BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494401
Length=1452
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45810.1 | Symbols: CIPK19, SnRK3.5 | CBL-interacting protei... 2316 0.0
AT4G18700.1 | Symbols: CIPK12, SnRK3.9, ATWL4, WL4 | CBL-intera... 1029 0.0
AT2G34180.1 | Symbols: CIPK13, SnRK3.7, WL2, ATWL2 | CBL-intera... 318 8e-86
> AT5G45810.1 | Symbols: CIPK19, SnRK3.5 | CBL-interacting protein
kinase 19 | chr5:18584942-18586393 FORWARD LENGTH=1452
Length=1452
Score = 2316 bits (1254), Expect = 0.0
Identities = 1389/1455 (95%), Gaps = 6/1455 (0%)
Strand=Plus/Plus
Query 1 ATGGCGGATTTGTTAAGAAAAGTGAAATCGATAAAGAAGAAGCAGGATCAGAGCAATCAA 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGATTTGTTAAGAAAAGTGAAATCGATAAAGAAGAAGCAGGATCAGAGCAATCAT 60
Query 61 CAAGCTCTGATCCTTGGCAAATATGAAATGGGTAGGCTTCTTGGCCATGGAACCTTTGCT 120
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct 61 CAAGCTCTGATCCTTGGCAAATACGAAATGGGTAGGCTTCTTGGCCACGGAACCTTCGCT 120
Query 121 AAAGTTTATCTCGCAAGAAACGCTCAATCTGGAGAAAGCGTAGCCATCAAGGTAATAGAC 180
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 121 AAAGTCTATCTCGCACGAAACGCTCAATCTGGAGAAAGCGTAGCGATCAAGGTAATTGAC 180
Query 181 AAAGAGAAAGTTCTCAAATCTGGTTTAATCGCACACATCAAACGCGAGATCTCGATCTTG 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAAGAGAAAGTTCTCAAATCCGGTTTAATCGCACACATCAAACGCGAGATCTCGATCTTG 240
Query 241 CGTCGTGTTCGTCATCCAAACATCGTTCAGCTATTCGAAGTCATGGCTACGAAGTCCAAG 300
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||
Sbjct 241 CGCCGTGTTCGTCATCCTAACATCGTTCAGCTATTCGAAGTCATGGCGACGAAATCTAAG 300
Query 301 ATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCTAAAGGA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCTAAAGGA 360
Query 361 AGGTTAAAAGAAGAAATGGCACGTAGATATTTTCAACAATTGATCTCCGCCGTATGGTTT 420
||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||
Sbjct 361 AGGTTAAAAGAAGAAATGGCACGTAAATATTTTCAACAGTTGATCTCAGCCGTATCGTTT 420
Query 421 TGTCACTTCCGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTTTTAGACGAA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TGTCACTTCCGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTTTTAGACGAA 480
Query 481 AATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCAGATTCGACAA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 AATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCAGATTCGACAA 540
Query 541 GATGGGTTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGGAGGTTCTTGCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GATGGGTTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGGAGGTTCTTGCT 600
Query 601 CGGAAAGGCTACGACGGAGCTAAAGTTGATATTTGGTCTTGTGGAGTGATCTTGTTCGTG 660
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 601 CGGAAAGGCTACGATGGAGCTAAAGTCGATATTTGGTCTTGTGGAGTGATCTTGTTTGTG 660
Query 661 TTAATGGCGGGGTTTCTACCTTTTCATGACCGGAATGTTATGGCTATGTATAAGAAGATT 720
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 661 TTAATGGCAGGGTTTCTTCCTTTTCATGATCGGAATGTTATGGCTATGTATAAGAAGATT 720
Query 721 TATAAAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAACCGGTTGTTGATT 780
|| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 721 TACAGAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAACCGGTTATTGATT 780
Query 781 CGAATGTTGGAGACTAAACCGGAAAGACGGTTTACAATGCCGGAGATTATGGAGACTAGT 840
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 781 CGAATGTTGGAGACTAAACCGGAGAGACGGTTTACAATGCCGGATATTATGGAGACTAGT 840
Query 841 TGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAGATGATCATCAGCTTTGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAGATGATCATCAGCTTTGT 900
Query 901 AATGTTGTTGATGATGATGAGATCGAATCGATTGAATCGGTTTCGGGGAGGTCTTCTACG 960
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 AACGTTGCTGATGATGATGAGATCGAATCGATTGAATCGGTTTCGGGGAGGTCTTCTACG 960
Query 961 GTTTCTGAACCGGATGACTTAGAGTCTTTTGATGGGAGGAGAAG-GGCGTTTTCGATGCC 1019
|||||||||||||| ||||| ||||||||||||||||||||||| || | || |||||||
Sbjct 961 GTTTCTGAACCGGAAGACTTCGAGTCTTTTGATGGGAGGAGAAGAGGTGGTT-CGATGCC 1019
Query 1020 TAGACCCGCGAGTTTGAATGCTTTCGATCTCATTTCGTTTTCGCCTGGTTTTGATCTTTC 1079
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1020 TAGACCGGCAAGTTTGAATGCTTTCGATCTCATTTCGTTTTCGCCAGGTTTTGATCTTTC 1079
Query 1080 GGGTTTGTTTGAGGATGATCGTGAAGGCTCTAGGTTTGTGTCTGGTGCTCCTGTTGCTCA 1139
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||
Sbjct 1080 GGGTTTGTTTGAGGATGATGGTGAAGGATCTAGGTTTGTGTCTGGTGCTCCTGTTGGTCA 1139
Query 1140 GATCATATCTAAATTGGAGGAAATCGCGAAAATCGTGAGTTTTACGGTGCGAAAGAAGGA 1199
|||||| ||||| |||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 1140 GATCATTTCTAAGTTGGAGGAAATCGCGAGGATTGTGAGTTTTACTGTGCGAAAGAAGGA 1199
Query 1200 TTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTAAGAAAGGTCCATTGTCAATTGC 1259
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1200 TTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAGGAAGTATGAAAGGTCCATTGTCAATTGC 1259
Query 1260 TGCTGAGATATTTGAATTGACTCCAGCTTTGGTTGTTGTTGAAGTTAAGAAGAAAGGAGG 1319
|||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1260 TGCTGAGATATTTGAACTGACACCAGCTTTGGTTGTTGTTGAAGTGAAGAAGAAAGGAGG 1319
Query 1320 TGATAAAATGGAGTATGATGAGTTTTGTAATAAAGAATTGAAACCGAAATTGCAGAATTT 1379
||||||||||||||||||||||||||||||||| || |||||||| || |||||||||||
Sbjct 1320 TGATAAAATGGAGTATGATGAGTTTTGTAATAAGGAGTTGAAACCTAAGTTGCAGAATTT 1379
Query 1380 GTCTTCGGAAAACGGCGAATCGG-TTTCTAGTTCGCGTTCTTTGCCAGC-TTATTTACTT 1437
|||||| ||||| ||| || ||| ||||| ||||||||||||||||| | || |||||||
Sbjct 1380 GTCTTCCGAAAATGGCCAA-CGGGTTTCTGGTTCGCGTTCTTTGCCATCGTT-TTTACTT 1437
Query 1438 TCTGATACTGATTAG 1452
|||||||||||||||
Sbjct 1438 TCTGATACTGATTAG 1452
> AT4G18700.1 | Symbols: CIPK12, SnRK3.9, ATWL4, WL4 | CBL-interacting
protein kinase 12 | chr4:10288798-10290850 REVERSE LENGTH=2053
Length=2053
Score = 1029 bits (557), Expect = 0.0
Identities = 1097/1350 (81%), Gaps = 67/1350 (5%)
Strand=Plus/Plus
Query 60 ACAAGCTCTGATCCTTGGCA-AATATGAAATGGGTAGGCTTCTTGGCCATGGAACCTTTG 118
||||||||| |||| ||| | ||| |||||||||| |||||| |||||||| ||||| |
Sbjct 325 ACAAGCTCTAATCC-TGGGACGATACGAAATGGGTAAGCTTCTCGGCCATGGTACCTTCG 383
Query 119 CTAAAGTTTATCTCGCAAGAAACGCT-CAATCTGGA-GAAAGCGTAGCCATCAAGGTAAT 176
|||||||||| |||||| | |||| | || | | ||||||||||| ||||| |||||
Sbjct 384 CTAAAGTTTACCTCGCACGTAACG-TGAAAAC-AAACGAAAGCGTAGCAATCAAAGTAAT 441
Query 177 AGACAAAGAGAAAGTTCTCAAATCTGGTTTAATCGCACACATCAAACGCGAGATCTCGAT 236
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 442 CGACAAGGAGAAAGTTCTCAAAGGAGGTTTAATCGCACACATCAAACGCGAGATCTCGAT 501
Query 237 -CTTGCGTCGTGTTCGTCATCCAAACATCGTTCAGCTATTCGAAGTCATGGCTACGAA-G 294
||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||| |
Sbjct 502 TCTT-CGACGTGTTCGTCACCCAAACATCGTTCAGCTATTCGAAGTCATGGCGACGAAAG 560
Query 295 TCCAAGATCTATTTCGTAATGGAATATGTTAAAGGAGGTGAATTGTTCAACAAGGTAGCT 354
| |||||||||||||| ||||| |||||| |||||||| || ||||| || ||||||
Sbjct 561 -CTAAGATCTATTTCGTGATGGAGTATGTTCGTGGAGGTGAGTTATTCAATAAAGTAGCT 619
Query 355 AAAGGAAGG-TTAAAAGAAGAAATGGCACGTAGATATTTTCAACAATTGATCTCCGCCGT 413
||||| | ||||| |||||| | || || | |||||| || ||||||||||| || ||
Sbjct 620 AAAGGTCGTCTTAAA-GAAGAAGTAGCTCGCAAATATTTCCAGCAATTGATCTCTGCTGT 678
Query 414 ATGGTTT-TGTCACTTCC-GTGGTGTTTATCATCGAGATTTGAAACCGGAGAATCTTCTT 471
| ||| |||||| | | |||||||||||| ||||| ||||||| ||||||||| ||
Sbjct 679 -TACTTTCTGTCACG-CGAGAGGTGTTTATCATAGAGATCTGAAACCTGAGAATCTT-TT 735
Query 472 -TTAGACGAAAATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTGATCA 530
||||| || ||||| || || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct 736 GTTAGATGAGAATGGTAATCTTAAAGTCTCTGACTTTGGACTTAGTGCTGTCTCTGATCA 795
Query 531 GATTCGACAAGATGGG-TTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCACCGG 589
|||||| ||||||||| || |||||||| |||||||| || |||||||| || || || |
Sbjct 796 GATTCGTCAAGATGGGCTT-TTTCATACGTTTTGTGGTACTCCTGCTTATGTTGCTCCTG 854
Query 590 AGGTTCTT-GCTCGGAAAGGCTACGACGGAGCTAAAGTTGATATTTGGTCTTGTGGAGTG 648
||||| || ||| ||||||| || || | |||||||||||||||||||||||||| ||
Sbjct 855 AGGTT-TTAGCTAGGAAAGGTTATGATGCTGCTAAAGTTGATATTTGGTCTTGTGGTGTT 913
Query 649 ATCTTGTTCGTGTTAATGGCGGGGT-TTCTACCTTTTCATGACCGGAATGTTATGGCTAT 707
|||||||| ||||| ||||| || | || | || |||||||| |||||||||||||||||
Sbjct 914 ATCTTGTTTGTGTTGATGGCTGGTTATT-TGCCGTTTCATGATCGGAATGTTATGGCTAT 972
Query 708 GTATAAGAAGATTTATAAAGGAGATTTTAGGTGTCCGAGATGGTTTCCGGTTGAGATTAA 767
||||||||||||||| | ||| || ||||||||||| || |||||| | |||| |||
Sbjct 973 GTATAAGAAGATTTACAGAGGGGAGTTTAGGTGTCCTAGGTGGTTTTCTACTGAGCTTA- 1031
Query 768 CC-GGTTGTTGATTCGAA--TGTTGGAGACTAAACCGGA-AAGACGGTTTACAATGCCGG 823
|| |||||||| | |||| | |||||||| || ||||| || |||||| || | || |
Sbjct 1032 CCAGGTTGTTG-T-CGAAGCTTTTGGAGACGAATCCGGAGAA-ACGGTTCACTTTCCCTG 1088
Query 824 AGATTATGGAGACTAGTTGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTATGTTGAAG 883
|||||||||||| | |||||| |||||||| ||||||||||||||||||||||| || |
Sbjct 1089 AGATTATGGAGAATTCTTGGTTTAAGAAAGGGTTTAAGCATATTAAGTTTTATGTGGAGG 1148
Query 884 ATGATCATCAGCTT-TGTAATGTTGTTGATGATGATGAGA-TCGAATCGATTGAATCGGT 941
||||| | || || ||||||||||||||||||||||| | | || || | || |||||
Sbjct 1149 ATGAT-A--AG-TTGTGTAATGTTGTTGATGATGATGA-ACTGGAGTC--T-GACTCGGT 1200
Query 942 T---TCGGGGAG-GTCTTCTACGGTTTCTGAACCGGATGACTTAGAGTCTTTTGA---TG 994
|||| || | ||| ||| |||||| |||| || || |||| ||| || |
Sbjct 1201 GGAGTCGGATAGAGA-TTCCGCGGCTTCTGAGTCGGA-GA-TT-GAGTATTTGGAGCCTA 1256
Query 995 GGAGGAGAAG--GGCGTTTTCGATGCCTAGACCCGCGAGTTTGAATGCTTTCGATCTCAT 1052
|||||||| | || | || | |||||||| ||||||||||||||||||||| | ||
Sbjct 1257 GGAGGAGA-GTTGGAGGGTT-G---CCTAGACCTGCGAGTTTGAATGCTTTCGATATTAT 1311
Query 1053 TTCGTTTTCGCCTGGTTTTGATCTT-TCGGGTTTGTTTGAGGATGATCGTGAAGGCTCTA 1111
|||||||||| ||||||||| || |||||||||||||| || ||| | || || ||||
Sbjct 1312 ATCGTTTTCGCAAGGTTTTGAT-TTATCGGGTTTGTTTGATGACGATGGGGAGGGTTCTA 1370
Query 1112 GGTTTGTGTCTGGTGCTCCTGTTGCTCAGATCATATCTAAATTGGAGGAAATCGCGAAAA 1171
||||||| || || ||||| ||| | |||| ||||| || ||||| || || || |||
Sbjct 1371 GGTTTGTTTCGGGAGCTCCGGTTTCGAAGATTATATCGAAGTTGGAAGAGATTGCTAAAG 1430
Query 1172 TCGTGAGTTTTACGGTGCGAAAGAAGGATTGTAAAGTGAGTCTTGAAGGTTCAAGAGAAG 1231
| ||||| ||||| ||| | ||||||||||||| || |||||||||||||||||| |||
Sbjct 1431 TTGTGAGCTTTACTGTGAGGAAGAAGGATTGTAGGGTAAGTCTTGAAGGTTCAAGACAAG 1490
Query 1232 GAAGTAAGAAAGGTCCATTGTCAATTGCTGCTGAGATATTTGAATTGACTCCAGCTTTGG 1291
|| || ||||||||||||| | ||||| || |||||||| |||||||| ||| | ||||
Sbjct 1491 GA-GT--GAAAGGTCCATTGACGATTGCAGCAGAGATATTCGAATTGACACCATCGTTGG 1547
Query 1292 TTGTTGTTGAAGTTAAGAAGAAAGGAGGTGATAAAATGGAGTATGATGAGTTT-TGTAAT 1350
||||||| ||||| |||||||||||||| ||||||| |||||||| || ||| |||||
Sbjct 1548 TTGTTGTGGAAGTCAAGAAGAAAGGAGGAGATAAAACAGAGTATGAAGA-TTTCTGTAAC 1606
Query 1351 AAAGAATTGAAACCGAAATTGCAGAATTTG 1380
|| ||||||||||| || ||||| || |||
Sbjct 1607 AATGAATTGAAACCCAAGTTGCAAAACTTG 1636
> AT2G34180.1 | Symbols: CIPK13, SnRK3.7, WL2, ATWL2 | CBL-interacting
protein kinase 13 | chr2:14430761-14432269 REVERSE LENGTH=1509
Length=1509
Score = 318 bits (172), Expect = 8e-86
Identities = 966/1338 (72%), Gaps = 100/1338 (7%)
Strand=Plus/Plus
Query 60 ACAA-GCTCTGA-TC-CTTGG-CAAATATGAAATGGGTAGGCTTCTTGGCCATGGAACCT 115
|||| ||||| | || | ||| ||| || ||||| || | |||||||||||| |||| ||
Sbjct 144 ACAAGGCTCT-ATTCTCATGGACAAGTACGAAATAGGAAAGCTTCTTGGCCACGGAAGCT 202
Query 116 TTGCTAAAGTTTATCTCGCAAGAAACGCTCAATCTGGAGAAAG-CGTAGCCATCAAGGTA 174
| ||||| || ||| | ||| | ||| ||| ||||| | | | || |||||||| ||
Sbjct 203 TCGCTAAGGTCTATTTAGCACGGAACATTCATTCTGGCG-AGGATGTTGCCATCAAAGTC 261
Query 175 ATAGACAAAGAGAAAG-TTCTCAA-ATCTGGTTTAATCGCACACATCAAACGCGAGATCT 232
|| ||||| ||| ||| | | || | ||| || || || || ||||| ||||| |
Sbjct 262 ATTGACAAGGAG-AAGATAGTGAAGA-GTGGATTGGCCGGTCATATTAAACGGGAGATTT 319
Query 233 CGATCTTGCGTCGTGTTCGTCATCCAAACATCGTTCAGCTATTCGAAGTCATGGCTACGA 292
| ||| | || ||||| || || || |||| || || ||| |||| || ||||||||||
Sbjct 320 CAATCCTCCGCCGTGTCCGCCACCCTTACATTGTACACCTACTCGAGGTTATGGCTACGA 379
Query 293 AGTCCAAGATCTA-TTTCGTAATGGAATATGTTAAAGGAGGTGA-ATTGT-TCAACAAGG 349
|| | ||||| || || || ||||| || ||| ||| || || || | | || | ||
Sbjct 380 AGACAAAGATTTACATT-GTGATGGAGTACGTTCGAGGCGGAGAGCTT-TAT-AATACGG 436
Query 350 TAGCTAAAGGAAGG-TTAAAAGAAGAAATGGC-ACGTAGATATTTTCAACAATTGATCTC 407
| |||| |||| || || ||||| || || | | |||||||| || || ||||||||
Sbjct 437 TGGCTAGAGGACGGCTT-CGAGAAGGAACCGCGA-GGAGATATTTCCAGCAGTTGATCTC 494
Query 408 CGCCGTATGGTTT-TGTCACTTCCGTGGTGTTTATCATCGAGATTTGAAACCGGAGAATC 466
|||| || ||| || ||| ||| |||||||| || || ||| | || | |||||||
Sbjct 495 ATCCGT-TGCTTTCTGCCACAGCCGCGGTGTTTACCACCGCGATCTCAAGCTTGAGAATC 553
Query 467 TTCTTTTAGACGAAAATGGAAACCTAAAAGTCTCTGATTTTGGTCTTAGTGCTGTTTCTG 526
| ||||| ||||| || || ||| | ||||||||||| ||||| || || | ||| || |
Sbjct 554 TGCTTTTGGACGACAAGGGGAACGTGAAAGTCTCTGACTTTGGGCTCAGCGTTGTCTCGG 613
Query 527 ATCAGATTCGA-CAAGATGGGTTATTTCATACTTTTTGTGGGACCCCTGCTTACGTGGCA 585
| ||| || | ||||| || | | ||| || ||||| ||||| || ||||| ||||
Sbjct 614 AGCAG-CTCAAGCAAGAAGGAATCTGTCAAACGTTTTGCGGGACACCAGCTTATTTGGCG 672
Query 586 CCGGAGGTTCTTG-CTCGGAAAGGCTACGACGGAGCTAAAGTTGATATTTGGTCTTGTGG 644
|| |||||| ||| | ||||||| || || || || |||| |||||||||||||||||
Sbjct 673 CCTGAGGTT-TTGACAAGGAAAGGTTATGAAGGTGCAAAAGCCGATATTTGGTCTTGTGG 731
Query 645 AGTGATCTTGTTCGTGTTAATGGCGGGGTT-TCTACCTTTTCATGACCGGAATGTTAT-G 702
|||||||||||| || || ||||| || || ||| || ||| ||||| ||| | || |
Sbjct 732 AGTGATCTTGTTTGTATTGATGGCTGG-TTATCTTCCATTTGATGACAAGAACAT-ATTG 789
Query 703 GCTATGTATA-AGAAGATTTATAAAGGAG-ATTTTAGGTGTCCGAGATGGTTTCCGGTTG 760
| |||||||| | ||||| |||||||| | | |||| |||||| | ||||||| | ||
Sbjct 790 GTTATGTATACA-AAGATATATAAAGG-GCAGTTTAAGTGTCCTAAATGGTTTTCTCCTG 847
Query 761 AGATT--AACCGG-TTGTTGATTCGAATGTTGGAGACTAAACCGGAAAGACGGTTTACAA 817
|| || || || |||| || || ||| | || || || || || | || | ||||
Sbjct 848 AGCTTGCAA--GGCTTGT-GACCCGGATGCTAGACACGAATCCAGATACCCGAATCACAA 904
Query 818 TGCCGGAGATTATGGAG-ACTAGTTGGTTCAAGAAAGGTTTTAAGCATATTAAGTTTTAT 876
| |||||||| ||| || | ||| |||||||||||||| || || ||| | || || |||
Sbjct 905 TACCGGAGATCATGAAGCA-TAGATGGTTCAAGAAAGGGTTCAAACATGTCAAATTCTAT 963
Query 877 GTTGAAGATGATCATCAGCTT-TGTAATGTTGTTGATGATGATGA-GATCGAATCGATTG 934
||||| | ||| | || || |||| | | |||||| |||| ||| || |||||
Sbjct 964 ATTGAAAACGAT-A--AG-TTATGTAGGGAGGATGATGACAATGATGAT-GA--CGATTC 1016
Query 935 A--ATCGGT-T--TCGGGGAGGTCTTCTACGGTTTCTGAACCG-GATGACTTAGAGTCTT 988
| ||| | | || || | || || || | ||| ||| | |||| | ||||| ||
Sbjct 1017 ATCATCATTGTCATCAGGCCGATCATCGACTGCTTCAGAAG-GAGATG-C--AGAGT-TT 1071
Query 989 TTGATGGGAGGAGAAGGGC-GTTTTCGATGCCTAGACCCGCGAGTTTGAATGC-TTTCGA 1046
||| | | ||||| | || | ||||| |||||||||||| | || || ||| ||
Sbjct 1072 --GATATTA--A-AAGGGTTGATT-CAATGCCGAGACCCGCGAGTCTAAACGCATTT-GA 1124
Query 1047 TCTCATTTCGTTTTCGCCTGGTTTTGATCTTTCGGGTTTGTTTGAGGATGATCGTGAAGG 1106
| || | || ||| | | |||||||||||||||||||| || | | | ||||
Sbjct 1125 -C--AT--C-TTATCGT-TC-TCA-GATCTTTCGGGTTTGTTTGAAGAAGGTGGACAAGG 1175
Query 1107 CTCTAGGTTTGTGTCTGGTGCTCCTGTTG-CTCAGATCATATCTAAATTGGAGGAAATCG 1165
| |||||||| |||| ||||||| | | | |||||||||| |||||||| || || |
Sbjct 1176 AGCAAGGTTTGTATCTGCTGCTCCTAT-GACAAAGATCATATCGAAATTGGAAGAGATTG 1234
Query 1166 CGAAA-ATCGTGAGTTTTACGGTGCGAAAGAAGGATTGTAAAGTGAGTCTTGAAGGTTCA 1224
| ||| | |||| |||| |||| | ||||||||||| | ||||| || |||||||
Sbjct 1235 CCAAAGAG-GTGAAATTTATGGTGAGGAAGAAGGATTGGAGCGTGAGGCTAGAAGGTTGT 1293
Query 1225 AGAGAAGGAAG-TAAGAAAGGTCCATTGTCAATT-GC-TGCTGAGATATTTGAATTGACT 1281
||||||||| | ||| | || || ||| ||||| | | | ||||| ||||| ||||
Sbjct 1294 AGAGAAGGA-GCTAA-A--GGACCGTTGACAATTAGAGT-C-GAGATCTTTGAGCTGACG 1347
Query 1282 CCAGCT-TTGGTTGTTGTTGAAGTTAAGAAGAAAGGAGGTGATA-A-AATGGAGTATGAT 1338
||| || ||| | || |||||||| |||||||||||||| ||| | || | |||||||
Sbjct 1348 CCATCTCTTG-TGGTGGTTGAAGTGAAGAAGAAAGGAGGAAATATAGAA-G-AGTATGAA 1404
Query 1339 GAGTTTTGTAATAAAGAA 1356
|||||||| || || |||
Sbjct 1405 GAGTTTTGCAACAAGGAA 1422
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71585977170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5