | |||| ||||||||
Sbjct 2862 TGGAAAG--C-TG--CT-----GA-ACT-C----T-T--TGT-G--GGGG--ATGCCACC 2897
Query 2922 ACCTGCACCACATTCAACAACCGGAAACCTGCCGGTAAATGACTATCAACATCAACAGCA 2981
||||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||
Sbjct 2898 ACCTGCACCACATTCAACAACTGGAAACCCGCAGGTAAATGAGTATCAACATCAACAGCA 2957
Query 2982 GGAAGCAGCTAAGTTATCATATAGTCAATCGGCTAATACAATGTCATCATTGATGCCACC 3041
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2958 GGAAGCGGCTAAGTTATCATATAGTCAATCCGCTAATACAATGTCATCATTGATGCCACC 3017
Query 3042 TGCTTCTTCAATTGAACCCGTGCGTGAGTTGGGTGGGAACGGGAGGACAATGGCAGCACA 3101
|||||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct 3018 TGCTTC---AATTGAACCCGTACATGAGTGGGGTGGGAACGGGAGGACAATGGCAGCACA 3074
Query 3102 TTCTAGAAGTGTATCAGAACCAGATTTCGGTAGGACGCCAATACAGGATCAGACTGACTC 3161
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 3075 TTCTAGAAGTGTATCAGAGCCAGATTTCAGTAGGACGCCAATACAGGATCAGACTGACTC 3134
Query 3162 CTCAAAAGACAAAGCTGCTGATGGGGTGACACAGGTGAAAGCAACTCGTA-GTGTGCCAA 3220
|||||||||||||||| ||||||||||||||||||||||| ||||||| | | |||||||
Sbjct 3135 CTCAAAAGACAAAGCTCCTGATGGGGTGACACAGGTGAAATCAACTCGGAAG-GTGCCAA 3193
Query 3221 GTTCTCGGTTTAGCCGCTTTGGTATTGGAATACTGAAGA-----G--GG-----TCTTAC 3268
|||||||||||||||||||||||||||| ||| |||||| | || |||| |
Sbjct 3194 GTTCTCGGTTTAGCCGCTTTGGTATTGGCATATTGAAGAACACTGTAGGGAAGGTCTTCC 3253
Query 3269 CATCTCGTTCATCTAAAGAGGCAAAACTGGGTGACGAGAATCAATTCTACTATGACGATA 3328
||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||
Sbjct 3254 CATCTCGATCATCTAATGAGGCAAAACTGGGTAATGAGAATCAATTCTACTATGACGATA 3313
Query 3329 ATCTAAAGAGATGGGTGGAAAGAGGTGTGGAACCCCCAGCTGAGGAAGCTGCACTACCTC 3388
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3314 ACCTAAAGAGATGGGTGGAAAGAGGTGTGGAACCCCCAGCTGAGGAAGCTGCACTACCTC 3373
Query 3389 CTCCTCCAACGTTAGGCGCATTCCGAAGCAACTCATTGGGTTATGAAAACAAATCTGACA 3448
|||||||||||| || | ||||||||||||||||||||||| |||||||||| ||||| |
Sbjct 3374 CTCCTCCAACGTCAGTCCCATTCCGAAGCAACTCATTGGGTCATGAAAACAAGTCTGAGA 3433
Query 3449 TGAAGAACGAGATGTCTCCATCTAGTGGGAGCTGGAGTAGTGGCAGCCCAACTCCGTCAG 3508
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3434 TAAAGAACGAGATGTCTCCATCTAGTGGGAGCTGGAGTAGTGGCAGCCCAACTCCGTCAG 3493
Query 3509 AGAATTCTTCGGGAATCCCACCAGTATCACAGGGCTCAAACCAATTCTCAGCTCGTGGAC 3568
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3494 AGAATTCTCCGGGAATCCCACCAGTCTCACAGGGCTCAAACCAATTCTCAGCTCGTGGAC 3553
Query 3569 GTATGGGTGTGCGTGCAAGATACGTTGACACCTTTAATCAAGGCCGTGGAAACTCCTCGA 3628
||||||||||||||||||| ||||||||||||| |||||||||| | | | ||||
Sbjct 3554 GTATGGGTGTGCGTGCAAGGTACGTTGACACCTATAATCAAGGC--T-----C-C-TCGA 3604
Query 3629 GCATGTATCAGTCACCTCCCGTACAATCTGCTAAACCACCGATTCCTGCAAAAGCAAAAT 3688
|||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||
Sbjct 3605 GCATGTATCAGTCACCTCCCGTGCAATCTTCTAAACCACCGATTCCTGCGAAAGCAAAAT 3664
Query 3689 TCTTCGTCCCAGCAGCACCGGCATCGTTTGCAAACGACCAGGTAATGGAATCGGTTAGTG 3748
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3665 TCTTTGTCCCAGCAGCACCGGCATCGTTTGCAAACGACCAGGTAATGGAATCGGTTAGTG 3724
Query 3749 ATGAAACCAGACAGGAGAACTCAGCAGATGAAG-AGGTAGTAGGGTCTGCAGGCGCTCCA 3807
|||||||||||| |||||||||| |||||||| || ||||||| |||||||||||||||
Sbjct 3725 CTGAAACCAGACAAGAGAACTCAGGAGATGAAGCAG-TAGTAGGCTCTGCAGGCGCTCCA 3783
Query 3808 GGACCAAGCCAGTCTTCATTCCAGTCCCCGACACCATCTCCAATGGCAATGCAGAGATTT 3867
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3784 GGACCAAGCCAGGCTTCATTCCAGTCCCCGACACCATCTCCAATTGCAATGCAGAGATTT 3843
Query 3868 CCAAGTCTAGACAACATCAAAAGAAGTGGATCAGGAATAAGCCTTAATGGTGATCTTCCT 3927
|||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 3844 CCAAGTGTAGACAACATCAGAAGAAGTGGATCAGGAACAAGCCTTAATGGTGATCTTCCT 3903
Query 3928 CCGTCAGGATCAAGAAGAACAGCTTCATGGAGCGGAAGCGTCAACAGCTCGTCGTTTATG 3987
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3904 CAGTCAGTATCAAGAAGAACAGCTTCATGGAGCGGAAGCGTCAACAGCTCGTCGTTTATG 3963
Query 3988 TCTCCAACGAGTGCATCAACATTCAAACCAAGCCCACTGAACAGTAGCAGTAGCAGCTTA 4047
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3964 TCTCCAACGAGTGCATCAACATTCAGACCAAGCCCACTGAACAGTAGCAGTAGCAGCTTA 4023
Query 4048 GGAGAGGAGCTTCAGGAAGTGGAACTGTAAGTTGAAAAATCTGTAATATCacaacaacaa 4107
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||
Sbjct 4024 GGAGAGGAGCTTCAGGAAGTTGAACTGTAAGTTGAAAAATCTGTAATATCACAA-AAGAA 4082
Query 4108 caacaaaaagttttgctcactgtcacaacaacaacaGGTTAGATCGATCAATCAATCAAA 4167
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 4083 -AA-AAAAAGTTTTGCTCACTGTCACAACA------GGTTAGATCGATCAATCAATCAAA 4134
Query 4168 TGTGAATCCATGAGTTACCC-AAAATTACATAAAACACTTACTCTGCTTCTGTCAACGAC 4226
||| |||||||||||||||| |||||||||| || ||||| ||||||||||||||| |||
Sbjct 4135 TGTTAATCCATGAGTTACCCCAAAATTACATGAAGCACTTTCTCTGCTTCTGTCAATGAC 4194
Query 4227 -GGGGGCAAATATGTATTATGCCGTTTGTAAtttttttttcttttttttttCTAAATATA 4285
||||||||||||||||||||||||||||| ||||||||| | |||| || |||||||||
Sbjct 4195 AGGGGGCAAATATGTATTATGCCGTTTGTA-TTTTTTTTT-TATTTTCTTACTAAATATA 4252
Query 4286 AATTCATTAATTTTTCTTTGTTAACAGACTTGAGGAATTACACAATAATGCACATTAATA 4345
|||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4253 AATTCATTAAATTT-CTTTGTTAACAGACTTGAGGAATTACACAATAATACACATTAATA 4311
Query 4346 TTTCGTTTATGAGTGATAATCAAATTTGTTCACC 4379
||||||| ||||||| |||| |||||||||||||
Sbjct 4312 TTTCGTTCATGAGTGGTAATGAAATTTGTTCACC 4345
> AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270800
FORWARD LENGTH=4399
Length=4399
Score = 2492 bits (1349), Expect = 0.0
Identities = 2044/2370 (86%), Gaps = 85/2370 (4%)
Strand=Plus/Plus
Query 1 ATGGCTTCGACTGCTGATTTCCTCCTGGAGGATCAAACGGACGAGGATTTCTTCGACAAA 60
||||||||| || || | ||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 1 ATGGCTTCGGCTTCTCAATTCCTGCTGGAGGATCAGACGGATGAGGATTTCTTCGACAAG 60
Query 61 CTTGTTGATGATTCCTATACT----CC-TA-C-C--GCTTCATCCTCTGCT-AAGGAGCT 110
|||||||||||| | ||| || || | | | ||||||||||||| | | ||||||
Sbjct 61 CTTGTTGATGATGCTTATTCTCCCACCGAAGCTCAGGCTTCATCCTCTG-TGACGGAGCT 119
Query 111 GAAATTCGACGACGGTAGTGATTCCGATGACGCCAGAGCTTTTGCTAATCTCTCCGTCGT 170
||| |||||||| | ||||| |||||||| |||||||||| | |||||||| | |
Sbjct 120 GAAGTTCGACGATGAAAGTGACTCCGATGATATCAGAGCTTTTTCGAATCTCTCTATTGG 179
Query 171 TGACGAT-GTTGTGGG-TGATGGAGATGTCGCATTGAATGAAGCAGGTTTT-GGGAACGA 227
| | ||| || |||| || ||||||| | || ||||||||||| |||| ||||||||
Sbjct 180 TAAAGATCCTT-TGGGCGGA-GGAGATGGCACACTGAATGAAGCA-ATTTTGGGGAACGA 236
Query 228 TGTTGCAAACGAGGGTACTAGTGGTTCGGTGGGAAAAGAAGAGCCTTCTTCATCTATTGC 287
|||||||||||||||| | || ||||||||||| |||| ||| | |||||||||||||
Sbjct 237 TGTTGCAAACGAGGGTGCAAGCGGTTCGGTGGGGGAAGACGAG-C--CTTCATCTATTGC 293
Query 288 TCCGGAAGCTCTTCAATTTGTCAACAGTGATGCAA-ATAAGTTAAGGGATGATGATGATG 346
|||||||||| |||||||| | | |||||||||| || |||| || ||||||||
Sbjct 294 TCCGGAAGCTGTTCAATTTCCCCATAGTGATGCAAGGGAA-TTAA--GA-GATGATGA-- 347
Query 347 TGGTGAGATCGGGGGTGGATGATATGCCACTAACTGAAACGGCAAAAGAAAGTAATATAG 406
||||||||| ||| | ||||||||||||| ||||||| ||||||||| | | ||||
Sbjct 348 -AATGAGATCGGAGGTAGCTGATATGCCACTATCTGAAACAGCAAAAGAATGCACGATAG 406
Query 407 TCGATGGA-TCTGGGAGTCCTGGGGTTAAGGAGGTTGGTTGGGGCTCCTTTTATGCCGAT 465
| | || | |||| |||||||||||||||| | | |||||| || ||| |||| |||
Sbjct 407 T-TAACGAGCCCGGGATTCCTGGGGTTAAGGAGCTAGATTGGGGTTCATTTGATGCGGAT 465
Query 466 TCATCTGTAAATGACGGTCGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGTTGGAT 525
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 466 TTATCTGTAAATGACGGTCGTGGGTTTGGTTCATACTCTGATTTCTTCACTGAGCTGGAT 525
Query 526 GGAACTGCAGGGGATTTACAGGGACAGGCCGAGGTAGCTGTGGCCACTGGAGGCAACTTA 585
| ||||||||| ||||||||||| |||| || |||||||||||||||||||| ||||||
Sbjct 526 GCAACTGCAGGAAATTTACAGGGAAAGGCGGATGTAGCTGTGGCCACTGGAGGAAACTTA 585
Query 586 GTAGCCAATGCA-ACAAGTGTTGGTTTAGATAATTCGGCAGGGTTTGAGCAACACCATGG 644
|||||||||| | |||| | | | || | | ||||||||||||||||| ||
Sbjct 586 GTAGCCAATG-ATACAA-------ATAACACAAGT--GTTGGGTTTGAGCAACACCAGGG 635
Query 645 TCAAGTGCAACACGATTCTGGAAGCGGGCAGTATGTGGATAATAGTCAATCTTGGGAAAA 704
|||| |||| |||||||||| |||||||||||| |||||||| |||||||||||||||||
Sbjct 636 TCAATTGCACCACGATTCTGCAAGCGGGCAGTACGTGGATAACAGTCAATCTTGGGAAAA 695
Query 705 TCTCTATCCTGGGTGGAAATATGATGCAAGTACTGGTCAATGGTATCAAGTTGATGGTCA 764
|||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 696 TCTCTATCCTGGATGGAAATATGATGCAAGTACTGGTCAGTGGTTTCAAGTTGATGGTCA 755
Query 765 TGATGCAAGCGTGAATTCACAGGAGAGCTAT-ACAAACTCAACAAGTAACTGGGAAAGCG 823
|||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||| ||
Sbjct 756 TGATGCAAGCATGAATTCACAGGAGAGCTATGA-AAACTCAACTAGTAACTGGGAAAACG 814
Query 824 TTGCTGCTG-ATATCTCAGATGTTGCTTATCTGAAG-CAGAGTACAACATCTGCAGCGGC 881
||||||| | | | ||| ||||||||||||| | || ||||||||| ||||||||| |||
Sbjct 815 TTGCTGC-GAACAACTCGGATGTTGCTTATCAG-AGACAGAGTACAGCATCTGCAGTGGC 872
Query 882 CGGCACAGCCGAGAGTGTGTCTACTTGGAACCAGGTTTCACAAGTGGGGAATGGATATCC 941
||||||| |||| ||| ||||||||||||||||||||||||||| | ||||| |||||
Sbjct 873 TGGCACAGTTGAGAATGTTTCTACTTGGAACCAGGTTTCACAAGTGAGCAATGGGTATCC 932
Query 942 AGAACACATGGTCTTTGACGCTCAGTATCCTGGATGGTACTATGATACAATTGCTCAAGA 1001
||||||||||||||||||| | |||||||| |||||||||||||| ||||||||||||||
Sbjct 933 AGAACACATGGTCTTTGACTCCCAGTATCCGGGATGGTACTATGACACAATTGCTCAAGA 992
Query 1002 GTGGCGCTCTCTGGACAGCTACAACCAGGCTTCTCAAACAACTGTAACTGGTCAAGCTCA 1061
||||||||||| ||||||||||||||||||| || | ||| ||||||||||||| |
Sbjct 993 ATGGCGCTCTCTTGACAGCTACAACCAGGCTTTTC--A-AAC---AACTGGTCAAGCTAA 1046
Query 1062 TGATCAGCAAGTTCAGAATGGTC-ATGCTCATACAGCTACGTATCACAGTAATAGCCAGA 1120
||||||||||||||||||||| | || || ||||||| | | | || || ||| |||
Sbjct 1047 TGATCAGCAAGTTCAGAATGG-CAATTCTTTTACAGCTGTGGA-C-CA-TAGTAG--AGA 1100
Query 1121 GTAGT-ATGT--ATGATGTTAACGACAAAAACCAGAGT-TTCA-AAGCGCAAGAATATGC 1175
| ||| | || |||||||| |||| ||||| |||| | ||| || | ||| ||| ||
Sbjct 1101 G-AGTAACGTACATGATGTTTACGATAAAAATCAGA-TACTCAGAA-CACAAAAATTTGA 1157
Query 1176 TATGCAGAGCCAACACGGAAGTTGGGACCAATCTTACTATGCCAACAATCAGCAGGCTGC 1235
||| ||||||||||| ||||||||||| ||||| ||||||| ||| |||||||||||| |
Sbjct 1158 TATCCAGAGCCAACATGGAAGTTGGGATCAATCGTACTATGACAAAAATCAGCAGGCTAC 1217
Query 1236 AAACACT-TGGCAATCAGTAAATGTAGGT-CAGGCTGAGCCTGCTATAAATTCTAATTCA 1293
||||| | |||||| ||| ||||| |||| | ||||||| | ||| | | | || |||
Sbjct 1218 AAACA-TGTGGCAACCAGAAAATGCAGGTGC-GGCTGAGGCGGCTGTGACTCCTGCCTCA 1275
Query 1294 TTATCAAGCTTCAGAGGAAACCAGCATGTAAATAATTTGTACAGTACAGAACCTGTGGCT 1353
||||||| || | ||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1276 TTATCAAACTCCGGAGGAAACCAGCAAGTAAATAATTTGTACAGTACAGGACCTGTGGCT 1335
Query 1354 GAACAGTTTAAGCCAAATGCGATTGGAGCGCAGAGCTTCATCCCGCAGCATATGAATGTG 1413
||||||||||||||| ||| || ||| | ||||||||||| || |||||||||||||||
Sbjct 1336 GAACAGTTTAAGCCATATGAGAGTGGCGTTCAGAGCTTCATTCCTCAGCATATGAATGTG 1395
Query 1414 GCTAGTGTCACACAGAATGGA-CCATTGAGTTTCTCAAACGGTGTCTATAATAGACAGCA 1472
|||| |||||| ||||||||| ||| |||||||||| |||||| | |||| ||||||| |
Sbjct 1396 GCTAATGTCACGCAGAATGGACCCA-TGAGTTTCTCGAACGGTTTTTATAGTAGACAGGA 1454
Query 1473 ATCTGTAGATGATGCT-CATCAGTCTTTTCAGAACAATCAGCTTTTCTCCCCAAGTGCGG 1531
|||||||||||||||| || ||||| ||||||| || ||||||||||||||||||||| |
Sbjct 1455 ATCTGTAGATGATGCTCCA-CAGTCATTTCAGAGCAGTCAGCTTTTCTCCCCAAGTGCAG 1513
Query 1532 GAAGATCATCTGATGGTCGTCCACCACATGCGCTTGTCAGTTTTGGATTTGGTGGGAAGC 1591
|||||||||||||||| |||||||||||||| ||||||| |||||||||||| || ||||
Sbjct 1514 GAAGATCATCTGATGGGCGTCCACCACATGCACTTGTCAATTTTGGATTTGGCGGAAAGC 1573
Query 1592 TCATTCTTATGAAGGA-TATAAATGGTTCTCTGCAGAATTCATCATTTGGAAGTC---AG 1647
|||||||||||||||| || | ||||||||| |||||||||||||||||||||| ||
Sbjct 1574 TCATTCTTATGAAGGACGAT-AGTGGTTCTCTCCAGAATTCATCATTTGGAAGTCAGAAG 1632
Query 1648 GGAATTGGGGGAAGCTCCGCCTCTGTCTTAAACTTGGCAGAAGTTATTTCTGGGAGTGCC 1707
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 GGAACTGGGGGAAGCTCCATCTCTGTCTTAAACTTGGCAGAAGTTATTTCTGGGAGTGCC 1692
Query 1708 TCTTATTCCAGTCAAGGGGAAGACTCTTTGAGCTACTTTC-GTTGCCTGCATCAACAATC 1766
|||||||| |||| || ||| |||||||||| ||||| | |||| ||| ||||||||||
Sbjct 1693 TCTTATTCAAGTCTCGGAGAAAACTCTTTGAGTTACTT-CAGTTGTCTGGATCAACAATC 1751
Query 1767 TCTTCCAGGTCCTTTGGTAGGAGGAAATGTTGGAAGTAAAGAGTTGCACAAGTGGATTGA 1826
||||||||| || ||||| ||||||||||||||||||||||| || || |||||| ||||
Sbjct 1752 TCTTCCAGGACCCTTGGTTGGAGGAAATGTTGGAAGTAAAGACTTACATAAGTGGCTTGA 1811
Query 1827 TGAGAGAATTTTGAATTGTGAATCTTCCTATATGGATTTTTCAAGAGGGAAACTCTTAAA 1886
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct 1812 TGAGAGAATTTTGAATTGTGAATCTTCCTACATGGACTTTTCAAGAGGGAAACTTTTAAA 1871
Query 1887 GATGCTTCTTTGTTTACTCCGAATATCTTGTCAGTATTATGGGAAACTCCGTTCTCCTTT 1946
||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1872 GATGCTTCTTTCTTTGCTCAGAATATCTTGTCAGTATTATGGGAAACTCCGTTCTCCTTT 1931
Query 1947 TGGTACTGATGCATCGCAAAAGGAAACGGACTCTGCTGAAGCAGCAGTCGCTAAGCTTTT 2006
|||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1932 TGGTTCCGATGCATTGCAAAAGGAAACGGACTCTGCTGAAGCAGCAGTCGCTAAGCTTTT 1991
Query 2007 TGCATTTGCAAAGAAAGATGGCTTACAAAATGGTTATGCTCCTATTAGCCAATGCTTGCA 2066
|||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 1992 TGCAATTGCCAAGGAAGATGGCGTACAAAATGGTTATGCTCCTATTAGCCAATGCTTACA 2051
Query 2067 GCATTTACCACCTGAATCACAAATGCAAGTAACTGCTTCAGAGGTTCAGAATCTTCTGGC 2126
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2052 GCATTTACCACCGGAATCACAAATGCAAGTAACTGCTTCAGAGGTGCAGAATCTTCTGGC 2111
Query 2127 TTCTGGTAGAAAAATGGAGGCTCTACAATGTGCACAAGAAGGCCATTTATGGGGAATAGC 2186
|||||| || || ||||||||||| ||||||||||||||||| |||||||||||| |||
Sbjct 2112 TTCTGGCAGGAAGATGGAGGCTCTCCAATGTGCACAAGAAGGTCATTTATGGGGACCAGC 2171
Query 2187 GCTTGTTATCGCGGCACAACTTGGGGATCAGTTCTATGTAGACACTGTGAAACAAATGGC 2246
|||||||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||
Sbjct 2172 GCTTGTTATCGCAGCACAACTTGGGCAACAGTTCTATGTTGACACTGTGAAACAAATGGC 2231
Query 2247 CCTTCGCCAGCTGATACCAGGGTCACCTTTACGGACATTGTGCCTACTGGTTGCAGGACA 2306
||||||||||||| |||| |||||||||||||| ||| ||||||| ||||||||||| ||
Sbjct 2232 CCTTCGCCAGCTGGTACCCGGGTCACCTTTACGAACACTGTGCCTGCTGGTTGCAGGGCA 2291
Query 2307 ACCAGCTGAAGTGTGTC-CCGCTGGAAGTA 2335
|||||||||||||| || || |||||||||
Sbjct 2292 ACCAGCTGAAGTGT-TCTCCACTGGAAGTA 2320
Score = 1591 bits (861), Expect = 0.0
Identities = 1313/1521 (86%), Gaps = 71/1521 (5%)
Strand=Plus/Plus
Query 2328 TGGAAGTAGTAGCATGCTTGACAATTGGGAAGAGAATTTGGGTATAATAACTGCTAACAG 2387
|||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||
Sbjct 2376 TGGATGTAGTAGCATGCTTGACAGTTGGGAAGAGAATTTGGGTATAATTACTGCGAACAG 2435
Query 2388 AACCACAGATGATGAGCTTGTGATTACTCATCTTGGAGATCGCATGTGGAAAGATAGGGG 2447
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 2436 AACCACAGATGATGAGCTTGTGATTACTCATCTTGGAGATTGCATGTGGAAAGAAAGGGG 2495
Query 2448 CGAGATAATTGCGGCGCATATTTGCTATTTAATCGCGGACAAGAACTTTGATCCATACTC 2507
|||||| |||||||| ||||||||||||||||| ||||| |||||||||||| |||||||
Sbjct 2496 CGAGATTATTGCGGCCCATATTTGCTATTTAATTGCGGATAAGAACTTTGATACATACTC 2555
Query 2508 AGAAAGC-GCCAGACTCTGCCTTGTCGGAGCAGACCATTGGAAATGTCCTCGAACATACG 2566
||| | | |||||||| |||||||| ||||| || || ||||||| |||||||||||| |
Sbjct 2556 AGATA-CTGCCAGACTGTGCCTTGTTGGAGCGGATCACTGGAAATATCCTCGAACATATG 2614
Query 2567 CAAGTCCAGAGGCTATACAGAGGACAGAGTTATATGAATACTCTAAGACGCTGGGAAATT 2626
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 2615 CAAGTCCAGAGGCTATACAGAGAACAGAGTTATATGAATACTCTAAGACGCTGGGAAACT 2674
Query 2627 CTCAGTATATCCTGTTACCGTTTCAACCATATAAAATCATATATGCCCATATGCTGGCTG 2686
||||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2675 CTCAGTATACCCTGTTAACGTTTCAACCATATAAAGTCATGTATGCCCATATGCTGGCTG 2734
Query 2687 AAGTTGGTAAACTTTCGACTGCGCTGAAGTACTGTCAAGCAGTATTAAAATGCCTCAAGA 2746
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 2735 AAGTTGGTAAACTTTCGACTGCACAAAAGTACTGTCAAGCAGTATTAAAATGCCTCAAGA 2794
Query 2747 CAGGCCGATCACCAGAAGTGGAAATGTGGAAACAGTTTGTTTCATCTCTTGAAGAGAGAA 2806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2795 CAGGCCGATCACCAGAAGTGGAAATGTGGAAACAGTTTGTTTCATCTCTTGAAGAGAGAA 2854
Query 2807 TCCGTATCCACCAACAGGGCGGGTATACTGCGAATATGGC-CCCAGCAAAACTTGTTGGA 2865
|||||||||||||||||||||||||||| |||||| | | ||||| |||||||||||||
Sbjct 2855 TCCGTATCCACCAACAGGGCGGGTATACAGCGAATTTA-CACCCAGAAAAACTTGTTGGA 2913
Query 2866 A-AGTTCCTGAACTTTATTGATACTACAG-CATC-TCGTGTTGTTGGGGGGATGCCACCA 2922
| | | | |||||| ||| || || || || | |||| ||||||||| |||||||||
Sbjct 2914 GTACTGC-TAAACTTTTTTGGTAGTA-AGACA-CATCGTCCTGTTGGGGGCATGCCACCA 2970
Query 2923 CCTGCACCACATTCAAC-AACCGGAAACCTGCCGGTAAATGACTATCAACATCAACAGCA 2981
||||||||||||||||| || |||||||| | || |||||| |||||||||||||||||
Sbjct 2971 CCTGCACCACATTCAACCAAA-GGAAACCTACAGGGAAATGAGTATCAACATCAACAGCA 3029
Query 2982 GGAAGC-AGCTAAGTTATCATATAGTCAATCGGCTAATACAATGTCATCATTGATGCCAC 3040
|||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3030 GGAAGCTA-CTAAGTTAGCATATAGTCAATCGGTTAATACAATGTCATCATTGATGCCAC 3088
Query 3041 CTGCTTCTTCAATTGAACCCGTGCGTGAGTTGGGTGGGAACGGGAGGACAATGGCAGCAC 3100
||||||| | | |||||| | ||||| |||||||| ||||||| |||||||| ||
Sbjct 3089 CTGCTTC---AGTGGAACCCACACATGAGTCGGGTGGGAGTGGGAGGAGAATGGCAGTAC 3145
Query 3101 ATTCTAGAAGTGTATCAGAACCAGATTTCGGTAGGACGCCAATACAGGATCA-GACTGAC 3159
|| |||||||||||||||| |||||||||||||||||||| |||||||| | | |||||
Sbjct 3146 ATACTAGAAGTGTATCAGAGCCAGATTTCGGTAGGACGCCGATACAGGAA-ATGGCTGAC 3204
Query 3160 TCCTCAAAAGACAAAG-CTGCTGATGGGGTGACACAGGTGAAAGCAACTCG-T-AGTGTG 3216
||||| ||||| |||| | | ||||||||||||| || ||||| || || | | |||| |
Sbjct 3205 TCCTCGAAAGA-AAAGGCAGTTGATGGGGTGACAAAGTTGAAATCATCTGGGTCAGTG-G 3262
Query 3217 CCAAGTTCTCGGTTTAGCCGCTTTGGTATTGGAAT----A----C--TGAAG-A-GGGTC 3264
| | |||| |||||||| ||||||||| |||| || | | || || | |||||
Sbjct 3263 C-AGGTTCGCGGTTTAGTCGCTTTGGTTTTGGCATTTTTAAGGACACTGTAGGAAGGGTC 3321
Query 3265 TTACCATCTCGTTCATCTAAAGAGGCAAAACTGGGTG-ACGAGAATCAATTCTACTATGA 3323
||| | || || |||| |||||||||||| |||| | | || ||||| |||||||||||
Sbjct 3322 TTAGC-TCG-GT-CATCCAAAGAGGCAAAATTGGGCGCA-GAAAATCAGTTCTACTATGA 3377
Query 3324 CGATAATCTAAAGAGATGGGTGGAAAGAGGTGTGGAACCCCCAGCTGAGGAAGCTGCACT 3383
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3378 CGACAAACTAAAGAGATGGGTGGAAAGAGGTGTGGAACCCCCAGCTGAGGAAGCTGCACT 3437
Query 3384 ACCTCCTCCTCCAACGTTAGGCGCATTCCGAAGCAACTCATTGGGTTATGAAAACAAATC 3443
|||||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct 3438 GCCTCCTCCTCCAACAATAGGCGCATTCCAAAACAACTCATTGGGTTATGAAAACAAATC 3497
Query 3444 TGACATGAAGAACGAGATGTCTCCATCTAGTGGGAGCTGGAGTAGTGGCAGCCCAACTCC 3503
||| |||| | || | ||||| ||||| ||||||| ||| ||||||||||
Sbjct 3498 TGATATGA---------T-TC-C-ATCTAATGGGAACTGGAGTTCTGGTGGCCCAACTCC 3545
Query 3504 GTCAGAGAATTCTTCGGGAATCCCACCAGTATCACAGGGCTCAAACCAATTCTCAGCTCG 3563
||||||||||||||| |||||||||||| | ||||| || || || ||||||||||||||
Sbjct 3546 GTCAGAGAATTCTTCAGGAATCCCACCAATCTCACACGGTTCGAATCAATTCTCAGCTCG 3605
Query 3564 TGGACGTATGGGTGTGCGTGCAAGATACGTTGACACCTTTAATCA---AGGCCGTGGAAA 3620
||| |||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||
Sbjct 3606 TGGGCGTACGGGTGTGAGGGCAAGATACGTTGACACCTATAATCCTCCAGGCCGTGGAAA 3665
Query 3621 CTCCTCG-AGCATGTAT-CAGTCACCTCCCGTACAATCTGCTAAACCACCGATTCCTGCA 3678
||| || | |||| || | ||||||| |||||||| |||| |||||||| || || |||
Sbjct 3666 CTC-TCATACCATG-ATTCCGTCACCTTCCGTACAAACTGCAAAACCACCAATCCCCGCA 3723
Query 3679 AAAGCAAAATTCTTCGT-CCCAGCAGCACCGGCATCGTTTGCAAACGACCAGGTAATGGA 3737
|||||||| ||||| || ||| |||||||| ||||||||| |||||||||||| ||||||
Sbjct 3724 AAAGCAAAGTTCTTTGTTCCC-GCAGCACCTGCATCGTTTTCAAACGACCAGGCAATGGA 3782
Query 3738 ATCGGTTAG-TGATGAAACCAGACAGGAG-A-ACT-CAGCAGATGAAGAGGTAGTAGGGT 3793
| ||| | | || |||||||||||||||| | | | |||||||||||| |||||| |
Sbjct 3783 ACCGGCT-GCTGCTGAAACCAGACAGGAGGAGATTTCAGCAGATGAAG---TAGTAGCCT 3838
Query 3794 CTGCAGGCGCTCCAGGACCAA 3814
|| |||| |||||| |||||
Sbjct 3839 CTTCAGGGGCTCCACCACCAA 3859
Score = 176 bits (95), Expect = 2e-42
Identities = 186/229 (81%), Gaps = 10/229 (4%)
Strand=Plus/Plus
Query 3856 ATGCAGAGATTTCCAAGTCTAGACAACATCAAAAGAAGTGGATCAGGAATAAGCCTTAAT 3915
|||||||||| ||||||| | || |||||| |||||| ||||| || |||||| | |||
Sbjct 3865 ATGCAGAGATATCCAAGTATGGATAACATCCAAAGAAATGGATTGGGGATAAGCGTCAAT 3924
Query 3916 GGTGATCTTCCTC--CGT-C-AGGATCAAGAAGAACAGCTTCATGGAGCGGAAGCGTCAA 3971
|| ||| || || | | | | || |||||||||||||||||||| |||| | | ||
Sbjct 3925 GGGGATAATCATCAGCCTCCTA-CTTCCAGAAGAACAGCTTCATGGAGTGGAAACTTTAA 3983
Query 3972 CAGCTCGTCGTTTATGTCTCCAACGAGTGCATCAACATTCAAACCAAG-CCCACTGAACA 4030
|| | | ||||||| | |||| || ||| ||||||| |||||||| || || ||| ||||
Sbjct 3984 CA-C-C-TCGTTTACGCCTCCTACCAGTCCATCAACCTTCAAACC-AGTCCTACTCAACA 4039
Query 4031 GTAGCAGTAGCAGCTTAGGAGAGGAGCTTCAGGAAGTGGAACTGTAAGT 4079
||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 4040 GTAGCAGCAGCAGCTTAGGAGAGGAGCTTCAGGAAGTGGAACTCTAAGT 4088
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 218326535936
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5