BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494249
Length=1110
Score E
Sequences producing significant alignments: (Bits) Value
AT5G47330.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1661 0.0
AT5G47340.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1092 0.0
AT5G47350.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 902 0.0
> AT5G47330.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:19207099-19208822 FORWARD LENGTH=1127
Length=1127
Score = 1661 bits (899), Expect = 0.0
Identities = 1048/1117 (94%), Gaps = 22/1117 (2%)
Strand=Plus/Plus
Query 1 aaaaaagaaaaagaaaaaaCAC-ATAACCATAATCGCTAATCGCAACTTT-TGCGT-TTG 57
||||||||||||||||||| || |||| ||||| ||| |||||||||||| | || ||
Sbjct 12 AAAAAAGAAAAAGAAAAAA-ACTATAAACATAAACGCCAATCGCAACTTTCT-TGTCTT- 68
Query 58 TCAATGGGAAATAAAGGTTTGAAGCGGTCTTGTGTTGCGGTGGCGGTTGCATTATTAGCC 117
||||||||| | |||||||||||||||||| |||||||||||| |||||||||| |||||
Sbjct 69 TCAATGGGAGAGAAAGGTTTGAAGCGGTCTGGTGTTGCGGTGGTGGTTGCATTACTAGCC 128
Query 118 ATGGTTCATGTCTCTGTTTCAGTTCCGTTCATAATGCTTCATGGAATCTCAGCTCAATGT 177
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 129 ATGGTTCATGTCTCTGTTTCAGTTCCGTTCATAATGCTTCATGGGATCTCAGCTCAATGT 188
Query 178 TCTAATGCTAGAGATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGC 237
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 189 TCTAATGCTAGGGATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGC 248
Query 238 TTTTGCTTAGAAATTGGAAATGGAGTAGGCGATTCATGGTTAATGCCACTTACGCGGCAA 297
|||||||||||||||||||||||||| | |||||||||||||||||| ||||| || |||
Sbjct 249 TTTTGCTTAGAAATTGGAAATGGAGTTGCCGATTCATGGTTAATGCCGCTTACACGACAA 308
Query 298 GCGGAAATAGCGTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATT 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GCGGAAATAGCGTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATT 368
Query 358 GTTGGAAGATCTCAGGGGAACCTAGTGGCTCGAGGCTTAATTGAGTTCTGCGACGGTGGC 417
|||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct 369 GTTGGAAGATCTCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGTGACGGTGGC 428
Query 418 CCTCCGGTTTACAACTACATATCCTTGGCTGGTCCTCATGCTGGAATATCCTCTGTTCCT 477
||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct 429 CCTCCGGTTTACAACTATATATCCTTGGCCGGTCCTCATGCTGGCATCTCCTCTGTTCCT 488
Query 478 ATGTGTGGTTCTGGTTTATTCTGTAAGTTAGCAGATGAGCTAATCAAGGGAGATATCTAT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 ATGTGTGGTTCTGGTTTATTCTGTAAGTTAGCAGATGAGCTAATCAAGGGAGATATCTAT 548
Query 538 AGCGACTTCATTCAAGATCATCTTGCTCCTAGTGGTTATCTCAAAATTCCTACTGATATG 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 AGCGACTTCATTCAAGATCATCTTGCTCCTAGTGGTTATCTCAAAATTCCTACTGATATG 608
Query 598 AAAAAGTACTTGGAAAACTCTAAGTATCTACCTAAGCTTAACAATGAGATACCAAATCAA 657
| ||||||||||| || |||||||||| |||||||||||||||||||||||||| | |||
Sbjct 609 ACAAAGTACTTGGGAAGCTCTAAGTATTTACCTAAGCTTAACAATGAGATACCAGACCAA 668
Query 658 AGAAACTCAA-CTTACAAAGACCGTTTCACCAGTTTACATAACTTGGTTCTTATCAAGTT 716
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 AGAAAC-CAAACTTACAAAGACCGTTTCACCAGTTTACATAACTTGGTTCTTATCAAGTT 727
Query 717 TCAGGACGATAAGGTTATTGTTCCAAAAGATTCATCGTGGTTCGGGTTTTATCCGGATGG 776
||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 728 TCAGGGCGACAAGGTTATAGTTCCAAAAGATTCATCTTGGTTCGGGTTTTATCCGGATGG 787
Query 777 TGAATTTGAACATCTTCTCTCTGCTCAACAGACAAAGCTCTATACAGAGGATTGGATAGG 836
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 788 TGAATTCGAACCTCTTCTCTCTGCTCAACAGACAAAGCTCTATACAGAGGATTGGATCGG 847
Query 837 TCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTAGCCGGTGAACATAT 896
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 848 TCTGAAAACATTGGATGATGCGGGAAAAGTGAAGTTTGTGAGTGTAGCCGGTGAACATAT 907
Query 897 CAGAATGGCAGATGAAGATGTCGTCAAACATGTTGTACCTTATCTCCAGGACCAACCGTC 956
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 908 CAGAATGGTAGATGAAGATGTCGTCAAACACGTTGTACCTTATCTCCAGGACCAACCGTC 967
Query 957 TTCGGTGCAAAGACT-CAACCGCAAGACGAAGCAGCCCTTGAATCCTTAAAAAGAGCAAA 1015
|||||||||||| || ||||||||||||||||||||||||| || |||||||| ||||||
Sbjct 968 TTCGGTGCAAAG-CTTCAACCGCAAGACGAAGCAGCCCTTGCATGCTTAAAAATAGCAAA 1026
Query 1016 TACCTCAATAGTTATTTTACTTATTCATGCAATTTAT--CGAAAAAAGCTTAGTAATGAT 1073
|||| |||||||||| ||||||||||||||| ||| ||||||| ||||||| |||||
Sbjct 1027 TACCACAATAGTTAT---ACTTATTCATGCAATATATGTCGAAAAA-GCTTAGTGATGAT 1082
Query 1074 TTTGTAGAACTAGAATCATTATTCTTATATAAATATA 1110
||||||||| | | ||||||||||| |||||||
Sbjct 1083 TTTGTAGAA-TC----C-TTATTCTTATAGAAATATA 1113
> AT5G47340.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:19209507-19211134 FORWARD LENGTH=954
Length=954
Score = 1092 bits (591), Expect = 0.0
Identities = 838/955 (88%), Gaps = 26/955 (3%)
Strand=Plus/Plus
Query 70 AAAGGTTTGAAGCGGTCTTGTGTTGCGGTGGCGGTTGCATTATTAGCCATGGTTCATGTC 129
|||||||||||||| ||||||||| ||||| ||||||||| ||||||| |||| || ||
Sbjct 7 AAAGGTTTGAAGCGATCTTGTGTTATGGTGGTGGTTGCATTCTTAGCCAAGGTTGATATC 66
Query 130 TCTGTTTCAGTTCCGTTCATAATGCTTCATGGAATCTCAGCTCAATGTTCTAATGCTAGA 189
|| |||||||||||||||||||||||||| |||||| || ||||||||||| ||| || |
Sbjct 67 TCAGTTTCAGTTCCGTTCATAATGCTTCACGGAATCGCATCTCAATGTTCTGATGATACA 126
Query 190 GATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTTAGAA 249
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 AATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTTAGAA 186
Query 250 ATTGGAAATGGAGTAGGCGATTC-ATGGTTAATGCCACTTACGCGGCAAGCGGAAATAGC 308
||||||||||||||| |||| || ||| |||||||||| | ||||| ||||||||
Sbjct 187 ATTGGAAATGGAGTAATAAATTCAAT-GTTCTTGCCACTTACACAACAAGCAGAAATAGC 245
Query 309 GTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAGATC 368
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 ATGTGAGAATGTGAAGGAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGAAGATC 305
Query 369 TCAGGGGAACCTAGTGGCTCGAGGCTTAATTGAGTTCTGCGACGGTGGCCCTCCGGTTTA 428
||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||
Sbjct 306 TCAGGGGAACCTAGTGGCTCGAGGCTTGATCGAGTTCTGCGACGGTGGACCTCCTGTTTT 365
Query 429 CAACTACATATCCTTGGCTGGTCCTCATGCTGGAATATCCTCTGTTCCTATGTGTGGTTC 488
|||||| |||||||| ||||||||||||||||| || || ||| |||||| | || ||
Sbjct 366 CAACTATATATCCTTAGCTGGTCCTCATGCTGGCATTTCTTCTCTTCCTAGGGGTCTTTG 425
Query 489 TGGTTT-A-TTCTG-T--A--A-GTTAG-CA---GATGAGCTAATCAAGGGAGATATCTA 536
|||||| | || | | | | || || | ||||| | |||||||||| | ||||
Sbjct 426 TGGTTTAACGTCCGATCCAGCATGTAAGAAATTTAATGAGTTGATCAAGGGAGCTCTCTA 485
Query 537 TAGCGACTTCATTCAAGATCATCTTGCTCCTAGTGGTTATCT-CAAAATTCCTACTGATA 595
|||||| |||||||||||||||||||||||||||||| || |||||| |||| |||||
Sbjct 486 TAGCGAGACCATTCAAGATCATCTTGCTCCTAGTGGTTA-CTACAAAATCCCTAATGATA 544
Query 596 TGAAAAAGTACTTGGAAA-ACTCTAAGTATCTACCTAAGCTTAACAATGAGATACCAAAT 654
||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 545 TGAAACAGTACTTGGAAAGA-TCTAAGTATCTACCTAAGCTTAACAACGAGATACCAAAC 603
Query 655 CAAAGAAACTC-AACTTACAAAGACCGTTTCACCAGTTTACATAACTTGGTTCTTATCAA 713
||||||||| | |||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 604 CAAAGAAAC-CAAACTTACAAAGACCGTTTCACCAGTTTACACAACCTGGTTCTTGTCAA 662
Query 714 GTTTCAGGACGATAAGGTTATTGTTCCAAAAGATTCATCGTGGTTCGGGTTTTATCCGGA 773
||||||||||||| |||||||| |||||| |||||| | ||||| ||||||||||||||
Sbjct 663 GTTTCAGGACGATGAGGTTATTACTCCAAATGATTCAACTTGGTTTGGGTTTTATCCGGA 722
Query 774 TGGTGAATTTG-AACATCTTCTCTCTGCTCAA-CAGACAAAGCTCTATACAGAGGATTGG 831
|||||| || | ||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct 723 TGGTGAGTTCGAAAC-TCTTCTCTCTGCT-AACCAGACAAAGCTCTATACAGAGGATTGG 780
Query 832 ATAGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTAGCCGGTGAA 891
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 781 ATCGGTCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTACCCGGTGGA 840
Query 892 CATATCAGAATGGCAGATGAAGATGTCGTCAAACATGTTGTACCTTATCTCCAGGACCAA 951
||| ||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||
Sbjct 841 CATGTCAGAATGGCAGAAGAAGATGTCGTCAAATACGTTGTACCTTATCTCCAGAACCAA 900
Query 952 CCGTCTTCGGTGCAAAGACT-CAACCGCAAGACGAAGCAGCCCTTGAATCCTTAA 1005
| | || | | ||||| || |||||||||||| ||| |||||||| ||||||||
Sbjct 901 CAGCCTGCCGCACAAAG-CTTCAACCGCAAGACCAAGGAGCCCTTGCATCCTTAA 954
> AT5G47350.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:19212689-19214453 FORWARD LENGTH=1151
Length=1151
Score = 902 bits (488), Expect = 0.0
Identities = 871/1055 (83%), Gaps = 29/1055 (3%)
Strand=Plus/Plus
Query 70 AAAGGTTTGAAGCGGTCTTGTGTTGCGGTGGCGGTTGCATTATTAGCCATGGTTCATGTC 129
|||||||||| | |||||||||| ||||| ||||||||| ||||||||||||||||||
Sbjct 72 AAAGGTTTGACGATGTCTTGTGTTTTGGTGGTGGTTGCATTCTTAGCCATGGTTCATGTC 131
Query 130 TCTGTTTCAGTTCCGTTCATAATGCTTCATGGAATCTCAGCTCAATGTTCTAATGCTAGA 189
|||||||||||||||||| || || ||| || |||| | | ||||||||| ||||| |
Sbjct 132 TCTGTTTCAGTTCCGTTCGTAGTGTTTCCTGAAATCGGAACACAATGTTCTGATGCTCCA 191
Query 190 GATGCTAACTTCACACAGCTTCTCACTAACCTCTCTGGCTCTCCTGGCTTTTGCTTAGAA 249
|||||||||||||||||||||||| |||||||||| |||| |||||||||||| |||||
Sbjct 192 AATGCTAACTTCACACAGCTTCTCAGTAACCTCTCTAGCTCACCTGGCTTTTGCATAGAA 251
Query 250 ATT------GGAAATGGAGTAGGCGATTCATGGTTAATGCCACTTACGCGGCAAGCGGAA 303
||| |||||| | |||||| |||||||||||| |||||||| | |||||||||
Sbjct 252 ATTGGCGAGGGAAATCCAATAGGCGCTTCATGGTTAATACCACTTACACAACAAGCGGAA 311
Query 304 ATAGCGTGTGAGAAGGTGAAGCAAATGAAAGAGTTGAGTCAAGGATACAACATTGTTGGA 363
|||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||
Sbjct 312 GTAGCGTGTGATAAGGTGACGCAGATGGAAGAGTTGAGTCAAGGATACAACATTGTTGGA 371
Query 364 AGATCTCAGGGGAACCTAGTGGCTCGAGGCTTAATTGAGTTCTGCGACGGTGGCCCTCCG 423
||| ||||||||| | ||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 372 AGAGCTCAGGGGAGCTTAGTGGCTCGAGGCTTAATCGAGTTCTGCGAAGGTGGGCCTCCT 431
Query 424 GTTTACAACTACATATCCTTGGCTGGTCCTCATGCTGGAATATCCTCTGTTCCTATGTGT 483
||| ||||||| |||||||||||||||||||||||||| | || | ||| | ||||
Sbjct 432 GTTCACAACTATATATCCTTGGCTGGTCCTCATGCTGGCACCGCCGATCTTCTTCGGTGT 491
Query 484 GGT--T-CTGGTTTA-TTCTGTAAGTTAGCAGATGAGCTAATCAAGGGAGATATCTATAG 539
| | |||| ||| || ||| | ||||| ||| | || ||||| | || ||| ||
Sbjct 492 AATACTTCTGGCTTAATT-TGTGACATAGCAAATGGGATAGGCAAGGAAAATCCCTACAG 550
Query 540 CGACTTCATTCAAGATCATCTTGCTCCTAGTGGTTATCTCAAAATTCCTACTGATATGAA 599
|||||| |||||||| |||||||||||||||||||| |||||| |||| || |||
Sbjct 551 CGACTTTGTTCAAGATAATCTTGCTCCTAGTGGTTATTTCAAAAACCCTAAAAATGTGAC 610
Query 600 AAAGTACTTGGAAA-ACTCTAAGTATCTACCTAAGCTTAACAATGAGATACCAAATC-AA 657
| |||| || ||| ||| | ||||||||||||||||||||||||||| |||| | | ||
Sbjct 611 AGGGTACCTG-AAAGACTGTCAGTATCTACCTAAGCTTAACAATGAGAGACCATA-CGAA 668
Query 658 AGAAACTCAACTTACAAAGACCGTTTCACCAGTTTACATAACTTGGTTCTTATCAAGTTT 717
|||||| |||||||||||||||||||| | |||||||| ||| ||||| || || ||||
Sbjct 669 AGAAACACAACTTACAAAGACCGTTTCGCAAGTTTACAGAACCTGGTTTTTGTCCTGTTT 728
Query 718 CAGGACGATAAGGTTATTGTTCCAAAAGATTCATCGTGGTTCGGGTTTTATCCGGATGGT 777
|| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 729 GAGAACGATACGGTTATTGTTCCAAAAGAGTCATCTTGGTTCGGGTTTTATCCGGATGGT 788
Query 778 GAATTTGA-ACATCTTCTCTCTGCTCAACAGACAAAGCTCTATACAGAGGATTGGATAGG 836
|| || | |||| ||||| ||| |||| ||||||||||||||| ||| |||||||||||
Sbjct 789 GACTTA-ACACATGTTCTCCCTGTTCAAGAGACAAAGCTCTATATAGAAGATTGGATAGG 847
Query 837 TCTGAAAACATTGGATGATGCTGGAAAAGTGAAGTTTGTGAGTGTAGCCGGTGAACA-TA 895
||||||| |||||| || ||||||||||||| ||||||||| |||| ||||||| || |
Sbjct 848 TCTGAAAGCATTGGTTGTTGCTGGAAAAGTGCAGTTTGTGAATGTAACCGGTGACCACT- 906
Query 896 TCAGAATGGCAGATGAAGATGTCGTCAAACATGTTGTACCT-TATCTCCAGGACCAACCG 954
| | |||||| || |||||| |||||||| | || |||||| | ||||||||| |||| |
Sbjct 907 TAATAATGGCGGACGAAGATCTCGTCAAATACGTCGTACCTCT-TCTCCAGGATCAACAG 965
Query 955 TCTTCGGTGCAAAGACTCAACCGCAAGACGAAGCAGCCCTTGAATCCTTAAAAAGAGCAA 1014
||| | | |||||||||||||||||| ||| |||||||| |||||||||| ||||||
Sbjct 966 TCTGCCCCACCAAGACTCAACCGCAAGACCAAGGAGCCCTTGCATCCTTAAAATGAGCAA 1025
Query 1015 ATACCTCAATAGTTATTTTACTTATTCATGCAATTTATCGAAAAAAGCTTAGTAATGATT 1074
||| ||||| | ||| ||| |||||| |||| | |||| || ||| ||| ||||||
Sbjct 1026 ATAGTTCAATCGCTAT---ACTAATTCATCCAATGT--CGAATAA-GCTCAGTGATGATT 1079
Query 1075 TTGTAGA-ACTAGAATCATTATTCTTATATAAATA 1108
||| || || | |||| || ||||||||| ||||
Sbjct 1080 GTGT-GACACAATAATCCTTCTTCTTATATGAATA 1113
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54417390780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5