BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494323
Length=3765
Score E
Sequences producing significant alignments: (Bits) Value
AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192... 5651 0.0
AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-79... 180 1e-43
AT3G28345.1 | Symbols: | ABC transporter family protein | chr3... 87.9 6e-16
AT3G28415.1 | Symbols: | ABC transporter family protein | chr3... 82.4 3e-14
> AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192-18882347
REVERSE LENGTH=3747
Length=3747
Score = 5651 bits (3060), Expect = 0.0
Identities = 3543/3775 (94%), Gaps = 38/3775 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGAGAAAGCAAAGAAGAAGACAACTGGAGAAGGAGGAACTCAGAGAATAGCGTTT 60
|||||||||||||| |||||||||| || ||||| |||||||| ||||||||||||||||
Sbjct 1 ATGGCGGAGAAAGCGAAGAAGAAGAAAAATGGAGGAGGAGGAAATCAGAGAATAGCGTTT 60
Query 61 TACAAGCTTTTCACGTTTGCAGATCGATACGACATCGTTTTAATGGTCATCGGGACACTC 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 61 TACAAGCTTTTCACGTTTGCAGATCGGTACGACATCGTTTTAATGGTCATCGGGACCCTC 120
Query 121 TCCGCCATGGCCAACGGCTTAACTCAGCCGTTTATGGCAATACTCATGGGGCAGCTCATT 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 121 TCCGCCATGGCCAACGGCTTAACTCAGCCGTTTATGTCAATACTCATGGGGCAGCTCATT 180
Query 181 AACGTTTTCGGTTTCTCAGATCATGATCACGTGTTTAAAGAAGTCTTCAAGGTTGCTGTG 240
|||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 AACGTTTTTGGTTTCTCTGATCATGATCACGTGTTTAAAGAAGTCTCCAAGGTTGCTGTG 240
Query 241 AAGTTTCTTTATCTTGCGGCCTACGCTGGTGTTATGTCCTTCCTGCAGGTCTCATGCTGG 300
||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||
Sbjct 241 AAGTTTCTTTATCTTGCAGCCTACGCCGGTGTTGTGTCCTTCCTGCAGGTCTCATGCTGG 300
Query 301 ATGGTAACTGGGGAGCGTCAATCCACAAGAATCCGCCGGT-TATACCTAAAAACAATTTT 359
|||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||
Sbjct 301 ATGGTAACTGGGGAGCGTCAATCCACTAGAATCCGCC-GTCTATACCTAAAAACAATTTT 359
Query 360 AAGACAAGACATTGGATTTTTCGATACTGAGACAAATACCGGTGAAGTCATCGGAAGAAT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 AAGACAAGACATTGGATTTTTCGATACTGAGACAAATACCGGTGAAGTCATCGGAAGAAT 419
Query 420 GTCAGGAGACACCATTCTTATTCAAGATTCCATGGGAGAAAAGGTTGGGAAATTCACACA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GTCAGGAGACACCATTCTTATTCAAGATTCCATGGGAGAAAAGGTTGGGAAATTCACACA 479
Query 480 GCTCGTTTCATCATTCGTTGGTGGATTCACGGTTGCTTTTATAGTAGGCAGGAAACTCAC 539
||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct 480 GCTCGTTTCGTCATTCGTTGGTGGATTCACGGTTGCTTTTATAGTTGGAATGAAACTCAC 539
Query 540 ACTGGCTCTTCTTCCGTGCATTCCTCTGCTCGTGGGCACGGGTGGAGCAATGACCTATAT 599
| ||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct 540 ATTGGCTCTTCTTCCGTGCGTTCCTCTGATCGTGGGCACAGGTGGAGCAATGACCTATAT 599
Query 600 CATGTCAAAAAAGGCTCAACGTGTTCAACTGGCTTACACAGAAGCTGGAAACGTAGTACA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CATGTCAAAAAAGGCTCAACGTGTTCAACTGGCTTACACAGAAGCTGGAAACGTAGTACA 659
Query 660 ACAAGCCGTTGGGTCAATTAGAACAGTCGTGGCGTTCACTGGGGAGAAACAAGCAATGGA 719
||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct 660 ACAAGCCGTTGGGTCAATTAGAACAGTTGTGGCTTTCACTGGGGAGAAACAATCAATGGG 719
Query 720 AAAATATGAGAAGAAGCTTGAGATTGCTTACAGATCTATGGTTAAACAAGGGCTATACTC 779
|||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct 720 AAAATATGAGAAGAAGCTTGAGATAGCCTACAAATCTATGGTTAAACAAGGGCTATACTC 779
Query 780 TGGTCTAGGCATTGGGATAATGCTGGTTGTGGTATATTGTACCTATGGTTTTGCGATTTG 839
||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 780 CGGTCTAGGCATTGGGATAATGATGGTTGTGGTATATTGTACTTATGGTTTTGCGATTTG 839
Query 840 GTACGGTGCTCGGCTGATAATGGAGAAAGGATATACTGGAGGTCAAGTCATAAACGTGAT 899
|||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 840 GTACGGTGCTAGGCAGATAATAGAGAAAGGATATACTGGAGGTCAAGTCATGAACGTGAT 899
Query 900 TATGTCAATCTTGACTGGAGGAATGGCGTTGGGGCAGACATTGCCTTCTCTTAACTCTTT 959
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TACGTCAATCTTGACTGGAGGAATGGCGTTGGGGCAGACATTGCCTTCTCTTAACTCTTT 959
Query 960 TGCGGCCGGAACAGCTGCAGCTTACAAAATGTTTGAGACTATCAAAAGAAGACCGAAGAT 1019
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 960 TGCGGCCGGAACAGCTGCAGCTTACAAAATGTTTGAGACTATCAAAAGAAAACCAAAGAT 1019
Query 1020 CGATGCTTATGACATGAGTGGTAAGGTTTTGGAAGAAATTAAAGGCGACATCGAGCTAAG 1079
|||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||
Sbjct 1020 CGATGCTTATGACATGAGTGGTGAGGTTTTAGAAGAAATTAAAGGTGACATTGAGCTAAG 1079
Query 1080 AGATGTGTACTTTCGATATCCGGCTAGACCTGACGTGCAGATCTTTGCTGGATTTTCGTT 1139
||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1080 AGACGTGTACTTTCGATATCCGGCTAGACCTGACGTGCAGATATTTGTTGGATTTTCGTT 1139
Query 1140 GACTGTACCGAATGGCATGACCATGGCTTTGGTGGGACAGAGTGGTAGCGGAAAATCAAC 1199
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1140 GACTGTACCGAATGGCATGACCGTGGCTTTGGTGGGACAGAGCGGTAGCGGAAAATCAAC 1199
Query 1200 TGTGATCAGTTTAATTGAGAGGTTCTACGATCCGGAATCAGGAGAAGTTTTAATTGATGG 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1200 TGTGATCAGTTTAATTGAGAGGTTCTACGATCCGGAATCAGGAGAAGTTTTAATAGATGG 1259
Query 1260 GATTGACTTAAAGAAATTTCAAGTGAAATGGATCAGAAGTAAGATTGGTCTCGTAAGCCA 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 AATTGACTTAAAGAAATTTCAAGTGAAATGGATCAGAAGTAAGATTGGTCTCGTAAGCCA 1319
Query 1320 AGAACCTATACTTTTTGCGACCACAATTAGGGAGAACATTGTTTACGGCAAAAAAGATGC 1379
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 AGAACCTATACTATTTGCTACCACAATTAGGGAGAACATTGTTTACGGCAAAAAAGATGC 1379
Query 1380 GTCCGATCAAGAAATTAGGACCGCGCTTCAGCTCGCTAACGCTAGTAAATTCATCGACAA 1439
|||||| ||||||||||| ||||| ||| ||||||| ||||||||||| |||||||||||
Sbjct 1380 GTCCGACCAAGAAATTAGAACCGCACTTAAGCTCGCCAACGCTAGTAACTTCATCGACAA 1439
Query 1440 ACTTCCGCAGGGTTTGGAAACGATGGTAGGAGAGCATGGGACACAATTATCCGGTGGGCA 1499
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1440 ACTTCCGCAGGGTTTGGAAACGATGGTAGGAGAGCATGGGACGCAATTATCCGGTGGGCA 1499
Query 1500 AAAGCAAAGGATAGCGATTGCGAGGGCGATTTTGAAAAACCCAAAAATATTGCTTCTTGA 1559
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 AAAGCAGAGGATTGCGATTGCGAGGGCGATTTTGAAAAACCCAAAAATATTGCTTCTTGA 1559
Query 1560 TGAAGCTACAAGCGCTTTGGATGCAGAATCTGAACGCATTGTTCAAGATGCTCTTGTAAA 1619
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1560 TGAAGCTACAAGCGCTTTGGACGCAGAATCTGAACGCATTGTTCAAGATGCTCTTGTAAA 1619
Query 1620 GCTAATGCTGAGCAGAACCACTGTAGTGGTGGCTCACCGACTTACCACAATTAGAACCGC 1679
||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1620 GCTAATGTTGAGCAGGACCACTGTAGTGGTGGCTCACCGACTTACCACCATTAGAACCGC 1679
Query 1680 CGATATGATCGCTGTTGTGCAGCAGGGAAAAATCATTGAGAAAGGAACTCATGATGAGAT 1739
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1680 TGATATGATCGCTGTTGTGCAGCAGGGAAAAGTCATTGAGAAAGGAACTCATGATGAGAT 1739
Query 1740 GATTAAAGATCCCGAGGGAACATATTCACAGCTAGTTCGTCTACAGGAAGGATCTAAGAA 1799
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1740 GATTAAAGATCCCGAAGGAACATATTCACAGCTAGTTCGTCTACAAGAAGGATCTAAGAA 1799
Query 1800 AGAAGAAGCCGAACCAGA-AA--AGTGTGAAATGAGTTCCGAAATTGAAAGATCGGATAA 1856
|||||||| | || ||| || | |||| || | |||| || || | ||| ||
Sbjct 1800 AGAAGAAG-C-AA-TAGACAAGGAACCAGAAA--AG-TGTGAAA-TG--AGTTTGGA-AA 1849
Query 1857 CCAAAATGGGATCCATAGAAGGAACTCATCAAGTAGCCGCCATTCCTTG-ACTCTCACAT 1915
| ||| | | | | | | | || || | | ||||||| | ||||||||||
Sbjct 1850 TCGAAA---G-T---TCGGA-TAGC-CA--AAATGGAATCCATTCC-GGCACTCTCACAT 1897
Query 1916 CACCATTTGGTTTACCGGGAGTGATTAGCTTGAACCAGACGGAAGAGTTCCCCGAGAATA 1975
|||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1898 CACCATCTGGTTTACCGGGAGTGATTAGCTTGGACCAGACGGAAGAGTTCCACGAGAATA 1957
Query 1976 TCCCTTCCACCGAAAA-TCAAACGGCCAAGAAAAGCAAGAAATTATCATTAAGAAGGCTT 2034
| |||||||| |||| |||||||| |||||| ||||| || |||||||||||||||||
Sbjct 1958 TATCTTCCACC-AAAACTCAAACGGTTAAGAAAGGCAAGGAAGTATCATTAAGAAGGCTT 2016
Query 2035 GCTCACCTTAACAAACCAGAGATTTCGGTTTTGTTGGTCGGTTCATTGGCTGCAGTGATT 2094
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 2017 GCTCACCTTAACAAACCGGAGATTTCGGTTTTGTTGCTCGGTTCATTGGCTGCAGTGATT 2076
Query 2095 CACGGTATTGTGCTT-CCTGTCCAAGGTTTGCTTTTGTCTCACACAATCAGGATATTCTT 2153
|||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 2077 CACGGTATTGTG-TTCCCTGTTCAAGGTTTGCTTTTGTCTCGCACAATCAGGATATTCTT 2135
Query 2154 TGAGCCTTTC-AATCAACTAAAGAATGATTCTCATTTT-TGGGCTCTCATTTTCGTCTCC 2211
|||||| ||| ||| |||||||||||||||||| |||| |||||||||||||| ||| ||
Sbjct 2136 TGAGCC-TTCAAATAAACTAAAGAATGATTCTC-TTTTCTGGGCTCTCATTTTTGTCGCC 2193
Query 2212 CTTGGCTTAACAAACCTGATTGTGATTCCGTTTCAAAACTACTTCTTCGCTATCGCTGGA 2271
||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 2194 CTTGGCTTAACCGACCTGATTGTGATTCCGTTACAAAACTACTTATTCGCTATCGCTGGA 2253
Query 2272 GGAAAACTAATCAAACGTATCAGATCGTTGTCGTTTGATAAAGTTTTGCACCAAGATATA 2331
| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 2254 GCAAAACTAATCAAACGTATCAGATCGTTGTCGTTTGATAGAGTCTTGCACCAAGATATA 2313
Query 2332 AGTTGGTTCGACGATACTACGAATTCTAGCGGAGCGATTGGAGCGAGGTTGTCCACGGAT 2391
||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||
Sbjct 2314 AGTTGGTTCGACGATACTAAAAATTCTAGCGGTGTGATTGGAGCGAGGTTGTCCACGGAT 2373
Query 2392 GCTTCCACTGTGAAGAGTATCGTAGGAGATGCGTTAGGGTTGATCATGCAAAATATGGCA 2451
||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 2374 GCTTCTACAGTGAAGAGTATAGTAGGAGATGTGTTAGGGTTGATCATGCAAAATATGGCG 2433
Query 2452 ACTATAATTGCAGCATTTATTATAGCGTTCACGGCTAATTGGTTATTAGCTCTAATGGCC 2511
|||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 2434 ACTATAATTGGAGCATTTATTATAGCGTTTACGGCTAATTGGTTATTAGCTTTAATGGCC 2493
Query 2512 CTTCTGGTGGCACCAGTAATGTTCTTTCAAGCATACTACCAGATCAAGTTTATAACGGGT 2571
||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 2494 CTTTTGGTGGCACCAGTAATGTTTTTTCAAGGATACTACCAGATCAAGTTTATAACGGGT 2553
Query 2572 TTTGGCGCAAAAGCAAAAGGAAAGTATGAAGAGGCTAGCCAGGTTGCAAATGACGCGGTG 2631
||||| |||||||||| |||||| ||||||||||||||||||||||| | ||||||||||
Sbjct 2554 TTTGGAGCAAAAGCAAGAGGAAAATATGAAGAGGCTAGCCAGGTTGCGAGTGACGCGGTG 2613
Query 2632 AGCAGCATAAGAACAGTTGCATCATTCTGCGCAGAGGATAAAGTGATGGATTTATACCAA 2691
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2614 AGCAGCATAAGAACAGTTGCATCGTTCTGCGCAGAGGATAAAGTGATGGATTTATACCAA 2673
Query 2692 GAGAAATGTGATGTACCAAAGCAACAAGGTTTCAAATTAGGACTCGTAAGTGGTTTGTGC 2751
||||||||||| | ||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct 2674 GAGAAATGTGACGAACCAAAGCAACAAGGCTTCAAATTAGGACTGGTGAGTGGTTTGTGC 2733
Query 2752 TATGGTGGCTCATTCTTGGCTCTCTATTTAATCGAGTCCTTATGCTTTGTCGGCGGTTCC 2811
||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||||||||
Sbjct 2734 TATGGTGGCTCATACTTGGCTCTCTATGTCATCGAGTCCGTATGCTTTCTCGGCGGTTCC 2793
Query 2812 TGGTTGATTCAGACCAGGAGAGCAACGTTCGGAGAATTCTTTCAGGTTTTCTTTGCGTTA 2871
||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2794 TGGTTGATTCAGAACAGGAGGGCAACGTTCGGAGAATTCTTTCAGGTTTTCTTCGCGTTA 2853
Query 2872 ACTTTGACAGCCATAGGAGTGACTCAATCTAGTGCTATGGCACCTGACATAAACAAAGCA 2931
|||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 2854 ACTTTGACAGCCGTAGGAGTGACTCAAACTAGTACTATGGCACCTGACATAAACAAAGCA 2913
Query 2932 AAAGACTCTGCTGCTTCGATTTTTGATATTCTCGATACTAAATCGAAAATCGACTCGAGT 2991
|||||||||||||||||||| || ||||| ||||||| |||| |||||||||| ||||||
Sbjct 2914 AAAGACTCTGCTGCTTCGATATTCGATATCCTCGATAGTAAACCGAAAATCGATTCGAGT 2973
Query 2992 TCCGAGAAGGGGACAGTACTACCAATCGTCCACGGGGATATCGAGTTGCAACATGTCAGT 3051
|||||||| |||||| || |||||||||||||||| |||||||||||||||||||| |||
Sbjct 2974 TCCGAGAAAGGGACAATATTACCAATCGTCCACGGCGATATCGAGTTGCAACATGTTAGT 3033
Query 3052 TTCCGGTACCCTATGCGACCGGATATACAGATTTTTAGTGACTTGTGCTTAACTATCTCA 3111
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3034 TTCCGGTATCCTATGCGACCGGATATACAGATTTTTAGTGACTTGTGCTTAACTATCTCA 3093
Query 3112 TCTGGACAGACCGTTGCATTGGTTGGAGAGAGCGGGAGCGGTAAATCGACGGTCATAAGC 3171
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3094 TCTGGACAGACCGTTGCATTGGTTGGAGAAAGCGGGAGCGGTAAATCGACGGTGATAAGC 3153
Query 3172 TTACTAGAGAGATTCTATGATCCAGATTCAGGCAAGATTCTTTTAGATGAAGTTGAAATT 3231
||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||
Sbjct 3154 TTACTAGAGAGATTCTACGATCCGGATTCAGGCAAGATTCTTTTAGATCAAGTTGAAATT 3213
Query 3232 CAATCGTTAAAATTGAGTTGGTTAAGGGAACAAATGGGTTTGGTTAGTCAAGAACCGGTT 3291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3214 CAATCGTTAAAATTGAGTTGGTTAAGGGAACAAATGGGTTTGGTTAGTCAAGAACCGGTT 3273
Query 3292 TTGTTCAATGAGACAATAAGATCAAACATAGTATATGGCAAAACTAG-AGGAGCCACTGA 3350
||||||||||||||||| |||||||||||| |||||| |||| | | ||||||||| ||
Sbjct 3274 CTGTTCAATGAGACAATAGGATCAAACATAGCATATGGTAAAA-TCGGAGGAGCCACAGA 3332
Query 3351 GGAAGAGATTATAACCGCGGCAAAAGCGGCTAATGTGCATAACTTCATCAGCTCATTGCC 3410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3333 GGAAGAGATTATAACCGCGGCAAAAGCGGCTAATGTGCATAACTTCATCAGCTCATTGCC 3392
Query 3411 TCAAGGCTACGAAACGTCGGTTGGTGAACGCGGCGTACAATTATCTGGTGGTCAAAAACA 3470
|||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||
Sbjct 3393 TCAAGGCTACGAAACGTCCGTTGGTGAACGTGGAGTACAATTATCCGGTGGTCAAAAACA 3452
Query 3471 GAGGATCGCGATTGCTCGGGCTATTCTCAAGGATCCTAAAATTTTGTTGCTTGATGAAGC 3530
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3453 GAGGATCGCGATCGCTCGGGCTATTCTCAAGGATCCTAAAATTTTGTTGCTTGATGAAGC 3512
Query 3531 GACAAGCGCGTTGGATGCAGAGTCTGAGCGGGTAGTGCAAGATGCGCTTGATCGGGTGAT 3590
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 3513 GACAAGCGCGTTGGATGCAGAGTCTGAGCGGGTGGTGCAAGATGCGCTTGATCAGGTGAT 3572
Query 3591 GGTGAACCGGACCACGGTTGTGGTGGCTCACCGGCTCACTACGATTAAGGACGCGGATGT 3650
||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||| |
Sbjct 3573 GGTGAACAGGACCACGGTTGTGGTGGCTCACCTGCTCACTACCATTAAGGACGCTGATAT 3632
Query 3651 GATCGCGGTTGTGAAGAACGGTGTGATCGCAGAGAGTGGAAGACATGAGACGTTAATGGA 3710
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 3633 GATCGCGGTTGTGAAGAACGGTGTGATCGCGGAGAGTGGGAGACATGAAACGTTAATGGA 3692
Query 3711 GATTTCAGGTGGTGCTTATGCATCACTTGTAGCTTTTCACATGAGTGCGAACTGA 3765
|||||||||||||||||||||||| |||||||||||| | |||||||| ||||||
Sbjct 3693 GATTTCAGGTGGTGCTTATGCATCGCTTGTAGCTTTTAATATGAGTGCAAACTGA 3747
> AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790447
REVERSE LENGTH=3693
Length=3693
Score = 180 bits (97), Expect = 1e-43
Identities = 208/262 (79%), Gaps = 6/262 (2%)
Strand=Plus/Plus
Query 3446 TACAATTATCTGGTGGTCAAAAACAGAG-GATCGCGATTGCTCGGGCTATTC-TCAAGGA 3503
||||||| || || || || || ||| | | | |||||||| || || | || | || ||
Sbjct 3371 TACAATTGTCAGGAGGACAGAAGCAGCGCG-TGGCGATTGCACGCGCCA-TCGTGAAAGA 3428
Query 3504 TCCTAAAATTTTGTTGCTTGATGAAGCGACAAGCGCGTTGGATGCAGAGTCTGAGCGGGT 3563
|| || ||| |||| || || |||||||| ||||||||||| ||||| || ||||||||
Sbjct 3429 ACCGAAGATTCTGTTACTCGACGAAGCGACGAGCGCGTTGGACGCAGAATCGGAGCGGGT 3488
Query 3564 AGTGCAAGATGCGCTTGATCGGGTGATGGTGAACCGGACCACGGTTGTGGTGGCTCACCG 3623
|| ||||| |||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct 3489 GGTTCAAGACGCGCTTGATCGGGTGATGGTGAACCGGACCACCATCGTGGTGGCTCACAG 3548
Query 3624 GCTCACTACGATTAAGGACGCGGATGTGATCGCGGTTGTGAAGAACGGTGTGATCGCAGA 3683
||| | ||||| ||| | || || || ||||| || || |||||||||||||| |||||
Sbjct 3549 GCTTTCAACGATCAAGAATGCTGACGTCATCGCCGTCGTCAAGAACGGTGTGATTGCAGA 3608
Query 3684 GAGTGGAA-GACATGAGACGTT 3704
|| || | | || ||||||||
Sbjct 3609 GAAAGGGACG-CACGAGACGTT 3629
> AT3G28345.1 | Symbols: | ABC transporter family protein | chr3:10593753-10598775
REVERSE LENGTH=3891
Length=3891
Score = 87.9 bits (47), Expect = 6e-16
Identities = 174/234 (74%), Gaps = 14/234 (6%)
Strand=Plus/Plus
Query 3367 GCGGCAAAAGCGGCTAATG-TGCATAACTTCATCAGC-TCATTGCCTCAAGGCTACGAAA 3424
||||| ||||| || |||| | ||| | ||||||| | ||||| | |||| || || |
Sbjct 3322 GCGGCGAAAGCAGCGAATGCT-CATGATTTCATCA-CGTCATTAACGGAAGGGTATGACA 3379
Query 3425 CGT-CGGTTGGTGAAC-GCGGCGTACAATTATCTGGTGGTCAAAAACAGAGGATCGCGAT 3482
| | | | ||| | || | || ||||| || |||||||||||||||||||||||||||||
Sbjct 3380 CATACTG-TGGAG-ACAGAGGAGTACAGTTGTCTGGTGGTCAAAAACAGAGGATCGCGAT 3437
Query 3483 TGCTCGGGCTATTCTCAAGGATCC-TAAAATTTTG-TTGCTTGATGAAGCGACAAGCGCG 3540
||| | || || | || | || | | | ||| || || || ||||||||||||||
Sbjct 3438 AGCTAGAGCGGTTTTGAAAAACCCGTCAG-TGTTGCTT-CTAGACGAAGCGACAAGCGCT 3495
Query 3541 TTGGAT-GCAGAGTCTGAGCGGGTAGTGCAAGATGCGCTTGATCGGGTGATGGT 3593
||||| || |||| || || || ||||||||||| || || || || |||||
Sbjct 3496 TTGGACAGCC-AGTCGGAACGTGTGGTGCAAGATGCTCTCGAGCGTGTTATGGT 3548
> AT3G28415.1 | Symbols: | ABC transporter family protein | chr3:10647123-10651540
REVERSE LENGTH=3666
Length=3666
Score = 82.4 bits (44), Expect = 3e-14
Identities = 80/97 (82%), Gaps = 4/97 (4%)
Strand=Plus/Plus
Query 3445 GTACAATTATCTGGTGGTCAAAAACAGAGGATCGCGATTGCTCGGGCTATTCTCAAGGAT 3504
|||||| ||||||||||||||||||||||||||||||||||||| || || | ||| |
Sbjct 3343 GTACAACTATCTGGTGGTCAAAAACAGAGGATCGCGATTGCTCGTGCGGTTTTGAAGAAC 3402
Query 3505 CCTAAAATT-TTG-TTGCTTGATGAAGCGACAAGCGC 3539
|| | | | ||| || ||||||||||| || |||||
Sbjct 3403 CC-ATCAGTGTTGCTT-CTTGATGAAGCTACGAGCGC 3437
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 187524032934
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5