BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494372 Length=1071 Score E Sequences producing significant alignments: (Bits) Value AT5G46060.1 | Symbols: | Protein of unknown function, DUF599 |... 1533 0.0 > AT5G46060.1 | Symbols: | Protein of unknown function, DUF599 | chr5:18681326-18682630 FORWARD LENGTH=1125 Length=1125 Score = 1533 bits (830), Expect = 0.0 Identities = 951/1008 (94%), Gaps = 13/1008 (1%) Strand=Plus/Plus Query 1 GACTCATATTAAATGAAGCAAAGTGGA-TATTCCATACGTCCAAGATTCCTCTAAAAATT 59 |||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| || Sbjct 1 GACTCAGATTAAATGAAGCAAAGTGGATTATTCTATACGTCTAAGATTCCTCTAAATCTT 60 Query 60 TATATCCATCTCAGTTCCTTACTCTTTATTTTATACGC--AAAATTAGAAACGTATCCAT 117 |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| Sbjct 61 TATATCCATCTCAGTTCCTTACTCTTTATTTTATACGCAAAAAAATAAAAACGTATCCAT 120 Query 118 ATATATAAACATTTATGTGTGTGTAAGAATATATATAATAAATCAAGACAGACATTGTAG 177 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 121 ATATAT-AACATTTATGTGTGTGTAAGAATATATATTATAAATCAAGACAGACATTTTAG 179 Query 178 CACAGAAGTAGAGAAAGAAAGGAAGCTGGAAGATGGAGATATTTGTGAAGAAAGAGTACT 237 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 180 CACAGAAGTAGAGAAACAAAGGAA----GAAGATGGAGATATTTGTGAAGAAAGAGTACT 235 Query 238 TAGATTTGGTTCTTGTCCCATTTGGATTAATCATAGTTTTATCTTACCATCTATTTCTTC 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 TAGATTTGGTTCTTGTCCCATTTGGATTAATCATAGTTTTATCTTACCATCTATTTCTTC 295 Query 298 TCTATAGAATCCTCTATTTTCCTTACCACACCATTATCGGTTTCATGAACATCGATAAAT 357 ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 296 TCTATAGAATCCTTTACTTTCCTTACCATACCATTATCGGTTTCATGAACATCGATAAAT 355 Query 358 CCATTTGGGTCGACCGTATCATGCAGGCAAGAAAAGACGAATTGGGTGGTGCTTTAACTG 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 CCATTTGGGTCGACCGTATCATGCAGGCAAGAAAAGACGAATTGGGTGGTGCTTTAACTG 415 Query 418 TTCTTTCAAGCAGCATATCAGCTTCAACATTTATGGCGTCTATTGCTTTAACATTGAGTT 477 ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 416 TTCTTTCGAGCAGCATATCAGCTTCAACATTTATGGCATCCATTGCTTTAACATTGAGTT 475 Query 478 CACTTATCGGCGCGTGGATCGGAAGCTCCCCGGTTAATATGACAGTTTTTACGGGAGATT 537 |||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||| ||| Sbjct 476 CACTTATCGGCGCGTGGATCGGAAGCTCGCCGGTTAGTATGACTGTTTTTACCGGACATT 535 Query 538 TTGTCTATGGAGACACAAGTTCAATCACAATGGTCATCAAATACACTTCTCTCCTCATAT 597 || ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| Sbjct 536 TTATCTATGGAGACACGAGTTCAATCACAATGGTCATCAAATACACATCGCTCCTCATAT 595 Query 598 GTTTCCTAGTTGCATTCTGTTGCTTTATTCAATCCACGAGATGTTTTCTACATGCGAATT 657 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | Sbjct 596 GTTTCCTAGTTGCATTCTGCTGTTTTATTCAATCCACGAGATGTTTTCTACATGCGAACT 655 Query 658 ATCTTATTACCACTCCCGGG-GAAGATATTCCGCCAGACATGGTGAAGAGATTTGTCTTG 716 ||||||| |||||||| ||| ||||||||||| || |||||||||||||||||||||||| Sbjct 656 ATCTTATCACCACTCC-GGGCGAAGATATTCCCCCGGACATGGTGAAGAGATTTGTCTTG 714 Query 717 AGAGGCGGTAACTATTGGTCGGTGGGTCTTAGGGCTCTTTACTTGGCTCTTGATCTACTG 776 |||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||| || Sbjct 715 AGAGGCGGGAACTATTGGTCGCTAGGTCTTAGGGCTCTTTATTTGGCTCTTGATCTATTG 774 Query 777 TTGTGGCTTTTCGGACCGGTTCCGATGTTTATTAACTCGGTTTTGATGGTTATTTGTTTG 836 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 775 TTGTGGCTTTTCGGACCGGTTCCGATGTTTATTAACTCGGTTTTGATGGTCATTTGTTTG 834 Query 837 TATTATCTCGACTCGAACTCGGTGGCTCAGCCTCTTTATCACCGGACTTTCGAGGCGGAG 896 |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 835 TATTTTCTCGACTCAAACTCGGTGGCTCAGCCTCTTTATCACCGGACTTTTGAGGCGGAG 894 Query 897 CAAGTTGTCAAGAAGATGAGAGGAGTTTTGCCTGAACAGTTGACTTTTAGATGTAATTGA 956 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 CAAATTGTCAAGAAGATGAGAGGAGTTTTGCCTGAACAGTTGACTTTTAGATGTAATTGA 954 Query 957 AAAGAAAATTATTTGATTATTATTAATCAATTTGCCAACTTGAGATTT 1004 |||||||||||||||||| ||| | ||| |||||||||||| ||||| Sbjct 955 AAAGAAAATTATTTGATTCTTA--A-TCACTTTGCCAACTTGGGATTT 999 Score = 119 bits (64), Expect = 6e-26 Identities = 68/70 (97%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 1002 TTTATCAATTATTGCATGAGATTTGAGAAAGCCGTACGGAGCATGTTCCGGGAGCGTCTT 1061 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1056 TTTATCAATTATTGCATGAGATTTGTGAAAGCCGTACGGAGCATGTTCCGGGAGCGTCTC 1115 Query 1062 GTCTTATGTT 1071 |||||||||| Sbjct 1116 GTCTTATGTT 1125 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52459569525 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5