BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494370 Length=1228 Score E Sequences producing significant alignments: (Bits) Value AT5G46080.1 | Symbols: | Protein kinase superfamily protein | ... 1757 0.0 > AT5G46080.1 | Symbols: | Protein kinase superfamily protein | chr5:18689542-18690857 REVERSE LENGTH=1316 Length=1316 Score = 1757 bits (951), Expect = 0.0 Identities = 1164/1261 (92%), Gaps = 38/1261 (3%) Strand=Plus/Plus Query 1 ATTGACCATCTAGACG-AAattt-tttccttcatttgtcttttttgacctttattttatt 58 |||||||||||||||| |||||| ||||| | ||||||||||||||||||||||||||| Sbjct 1 ATTGACCATCTAGACGAAAATTTCTTTCC-T--TTTGTCTTTTTTGACCTTTATTTTATT 57 Query 59 ttattattctcttcg----t--ata-t-----------at-at--ataatcatacattta 97 ||||||||||||||| | ||| | || || ||||||||||||||| Sbjct 58 TTATTATTCTCTTCGTATATAAATATTACACAACACCCATAATCCATAATCATACATTTA 117 Query 98 --tt-tttattG-AATAAAATGGACAAATCTGAAAAAATCGCATACGCTTCAGTTTTGtc 153 || ||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 118 TTTTCTTTGTTGAAATCAAATGGACAAATCTGAAAAAATCGCTTACGCTTCAGTTTTGTC 177 Query 154 tcttctttctctttctcttcttcttctcataatctttctcttcttATTATGCAGaaaaaa 213 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 178 TCTTCTCTCTCTTTCTCTTCTTCTTCTCATAATCTTCCTCTTCTTATTATGCAGAAAAAA 237 Query 214 aCCAAACCGGTCCGACGACGAATCTCTTCTTCCAGAAACCAAACCGGCCGGTCTTGCTTA 273 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 238 ACCAAACCGGTCCGACGACGAATATCTTCTTCCAGAAACCAAACCGGCTGGTCTTTCTTA 297 Query 274 TCCGTTAACCGACTTAGATTCAGCAACCGACGGATTCAACCAGCGACGAATCATTGGTTC 333 | |||||||||| ||||| ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 298 TTCGTTAACCGAATTAGACTCAGCAACCGACGGATTTAACCAACGACGAATCATCGGTTC 357 Query 334 TGGTCGGTTAGGCACGGTTTACGCTGCTATTATTCCAGATCATAAAAACCTCGTCGCAGT 393 |||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| || Sbjct 358 TGGTCGGTTAGGAACGGTTTACGCTGCGATTATTCCAGATCATAAAAATCTCGTCGCGGT 417 Query 394 CAAAAGAATACACCCCGGTTTGGTTTTGAGTAAACCGGGTTTCGGTTTTTCCACGGTTAT 453 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 TAAAAGAATACATCCCGGTTTGGTTTTGAGTAAACCGGGTTTCGGTTTTTCCACGGTTAT 477 Query 454 TAAATCGCTTTCTTCTTCTCATCATCCAAACGTCGTTTCAATCTTAGGATTCTCAGAAGC 513 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 478 TAAATCGCTTTCTTCTTCTCATCATCCAAACGTCGTTTCGATTTTAGGATTCTCAGAAGC 537 Query 514 TCCCGGAGAAAGAATCGTAGTTACAGAATTCGTCGGAGAAGGAAAAAGCTTGAGTGATCA 573 |||||||||||||||||| || |||||||||||||||||||| || |||||||||||||| Sbjct 538 TCCCGGAGAAAGAATCGTCGTAACAGAATTCGTCGGAGAAGGTAAGAGCTTGAGTGATCA 597 Query 574 CTTACAC-GAAG----AA-TCAGCGGTTGCGGTTGAATTTGGTTGGAAAACGCGTTTTAA 627 ||||||| || | || |||||| ||||||||||||||| ||||||||||||||||| Sbjct 598 CTTACACGGAGGTTCCAATTCAGCGACTGCGGTTGAATTTGGATGGAAAACGCGTTTTAA 657 Query 628 AATCGCGGCGGGAGCAGCGAGAGGATTGGAGTATCTACACGAAATCGCAAACCCTAGAAT 687 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 658 AATCGCGGCGGGAGCAGCGAGAGGATTGGAGTATTTACACGAAATCGCAAACCCTAGAAT 717 Query 688 CGTCCACGGTCGATTTACGTCATCGAATATATTGATAGACGACAAATCAACGGCTAAGAT 747 ||| |||||| |||| || ||||||||| | ||| ||||||| ||||||||||||||||| Sbjct 718 CGTTCACGGTAGATTCACATCATCGAATGTTTTGGTAGACGAGAAATCAACGGCTAAGAT 777 Query 748 TTGCGATTACGGATTTGGGTTTTTGATTCCGATTGAAAAATCTGGGATTTTTGGGTATGT 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 778 TTGCGATTACGGATTTGGGTTTTTGATTCCGATTGAAAAATCTGGGATTTTTGGGTATAT 837 Query 808 AGAAGAAGGTTATTGCAAAGAGAGTGATGTGTATGGATACGGCGTCGTTTTAATGGAGAT 867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 AGAAGAAGGTTATTGCAAAGAGAGTGATGTGTATGGATACGGCGTCGTTTTAATGGAGAT 897 Query 868 TTTGAGTGGAAGAAGAAGTGAAAATGGATTGATTGTGAAATGGGCAACACCATTGATTAA 927 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 898 TTTGAGTGGAAGAAGAAGTGAAAATGGATTGATTGTGAAATGGGCAACTCCATTGATTAA 957 Query 928 AGAACAGAGATTTGGTGAGTTTTTAGATTCGAGGATTGTTGTTCAAAGTGAGATTAAGAG 987 |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct 958 AGAACAGAGATTTGCTGAGCTTTTAGATCCGAGGATTGTTGTTCAAAGTGAGATCAAGAG 1017 Query 988 TTTGGTAATAAGATTAGCGAAGGTTGCTTTAGCATGTGTCGGGAATTCACGGAGGAGTCG 1047 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1018 TTTGGTAATAAGATTAGCGAAGGTTGCTTTAGCTTGTGTCGGGAATTCACGGAGGAGTCG 1077 Query 1048 GCCGTCGATTTCTGAAGTGGCGGCGATTTTGAATAGTTTGGAGATGGAAGGAGGGTGATT 1107 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1078 ACCGTCGATTTCTGAAGTGGCGGCGATTTTGAATAGTTTGGAGAGGGAAGGAGGGTGATT 1137 Query 1108 TGGATAATTTTAAAAGTTTTGGGGTTTTAGAGATAAAAATTTGGAATT-AAGGGATATAG 1166 ||||||||||||||| |||||||||||||| ||||||| || |||||| ||||| ||||| Sbjct 1138 TGGATAATTTTAAAACTTTTGGGGTTTTAGGGATAAAAGTT-GGAATTGAAGGGGTATAG 1196 Query 1167 TTGTTATTAGTTGAACAGCAACGTAAATGTTGTTTTAATGCCGTGTATATTATATAGTTT 1226 ||||||||| ||| || |||||||||||||| ||||||||||||||||||||| |||| Sbjct 1197 GTGTTATTAGGGGAAGAGAAACGTAAATGTTGTATTAATGCCGTGTATATTATATGGTTT 1256 Query 1227 T 1227 | Sbjct 1257 T 1257 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60341055090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5