BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494378 Length=1092 Score E Sequences producing significant alignments: (Bits) Value AT5G46000.1 | Symbols: | Mannose-binding lectin superfamily pr... 1384 0.0 > AT5G46000.1 | Symbols: | Mannose-binding lectin superfamily protein | chr5:18654319-18656376 REVERSE LENGTH=1191 Length=1191 Score = 1384 bits (749), Expect = 0.0 Identities = 884/946 (93%), Gaps = 22/946 (2%) Strand=Plus/Plus Query 1 ATGTCAGAGAAAGTG---ATAGCTTACGGTGGTTCCAATGGACAA-AATTTTGATGATGG 56 |||||| |||||||| |||||||||||||||||||||||| || || ||||||||||| Sbjct 1 ATGTCAAAGAAAGTGACCATAGCTTACGGTGGTTCCAATGGA-AACAAATTTGATGATGG 59 Query 57 TGTTTACGAGGGTACTTACGACGGTGTGCGTAAATTGATAGTTGGAGAAGACTCTCATGG 116 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 60 TGTTTACGAGGGTACTTACGACGGTGTGCGTAAATTGATAGTTGGAGAAGACTTTCATGG 119 Query 117 CATCGTTTACCTCAAGATCCAGTACGTGAAAAACGGAGATGTAG-TGCTTAAAGAACACG 175 |||||||||||||||||||||||||||||||||||| ||||| | || |||||||||||| Sbjct 120 CATCGTTTACCTCAAGATCCAGTACGTGAAAAACGGTGATGTCGTTG-TTAAAGAACACG 178 Query 176 GAAGAGCAAGAGGAACACATATTACAGAGACCGAGTTTGAAGTGAAGTGCCCAGACGAAT 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 GAAGAGCAAGAGGAACACATATTACAGAGACCGAGTTTGAAGTGAAGTGCCCAGACGAAT 238 Query 236 ACATTACGTCTATTTGGGGAACATACAGAAACGATGATCACAGATACAAATCTACCGGCG 295 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 239 ACATTACGTCTATTTGGGGAACATGCAGAAACGATCATCACAGATACAAATCTACCGGCG 298 Query 296 GGAGTACATCTGGACAGCTCACTCCTGCAGAAAAATACGACCTATATCTTGCTGCAAACA 355 |||| |||| || |||||||||| ||||||| ||||||||| || ||||||||||||| | Sbjct 299 GGAGAACATTTGAACAGCTCACTGCTGCAGACAAATACGACATAAATCTTGCTGCAAAAA 358 Query 356 TGGGAAGTCCAATGTATACGAATACAGTGTCAGAGCTTCAATTCAAAACATCGCACGGGA 415 |||||| |||||||||| ||| || ||||| |||||||||||||||||||| ||||||| Sbjct 359 TGGGAACTCCAATGTATTGGAACACGGTGTCGGAGCTTCAATTCAAAACATCACACGGGA 418 Query 416 GAACCTCTGAGGAGTTTGGTATGCCCGG-ACCTGGTGGATCCAACGGGGTCTCTTGGGAT 474 |||| |||||| ||||| |||||||||| || ||| |||||||||||||||||||||||| Sbjct 419 GAACATCTGAGCAGTTTCGTATGCCCGGTAC-TGGAGGATCCAACGGGGTCTCTTGGGAT 477 Query 475 GATGGGGCTTATGATGGTCTTAATAAATTGTGTGTTGGAGAAGATGATCATTGTGTGAGC 534 ||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| Sbjct 478 GATGGGGCTTATGATCGTCTGAGTAAATTGTGTGTTGGAGAAGATGCTCATTGTGTGAGC 537 Query 535 TCCGTTGAGTTCCACTATGTTAAGGGAAACGACCGGATAACTCATTGTCACGGAAAGGAT 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 TCCGTTGAGTTCCACTATGTTAAGGGAAACGACCGGATAACTCATTGTCACGGAAAGGAT 597 Query 595 TCGAAAGAACATG-----G-T---TTCATCTCGTCTTTAACCTTCAAAACATCAATGAAT 645 ||||||||||| | | | ||||||||||||||||| |||||||||||||||||| Sbjct 598 TCGAAAGAACACGACAAAGATGGATTCATCTCGTCTTTAACTTTCAAAACATCAATGAAT 657 Query 646 AGAAGCTCTGAGAAATTTGGGACACCGGTTGGTACAAAATTCAAACTTGAGGCAAAAGGG 705 ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 658 AGAAGTTCTGAGAAATTTGGGAAACCGGTTGGTACAAAATTCCAACTTGAGGCAAAAGGG 717 Query 706 CTT-GATAAGATTGTGGGGTTCCGAGGAAGGTCGTCCGTAAATCGTATCAATGCACTCGG 764 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 -TTCGATAAGATTGTGGGGTTCCGAGGAAGGTCGTCCGTAAATCGTATCAATGCACTCGG 776 Query 765 AGCAAATTTTGCGGTGGTGGTAGTTCCTCCGGTCAAGAAACTAAATGCAAAAGGTGGTGT 824 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 AGCAAATTTTGCGGTGGTGGTAGTTCCTCCGGTCAAGAAACTAAATGCAAAAGGTGGTGT 836 Query 825 CCTTGGGAAGGAGTGGGATGATGGAATTCATGACGATGTTCGAATGATAACATTCAAGCT 884 ||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||| Sbjct 837 CCTTGGGAACGAGTGGGATGATGGGATTCACGACGATGCTCGAATGATAACATTCAAGCT 896 Query 885 CTATTTTAACAATGAATACATCACATCCGTTGAATTGGACACTATG 930 |||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 897 CTATTTTAACAAGGAATACATCACATCCGTTGAA--GGACACTATG 940 Score = 268 bits (145), Expect = 6e-71 Identities = 145/145 (100%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 930 GTTCAATACAAACCGTACAACATATCAAGTGTTAAGTCACAGTCCAGAATACACTTACGA 989 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 GTTCAATACAAACCGTACAACATATCAAGTGTTAAGTCACAGTCCAGAATACACTTACGA 1076 Query 990 GGGAACATCATTCAAGCTTGAGGAGAAAGATCACAAGATTGTTGGGTTTTATGGGAAGAC 1049 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1077 GGGAACATCATTCAAGCTTGAGGAGAAAGATCACAAGATTGTTGGGTTTTATGGGAAGAC 1136 Query 1050 TGAAGTTTCTCTCAACCAAATTGGG 1074 ||||||||||||||||||||||||| Sbjct 1137 TGAAGTTTCTCTCAACCAAATTGGG 1161 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53513780970 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5