BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494350
Length=2262
Score E
Sequences producing significant alignments: (Bits) Value
AT5G46240.1 | Symbols: KAT1 | potassium channel in Arabidopsis ... 3517 0.0
AT4G18290.1 | Symbols: KAT2 | potassium channel in Arabidopsis ... 1513 0.0
> AT5G46240.1 | Symbols: KAT1 | potassium channel in Arabidopsis
thaliana 1 | chr5:18743566-18746730 REVERSE LENGTH=2289
Length=2289
Score = 3517 bits (1904), Expect = 0.0
Identities = 2132/2244 (95%), Gaps = 7/2244 (0%)
Strand=Plus/Plus
Query 1 ATAACAAATGGGTCACAACAAGTTGCTATAAAGGTCCCAACAGAAGAAGAAAAGAGAAGT 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ATAACAAATGGGTCACAACAAGTTGCCATAAAGGTCCCAACAGAAGAAGAAAAGAGAAGT 60
Query 61 TTGCCCGTGTCAATTTGTCACAAGCTTCATCACTATTTATAACTACCTTGCCAAGAAGAT 120
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTCCCCGTGTTGCTTTGTCACAAGCTTCATCACTATTTATAACTACCTTGCCAAGAAGAA 120
Query 121 AGCCTAAAAAGGTATAACAGTTTCTTTGTCTATAGCGATCATCAAAAAGATGTCGATCTC 180
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 121 AGCCTAAAAAGGTATAACAGTTTCTTTGTCTTTAGAGATCATCAAAAAGATGTCGATCTC 180
Query 181 TCGTACCCGAAATTTCTTCCAAAGATTCTGTGTCGAGGAATACAATATAGACACCATAAA 240
| | || |||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 181 TTGGACTCGAAATTTCTTCGAAAGATTCTGCGTCGAGGAATACAATATAGACACCATAAA 240
Query 241 ACAGAGTAGTTTCCTCTCTGCCGATCTTCTACCATCTCTTGGAGCCAGAATTAACCAATC 300
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 241 ACAGAGTAGTTTCCTCTCTGCCGATCTTCTACCATCTCTTGGAGCCAGGATCAACCAATC 300
Query 301 TACTAAGCTCCGTAAACATATAATCTCTCCTTTTAATCCACGTTATAGAGCATGGGAGAT 360
|||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct 301 TACTAAGCTCCGCAAACACATAATCTCTCCTTTTAATCCACGTTACAGAGCGTGGGAGAT 360
Query 361 GTGGCTAGTCTTTCTAGTTATTTACTCAGCTTGGATTTGCCCATTTCAATTTGCTTTCAT 420
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTGGCTAGTATTACTAGTTATTTACTCAGCTTGGATTTGCCCATTTCAATTTGCTTTCAT 420
Query 421 CACCTATAAAAAAGACGCGATTTTCATCATCGACAACATTGTTAATGGCTTCTTTGCCAT 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 421 CACCTATAAAAAAGACGCGATTTTCATCATCGACAACATTGTTAATGGCTTCTTCGCCAT 480
Query 481 AGATATTGTTCTCACCTTCTTTGTTGCGTATCTCGATAGCCACTCCTATCTTCTAGTTGA 540
|||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 481 TGATATTATTCTCACCTTCTTCGTCGCTTATCTCGATAGCCACTCCTATCTTCTAGTTGA 540
Query 541 CAATCCTAAGAAAATAGCAATAAGGTACCTTTCGACATGGTTCGCTTTCGATGTGTGTTC 600
|| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 541 CAGTCCTAAGAAAATAGCAATAAGGTACCTTTCGACGTGGTTCGCTTTCGATGTTTGTTC 600
Query 601 CACAGCACCATTTCAGCCACTGAGCCTCTTGTTTAACTACAACGGAAGCGAACTAGAATT 660
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 601 CACAGCACCATTTCAGCCACTAAGCCTCTTGTTTAACTACAACGGAAGCGAACTAGGATT 660
Query 661 CAGAATTCTTAGCATGCTCAGATTATGGCGTCTCCGTCGAGTTAGCTCGCTGTTTGCAAG 720
||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct 661 CAGAATTCTTAGCATGCTCAGGTTATGGCGTCTCCGGCGAGTTAGCTCGCTATTTGCAAG 720
Query 721 GCTTGAGAAAGATATTCGTTTCAACTACTTCTGGATACGGTGCACAAAACTCATTTCGGT 780
||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 721 GCTTGAGAAAGATATCCGTTTCAACTATTTCTGGATACGTTGCACAAAACTCATTTCGGT 780
Query 781 CACTTTGTTCGCTGTACATTGTGCTGGATGTTTCAACTACCTGATTGCAGATAGATATCC 840
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 CACTTTGTTCGCTATACATTGTGCTGGATGTTTCAACTACCTGATTGCAGATAGATATCC 840
Query 841 TAATCCAAGAAAGACATGGATCGGTGCCGTGTATCCAGATTTCAAAGAAGCAAGTCTCTG 900
||||||||||||||||||||| || || ||||||||| ||||||||||||||||||| ||
Sbjct 841 TAATCCAAGAAAGACATGGATTGGAGCTGTGTATCCAAATTTCAAAGAAGCAAGTCTATG 900
Query 901 GACTAGATATGTGACTGCTCTTTACTGGTCCATTACGACATTAACGACCACGGGATATGG 960
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GAATAGATATGTGACTGCTCTTTACTGGTCCATTACGACATTAACGACCACGGGATATGG 960
Query 961 AGATTTACATGCTGAGAATCCAAGAGAAATGCTTTTCGACATTTTCTTTATGCTATTCAA 1020
|||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| | |||||
Sbjct 961 AGATTTTCATGCTGAGAACCCAAGAGAAATGCTTTTTGACATTTTCTTCATGATGTTCAA 1020
Query 1021 CCTCGGTTTGACAGCTTACCTCATTGGAAATATGACCAACCTCGTCGTTCAGTGGACTAG 1080
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1021 CCTCGGTTTGACAGCTTACCTCATTGGAAATATGACCAACCTCGTCGTTCATTGGACTAG 1080
Query 1081 CCGAACCAGAACCTTTAGGGATACAGTGAGAGCTGCTTCAGAGTTTGCTTCAAGAAATCA 1140
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1081 CCGAACCAGAACCTTTAGGGATTCAGTGAGAGCTGCTTCAGAGTTTGCTTCAAGAAATCA 1140
Query 1141 ACTCCCACATGACATACAAGACCAAATGTTATCACACATTTGCTTAAAGTTCAAAACAGA 1200
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ACTCCCACATGACATACAAGATCAAATGTTATCACACATTTGCTTAAAGTTCAAAACAGA 1200
Query 1201 GGGCTTGAAACAACAAGAGACCTTGAACAATCTGCCAAAAGCAATCCGGTCAAGCATTGC 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 GGGCTTGAAACAACAAGAGACCTTGAACAATCTGCCAAAAGCAATCCGGTCAAGCATTGC 1260
Query 1261 AAACTACTTATTCTTCCCCATTGTTCACAACATTTACCTCTTTCAAGGAGTTTCTCGTAA 1320
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 AAACTATTTATTCTTCCCCATTGTTCACAACATTTACCTCTTTCAAGGAGTTTCTCGTAA 1320
Query 1321 CTTCCTATTTCAATTGGTTTCCGACATAGACGCCGAGTATTTCCCACCTAAAGAAGATAT 1380
|||||| |||||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct 1321 CTTCCTCTTTCAATTGGTTTCAGATATAGACGCTGAGTATTTCCCACCAAAAGAAGATAT 1380
Query 1381 AATTCTACAAAACGAAGCTCCTACTGATCTTTACATTCTGGTTTCAGGAGCAGTGGACTT 1440
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1381 AATTCTACAAAACGAAGCTCCTACTGATCTTTACATTCTGGTGTCAGGAGCAGTGGACTT 1440
Query 1441 CACATG-CTACGTTGATGGACATGATCAGATTCAAGGGAAAGCAGTTATTGGAGATACGT 1499
||| || |||||||||||||||||||||| |||||||||||||||| |||||||| || |
Sbjct 1441 CAC-TGTCTACGTTGATGGACATGATCAGTTTCAAGGGAAAGCAGTAATTGGAGAAACAT 1499
Query 1500 TTGGAGAGGTTGGAGTTTTATGCTATAGACCACAACCATTCACAGTAAGAACAGCCGAGC 1559
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1500 TTGGAGAGGTTGGAGTTTTATACTATAGACCACAACCATTCACAGTAAGAACAACCGAGC 1559
Query 1560 TATCTCAAATACTACGGATAAGCAGAACATCGCTGATGAGCGCAATGCACACTCATGCTG 1619
||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||
Sbjct 1560 TATCTCAAATACTGCGGATAAGCAGAACATCGCTGATGAGTGCGATGCATGCTCATGCTG 1619
Query 1620 ACGATGGACGAATTATAATGAACAATCTATTCATGAAACTTAGAGGGCAACAGTCAATAG 1679
||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1620 ACGATGGACGAGTCATCATGAACAATCTCTTCATGAAACTTAGAGGGCAACAGTCAATAG 1679
Query 1680 CAATAGATGATTCGAATA---GTGGTCAAGAAAACAGAGATTTTAAAAGCATGGTATGGG 1736
|||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||
Sbjct 1680 CAATAGATGATTCGAATACTAGTGGTCACGAAAACAGAGATTTCAAAAGCATGGGATGGG 1739
Query 1737 AAGAGTGGAGAGATTCAAGAAAAGATGGCTACGGTTTAGATGTGACGAATCCGACCTCCG 1796
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct 1740 AAGAGTGGAGAGATTCAAGAAAAGATGGCTATGGTTTAGATGTTACGAATCCGACTTCCG 1799
Query 1797 ATAATGCTCTAATGGATGCAATTCACAAGGGAGATACTGAATTGGTTAAGAAGATACTTA 1856
| | ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||
Sbjct 1800 ACACTGCTCTAATGGATGCGATTCACAAGGAAGATACTGAAATGGTTAAGAAGATACTTA 1859
Query 1857 AAGAACAAAAGTTAGAGAGAGCCAAAGAGGAAAGATCAAATAGTGAAACCGCTGGAAGAG 1916
| ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1860 AGGAACAAAAGATAGAGAGAGCCAAAGTGGAAAGATCAAGTAGTGAAACCGCTGGAAGAA 1919
Query 1917 GTTACGCAAACGATTCACCGAAAAAAGATCCATATTGCAGCTCAAGCAACCAAATCATCA 1976
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 GTTACGCTAACGATTCATCGAAAAAAGATCCATATTGCAGCTCAAGCAACCAAATCATCA 1979
Query 1977 AGCCATGTAAAAGAGAAGATAAGAGAGTTACCATCCACATGATGTCAGAGCGCAAGAACG 2036
||||||| ||| ||||||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct 1980 AGCCATGCAAACGAGAAGAAAAGAGAGTTACCATCCACATGATGTCTGAGAGCAAGAACG 2039
Query 2037 GGAAGTTGATACTCTTACCATCATCCATTA-AAGAGCTTCTAAGACTTGCAAGTGAAAAG 2095
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct 2040 GGAAGTTGATACTCTTACCATCATCCAT-AGAAGAGCTTCTAAGACTTGCAAGTGAGAAG 2098
Query 2096 TTTGGAGGCTGCAGCTTCACAAAGATAACCAATGCGGACAACGCCGAGATTGATGATTTA 2155
||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 2099 TTTGGAGGCTGCAACTTCACAAAGATCACCAATGCGGACAACGCTGAGATTGATGATTTA 2158
Query 2156 GATGTGATTTGGGATGGTGATCATTTGTATTTTTCATCAAATTGAGTTTGAAAACTCGAC 2215
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159 GATGTCATTTGGGATGGTGATCATTTGTATTTTTCATCAAATTGAGTTTGAAAACTCGAC 2218
Query 2216 TTCATTTATAGAGCATGAATATCT 2239
||||||||||||||||| ||||||
Sbjct 2219 TTCATTTATAGAGCATGTATATCT 2242
> AT4G18290.1 | Symbols: KAT2 | potassium channel in Arabidopsis
thaliana 2 | chr4:10115418-10118599 FORWARD LENGTH=2216
Length=2216
Score = 1513 bits (819), Expect = 0.0
Identities = 1308/1542 (85%), Gaps = 42/1542 (3%)
Strand=Plus/Plus
Query 170 ATGTCGATCTCTCGTACCCGAAATTTCTTCCAAA-GATTCTGTGTCGAGGAATACAATAT 228
||||| |||||| ||||| |||| ||||| |||| ||||||| ||||| |||||||||||
Sbjct 1 ATGTCAATCTCTTGTACCAGAAACTTCTT-CAAACGATTCTGCGTCGAAGAATACAATAT 59
Query 229 AGACACCA-TAAAACAGAGTAGTTTCCTCTCTGCCGATCTTC-TACCATCTCTTGGAGCC 286
|| | || | ||||| || |||||||||||||| |||| || ||||||||||||||||
Sbjct 60 GGATA-CATTCAAACATAGCAGTTTCCTCTCTGCTGATC-TCTTACCATCTCTTGGAGCT 117
Query 287 AGAATTAACCAATCTACTAAGCTCCGTAAACATATAATCTCTCCTTTTAATCCACGTTAT 346
||||| |||||||| ||||||||||||||||| || ||||||||||| ||||||||| |
Sbjct 118 AGAATAAACCAATCAACTAAGCTCCGTAAACACATCATCTCTCCTTTCGATCCACGTT-T 176
Query 347 -AGAGCATGGGAGATGTGGCTAGTCTTTCTAGTTATTTACTCAGCTTGGATTTGCCCATT 405
|| | ||||||||||||||| ||| |||| || |||||||||||||||||||| |||||
Sbjct 177 CAGGGGATGGGAGATGTGGCTGGTCATTCTTGTGATTTACTCAGCTTGGATTTGTCCATT 236
Query 406 TCAATTTGCTTTCATCACCTATAAAAAAGACGCGA-TTTTCATCATCGACAACATTGTTA 464
| | ||||| ||||||||||| || |||||||| | |||||||||| ||||||||||| |
Sbjct 237 TGAGTTTGCCTTCATCACCTACAAGAAAGACGC-ACTTTTCATCATTGACAACATTGTCA 295
Query 465 ATGGCTTCTTTGCCATAGATATTGTTCTCACCTTCTTTGTTGCGTATCTCGATAGCCACT 524
|||| ||||||||||| || || ||||||||||||| ||||| ||||| || |||||||
Sbjct 296 ATGGATTCTTTGCCATTGACATCATTCTCACCTTCTTCGTTGCTTATCTAGACAGCCACT 355
Query 525 CCTATCTTCTAGTTGACAATCCTAAGAAAATAGCAATAAGGTACCTTTCGACATGGTTCG 584
| ||||||||||| ||||| |||||||||||||| |||||||||||||| || |||||||
Sbjct 356 CATATCTTCTAGTCGACAAACCTAAGAAAATAGCTATAAGGTACCTTTCTACTTGGTTCG 415
Query 585 -CTTTCGATGTGTGTTCCACAGCACCATTTCAGCCACTGAG-CCTCTTGTTTAACTACAA 642
|||| ||||| || || ||||| ||||| ||| ||||||| | || |||| || |||||
Sbjct 416 CCTTT-GATGTCTGCTCAACAGCTCCATTCCAGTCACTGAGTCTTC-TGTTCAAATACAA 473
Query 643 CGGAAGCGAACTAGAATTCAGAATTCTTAGCATGCTCAGATTATGGCGTCTCCGTCGAGT 702
||||| ||| ||| ||||||| ||||||| |||||||| | |||||||| | |||||
Sbjct 474 TGGAAGTGAAATAGGATTCAGAGTTCTTAGTATGCTCAGGCTCTGGCGTCTTAGACGAGT 533
Query 703 TAGCTCGCTGTTTGCAAGGCTTGAGAAAGATATTCGTTTCAACTACTTCTGGATACGGTG 762
||||||||||||||||||||||||||||||||| || |||||||| ||||||| ||| ||
Sbjct 534 TAGCTCGCTGTTTGCAAGGCTTGAGAAAGATATCCGCTTCAACTATTTCTGGACACGATG 593
Query 763 CACAAAACTCATTTCGGTCACTTTGTTCGCTGTACATTGTGCTGGATGTTTCAACTACCT 822
|||||||||||||||||| || |||| || ||||||||||||||||| ||| ||||||
Sbjct 594 CACAAAACTCATTTCGGTGACACTGTTTGCAGTACATTGTGCTGGATGCTTCGCCTACCT 653
Query 823 GATTGCAGAT-AGATATCCTAATCCAAGAAAGACATGGATCGGTGCCGTGTATCCAGATT 881
||||||||| | ||||| | |||||| ||| |||||||| || || || || ||| |||
Sbjct 654 CATTGCAGATCA-ATATCATGATCCAACAAAAACATGGATTGGAGCTGTCTACCCAAATT 712
Query 882 TCAAAGAAG-CAAGTC-TCTGGACTAGATATGTGACTGCTCTTTACTGGTCCATTACGAC 939
|| ||| || |||| | | |||| ||||||||| ||||||||||||||||| ||||||||
Sbjct 713 TC-AAGGAGACAAG-CGTATGGAGTAGATATGTTACTGCTCTTTACTGGTCTATTACGAC 770
Query 940 ATTAACGACCACGGGATATGGAGATTTACATGCTGAGAATCCAAGAGAAATGCTT-TTCG 998
|||||| || || || |||||||| |||||||||||||| |||||||||||| || |||
Sbjct 771 ATTAACAACAACAGGTTATGGAGACTTACATGCTGAGAACCCAAGAGAAATG-TTGTTCT 829
Query 999 ACAT-TTTCTTTATGCTATTCAACCTCGGTTTGACAGCTTACCTCATTGGAAATATGACC 1057
| ||| || ||||| |||||||||||||| ||| |||||||||| ||||||||||||
Sbjct 830 TTGTGTTT-TTCATGCTCTTCAACCTCGGTTTCACATCTTACCTCATAGGAAATATGACC 888
Query 1058 AACCTCGTCGTTCAGTGGACTAGCCGAACCAGAACCTTTAGGGATACAGTGAGAGCTGCT 1117
||||| || ||||| ||||||||||| ||||||| |||||| ||||| || |||||||||
Sbjct 889 AACCTTGTGGTTCACTGGACTAGCCGCACCAGAAACTTTAGAGATACTGTAAGAGCTGCT 948
Query 1118 TCAGAGTTTGCTTCAAGAAATCAACTCCCA-CATGACATACAAGACCAAATGTTATCACA 1176
||||||||||| |||||||| ||||||||| || |||||||||||||||||||||||||
Sbjct 949 TCAGAGTTTGCATCAAGAAACCAACTCCCACCA-AACATACAAGACCAAATGTTATCACA 1007
Query 1177 CATTTGCTTAAAGTTCAAAACAGAGGG-CTTGAAACAACAAGAGACCTTGAACAA--TCT 1233
||||||||||||||| ||||||||||| || |||||||||||| | ||| || | | |
Sbjct 1008 CATTTGCTTAAAGTTTAAAACAGAGGGTCT-GAAACAACAAGA-AGCTTTAA-ATGGTTT 1064
Query 1234 GCCAAAAGCAATCCGGTCAAGCATTGCAAACTA-CTTATTCTTCCCCATTGTTCACAACA 1292
||| ||||||||||||||||||||||||||||| || |||||||| || ||||| |||
Sbjct 1065 GCCGAAAGCAATCCGGTCAAGCATTGCAAACTATCTC-TTCTTCCCAATCGTTCAGAACG 1123
Query 1293 TTTACCTCTTTCAAGGAGTTTCTCGTAACTTCCTATTTCAATTGGTTTCCGACATAGACG 1352
| ||||| ||||| ||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct 1124 TCTACCTATTTCACGGAGTTTCTCGCAACTTCCTATTTCAGTTGGTTTCAGATATAGACG 1183
Query 1353 CCGAGTATTTCCCACCTAA-AGAAGATATAATTCTACAAAACGAAGCTCCTACTGATCTT 1411
|||| ||||||||||| || ||||||| |||| ||||| ||||||||||||||||| ||
Sbjct 1184 CCGAATATTTCCCACC-AAGAGAAGATGTAATACTACAGAACGAAGCTCCTACTGACCTC 1242
Query 1412 TACATTCTGGTTTCAGGAGCAGTGGACTTCACATG-CTACGTTGATGGACATGATCAGAT 1470
||||| || || ||||| |||||||| || || || |||||||| | | | |||||| |
Sbjct 1243 TACATCCTAGTCTCAGGGGCAGTGGATTTTAC-TGTCTACGTTGGCGAAGAAGATCAGGT 1301
Query 1471 TCAAGGGAAAGCAGTTATTGGAGATACGTTTGGAGAGGTTGGAGTTTTATGCTATAGACC 1530
|||||| || || ||| |||| ||| | ||||||||| |||| || |||||||||| |||
Sbjct 1302 TCAAGGCAAGGCGGTTGTTGGCGATGCATTTGGAGAGATTGGTGTGTTATGCTATACACC 1361
Query 1531 ACAACCATTCACAGTAAGAACAGCCGAGCTATCTCAAATACTACGGATAAGCAGAACATC 1590
|||||| |||||||| || ||| | || |||||||| |||||||||||||||| || |||
Sbjct 1362 ACAACCTTTCACAGTTAGGACAACAGAACTATCTCAGATACTACGGATAAGCAAAAAATC 1421
Query 1591 GCTGATGAGCGCAATGC-ACACTCATG-CTGACGATGGACGAATTATAATGAACAATCTA 1648
|| ||||| || |||| | |||||| | || ||||||||| | ||||||||||| ||
Sbjct 1422 TCTAATGAGTGCTATGCGAG-CTCATGTC-GAAGATGGACGAGTCATAATGAACAACCTC 1479
Query 1649 TTCATGAAACTTAGAGGGCAACAGTCAATAGCAATAGATGAT 1690
||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1480 TTCATGAAACTTAGAGGGCAACAATCAATAGCAATTGATGAT 1521
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112248418620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5