BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494436
Length=2776
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45480.1 | Symbols: | Protein of unknown function (DUF594) ... 4163 0.0
AT5G45475.1 | Symbols: | Potential natural antisense gene, loc... 1138 0.0
AT5G45540.1 | Symbols: | Protein of unknown function (DUF594) ... 198 2e-49
> AT5G45480.1 | Symbols: | Protein of unknown function (DUF594)
| chr5:18426104-18429090 REVERSE LENGTH=2987
Length=2987
Score = 4163 bits (2254), Expect = 0.0
Identities = 2629/2806 (94%), Gaps = 41/2806 (1%)
Strand=Plus/Plus
Query 1 CCAACCAGAATAATTCAAACCTTCACACACaa-aaaaa-aataaaaaagcctcaaaagc- 57
|||||||||||||||||||||||||||||||| ||||| | ||||| | |||| |
Sbjct 1 CCAACCAGAATAATTCAAACCTTCACACACAACAAAAAGCCT-CAAAAG-CAAAAAAACT 58
Query 58 aaaaaaaaaaccagaaaaagaaaGAAGTCAAACTCTTTAGATGTATCTGTGTTGGATCTC 117
| | ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 59 CATAGTAAAACCAGAAAAAGAAAGAAGTCAACCTCTTTAGATGTATCTGTGTTAGATCTC 118
Query 118 ATAAGCCTCCATCAGTTCTTGTCTGTTCCAACAAATCAATTTGAAGATGGTGACCGCAAT 177
|||| ||||||||||||||||||| || ||||||| ||| |||||||||| ||||||
Sbjct 119 ATAA---ACCATCAGTTCTTGTCTGTTTCAGCAAATCAGTTTCAAGATGGTGAACGCAAT 175
Query 178 CCCAAAGCCTATCAAGGACATTTGGGACGAATGGAGCATTCGAAGTACCTTAATCTTCAG 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 CCCAAAGCCTATCAAGGACATTTGGGACGAATGGAGCATTCGAAGTACCTTAATCTTCAG 235
Query 238 TCTCAGCCTTCAAACATTTCTCATTTTCTTTGCACCTCAAAGAAAACGCTCATCCAAAAA 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 236 TCTCAGCCTTCAAACATTTCTCATTTTCTTTGCACCTCAAAGAAAACGCTCATCCAGAAA 295
Query 298 AGCTTTACTCT-TTCTCATTTGGTCAGCTTACCTTCTTGCTGATTGGTCGGCCAATTTCG 356
|| |||||||| || |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 296 AGTTTTACTCTCTT-TCATTTGGTCAGCTTACCTTCTTGCTGATTGGTCTGCCAATTTCG 354
Query 357 CCGCCGGACAAATCTCAGACAGTCAAGGAAATGATCCAAAACCCGGAGACCCGAAAAAGA 416
||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||
Sbjct 355 CCGCCGGACAAATCTCAGATAGTCAAGGAGATGATCCAGAACCCGGAGAACCGAAAAAGA 414
Query 417 GCGCCGAATTGTTTGCTTTCTGGGTTCCTTTCTTGCTCTTGCATCTCGGTGGTCCAGATA 476
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 GCGCCGAGTTGTTTGCTTTCTGGGTTCCTTTCTTGCTCTTGCATCTCGGTGGTCCAGATA 474
Query 477 CAATCACTGCCCTTGCCCTTGAAGATAACGAGCTATGGCTCAGGCACTTGTTGGGTCTTT 536
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 475 CAATCACTGCCCTTGCCCTTGAAGATAACGAGCTCTGGCTCAGGCACTTGTTGGGTCTTT 534
Query 537 TCTTTCAATCCGTTGCAACCGTTTACGTGCTTTTGCAATCGCTACCCAATGCTCTTTGGA 596
|||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 535 TCTTTCAATCAGTTGCAACCGTTTACGTGCTTTTGCAGTCGTTACCCAATGCTCTTTGGA 594
Query 597 AAGCC-ACTTTGCTGGTGTTTGCGACCGGAGTGATCAAGTATGTCGAGAGGACATTAGCT 655
|| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 595 AA-CCTATTTTGCTGGTGTTTGCGACCGGGGTGATCAAGTATGTCGAGAGGACATTAGCT 653
Query 656 TTGTACCTGGCGAGTCTTGACAAGTTCAAGGATTCCATGATTCAGCGGCCTGATCCTGGA 715
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 654 TTGTACCTGGCGAGTCTTGACAAGTTCAAAGATTCCATGATTCAGCGGCCTGATCCTGGA 713
Query 716 CCAAACTACGCGAAGCTCATGGAGGAATACGCAGCCAAGAAAGATATGAAGATGCCTACA 775
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 CCAAACTACGCAAAGCTCATGGAGGAATACGCAGCCAAGAAAGATATGAAGATGCCTACA 773
Query 776 CAGATTATCAAGATTGGAGAGCCTGAGCAAGATCCAAAAG-CCAGTGCTCAGGT-CAG-- 831
|||||||||||| |||| ||||||||| ||||||||| || | | ||||| ||| ||
Sbjct 774 CAGATTATCAAGGTTGGCGAGCCTGAGAAAGATCCAAGAGACGA-TGCTCCGGTAAAGCC 832
Query 832 GCCTGAAAAGCTGACTCCACTCAATATTCTCCAGTACGCCTATAAGTACTTCAATATCTT 891
||||| | | ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 833 TCCTGACGGGTTCACTCCACTCAATATTCTCCAGTACGCCTACAAGTACTTTAATATCTT 892
Query 892 TAAAGGTCTTGTGGTTGATCTCATCTTTACATTTCAACAACGAGCTGAGAGCAAGAGATT 951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 CAAAGGTCTTGTGGTTGATCTCATCTTTACATTTCAACAACGAGCTGAGAGCAAGAGATT 952
Query 952 CTTTGACTCGCTGGAAGCACATGAAGCTTTAAGAATCTTAGAGGTTGAGCTCAACTTTAT 1011
||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 953 CTTTGACTCGCTGAAAGCAGAAGAAGCTTTAAGAATCTTAGAGGTTGAGCTCAACTTTAT 1012
Query 1012 CTACGCAGCTCTGTACACGAAAGCCGAGATCTTGCATAATTGGATAGGATTCATCTTCAG 1071
|||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||
Sbjct 1013 CTACGCAGCTCTATACACGAAAGCCGAGATCTTGCACAACTGGATAGGATTCCTCTTCAG 1072
Query 1072 GTTCATTGCCCTGGGATGCCTTATAGCAGCTCTACGCATCTTTCAATACAAGAGCAAGAA 1131
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1073 GTTCATTGCCCTGGGATGCCTTGCAGCAGCTCTACGCATCTTTCAATACAAGAGCAAGAA 1132
Query 1132 AGATTATAGCGGATTTGATGTTGGCCTTACTTACGCATTGCTGTTAGGAGGAATAGCTCT 1191
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 AGATTATAGTGGATTTGATGTTGGCCTTACTTACGCATTGCTGTTAGGAGGAATAGCTCT 1192
Query 1192 GGATTCCATCGCCCTTATCATGTTCTGTGCATCTGATTGGACGTTTGTCAGATTGAGGAA 1251
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 GGATTGCATCGCTCTTATCATGTTCTGTGCATCTGATTGGACGTTTGTCAGATTGAGGAA 1252
Query 1252 GATGAAGGACGAGGTGGACGATCCAGACACCTGGTCCGACCACATTCTTAACTGGATTCT 1311
|||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1253 GATGAAGGACGAAGTGGACGATCCACCCACCTGGTCCGACAACATTCTTAACTGGATTCT 1312
Query 1312 T-AACAACATTCTCGGGGTCAGGGAGTTGAAGACGGAGGAATATGATAAATGCTACAAGA 1370
| || |||||||||||||||||| | |||||| |||||| |||||| ||||||||||||
Sbjct 1313 TGAA-AACATTCTCGGGGTCAGGAAATTGAAGGTGGAGGAGTATGATGAATGCTACAAGA 1371
Query 1371 AGACACTGTCTCATGAAGTGCCCGGCACGAGTACCAAGAAAACACCGTTTCTT---A--A 1425
| |||| |||||||||||||||| ||||||||| ||||||||||| |||||| | |
Sbjct 1372 ATACACAGTCTCATGAAGTGCCCAACACGAGTACTAAGAAAACACCATTTCTTAAAAGGA 1431
Query 1426 --C-T----GGATTCTCGGGGTCAGGAAGTTGAAGACAGAGAAGTCTCATGAAGTTCTCG 1478
| | |||||||| |||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1432 TTCTTAACAGGATTCTCAGGGTGAGGGAGTTGAAGACAGAGAAGTCTCATGAAGTTCTCG 1491
Query 1479 ACAAGAGTACCAGCAAAATAACAGGTCATGAAGTGCCCGACAAGAGTGCCAAGAAAATAC 1538
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||
Sbjct 1492 ACAAGAGTACCAGCAAAATACCAGGTCAGGAAGTGCCCGACAAGAGTGCCAAGACAATAC 1551
Query 1539 CATGTCATAGAGTACTCGACACGAGTTTCATGTATCGCAGGTGGTCTGAGTATGTACATG 1598
||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1552 CATGTCATAAAGTGCTCGACACGAGTTTCATGTATCGCCGGTGGTCTGAGTATGTACATG 1611
Query 1599 CACACAACCTGATCGAATACTGCTTATGTTTAAAACCGAAGCGAATCCACCATACCAAGG 1658
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1612 CACACAACCTGATCGAATACTGCCTAGGTTTAAAACCGAAGCGAATCCACCATACCAAGG 1671
Query 1659 GTTTGATACACATCGCCTTTGACAAGCTTATCAACATCCTTTACATTGGCCCCGCATTCA 1718
|||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1672 GTTTCATACACATCGCCTTTGACAAGGTTATCAACATACTTTACATTGGCCCCGCATTCA 1731
Query 1719 CAAAATTTGTAAGTGTCATTCAATCCTGTTTTAGAGTCACAAAAAAGACAATTCATCAGA 1778
||||| ||| |||||||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct 1732 CAAAACTTGGAAGTGTCATTGAATCCTGTTTTAGAGTCACAAAACAGAGAATTCATCAGA 1791
Query 1779 CTTTCAAGTGGATTGACGGTAAAATAAGTCGCTTCTGCAAG-AATCACCCGAAGTTGAAT 1837
||||||||||||||||||||||| ||||||| || |||||| ||| ||||||||||||||
Sbjct 1792 CTTTCAAGTGGATTGACGGTAAAGTAAGTCGTTTATGCAAGAAAT-ACCCGAAGTTGAAT 1850
Query 1838 GAAGAGTACATTAGGTTAAGCTTCTTCTGCATATTTTACATTCCTAGTCTACCTGGACGC 1897
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GAAGAGTACATTAGGTTTAGCTTCTTCTGCATATTTTACATTCCTAGTCTACCTGGACGC 1910
Query 1898 -GCGATAAAAAGATTTATGGAGTTCTTTGGCATTCGAGCTCAGCTAGATGAGGTGTTCTA 1956
| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1911 TG-GATAAAAAGTTTTATGGAGTTCTTTGGCATCCGAGCTCAGCTAGATGAGGTGATCTA 1969
Query 1957 CACATCCAGTGATCGCCTCACCCTGGATATGTGGGAACACATATTCAGAGAGGTTAAAGC 2016
|||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1970 CACATCTAGTGATCGTCTCACCCTGGATATGTGGGAACACATATTCGGAGAGGTTAAAGC 2029
Query 2017 CAAATCCCGTTTTGCTGACGACTCTGAAAGCGCCATGAGGGTATCTTCAGCTAGAGGTGA 2076
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2030 CAAATCCCGTTTCGCTGACGACTCTGAAAGCGCCATGAGGGTATCTTCAGCAAGAGGTGA 2089
Query 2077 CTGGACTCTGCGCGACATACAAGGTGACCCAGAAACAGaaaaaaaaCGTGATAAACTTCT 2136
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2090 CTGGACACTGCGCGACATACAAGGTGACCCAGAAACAGAAAAAAAACGTGAGAAACTTCT 2149
Query 2137 ACGCTATGTGATGGAAATGGATTATGATCAGAGCCTTCTTGTATGGCATATTGCCACTGA 2196
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2150 ACGCTATGTGATGGAAATGGATTACGATCAGAGCCTTCTTGTATGGCATATAGCCACTGA 2209
Query 2197 GCTCTTATACCAGACAGAAGAAGGCACTGAAGCGAATCATAGCAACCGTGAGTACAGTAA 2256
|||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct 2210 GCTCTTATACCAGACAAAAAAAGGCACTAAAGCGAATCATAGCGCCCGTGAGTTCAGTAA 2269
Query 2257 AATTCTCTCAGACTACATGATGTACCTCCTAATGATGCAACCCACTCTGATGTCAGCTGT 2316
||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2270 AATCCTGTCAGACTACATGATGTATCTCCTAATGATGCAACCCACTCTGATGTCAGCTGT 2329
Query 2317 TGTGGGTATTGGAAAGATAAGATTCAGAGACACATGCGAGGAGGCTCAGAGGTTCTTCGA 2376
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2330 TGTGGGTATTGGAAAGATAAGATTCAGAGACACGTGCGAGGAGGCTCAGAGGTTCTTCGA 2389
Query 2377 TAGGAGGCATATCATGGGGATATCCGCAAAGAAGGCCCC---T---AAGGAAGCCAGCGA 2430
||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 2390 TAGGAGGCATATCATGGGGATATCCGCAAAGAAGGCCCCTGATGCAAAGGAAGCCAGCGT 2449
Query 2431 CGCAATTTTATCTGTGGCTGTTCCAGCAAAAGCTGAGCCCATTGACGTGAAAGGAGATAG 2490
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2450 GGCAATTTTATCAGTGGCAGTTCCAGCAAAAGCTGAGCCCATTGACGTGAAAGGAGATAG 2509
Query 2491 AAGCAAATCCGTCCTGTTTGATGGGGCCATGCTGGCGAAAGAGCTTAAGGGTTTAAGCAA 2550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2510 AAGCAAATCCGTCCTGTTTGATGGGGCCATGCTGGCGAAAGAGCTTAAGGGTTTAAGAAA 2569
Query 2551 GAACAAGGAGAACAACACAGAGATGTGGGAAATAGTGAGCAAAGTGTGGGTTGAGTTGCT 2610
||| |||||| || || ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 2570 GAATAAGGAGGACGACTCAGAGATGTGGAAAATAATGAGCCAAGTGTGGGTTGAGTTGCT 2629
Query 2611 TTCTTATGCAGCGACAAAGTGTGGCGCTATAGAACACGCAGCTCAGCTAAGCAAAGGAGG 2670
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2630 TTCGTATGCAGCGACAAAGTGTGGCGCTATAGAACACGCAGCTCAGCTAAGCAAAGGAGG 2689
Query 2671 AGAACTCATAAGCTTTGTTTGGCTATTGATGGCTCATTTTGGACTAGGAGACCAATTCCA 2730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2690 AGAACTCATAAGCTTTGTTTGGCTATTGATGGCTCATTTTGGACTAGGAGACCAATTCCA 2749
Query 2731 AATCAACCAAGGAGATGCCAGAGCCAAACTGATTATAGGCAAGTGA 2776
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2750 AATCAACCAAGGAGATGCCAGAGCCAAACTGATTATAGGCAAGTGA 2795
> AT5G45475.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT5G45480 | chr5:18425837-18427016 FORWARD
LENGTH=1054
Length=1054
Score = 1138 bits (616), Expect = 0.0
Identities = 687/721 (95%), Gaps = 6/721 (1%)
Strand=Plus/Minus
Query 2062 TTCAGCTAGAGGTGACTGGACTCTGCGCGACATACAAGGTGACCCAGAAACAGaaaaaaa 2121
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1054 TTCAGCAAGAGGTGACTGGACACTGCGCGACATACAAGGTGACCCAGAAACAGAAAAAAA 995
Query 2122 aCGTGATAAACTTCTACGCTATGTGATGGAAATGGATTATGATCAGAGCCTTCTTGTATG 2181
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 994 ACGTGAGAAACTTCTACGCTATGTGATGGAAATGGATTACGATCAGAGCCTTCTTGTATG 935
Query 2182 GCATATTGCCACTGAGCTCTTATACCAGACAGAAGAAGGCACTGAAGCGAATCATAGCAA 2241
|||||| |||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 934 GCATATAGCCACTGAGCTCTTATACCAGACAAAAAAAGGCACTAAAGCGAATCATAGCGC 875
Query 2242 CCGTGAGTACAGTAAAATTCTCTCAGACTACATGATGTACCTCCTAATGATGCAACCCAC 2301
|||||||| ||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 874 CCGTGAGTTCAGTAAAATCCTGTCAGACTACATGATGTATCTCCTAATGATGCAACCCAC 815
Query 2302 TCTGATGTCAGCTGTTGTGGGTATTGGAAAGATAAGATTCAGAGACACATGCGAGGAGGC 2361
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 814 TCTGATGTCAGCTGTTGTGGGTATTGGAAAGATAAGATTCAGAGACACGTGCGAGGAGGC 755
Query 2362 TCAGAGGTTCTTCGATAGGAGGCATATCATGGGGATATCCGCAAAGAAGGCCCC---T-- 2416
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 754 TCAGAGGTTCTTCGATAGGAGGCATATCATGGGGATATCCGCAAAGAAGGCCCCTGATGC 695
Query 2417 -AAGGAAGCCAGCGACGCAATTTTATCTGTGGCTGTTCCAGCAAAAGCTGAGCCCATTGA 2475
||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 694 AAAGGAAGCCAGCGTGGCAATTTTATCAGTGGCAGTTCCAGCAAAAGCTGAGCCCATTGA 635
Query 2476 CGTGAAAGGAGATAGAAGCAAATCCGTCCTGTTTGATGGGGCCATGCTGGCGAAAGAGCT 2535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 634 CGTGAAAGGAGATAGAAGCAAATCCGTCCTGTTTGATGGGGCCATGCTGGCGAAAGAGCT 575
Query 2536 TAAGGGTTTAAGCAAGAACAAGGAGAACAACACAGAGATGTGGGAAATAGTGAGCAAAGT 2595
|||||||||||| ||||| |||||| || || ||||||||||| ||||| ||||| ||||
Sbjct 574 TAAGGGTTTAAGAAAGAATAAGGAGGACGACTCAGAGATGTGGAAAATAATGAGCCAAGT 515
Query 2596 GTGGGTTGAGTTGCTTTCTTATGCAGCGACAAAGTGTGGCGCTATAGAACACGCAGCTCA 2655
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 514 GTGGGTTGAGTTGCTTTCGTATGCAGCGACAAAGTGTGGCGCTATAGAACACGCAGCTCA 455
Query 2656 GCTAAGCAAAGGAGGAGAACTCATAAGCTTTGTTTGGCTATTGATGGCTCATTTTGGACT 2715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 454 GCTAAGCAAAGGAGGAGAACTCATAAGCTTTGTTTGGCTATTGATGGCTCATTTTGGACT 395
Query 2716 AGGAGACCAATTCCAAATCAACCAAGGAGATGCCAGAGCCAAACTGATTATAGGCAAGTG 2775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 394 AGGAGACCAATTCCAAATCAACCAAGGAGATGCCAGAGCCAAACTGATTATAGGCAAGTG 335
Query 2776 A 2776
|
Sbjct 334 A 334
> AT5G45540.1 | Symbols: | Protein of unknown function (DUF594)
| chr5:18458154-18460821 REVERSE LENGTH=2668
Length=2668
Score = 198 bits (107), Expect = 2e-49
Identities = 417/555 (75%), Gaps = 67/555 (12%)
Strand=Plus/Plus
Query 2230 GAATCATAGCAACCGTGAGTACAGTAAAATTCTCTCAGACTACATGATGTACCTCCTAAT 2289
||| || || ||||| |||| ||| ||||| || || |||||||||||||||||||| ||
Sbjct 2001 GAA-CACAGTAACCGAGAGTTCAGCAAAATCCTTTCGGACTACATGATGTACCTCCTTAT 2059
Query 2290 GA-TGCAACCCACTCTGATGTCAGCTGTTGT-GGGTATTGGAAAGATAAGATTCAGAGAC 2347
| |||| || |||||||||||||||||| | || || | ||||||| | |||||||||
Sbjct 2060 -AGTGCAGCCAACTCTGATGTCAGCTGTT-TCCGGAATCGCAAAGATACGTTTCAGAGAC 2117
Query 2348 ACATGCGAGGAGGCTCAGAGG--TTCTTCGATAGGAGGCATAT---C--ATGGGGATATC 2400
|||||||| |||| || ||| || ||| | ||||| ||| | | || |||||
Sbjct 2118 ACATGCGAAGAGG--CAAAGGACTTTTTCCAGAGGAGACATGTCGACAAATCAAGATAT- 2174
Query 2401 CG-CAAAGAAGGCC-CCT-AAGGAAGCCA-G-CGACGCAATTTTATCTGTGGCTGTTCCA 2455
| ||| || || | | || |||| || | ||| || ||| | ||||| | ||
Sbjct 2175 -GTAAAAAAAAACCTCATGAAAGAAG-CATGTCGA-GCTATTCTCTCTGT--C---AACA 2226
Query 2456 GCA-AAAGCTGAGCCCATTGAC-GTGAAAGGAGATAGAAGCAAATCCGTCCTGTTT-GAT 2512
|| ||| | || ||| || | ||||||||||| |||||||||||||| || ||| |||
Sbjct 2227 -CAGAAATC-GA-TCCAATGGCTGTGAAAGGAGACAGAAGCAAATCCGTGCT-TTTCGAT 2282
Query 2513 G-GGGCCATGCTGGCGAAAGAGCTTAAGGGTTTAAGCAAGAACAAGGAGAACAACACAGA 2571
| | | |||| || ||||||| ||| | | | | |||| | | || ||
Sbjct 2283 GCAAG-CGTGCTCGCAAAAGAGC-TAA-----T--G--A-ATGAAGGTG-A-AA-AC--- 2324
Query 2572 GATGTGGGAAATAGTGAGCAAAGTGTGGGTTGAGTTGCTTT-CTTATGCAGCGACAA-AG 2629
||||||||| |||||||||||||||||||||||||||||| || ||||| | || |
Sbjct 2325 -ATGTGGGAAGTAGTGAGCAAAGTGTGGGTTGAGTTGCTTTGCT-ATGCATC-ACTTCAT 2381
Query 2630 TGTGGCGCT-ATAGAACACGCAGCTCAGCTAAGCAAAGGAGGAGAACTCAT-AAGCTTTG 2687
|||| | || | |||||| || |||| || |||||||| || ||||| || || |||||
Sbjct 2382 TGTGACTCTCA-AGAACATGCTTCTCAACTTAGCAAAGGCGGTGAACTTATCAA-CTTTG 2439
Query 2688 TTTGGCTATTGATGGCTCATTTTGGACTAGGAGACCAATTCCAAATCAACCA-AGGA-GA 2745
|||||||||| ||||||||||||||||| ||||| ||||||||||||||| | || | ||
Sbjct 2440 TTTGGCTATTAATGGCTCATTTTGGACTCGGAGATCAATTCCAAATCAAC-AGAG-ATGA 2497
Query 2746 TGCCAGAGCCAAACT 2760
||| |||||||||||
Sbjct 2498 TGCAAGAGCCAAACT 2512
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137908926307
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5