BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494417
Length=1343
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45670.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 2093 0.0
AT4G18970.2 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 918 0.0
> AT5G45670.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr5:18528494-18530450 FORWARD LENGTH=1481
Length=1481
Score = 2093 bits (1133), Expect = 0.0
Identities = 1279/1349 (95%), Gaps = 12/1349 (1%)
Strand=Plus/Plus
Query 1 ATTCTTCAAAACTATATTATATAAACACATTTTTAGTTTCTTCACAATTCACAAAACATC 60
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1 ATTCTTCAAAACTATATTATATAAACACATTTTTCGTTTCTTCAC-ATTCACAAAACATC 59
Query 61 TCTCTCCTTCTTCTCCCTTTCACTCACTATCTTGCTCTTAGAAAAAGATGGCGAGAATGT 120
|||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 60 TCTCTCTTTCTTCTCCCATTCACTCACTATCTTGCTCCTAGAAAAAGATGGCGAGAATGA 119
Query 121 GTTTAATGAT-A--ATGATTATGGTTGCTATGACCATG---AACATTGCTAAGAGTGATC 174
|||| ||||| | ||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 120 GTTTGATGATCATGATGATTATGGTTGCTGTGACCATGATTAACATTGCTAAGAGTGATC 179
Query 175 CCATTGCACCCTGTTACTTCATATTTGGTGACTCTTTGGTTGATAATGGCAATAACAATC 234
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 180 CCATTGCACCATGTTACTTCATATTTGGTGACTCTTTGGTTGATAATGGCAACAATAATC 239
Query 235 AGCTTCAGTCATTAGCTAGAGCTAATTACTTTCCTTATGGTATTGATTTTGCTGCCGGTC 294
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 240 AGCTTCAGTCATTAGCTAGAGCTAATTACTTTCCTTACGGTATTGACTTTGCTGCCGGTC 299
Query 295 CAACCGGTCGGTTTAGCAACGGCAGAACCACCGTTGATGTTATCGCTGAGCTTTTGGGGT 354
||||||||||||||||||||||| |||||| || |||||||||||| |||||||||| |
Sbjct 300 CAACCGGTCGGTTTAGCAACGGCTTAACCACTGTCGATGTTATCGCTCAGCTTTTGGGTT 359
Query 355 TCGACGACTACATTACACCGTACGCCTCTGCTAGAGGACAAGACATTCTCCGAGGAGTTA 414
|||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct 360 TCGAGGACTACATTACACCTTACGCTTCTGCAAGAGGACAAGACATTCTCCGAGGAGTTA 419
Query 415 ACTATGCTTCCGCTGCTGCCGGAATCCGAGATGAAACCGGCAGACAATTGGGAGGTAGAA 474
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 420 ACTATGCTTCCGCTGCTGCCGGAATCCGAGACGAAACCGGCAGACAATTGGGAGGTCGAA 479
Query 475 TAGCATTTGCAGGACAAGTAGCTAATCACGTGAACACTGTGTCACAAGTAGTGAACATAC 534
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 480 TAGCATTTGCAGGGCAAGTAGCAAATCACGTGAACACTGTGTCACAAGTAGTGAACATAC 539
Query 535 TTGGTGATCAAAACGAAGCCTCGAATTACCTCAGCAAATGCATTTACTCTATCGGATTAG 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TTGGTGATCAAAACGAAGCCTCGAATTACCTCAGCAAATGCATTTACTCTATCGGATTAG 599
Query 595 GCAGTAACGATTATCTCAACAACTACTTCATGCCCACTTTTTACTCTACCGGTAACCAGT 654
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 600 GCAGTAACGATTATCTTAACAACTACTTCATGCCTACTTTTTACTCTACCGGTAACCAGT 659
Query 655 TCTCCCCCGAATCCTATGCCGACGATCTCGTTACTCGTTACACCGAGCAACTCAGGATAT 714
|||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||
Sbjct 660 TCTCCCCCGAATCCTATGCCGACGATCTCGTTGCCCGTTACACCGAACAACTCAGGGTAC 719
Query 715 TGTATACCAATGGAGCGAGGAAGTTTGCGTTGATAGGAGTCGGGGCAATCGGTTGCAGCC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGTATACCAATGGAGCGAGGAAGTTTGCGTTGATAGGAGTCGGGGCAATCGGTTGCAGCC 779
Query 775 CGAATGAGCTAGCACAGAACAGCAGAGATGGAAGAACGTGTGACGAAAGAATCAACTCAG 834
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 780 CGAACGAGCTAGCTCAAAACAGCAGAGACGGAAGAACGTGTGACGAAAGAATCAACTCAG 839
Query 835 CAAACAGAATCTTCAACAGCAAACTTATATCTATGGTTGACGCTTTTAACCAGAACACAC 894
| ||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct 840 CGAACAGAATCTTTAACAGCAAACTCATATCTATAGTCGACGCTTTTAACCAGAACACAC 899
Query 895 CAGACGCAAAATTCACTTACATCAACGCCTATGGGATCTTCCAAGACATTGTTACAAACC 954
|||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct 900 CAGATGCAAAATTCACTTACATCAACGCTTATGGCATCTTCCAAGACATTATTACAAACC 959
Query 955 CTGCGCGATACGGGTTTAGTGTGACAAATGCAGGATGTTGTGGAGTTGGGAGGAATAATG 1014
|||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 960 CTGCTCGCTACGGGTTTAGAGTGACAAATGCAGGATGTTGTGGAGTTGGGAGGAACAATG 1019
Query 1015 GACAGATAACTTGTCTTCCAGGTCAAGCACCATGTCTAAATAGGAATGAGTATGTGTTTT 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GACAGATAACTTGTCTTCCAGGTCAAGCACCATGTCTAAATAGGAATGAGTATGTGTTTT 1079
Query 1075 GGGATGCGTTTCATCCCGGTGAAGCTGCGAATATTGTTATCGGAAGACGATCTTTTAAGC 1134
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1080 GGGATGCGTTTCATCCCGGTGAAGCTGCGAATATTGTTATTGGAAGACGATCTTTTAAGC 1139
Query 1135 GAGAAGCTGCTTCTGATGCTCATCCTTATGATATTCAGCAGCTAGCATCTCTCTAAAGAG 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 GAGAAGCTGCTTCTGATGCTCATCCTTATGATATTCAGCAGCTAGCATCTCTCTAAAGAG 1199
Query 1195 AGAAAGATCTTTTGCTTGTGTAAGTGTTTTGATAGTTCCTTCAATGGCAGCTGAGTTTTG 1254
|||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct 1200 AGAAAGATCTTTTGGTTGTCTAAGTATTTTGATAGTTC-TTCAATGGCAGCTGAGTTTTG 1258
Query 1255 GACTCAAGaaaaaaaaaGTGATTTGGTTTGTGTTATGTGATGTCATAACTGTTTATGTAA 1314
|||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1259 GACTCAAGAAGAA----GTGATTTGGTTTGTGTTGTGTGATGTCATAACTGTTTATGTAA 1314
Query 1315 TGATTTGGAGTTACTGTTTCTCTCTATTT 1343
||||||||||||||||||| ||||| |||
Sbjct 1315 TGATTTGGAGTTACTGTTTATCTCTTTTT 1343
> AT4G18970.2 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr4:10388722-10390991 REVERSE LENGTH=1569
Length=1569
Score = 918 bits (497), Expect = 0.0
Identities = 899/1091 (82%), Gaps = 35/1091 (3%)
Strand=Plus/Plus
Query 106 AGATGGCGAGAATGTGTTTAATGATAATGATTATGG-T-T-GCTATGACCATGAACATTG 162
||||||| ||| | ||| ||||||| ||| ||||| | | |||||| | |||||||| |
Sbjct 182 AGATGGCTAGAGTTTGTGTAATGATGATGGCTATGGCTATAGCTATGGCTATGAACATAG 241
Query 163 CTAAGAGTGATCCCATTGCACCCTGTTACTTCATATTTGGTGACTCTTTGGTTGATAATG 222
||| | ||||||| || ||||| |||||||||||||| ||||||||||||||||||| ||
Sbjct 242 CTATGGGTGATCCAATAGCACCATGTTACTTCATATTCGGTGACTCTTTGGTTGATAGTG 301
Query 223 GCAATAACAATCAGCTTCA-GTCAT-TAGCTAGAGCTAATTACTTTCCTTATGGTATTGA 280
| || ||||||| |||| | || | |||| |||||||||||||| ||||| ||||| ||
Sbjct 302 GAAACAACAATCGGCTT-ACCTC-TCTAGCAAGAGCTAATTACTTCCCTTACGGTATCGA 359
Query 281 TTTTGCTG-CCGGTCCAACCGGTCGGTT-TAGCAACGGCAGAACCACCGTTGATGTTATC 338
|| | | ||||||||||||||| || | |||||| | ||||||||| ||||| |||
Sbjct 360 -CTTCCAGTACGGTCCAACCGGTCGCTTCT-CCAACGGAAAAACCACCGTCGATGTCATC 417
Query 339 GCTGAGCTT-TTGGGGTTCGACGACTACATTACACCGTACGCCTCTGCTAGAGGACAAGA 397
|||||||| || || ||||| ||||||||||||||||| || || || ||| ||||
Sbjct 418 ACTGAGCTTCTT-GGTTTCGATGACTACATTACACCGTATTCCGAAGCAAGGGGAGAAGA 476
Query 398 CATTCTCCGAGGAGTTAACTATGCTTCCGCTGCTGCCGGAATCCGAGATGAAACCGG-CA 456
|| || ||||||| ||||| ||||| || ||||||||||||||||| ||||| || |
Sbjct 477 TATCCTAAGAGGAGTAAACTACGCTTCTGCAGCTGCCGGAATCCGAGAAGAAACTGGTC- 535
Query 457 GACAATTGGGAGGTAGAATAGCATTTGCAGGACAAGTAGCTAATCACGTGAACACTGTGT 516
|||||||||||| ||||||| |||||||||| |||||||||||||| || ||||||||||
Sbjct 536 GACAATTGGGAGCTAGAATAACATTTGCAGGGCAAGTAGCTAATCATGTAAACACTGTGT 595
Query 517 CACAAGTAGTGAACATACTTGGTGATC-AAAACGAAGCCT-CGAATTACCTCAGCAAATG 574
||||||| ||||||||||| || || | | || |||| || | |||||||| || |||||
Sbjct 596 CACAAGTTGTGAACATACTCGGAGA-CGAGAATGAAG-CTGCTAATTACCTAAGTAAATG 653
Query 575 CATTTACTCTATCGGATTAGGCAGTAACGATTATCTCAACAACTACTTCATGCCCACTTT 634
||| ||||| ||||| |||||||||||||| |||||||| ||||| || ||| || |||
Sbjct 654 CATCTACTCAATCGGGTTAGGCAGTAACGACTATCTCAATAACTATTTTATG-CCTGTTT 712
Query 635 -TTACTCTACCGGTAACCAGTTCTCCCCCGAAT-CCTATGCCGACGATCTCGT-TACTCG 691
|||||| ||||| | ||||| || ||||| || |||| ||| |||| ||| | || ||
Sbjct 713 ATTACTCCACCGGGAGCCAGTACT-CCCCGGATGCCTACGCCAACGACCTCATAAAC-CG 770
Query 692 TTACACCGAGCAACTCAGGATATTGTATACCAATGGAGCGAGGAAGTTTGCG-TTGATAG 750
||||||||||||||| ||||| |||||| ||| |||||||||||||||||| | | | |
Sbjct 771 CTACACCGAGCAACTCCGGATAATGTATAACAACGGAGCGAGGAAGTTTGCGCTAG-TTG 829
Query 751 G-AGTCGGGGCAATCGGTTGCAGCCCGAATGAGCTAGCACAGAACAGCAGAGA-TGGAAG 808
| | | || ||||| || ||||| || |||||||| || || ||||||||||| || |
Sbjct 830 GTA-TAGGTGCAATAGGATGCAGTCCAAATGAGCTGGCTCAAAACAGCAGAGACGGGGTG 888
Query 809 AACGTGTGACGAAAGAATCAACTCAGCAAACAGAATCTTCAACAGCAAACTTATATCTAT 868
|| ||||||||||| ||||| || || ||||||||||||||||| || ||| | ||| |
Sbjct 889 -ACTTGTGACGAAAGGATCAATTCCGCTAACAGAATCTTCAACAGTAAGCTTGTGTCTCT 947
Query 869 GGTTGA-CGCTTTTAACCAGAACACACCAGACGCAAAATTCACTTACATCAACGCCTATG 927
|||||| | | || ||||| |||||||||| || || ||||||||||| || || ||||
Sbjct 948 GGTTGATCAC-TTCAACCAAAACACACCAGGGGCCAAGTTCACTTACATTAATGCTTATG 1006
Query 928 GGATCTTCCAAGACATTGTTA-CAAACCCTGCGCGATACGGGTTTAGTGTGACAAATGCA 986
| ||||||||||||| || || | || ||| | || || |||||||| |||||||| ||
Sbjct 1007 GTATCTTCCAAGACA-TGGTAGCTAATCCTTCTCGCTATGGGTTTAGGGTGACAAACGCG 1065
Query 987 GGATGTTGTGGAGTTGGGAGGAATAATGGACAGATAACTTGTCTTCCAGGTCAAGCACCA 1046
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct 1066 GGATGTTGTGGAGTTGGGAGGAACAATGGACAGATAACTTGTCTTCCGGGTCAAGCTCCA 1125
Query 1047 TGTCTAAATAGGAATGAGTATGTGTTTTGGGATGCGTTTCATCCCGGTGAAGCTGCGAAT 1106
||||| || ||| | ||||||||||| ||||| ||||||||||| || ||||||||||||
Sbjct 1126 TGTCTTAACAGGGACGAGTATGTGTTCTGGGACGCGTTTCATCCAGGAGAAGCTGCGAAT 1185
Query 1107 ATTGTTATCGGAAGACGATCTTTTAAGCGAGAAGCTGCTTCTGATGCTCATCCTTATGAT 1166
|||| ||||| || ||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 1186 GTTGTCATCGGTAGTCGATCTTTTCAGAGAGAATCTGCTTCTGATGCTCATCCTTATGAT 1245
Query 1167 ATTCAGCAGCT 1177
|| ||||||||
Sbjct 1246 ATCCAGCAGCT 1256
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66114117765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5