BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494420
Length=2394
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45640.1 | Symbols: | Subtilisin-like serine endopeptidase ... 2231 0.0
AT5G45650.1 | Symbols: | subtilase family protein | chr5:18513... 887 0.0
> AT5G45640.1 | Symbols: | Subtilisin-like serine endopeptidase
family protein | chr5:18507489-18511616 REVERSE LENGTH=2265
Length=2265
Score = 2231 bits (1208), Expect = 0.0
Identities = 1329/1389 (96%), Gaps = 2/1389 (0%)
Strand=Plus/Plus
Query 210 TAGCATCAATGGCTTCGCGGCTGAGCTAACACTGGACCAAGCCTCTAGACTCAAAGAACT 269
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 108 TAGCATCAATGGCTTCGCGGCTGAGCTAACACCGGATCAAGCCTCTAGACTCAAAGAACT 167
Query 270 CAAAGGAGTTATATCGGTATTCAAGAGCGATCCGAGAAAGTATAAGATCCATACGACAAG 329
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 168 CAAAGAAGTTGTATCGGTATTCAAGAGCGATCCGAGAAAGTATAAGATCCATACGACAAG 227
Query 330 ATCGTGGGAATTTGTAGGGTTAAAGGAGGAAGAAGGCGAAGATTATCGTAGTGATGGTGA 389
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 228 ATCATGGGAATTTGTAGGGTTAAAGGAGGAAGAAGGCGAAGATTATCGTAGTGACGGTGA 287
Query 390 TGCCCCACGTCACAAATATGATGTGAGTGACCGGTTTCGTGTCGGAAGAAAGTTCTTGAA 449
|||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||
Sbjct 288 TGCCCCACGTCACAAATATGATGTAAATGACCGGTTTCGTGTCGGGAGAAAGTTCTTGAA 347
Query 450 GAATGCAAAACACGGCGATGGGGTCATAGTTGGTGTTATCGATAGTGGGGTGTGGCCAGA 509
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 348 GAATGCAAAACACGGCGATGGGGTCATAGTTGGTCTTATCGATAGTGGGGTGTGGCCAGA 407
Query 510 ATCAAGGAGTTTCGATGACAAAGGAATGGGACCAATTCCAGAATCTTGGAAAGGAATCTG 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 ATCAAGGAGTTTCGATGACAAAGGAATGGGACCAATTCCAGAATCTTGGAAAGGAATCTG 467
Query 570 CCAAACCGGTGTTTCCTTCAACTCTTCCCACTGTAATCGGTACTACGCAAGAGGGTACGA 629
||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 468 CCAAACCGGTGTTGCCTTCAACTCTTCCCATTGTAATCGGTACTATGCAAGAGGGTACGA 527
Query 630 GAGATATTACGGAGCGTTCAATGCCGAAGCAAACAAAGACTTCTTGTCTCCACGAGACGC 689
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 528 GAGATATTACGGACCGTTCAATGCCGAAGCTAACAAAGACTTCTTGTCTCCACGAGACGC 587
Query 690 TGATGGACATGGTTCCCACACAGCTTCAACCGGCGTTGGTCGCCGAGTAAACGGTGTTTC 749
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 588 TGATGGACATGGTTCCCACACAGCTTCAACCGCCGTTGGTCGCCGAGTAGACGGTGTTTC 647
Query 750 TGCTCTCGGCGGTATTGCTATGGGCACGGCTTCAGGCGGCGCCTCATTGGCTCGTCTTGC 809
||| || ||||||||||||||||| ||||||||||||||||| ||| | |||||||| ||
Sbjct 648 TGCACTAGGCGGTATTGCTATGGGTACGGCTTCAGGCGGCGCTTCACTAGCTCGTCTCGC 707
Query 810 TGTTTACAAAGCTTGTTGGGCGATTCCAAACACGGAAAAATACGCCACAAACACTTGTTT 869
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 708 CGTTTACAAAGCTTGTTGGGCGGTTCCAAACAAGGAAAAATACGCCACAAACACTTGTTT 767
Query 870 TGATGAAGATATGTTGGCTGCGTTTGACGATGCGATTGCTGATGGTGTCAATGTTATCAG 929
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 768 TGATGAAGATATGTTGGCTGCGTTTGACGATGCCATTGCTGATGGTGTCAATGTTATCAG 827
Query 930 TATTTCTATTGGAGCGGTTGAACCTCATACGTATTTGGAGGATGGAATAGCGATCGGAGC 989
||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 828 TATTTCTATTGGAACTGTTGAACCTCACACGTATTTGGAGGATGGAATCGCGATCGGAGC 887
Query 990 GTTACACGCGGTTAAAAGAGATATTGTGGTTGCGGCTAGCGCTGGAAATGATGGACCGGC 1049
||| || || ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 888 GTTGCATGCAGTTAAAAGAGATATTGTGGTTGCGGCTAGCGCTGGAAATGATGGACCTGC 947
Query 1050 G-GGGCAAACTCTGTCGAATCCAGCTCCGTGGATTATTACCGTGGGAGCTAGTAGTCTTG 1108
| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 948 GCGGG-AAACTCTGTCGAATCCAGCTCCGTGGATTATTACCGTCGGAGCTAGTAGTCTTG 1006
Query 1109 ATCGATTTTTCGTAGGCCGTCTTGAACTTGGTGATGGCTATATATTCGAGTCGGACTCAT 1168
|||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1007 ATCGGTTTTTCGTCGGCCGTCTTGAACTTGGTGATGGCTATGTATTCGAGTCGGACTCAT 1066
Query 1169 TAACAACATTAAAGATGGACAATTTTGCTCCTCTAGTCTACGCTCCTGACGTGGTTGTTC 1228
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1067 TAACAACATTAAAGATGGACAATTATGCTCCTCTAGTCTACGCTCCTGACGTGGTTGTTC 1126
Query 1229 CCGGCGTTTCAAGGAACGACGCATTGCTATGTTTACCGAATTCACTTTCACCGGATCTTG 1288
| ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||
Sbjct 1127 CAGGCGTTTCAAGGAACGACGCAATGCTATGTTTACCGAATGCACTTTCACCTGATCATG 1186
Query 1289 TGAGAGGTAAAGTGGTACTATGTTTGAGAGGTTACGGTTCAGGTTCAACAATTGGTAAAG 1348
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1187 TGAGAGGTAAAGTGGTATTATGTTTAAGAGGTTACGGTTCAGGTTCAACAATTGGTAAAG 1246
Query 1349 GTATTGAGGTAAAGCGAGCCGGAGGAGTTGGTATGATTTTAGCAAATTCTCGGGATAACG 1408
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1247 GTCTTGAGGTAAAGCGAGCCGGAGGAGTTGGTATGATATTAGCAAATTCTCGGGATAACG 1306
Query 1409 ATGCATTCGACGTTGAGTCTCATTTCGTACCAACTGTTTTGGTTTTCTCATCCACGGTCG 1468
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 1307 ATGCATTCGACGTTGAGTCTCATTTCGTACCAACTGCTTTGGTTTTCTCATCAACGGTCG 1366
Query 1469 ATAGGATTCTCGATTACATCTACAATACTTATGAACCGGTTGCTTTCATTAAACCAGCAG 1528
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1367 ATAGAATTCTCGATTACATCTACAATACTTATGAACCGGTTGCTTTCATCAAACCGGCAG 1426
Query 1529 AAACAGTACTTTACCGAAACCAACCGGAAGATTCAGTTTACCTATACAAACCGGCTCCTT 1588
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
Sbjct 1427 AAACAGTACTTTACCGAAACCAACCGGAAGATTCGGTTTACCCATACAAACCGGCTCCAT 1486
Query 1589 TTATGACTA 1597
|||||||||
Sbjct 1487 TTATGACTA 1495
Score = 1168 bits (632), Expect = 0.0
Identities = 724/769 (94%), Gaps = 4/769 (1%)
Strand=Plus/Plus
Query 1628 TTCTTCCGGATATTATTGCGCCAGGACTTAATATATTAGCCGCATGGAGTGGGGCGGATT 1687
|||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1499 TTCTACCGGATATTATCGCGCCAGGACTGAATATATTAGCCGCATGGAGCGGGGCGGATT 1558
Query 1688 CAGCGAGCAAAGATTCAATAGACCGACGAGTTTTAGGTTATAATCTCGACTCAGGAACTT 1747
| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1559 CGGCAAGCAAAGATTCGATAGACCGACGAGTTTTAGATTATAATCTCGACTCAGGAACTT 1618
Query 1748 CTATGTCTTGTCCTCATGTTGCTGGTGCAATTGCCCTTCTCAAAAGCATGCA-CCCTTCA 1806
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1619 CTATGTCTTGCCCTCATGTTGCTGGTGCAATTGCCCTTCTCAAAAGCATGCATCCC-ACA 1677
Query 1807 TGGAGTAGTGCTGCTATAAGATCTGCCCTCATGACCACTGCTTCGATGACCAACGAGGAC 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 TGGAGTAGTGCTGCTATAAGATCTGCCCTCATGACCACTGCTTCGATGACCAACGAGGAC 1737
Query 1867 AATGAACCAATCCAAGACTATGATGGTTCACCCGCAAACCCATTTGCGCTTGGGTCAGGA 1926
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1738 AATGAACCAATCCAAGACTATGATGGTTCACCCGCAAACCCATTTGCACTTGGGTCAAGA 1797
Query 1927 CATTTTAGACCAACAAAAGCTGCATCTCCCGGTTTAGTCTACGATGCATCATACCAATCT 1986
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1798 CATTTTAGACCAACGAAAGCTGCATCTCCCGGTTTAGTCTACGATGCATCATACCAATCT 1857
Query 1987 TACCTTCTATACTGTTGTTCGGTTGGTTTAACCAATCTTGACCCGACATTCAAATGTCCA 2046
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1858 TACCTTCTCTACTGTTGTTCAGTTGGTTTAACCAATCTTGACCCGACATTCAAATGTCCA 1917
Query 2047 AGTAGAATTCCTCTCGGTTATAACCTAAATTACCCGTCAATCTCAATACCATATCTCACT 2106
|||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1918 AGTAGAATCCCTCCCGGTTATAACCTAAATTACCCGTCAATCTCAATTCCATATCTCAGT 1977
Query 2107 GGAACAGTGGCCGTTACGAGGACGGTCACATGTGTTGGACGACCGGGTAATTCAACAAGC 2166
|| |||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1978 GGGACAGTGACCGTTACAAGGACGGTTACATGTGTTGGACGAACGGGTAATTCAACAAGC 2037
Query 2167 GTATATGTCTTCAACGCTCAACCGCCGTATGGTGTCATTG-TTAAAGCTGAACCAAATGT 2225
||||||||||| || ||||||||||| | |||||| ||| |||| ||||||||||||||
Sbjct 2038 GTATATGTCTTTAATGCTCAACCGCCAAACGGTGTC-TTGGTTAAGGCTGAACCAAATGT 2096
Query 2226 TTTGGTCTTTGATCGGATTGGTCAGAAGAAGCGGTTTAACATCATTTTTACGACACAGGG 2285
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 2097 TTTGGTCTTTGATAAGATTGGTCAGAAGAAGCGGTTTAACATCATTTTTACTACACAGAG 2156
Query 2286 ATACGAGTTTACAGGTGAGGCTCGGAGGGATCGATATCGGTTTGGATGGTTTAGTTGGAC 2345
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2157 ATATGAGTTTACAGGTGAGGCTCGGAGGGATCGATATCGGTTTGGATGGTTTAGCTGGAC 2216
Query 2346 CGATGGACTTCATGTTGTGAGGAGTCCAATTTCTGTTTCCTTAGTTTGA 2394
|||||||| |||||||||||||||| ||||| ||||||| ||||| |||
Sbjct 2217 CGATGGACATCATGTTGTGAGGAGTTCAATTGCTGTTTCTTTAGTATGA 2265
Score = 86.1 bits (46), Expect = 1e-15
Identities = 57/62 (92%), Gaps = 1/62 (2%)
Strand=Plus/Plus
Query 11 TTTCTCTATCCCTTCTTCTCTTTCTCCTTCCTCTCTTAGCTTCATGCACTAAAGAGAAAC 70
|||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 27 TTTC-CTTTCCCTTCTCCTCTTTCTCGTTCCTCTCTTAGCTTCATGCACTAAAGAGAAGC 85
Query 71 AG 72
||
Sbjct 86 AG 87
> AT5G45650.1 | Symbols: | subtilase family protein | chr5:18513431-18518868
REVERSE LENGTH=2543
Length=2543
Score = 887 bits (480), Expect = 0.0
Identities = 1122/1419 (79%), Gaps = 95/1419 (7%)
Strand=Plus/Plus
Query 13 TCTCTATCCCTTCTTCTCTTTCTCCTTCCTCTCTTAGCTTCATGCACTAAAGAGAAACAG 72
||||| |||| ||| ||||||||| |||| |||||||| ||||| || |||| ||||||
Sbjct 96 TCTCT-TCCC-TCTCCTCTTTCTCATTCCCCTCTTAGCCTCATGTGCTGAAGAAAAACAG 153
Query 73 GTGTATATTGTTTATTTTGGAGAACATAAAGGTGATAAAGCCTTTCATGAAATTGAAGCT 132
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 154 GTGTATATTGTCTATTTTGGAGAACATAAAGGTGATAAAGCCTTTCATGAAATTGAAGAA 213
Query 133 CATCATCACTCTTATCTTCAATCTGTTAAAGAATCCGAAGAAGATGCCAAATCTTCGCTA 192
|||||||| |||||||||||||| |||||||||||||||||||| || | | | |||||
Sbjct 214 CATCATCATTCTTATCTTCAATCGGTTAAAGAATCCGAAGAAGACGCTAGAGCATCGCTC 273
Query 193 TTGTATAGCTACAAGCATAGCATCAATGGCTTCGCGGCTGAGCTAACAC-TGGACCAAGC 251
|||||||||||||| |||||||||||||||||||||||||||||||| | || |||||||
Sbjct 274 TTGTATAGCTACAAACATAGCATCAATGGCTTCGCGGCTGAGCTAACCCCTG-ACCAAGC 332
Query 252 CTCTAGACTC-AAAGAACT--CAAAGGAGTTATATCGGTATTCAAGAGCGATCCGAGAAA 308
||||| ||| ||| || | || ||| || | || |||||||||||| |||| |||||
Sbjct 333 CTCTAAACTAGAAA-AATTAGCAGAGG--TTGTTTCAGTATTCAAGAGCCATCCAAGAAA 389
Query 309 GTAT-AAG-ATCCATACGACAAGATCGTGGGAATTTGTAGGGTTAAAGGAGGAAGAAGGC 366
||| ||| | | |||||||| | || |||||||||||||| || ||||||||||| |
Sbjct 390 ATATGAAGCA-C-ATACGACACGGTCATGGGAATTTGTAGGATTGGAGGAGGAAGAAACC 447
Query 367 GAAGATTATCGTAGTGATGGTGATGCCCCACGTC-ACAAATATGATGT-GAGTGACCGGT 424
|| | ||||||| | | || ||||| | ||| |||||| || ||| ||||
Sbjct 448 GA-------C--AGTGATG-T--T-CC--ACGTCGAAAAA-ATGATGCCGA-TGATCGGT 490
Query 425 TTCGTGTCGGAAGAAAGTTCTTGAAGAATGCAAAACACGGCGATGGGGTCATAGTTGGTG 484
||||||| |||||||| || |||||||| ||||| || || ||||| |||| || ||||
Sbjct 491 TTCGTGTGGGAAGAAATTTTTTGAAGAAGGCAAAGCATGGTGATGGAATCATCGTCGGTG 550
Query 485 TTATCGATAGTGGGGTGTGGCCAGAATCAAGGAGTTTCGATGACAAAGGAATGGGACCAA 544
|| |||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 551 TTCTCGACAGTGGTGTGTGGCCAGAATCAAAGAGTTTCAATGACAAAGGAATGGGACCAG 610
Query 545 TTCCAGAATCTTGGAAAGGAATCTGCCAAACCGGTGTTTCCTTCAACTCTTCCCACTGTA 604
||||| |||| ||||||||||||||||||||||| ||| |||| |||||||| |||||||
Sbjct 611 TTCCAAAATCATGGAAAGGAATCTGCCAAACCGGAGTTGCCTTTAACTCTTCTCACTGTA 670
Query 605 ATCGG----T-ACT--A-CGC---A--A-G--A--GGGTACGAGAGATATTACGGAGCGT 646
| ||| | | | | || | | | | |||||||| ||||||||||||||||
Sbjct 671 ACCGGAAAATTATTGGAGCGAGGTATTACGTGAAAGGGTACGAAAGATATTACGGAGCGT 730
Query 647 TCAATGCCGA-AGCAAACAAAGACTTCTTGTCTCCACGAGA-CGCTGATGGACATGGTTC 704
|||| || | ||||||||||||||||||||||||| |||| | | || |||||||| ||
Sbjct 731 TCAACGCT-ACAGCAAACAAAGACTTCTTGTCTCCAAGAGATCCC-GACGGACATGGGTC 788
Query 705 CCACACAGCTTCAACCGGCGTTGGTCGCCGAGTAAACGGTGTTTCTGCTCTCGGCGGTAT 764
|||||||||||| || | |||||| || ||||| ||||| || || || |||||| |
Sbjct 789 CCACACAGCTTCTACTGCCGTTGGCCGTCGAGTTCTCGGTGCATCCGCACTTGGCGGT-T 847
Query 765 T-GCTATGGGCACGGCTTCAGGCGGCGC-CTCATTGGCTCGTCTTGCTGTTTACAAAGCT 822
| || | |||| |||| || ||||| || | | || |||||||| ||| |||||||||||
Sbjct 848 TCGCCAAGGGCTCGGCATCGGGCGGTGCAC-CGTTAGCTCGTCTAGCTATTTACAAAGCT 906
Query 823 TGTTGGGCGATTCCAAACACGGAAAAA-TACGCCAC-AAACA-CTTGTTTTGATGAAGAT 879
|||||||| | || || |||||||| | | | ||| | || || | || || ||
Sbjct 907 TGTTGGGCCAAGCCCAATGCGGAAAAAGTT-GA-AGGAAATATCT-GTCTAGAAGAGGAC 963
Query 880 ATG-TTGGCTGCGTTTGACGATGCGATTGCTGATGGTGT-CAATGTTATCAGTATTTCTA 937
||| ||| | ||| | || || || || |||||||| || || || ||||| ||||| |
Sbjct 964 ATGCTTGCC-GCGATCGATGACGCCATCGCTGATGGCGTTCAC-GTCATCAGCATTTCCA 1021
Query 938 TTGGAGCGGTTGAACCTCATACGTATTTGGAG--GATGGAATAGCGATCGGAGCGTTACA 995
| ||| || || ||| | | |||| | |||||||| ||||| || ||||| ||
Sbjct 1022 TCGGAACGACCGAGCCTTTTCC--ATTTACACAAGATGGAATCGCGATGGGGGCGTTGCA 1079
Query 996 CGCGGTTAAAAGAGA-TATTGTGGTTGCGGCTAGCGCTGGAAATG-ATGGACCG--GCGG 1051
|||||||| || || |||||||||||| ||||||||||| ||| | || || || |
Sbjct 1080 TGCGGTTAAGAG-GAATATTGTGGTTGCTGCTAGCGCTGGGAATTCAGGG-CCAAAGCCG 1137
Query 1052 GGCAAACTCTGTCGAATCCAGCTCCGTGGATTATTACCGTGGGAGCTAGTAGTCTTGATC 1111
|| || || ||||||||| || ||||||||||| || || |||||||||| ||||||||
Sbjct 1138 GG-AA-CTTTGTCGAATCTGGCACCGTGGATTATAACTGTCGGAGCTAGTACTCTTGATC 1195
Query 1112 GATTTTTCGTAGGCCGTCTTGAACTTGGTGATGGCTATATATTCGAGTCGGACTC-ATTA 1170
| |||||| ||| |||||| ||||| ||||||||| | || || |||| || || |
Sbjct 1196 GGGCTTTCGTTGGCGGTCTTGTTCTTGGCAATGGCTATACAATCAAGACGGATTCGAT-A 1254
Query 1171 ACAACATT-AAAGATGGACAATTTTGCTCCTCTAGTCTACGCTCCTGACGTGGTTGTTCC 1229
|| |||| ||| |||||||| ||||| ||||| || |||||| || |||||||||||||
Sbjct 1255 ACGGCATTTAAA-ATGGACAAATTTGCCCCTCTTGTTTACGCTTCTAACGTGGTTGTTCC 1313
Query 1230 CGGCGTTTCAAGGAACGACG-CATTGCTATGTTTACCGAATTCACTTTCACCGGATCTTG 1288
|||| || || |||||| | ||| || ||||||||| |||||||| |||||| ||||
Sbjct 1314 CGGCATTGCATTGAACGA-GACATCGCAATGTTTACCAAATTCACTAAAACCGGAGCTTG 1372
Query 1289 TGAGAGGTAAAGTGGTACTA-TGTTTGAGAGGTTACGGTTCAGGTTCAACAATTGGTAAA 1347
|||| ||||||||||| || ||||| ||||| | | | ||||||| ||| ||||||
Sbjct 1373 TGAGTGGTAAAGTGGT-CTTGTGTTTAAGAGG--A-GC--C-GGTTCAAGAATCGGTAAA 1425
Query 1348 GGTATTGAGGTAAAGCGAGCCGGAGGAGTTGGTATGATT 1386
|| || |||||||| ||||| ||||||| |||||||||
Sbjct 1426 GGCATGGAGGTAAAACGAGCTGGAGGAGCCGGTATGATT 1464
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118874890560
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5