BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494437
Length=2886
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45460.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 2708 0.0
AT5G45470.1 | Symbols: | Protein of unknown function (DUF594) ... 2050 0.0
AT5G45472.1 | Symbols: | Potential natural antisense gene, loc... 1406 0.0
> AT5G45460.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF594)
(TAIR:AT5G45470.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink). | chr5:18416614-18419481 REVERSE
LENGTH=2868
Length=2868
Score = 2708 bits (1466), Expect = 0.0
Identities = 2248/2611 (86%), Gaps = 111/2611 (4%)
Strand=Plus/Plus
Query 230 gagaga-AG-GA-AGAAGCTCAATCTTTTTTCCTC-AGAGAGAGCAAAAATGGTGGACGT 285
|||||| || || ||| ||| |||| |||||||| || |||||||||||||||||||||
Sbjct 168 GAGAGACAGAGAGAGAGGCTTTATCTCTTTTCCTCAAGTGAGAGCAAAAATGGTGGACGT 227
Query 286 GATACCAAAACACATCAAAGATGTTTGGGATAGATGGAACATAAGAGGAGCAGTCATTCT 345
|||||||||||| |||||||||| ||||| ||||||||||| |||||| || || ||||
Sbjct 228 GATACCAAAACATATCAAAGATGCGTGGGACAGATGGAACATTAGAGGAACAATCTTTCT 287
Query 346 CAGTCTTACCCTTCAAGCCATTCTCATTTGCTTCTCTCC-TCTAAGGAAACGCACACCAA 404
|||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||
Sbjct 288 AAGTCTTACCCTTCAAGCCTTTCTCATTTGCTTCTCTCCAT-TAAGGAAACGAACACCAA 346
Query 405 GAAGGCTCTTGATCGTGC-TCGTTTGGTCCTCTTATCTCTTAGCAGATTGGTCTGCTAAT 463
|||||| |||||| | | || ||||||||||||||||||||||||||||||||||||||
Sbjct 347 GAAGGCACTTGATTAT-CGTCATTTGGTCCTCTTATCTCTTAGCAGATTGGTCTGCTAAT 405
Query 464 TTCGCTGTTGGTCTCATCTCCAAGAACCAAGGTAAAGATCTCAAACCTGGTGCCCCTCCA 523
|||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||
Sbjct 406 TTCGCTGTTGGTCTCATCTCTAAGAACCAAGGTAAAGATCTCAAACCTGATGACCCTCCA 465
Query 524 CAGGACAAAAAGCTCATGGCTTTATGGGCACCATTCTTGCTTTTGCATCTTGGTGGACCA 583
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 466 CAGGACAAAAAGCTCATGGCTTTATGGGCACCATTCTTGCTCTTACATCTTGGTGGACCA 525
Query 584 GATACAATCACAGCTTTCGCGCTTGAAGATAACGCTCTCTGGCTCCGACATGTCTTTGGG 643
|| || || ||||||||||||||||||||||||||||| ||||||||| |||| ||||||
Sbjct 526 GACACTATAACAGCTTTCGCGCTTGAAGATAACGCTCTTTGGCTCCGAAATGTTTTTGGG 585
Query 644 CTTGTCTTTCAGGCAATTGCTGGTGTCTATGTCGTTCTC-ATGTCTCTCCCCAATAGCCT 702
|||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||||
Sbjct 586 CTTGTCTTTCAGGCAATTGCTGGTGTCTATGTGGTTCTCCA-GTCTCTGCCCAATAGCCT 644
Query 703 TTGGGTGATTATACTCTTAGTGTTCGTTTCTGGGACTATAAAGTATCTGGAGAGGACAAC 762
|||||| | ||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 645 TTGGGTAACAATACTCTTAGTGTTCATTTCTGGGACTATAAAGTATCTGGAAAGGACAAC 704
Query 763 GGCTTTGTATAGTGCCAGTTTGGACAAGTTTAGGGACTCTATGATTCAAGCACCAGATCC 822
||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 705 GGCTTTGTATAGTGCAAGTTTGGACAAGTTTAGGGATTCTATGATTCAAGGACCAGATCC 764
Query 823 AGGACCAAACTACGCCAAGCTCATGGAGGAGTACAAGGCCAAGAAAGAGGCAAGACTACC 882
||||||||| || || |||||||||||||||||||||||||||||||| |||| | ||||
Sbjct 765 AGGACCAAATTATGCGAAGCTCATGGAGGAGTACAAGGCCAAGAAAGAAGCAAAATTACC 824
Query 883 CACCAAGATCATTCTGATTGATGAACCTGACAAAGAAAATAGGCCTAAGAAGTTAGAGCA 942
|||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct 825 CACCAAGATCATTCTGATTGATGAGCCTGACAAGGAACATAGGCCTAAGAAGTTAGAGCA 884
Query 943 TCCATCATTAGCCTCGGACACAAAAAGAAAAGATTTGACTCATCTTGAGATTGCTCAGTA 1002
|||||| | |||||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct 885 TCCATCCCTGGCCTCGGAGACAAAAAGAAAAGAGTTGACTCATCTTGAAATTGCTCAGTA 944
Query 1003 TGCTTACAAATTCTTCAACACATTCAAGGGCCTTGTGGTCAACCTTATCTTCAGCTTCAG 1062
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 945 CGCTTACAAATTCTTCAACACATTCAAGGGCCTTGTAGTCAACCTTATCTTCAGCTTCAG 1004
Query 1063 GGAGCGTGACGAGAGCCTAGAGATCTTTGAGAATTTA-AAGGATTCAGAGGAAGCTTTGA 1121
|||||||||| ||||| ||||||||||| |||| || ||| || ||||||||||||| |
Sbjct 1005 GGAGCGTGACCAGAGCATAGAGATCTTTCAGAACTTGGAAG-ATCCAGAGGAAGCTTTAA 1063
Query 1122 GGATCATTGAAATTGAGCTTGG-TTTCCTTTATGATGCTCTATTCACCAAGATCGCGATT 1180
| |||||||| ||||| || || |||| | || ||||||||||||||||||| |||| ||
Sbjct 1064 GAATCATTGAGATTGAACTCGGCTTTC-TCTACGATGCTCTATTCACCAAGAACGCGGTT 1122
Query 1181 CTTCATACCT-TTATTGG-AACTTTCTCACGCA-TCCTTGCTTCTGGCACCCTGGTGGCT 1237
|||||||| | || |||| |||| ||||||| | | ||||||| || |||| ||||||
Sbjct 1123 CTTCATAC-TGTT-TTGGGAACTGTCTCACG-AGTTGTTGCTTCGGGTTCCCTTGTGGCT 1179
Query 1238 GCATTCATCCTCTTTCATAAGAAACCCAAGAAAGACATACAATTTCATGGTGCTGATGTT 1297
||||||||| |||||||||||| | | || |||| || | | |||||||| || |||||
Sbjct 1180 GCATTCATCATCTTTCATAAGATATCTAACAAAGGCAGAGACTTTCATGGAGCAGATGTC 1239
Query 1298 GTGGTTACCTACACGCTGTTTGCAGTTGGTGTAGTTTTGGATTTCATATCCATCCTTTTG 1357
||| ||||||| | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1240 GTGATTACCTATATTCTGTTTGCAGTTGGCCTAGTTTTGGATTTCATATCCATCCTTTTG 1299
Query 1358 TTTCTGTTCTCAGACTGGACGTGTGCTGCACT-ACGTAGCTTAAAGGACAACCCCGACAA 1416
|||||||||||||||||||| ||||||||||| | ||||||| |||||| | || || |
Sbjct 1300 TTTCTGTTCTCAGACTGGACATGTGCTGCACTTA-GTAGCTTGAAGGACGATCCGGATGA 1358
Query 1417 GGCTCTATCGTCCTCGATAGATAAGGTTTT-CAACTGGTTACTTAGTATA-AGACAGCTG 1474
| ||||||| | || ||||| | |||| |||||| |||||| | || ||| |||||
Sbjct 1359 GCCTCTATCATG---GAAAGATA-GATTTTTCAACTGTTTACTT-GAATTCAGAAAGCTG 1413
Query 1475 CGTTGGAAGACGCAAGAATGCCACGGGAAAGGT-ACGCATAAGTGTACC---GCCTGTCT 1530
|||||||||| |||||| |||||| |||||| | |||||||||||| | ||
Sbjct 1414 CGTTGGAAGATGCAAGAGTGCCACAATAAAGGTGA-GCATAAGTGTACAAAAGAAGGTGA 1472
Query 1531 TAAA------A--AAG-AT--T-ATAAAAAGTGTTCAACAGTGCA-GAAGCATGAGGTGC 1577
||| | ||| | | || | |||||||||| || || | |||| | |||
Sbjct 1473 GAAACCGTGCATCAAGGAAGGTGATGATAAGTGTTCAATGGTACACGT-GCATCACATGC 1531
Query 1578 TCTCGACGCCATTCTTCTTCCGGAGGTGGTGTGGAAGCATCAATGTATTCAACTTTTTAG 1637
|| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1532 TCACGACGCCATTCTTCTTCCGGAGGTGGTGTGGAAGCATCAACGTATTCAACTTTCTAG 1591
Query 1638 CGTATGCCACAAAAGCAGAAGT-AAATC-GGATCCACGATGCTAGA-A-GTAGTTTCCGC 1693
| |||||||||||| | ||| ||| ||||||||||||| || | | |||| ||||
Sbjct 1592 CATATGCCACAAAAA-A-AAGACAAAAGAGGATCCACGATGCCGGAGATG-AGTT-CCGC 1647
Query 1694 -CGCTACTCATGGAAGATCATAGCTTTCCCATTCGAAA-AACTCAA-CTTAATCATCCA- 1749
| || | ||||| |||||||||||||| ||| ||| || |||| || | | |||||
Sbjct 1648 TC-CT--T-ATGGATCATCATAGCTTTCCCGTTCAAAATAA-TCAATCTCA-TAATCCAG 1701
Query 1750 AACACTTCGACGATGGATTGTCAATTTCATCAATGATGTTCACA-AGTGGATCAGCCA-C 1807
|| | || |||| |||||| | | |||||| |||| |||| | |||||| || | |
Sbjct 1702 AA-AGTTTTTGGATGTATTGTCGAGGTGATCAATAATGTGCACAGA-TGGATCCGC-AGC 1758
Query 1808 AAAGTCAATGCATTATCAAGAAAATCTTCTTTTG-CTCGTCGTTGGATTTACCCTATCTA 1866
| ||||||| | ||||||||||| | | || | ||||| || ||||||||| ||||
Sbjct 1759 ATAGTCAATACGTTATCAAGAAAC-CACCCTTGGGCTCGTTGTACTATTTACCCTCTCTA 1817
Query 1867 CT-TCAA-GTTCATATCCCGCATCCCTCATTTCATCAAATCTGTGTGGGATATCCTCAGT 1924
| | | |||| ||| || ||||||| |||||||||||| | ||||| || | |||| |
Sbjct 1818 -TAT-ATTGTTCCTATTCCACATCCCTAATTTCATCAAATATTTGTGGAATGTTCTCATT 1875
Query 1925 GAGTTCTTTGACATCTCGGATACGCTTGATATGGTCCACAAGACGCTATTTGTACACGGA 1984
|||||||| | |||| ||||| |||||||| ||||| | |||||| ||||||||||||||
Sbjct 1876 GAGTTCTTAGGCATCCCGGATGCGCTTGATCTGGTCGAGAAGACGTTATTTGTACACGGA 1935
Query 1985 GAGCCCATGACGAAAGAATTGTGGAAGTTCATCTTCGAAGAGCTGAGAAACAAATCAAAG 2044
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1936 GAGCCCATGACAAAAGAATTGTGGAAGTTCATCTTCGAAGAGCTGAAAAACAAATCAAAG 1995
Query 2045 TATGGAGACAGTCCTGAAAATGCCAAGAGGATATCTTTGGCTCGGGGAGAATGGACTTTA 2104
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct 1996 TATGGAGACAGTCCTGAAAATGCCAAAAGGATATCTTTGGCTAGGGGAGAATGGGCTTTA 2055
Query 2105 AGAGAGAACCTGCCGGAGGATGCTGAACGTGAAAAAATGGTACGTTATGTCACAAAGGTC 2164
|| || ||||| || |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 2056 AGGGACAACCTACCAGAGGATGCAGAACGTGAAAAACTGGTACGTTATGTCACAAAGGTC 2115
Query 2165 GATTATGATCAGAGTCTTTTGATGTGGCACATCGCAACTGAGCTCTGTTACCAACAACAT 2224
|||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||
Sbjct 2116 GATTATGATCAGAGTCTTTTGATGTGGCACATCGCAACCGAGTTCTGCTACCAAGAACAT 2175
Query 2225 GAGGAAGAGACTATCCCAGAGGGCTATGATGAACAATGCAAGCATTACAGTAACCGCGAG 2284
|| ||||||||||||||||||| |||||||||||||||||||| | | |
Sbjct 2176 AAGAAAGAGACTATCCCAGAGGGTTATGATGAACAATGCAAGCA--A-A--A-------- 2222
Query 2285 TTCAGCAAAATCATCTCAGACTACATGATGTATCTCCTGATCTTGCAACCCGGTCTGATG 2344
| || || || |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2223 T-CA------TC-TC--AGACTACATGATGTATCTCCTGATCTTGCAACCCAGTCTGATG 2272
Query 2345 TCCGAGGTTGCTGGAATTGGGAAGATCAGATTCAGAGACACATTGGCTGAAGCTGACAAG 2404
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 2273 TCCGAGGTTGCTGGAATTGGGAAGATCAGATTCAGAGACACATTGGCGGAAACTGACAAG 2332
Query 2405 TTTTTCCAGAGGAGGC-ATATCGAGGACAAGAGAAGCGTGAAGATAGCCACCATAA-ATA 2462
|||||| |||||| | | ||| | | | | | ||||||| ||||||| | | |||
Sbjct 2333 TTTTTCGAGAGGAAACGA-ATCTAT-A-ATGTGG-GCGTGAATTTAGCCAC-AGAGTATA 2387
Query 2463 TTCTAGACGTCGAA-AGTGAAATTGAACCAATGGACGTGAAGGGAGATCGAAGCAAGTCT 2521
| || || ||| || ||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 2388 TACTGGATGTC-AATAGTGAAATTGAACCAGTGGACGTCAAGGGAGATCGAAGCAAGTCA 2446
Query 2522 GTGTTGTTTGACGCGAGTAGGCTAGCCAAAGACCTTGCGGAG-ATGGAGAAGACGCAGAA 2580
||||||||||| ||||| |||||||||||||||||| | || ||||||||||| || ||
Sbjct 2447 GTGTTGTTTGATGCGAGCAGGCTAGCCAAAGACCTTACA-AGGATGGAGAAGACACACAA 2505
Query 2581 GAAAGACAAATGGGAGATACTGAGTAAAGTGTGGGTGGAACTTCTCTGTTATGCAGCTTG 2640
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2506 CAAAGATAAATGGGAGATACTGAGTAAAGTGTGGGTGGAGCTTCTCTGTTATGCAGCTTG 2565
Query 2641 TCATTGCGACGCTACGGCTCACGTGGAGCAACTCAGCAGAGGAGGTGAGCTCATAAACTT 2700
|||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 2566 TCATTGCGACTCTACGGCTCACGTGGAGCAACTCAGCAGAGGCGGTGAGCTTATAAACTT 2625
Query 2701 CGTGTGGCTTCTAATGGCTCACTTTGGACTAACAGATCAGTTCCAGATCAACAAAGGAGA 2760
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 2626 TGTGTGGCTTCTAATGGCTCACTTTGGACTAACAAATCAGTTCCAAATCAACAAAGGAGA 2685
Query 2761 TGCCAGAGCCAAACTCATAATAGGCAAGTGA 2791
|||||||||||||||||| ||||||||||||
Sbjct 2686 TGCCAGAGCCAAACTCATCATAGGCAAGTGA 2716
Score = 111 bits (60), Expect = 3e-23
Identities = 74/80 (93%), Gaps = 4/80 (5%)
Strand=Plus/Plus
Query 70 aaaaa-aaGAACAACATCAATGGCTTCCCAAAAACATT-CCACAAACCCCAAAGTTTTCA 127
||||| || ||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 59 AAAAACAACAACAACATCAATGGCTTCCCAAAAACATTGCC-CAAACCCCAAAGTTCTCA 117
Query 128 AGTAAATCTGAGaaa-aaaa 146
||||||||||||||| ||||
Sbjct 118 AGTAAATCTGAGAAAGAAAA 137
> AT5G45470.1 | Symbols: | Protein of unknown function (DUF594)
| chr5:18421985-18425042 REVERSE LENGTH=3058
Length=3058
Score = 2050 bits (1110), Expect = 0.0
Identities = 1401/1538 (91%), Gaps = 34/1538 (2%)
Strand=Plus/Plus
Query 1 TACCTGAGTTGCTGAGTCGTCTTTCTTCTTCTTCCCCCAGT--GAGCTTCTGGTaaaaaa 58
|||||||||||| ||||||||||||||| || | ||||| |||||||||||||||||
Sbjct 4 TACCTGAGTTGCAGAGTCGTCTTTCTTC-TC--GCTCCAGTGAGAGCTTCTGGTAAAAAA 60
Query 59 a-aaatatatacaa-aaaaaGAACAACATCAATGGCTTCCCAAAAACATTCCACAAACCC 116
| ||| | | | || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 61 AGAAA-AGA-A-AAGAAAAAGAACAACATCAATGGCGTCCCAAAAACATTCCACAAACCC 117
Query 117 CAAAGTTTTCAAGTAAATCTGA-G--aaaaaaaTATCTCAATAACCAGAagagagagaga 173
|||| ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 118 CAAACTTTTCAAGTAAATCTGAGGAAAAAAAAACATCTCAATAACCAGAAGAGAGAGAGA 177
Query 174 gagagaaaaaaagaaagaaccacaaatttctctagtgaatccaagagagagaaagagaga 233
|||| |||||||||||||| | |||||||||| ||| |||||||||||||| || |||||
Sbjct 178 GAGAAAAAAAAAGAAAGAAACTCAAATTTCTCAAGTAAATCCAAGAGAGAG-AA-AGAGA 235
Query 234 gaAGGAAGAAGCTCAATCTTTTTTCCTC--AGAGAGAGCAAAAATGGTGGACGTGATACC 291
||||||| ||| || ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 236 GAAGGAAAAAGATCTATCTTTTTTCCTCTGAGAGAGAGCAAAAATGGTGGAAGTGATACC 295
Query 292 AAAACACATCAAAGATGTTTGGGATAGATGGAACATAAGAGGAGCAGTCATTCTCAGTCT 351
|||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 296 AAAACATATCAAAGATGTTTGGGATAGGTGGAACATAAGAGGAGCAGTCATTCTAAGTCT 355
Query 352 TACCCTTCAAGCCATTCTCATTTGCTTCTCTCCTCTAAGGAAACGCACACCAAGAAGGCT 411
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 356 TACCCTTCAAGCCATTCTCATTTGCTTCTCTCCTCTAAGGAAACGTACACCAAGAAGGCT 415
Query 412 CTTGATCGTGCTCGTTTGGTCCTCTTATCTCTTAGCAGATTGGTCTGCTAATTTCGCTGT 471
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CTTGATCGTGCTTGTTTGGTCCTCTTATCTCTTAGCAGATTGGTCTGCTAATTTCGCTGT 475
Query 472 TGGTCTCATCTCCAAGAACCAAGGTAAAGATCTCAAACCTGGTGCCCCTCCACAGGACAA 531
|||||| ||||||||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct 476 TGGTCTTATCTCCAAGAATCAAGGTAAAGATCTCAAACCTGATGACCCTCCACAGGACAA 535
Query 532 AAAGCTCATGGCTTTATGGGCACCATTCTTGCTTTTGCATCTTGGTGGACCAGATACAAT 591
|||| | |||||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 536 AAAGGTAATGGCTTTATGGGCACCATTCTTGCTCTTGCATCTTGGTGGACCAGACACTAT 595
Query 592 CACAGCTTTCGCGCTTGAAGATAACGCTCTCTGGCTCCGACATGTCTTTGGGCTTGTCTT 651
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 596 CACAGCTTTCGCGCTTGAAGATAACGCTCTCTGGCTACGACATGTCTTTGGGCTTGTCTT 655
Query 652 TCAGGCAATTGCTGGTGTCTATGTCGTTCTCATGTCTCTCCCCAATAGCCTTTGGGTGAT 711
|||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |
Sbjct 656 TCAGGCAATTGCTGGTGTCTATGTGGTTGTCATGTCTCTGCCCAATAGCCTTTGGGTGGT 715
Query 712 TATACTCTTAGTGTTCGTTTCTGGGACTATAAAGTATCTGGAGAGGACAACGGCTTTGTA 771
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 716 TATAGTCTTAGTGTTTGTTTCTGGGACTATAAAGTATCTGGAGAGGACAACGGCTCTGTA 775
Query 772 TAGTGCCAGTTTGGACAAGTTTAGGGACTCTATGATTCAAGCACCAGATCCAGGACCAAA 831
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TAGTGCAAGTTTGGACAAGTTTAGGGACTCTATGATTCAAGCACCAGATCCAGGACCAAA 835
Query 832 CTACGCCAAGCTCATGGAGGAGTACAAGGCCAAGAAAGAGGCAAGACTACCCACCAAGAT 891
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 836 CTACGCCAAGCTCATGGAGGAGTACAAGGCCAAGAAAGAGGCAAGACTTCCCACCAAGAT 895
Query 892 CATTCTGATTGATGAACCTGACAAAGAAAATAGGCCTAAGAAGTTAGAGCATCCATCATT 951
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 896 CGTTCTGATTGATGAGCCTGACAAAGAAAATAGGCCTAAGAAGTTAGAGCATCCAGCATT 955
Query 952 AGCCTCGGACACAAA-AAGAAAAGATTTGACTC-ATCTTGAGATTGCTCAGTATGCTTAC 1009
||| ||| | | ||| || |||||||||||| | |||||||||||| |||||||||||||
Sbjct 956 AGCTTCGAAGA-AAAGAAAAAAAGATTTGAC-CGATCTTGAGATTGTTCAGTATGCTTAC 1013
Query 1010 AAATTCTTCAACACATTCAAGGGCCTTGTGGTCAACCTTATCTTCAGCTTCAGGGAGCGT 1069
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1014 AAATTCTTCAACACATTCAAGGGCCTTGTAGTCAACCTTATCTTCAGCTTCAGGGAGCGT 1073
Query 1070 GACGAGAGCCTAGAGATCTTTGAGAATTTAAAGGATTCAGAGGAAGCTTTGAGGATCATT 1129
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 1074 GACGAGAGCCTAGAGATCTTTGAGAATTTAAATGATCCAGAGGAAGCTTTGAGGATCATT 1133
Query 1130 GAAATTGAGCTTGG-TTTCCTTTATGATGCTCTATTCACCAAGATCGCGATTCTTCATAC 1188
|| |||||||| || |||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1134 GAGATTGAGCTCGGCTTTC-TCTATGATGCTCTATTCACCAAGATCGCGATTCTTCATAC 1192
Query 1189 CTTTATTGGAACTTTCTCACGCATCCTTGCTTCTGGCACCCTGGTGGCTGCATTCATCCT 1248
| |||||||||| ||||||| || |||||||||| ||||| ||||||||||||||| |
Sbjct 1193 CGGTATTGGAACTGTCTCACGGGTCTTTGCTTCTGGTACCCTTGTGGCTGCATTCATCAT 1252
Query 1249 CTTTCATAAGAAACCCAAGAAAGACATACAATTTCATGGTGCTGATGTTGTGGTTACCTA 1308
|||||||||||||| || |||| || | | |||||||| |||||||| || ||||| ||
Sbjct 1253 TTTTCATAAGAAACCTAACAAAGGCACAGATTTTCATGGAGCTGATGTCGTAGTTACTTA 1312
Query 1309 CACGCTGTTTGCAGTTGGTGTAGTTTTGGATTTCATATCCATCCTTTTGTTTCTGTTCTC 1368
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1313 TACGCTGTTTGCAGTTGGCCTAGTTTTGGATTTCATATCCATCCTTTTGTTCCTGTTCTC 1372
Query 1369 AGACTGGACGTGTGCTGCACTAC-GTAGCTTAAAGGACAACCCCGACAAGGCT-CTATCG 1426
||||||||| ||||||||| ||| |||| || |||||| | || || || || | |||
Sbjct 1373 AGACTGGACATGTGCTGCA-TACAGTAGTTTGAAGGACGATCCGGATGAG-CTTCAATCA 1430
Query 1427 TC-CTCGATAGATAAGGTTTTCAACTGGTTACTTAGTATA-AGACAGCTGCGTTGGAAGA 1484
| | || |||| | |||| ||||||||||||| || ||| |||||||||||| |
Sbjct 1431 TGGCAAGAGAGAT--G-TTTT-AACTGGTTACTTAA-ATTCAGAAAGCTGCGTTGGACGC 1485
Query 1485 CGCAAGAATGCCACGGGAAAGGTACGCATAAGTGTACC 1522
||||||| |||||| || |||| |||||||||||||
Sbjct 1486 CGCAAGAGTGCCACAAGACTGGTATGCATAAGTGTACC 1523
Score = 1746 bits (945), Expect = 0.0
Identities = 1138/1232 (92%), Gaps = 10/1232 (1%)
Strand=Plus/Plus
Query 1565 AAGCATGAGGTGCTCTCGACGCCATTCTT-CTTCCGGAGGTGGTGTGGAAGCATCAATGT 1623
|||||||| || ||| | |||| ||||| ||| ||||||||| ||||||||||||| ||
Sbjct 1653 AAGCATGACGTTCTCACAACGCGTTTCTTCCTT-CGGAGGTGGAGTGGAAGCATCAACGT 1711
Query 1624 ATTCAACTTTTTAGCGTATGCCACAAAAGCAGAAGTAAATCGGATCCACGATGCTAGAAG 1683
|| |||||| ||||||| |||||||||||||| ||| | |||||||||| || ||| |
Sbjct 1712 TTTTAACTTTATAGCGTACGCCACAAAAGCAGATGTAGAGAGGATCCACGACGCCAGAGG 1771
Query 1684 TAGTTTCCGCCGCTACTCATGGAAGATCATAGCTTTCCCATTCGAAAAACTCAACTTAAT 1743
||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| |
Sbjct 1772 TAGTTTCCGCCGCTACTCATGGAAGATCATAACTTTTCCATTCAAAAAACTCAACTTCGT 1831
Query 1744 CATCCAA-ACACTTCGACGATGGATTGTCAATTTCATCAATGATGTTCACAAG-TGGATC 1801
||| || | | || ||| ||||||||| || |||||||| || ||| || |||||
Sbjct 1832 CAT-AAAGAAAATTTTTGGATCGATTGTCAAGTTGATCAATGAAGTGCAC-AGACGGATC 1889
Query 1802 AGCCACAAAGTCAATGCATTATCAAGAAAATCTTCTTT-TGCTCGTCGTTGGATTTACCC 1860
|||||| |||||||||| |||||||| ||| | ||||| |||||||||| |||||||
Sbjct 1890 AGCCACGAAGTCAATGCGTTATCAAG-AAAGCATCTTTGGGCTCGTCGTTTTCTTTACCC 1948
Query 1861 TATCTACTTCAAGTTCATATCCCGCATCCCTCATTTCATCAAATCTGTGTGGGATATCCT 1920
|||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1949 TATCTATTTCGAGTTCATATCCCGCATCCCTCACTTCATCAAATCAGTGTGGGATATCCT 2008
Query 1921 CAGTGAGTTCTTTGACATCTCGGATACGCTTGATATGGTCCACAAGACGCTATTTGTACA 1980
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2009 CAGTGAGTTCTTTGACATCTCGGATACGCTTGATATGGTCCACAAGACACTATTTGTACA 2068
Query 1981 CGGAGAGCCCATGACGAAAGAATTGTGGAAGTTCATCTTCGAAGAGCTGAGAAACAAATC 2040
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 2069 TGGAGAGCCCATGACGAGAGAATTGTGGAAGTTCATCTTCGAAGAGCTGAAAAACAAATC 2128
Query 2041 AAAGTATGGAGACAGTCCTGAAAATGCCAAGAGGATATCTTTGGCTCGGGGAGAATGGAC 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2129 AAAGTATGGAGACAGTCCTGAAAATGCCAAGAGGATATCTTTGGCTCGGGGAGAATGGAC 2188
Query 2101 TTTAAGAGAGAACCTGCCGGAGGATGCTGAACGTGAAAAAATGGTACGTTATGTCACAAA 2160
|||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||
Sbjct 2189 TTTAAGAGAGAACCTGCCGGTGGATGCAGAACGTGAAAAACTGGTACGCTATGTCACAAA 2248
Query 2161 GGTCGATTATGATCAGAGTCTTTTGATGTGGCACATCGCAACTGAGCTCTGTTACCAACA 2220
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2249 GGTCGATTATGATCAGAGTCTTTTGATGTGGCACATCGCAACCGAGCTCTGTTACCAACA 2308
Query 2221 ACATGAGGAAGAGACTATCCCAGAGGGCTATGATGAACAATGCAAGCATTACAGTAACCG 2280
||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 2309 ACATGAGAAAGAGACTATCCCAGAGGGTTATGATGAACAACGCAAGCATTACAGTAACCG 2368
Query 2281 CGAGTTCAGCAAAATCATCTCAGACTACATGATGTATCTCCTGATCTTGCAACCCGGTCT 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CGAGTTCAGCAAAATCATCTCAGACTACATGATGTATCTCCTGATCTTGCAACCCGGTCT 2428
Query 2341 GATGTCCGAGGTTGCTGGAATTGGGAAGATCAGATTCAGAGACACATTGGCTGAAGCTGA 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2429 GATGTCCGAGGTTGCTGGAATTGGGAAGATCAGATTCAGAGACACATTGGCTGAAACTCA 2488
Query 2401 CAAGTTTTTCCAGAGGAGGCATATCGAGGACAAGAGAAGCGTGAAGATAGCCACCATAAA 2460
|||||| ||||||||||||||||||||| || | ||||||||| ||| ||||||| ||||
Sbjct 2489 CAAGTTCTTCCAGAGGAGGCATATCGAGAACGATAGAAGCGTGGAGACAGCCACCCTAAA 2548
Query 2461 TATTCTAGACGTCGAAAGTGAAATTGAACCAATGG-ACGTGAAGGGAGATCGAAGCAAGT 2519
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 2549 TATTCTGGACGTCGAAAGTGAAATTGAACCAATGGGA-GTGAAGGGAGATCGAAGCAAGT 2607
Query 2520 CTGTGTTGTTTGACGCGAGTAGGCTAGCCAAAGACCTTGCGGAGATGGAGAAGACGCAGA 2579
|||| |||||||||||||| |||||||||||||||||||| |||||||||||||| || |
Sbjct 2608 CTGTATTGTTTGACGCGAGCAGGCTAGCCAAAGACCTTGCAGAGATGGAGAAGACACACA 2667
Query 2580 AGAAAGACAAATGGGAGATACTGAGTAAAGTGTGGGTGGAACTTCTCTGTTATGCAGCTT 2639
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2668 ACAAAGATAAATGGGAGATACTGAGTAAAGTGTGGGTGGAACTTCTCTGTTATGCAGCCT 2727
Query 2640 GTCATTGCGACGCTACGGCTCACGTGGAGCAACTCAGCAGAGGAGGTGAGCTCATAAACT 2699
||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 2728 GTCATTGCGACTCTACGGCTCACGTGGAGCAACTCAGCAGAGGCGGAGAGCTCATAAACT 2787
Query 2700 TCGTGTGGCTTCTAATGGCTCACTTTGGACTAACAGATCAGTTCCAGATCAACAAAGGAG 2759
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2788 TCGTGTGGCTTCTAATGGCTCACTTCGGACTAACAGATCAGTTCCAGATCAACAAAGGAG 2847
Query 2760 ATGCCAGAGCCAAACTCATAATAGGCAAGTGA 2791
||||||||||||||||||| ||||||||||||
Sbjct 2848 ATGCCAGAGCCAAACTCATCATAGGCAAGTGA 2879
> AT5G45472.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT5G45470 | chr5:18422368-18425035 FORWARD
LENGTH=2258
Length=2258
Score = 1406 bits (761), Expect = 0.0
Identities = 940/1027 (92%), Gaps = 10/1027 (1%)
Strand=Plus/Minus
Query 1565 AAGCATGAGGTGCTCTCGACGCCATTCTT-CTTCCGGAGGTGGTGTGGAAGCATCAATGT 1623
|||||||| || ||| | |||| ||||| ||| ||||||||| ||||||||||||| ||
Sbjct 1023 AAGCATGACGTTCTCACAACGCGTTTCTTCCTT-CGGAGGTGGAGTGGAAGCATCAACGT 965
Query 1624 ATTCAACTTTTTAGCGTATGCCACAAAAGCAGAAGTAAATCGGATCCACGATGCTAGAAG 1683
|| |||||| ||||||| |||||||||||||| ||| | |||||||||| || ||| |
Sbjct 964 TTTTAACTTTATAGCGTACGCCACAAAAGCAGATGTAGAGAGGATCCACGACGCCAGAGG 905
Query 1684 TAGTTTCCGCCGCTACTCATGGAAGATCATAGCTTTCCCATTCGAAAAACTCAACTTAAT 1743
||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| |
Sbjct 904 TAGTTTCCGCCGCTACTCATGGAAGATCATAACTTTTCCATTCAAAAAACTCAACTTCGT 845
Query 1744 CATCCAA-ACACTTCGACGATGGATTGTCAATTTCATCAATGATGTTCACAAG-TGGATC 1801
||| || | | || ||| ||||||||| || |||||||| || ||| || |||||
Sbjct 844 CAT-AAAGAAAATTTTTGGATCGATTGTCAAGTTGATCAATGAAGTGCAC-AGACGGATC 787
Query 1802 AGCCACAAAGTCAATGCATTATCAAGAAAATCTTCTTT-TGCTCGTCGTTGGATTTACCC 1860
|||||| |||||||||| |||||||| ||| | ||||| |||||||||| |||||||
Sbjct 786 AGCCACGAAGTCAATGCGTTATCAAG-AAAGCATCTTTGGGCTCGTCGTTTTCTTTACCC 728
Query 1861 TATCTACTTCAAGTTCATATCCCGCATCCCTCATTTCATCAAATCTGTGTGGGATATCCT 1920
|||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 727 TATCTATTTCGAGTTCATATCCCGCATCCCTCACTTCATCAAATCAGTGTGGGATATCCT 668
Query 1921 CAGTGAGTTCTTTGACATCTCGGATACGCTTGATATGGTCCACAAGACGCTATTTGTACA 1980
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 667 CAGTGAGTTCTTTGACATCTCGGATACGCTTGATATGGTCCACAAGACACTATTTGTACA 608
Query 1981 CGGAGAGCCCATGACGAAAGAATTGTGGAAGTTCATCTTCGAAGAGCTGAGAAACAAATC 2040
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 607 TGGAGAGCCCATGACGAGAGAATTGTGGAAGTTCATCTTCGAAGAGCTGAAAAACAAATC 548
Query 2041 AAAGTATGGAGACAGTCCTGAAAATGCCAAGAGGATATCTTTGGCTCGGGGAGAATGGAC 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 AAAGTATGGAGACAGTCCTGAAAATGCCAAGAGGATATCTTTGGCTCGGGGAGAATGGAC 488
Query 2101 TTTAAGAGAGAACCTGCCGGAGGATGCTGAACGTGAAAAAATGGTACGTTATGTCACAAA 2160
|||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||
Sbjct 487 TTTAAGAGAGAACCTGCCGGTGGATGCAGAACGTGAAAAACTGGTACGCTATGTCACAAA 428
Query 2161 GGTCGATTATGATCAGAGTCTTTTGATGTGGCACATCGCAACTGAGCTCTGTTACCAACA 2220
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 427 GGTCGATTATGATCAGAGTCTTTTGATGTGGCACATCGCAACCGAGCTCTGTTACCAACA 368
Query 2221 ACATGAGGAAGAGACTATCCCAGAGGGCTATGATGAACAATGCAAGCATTACAGTAACCG 2280
||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 367 ACATGAGAAAGAGACTATCCCAGAGGGTTATGATGAACAACGCAAGCATTACAGTAACCG 308
Query 2281 CGAGTTCAGCAAAATCATCTCAGACTACATGATGTATCTCCTGATCTTGCAACCCGGTCT 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 CGAGTTCAGCAAAATCATCTCAGACTACATGATGTATCTCCTGATCTTGCAACCCGGTCT 248
Query 2341 GATGTCCGAGGTTGCTGGAATTGGGAAGATCAGATTCAGAGACACATTGGCTGAAGCTGA 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 247 GATGTCCGAGGTTGCTGGAATTGGGAAGATCAGATTCAGAGACACATTGGCTGAAACTCA 188
Query 2401 CAAGTTTTTCCAGAGGAGGCATATCGAGGACAAGAGAAGCGTGAAGATAGCCACCATAAA 2460
|||||| ||||||||||||||||||||| || | ||||||||| ||| ||||||| ||||
Sbjct 187 CAAGTTCTTCCAGAGGAGGCATATCGAGAACGATAGAAGCGTGGAGACAGCCACCCTAAA 128
Query 2461 TATTCTAGACGTCGAAAGTGAAATTGAACCAATGG-ACGTGAAGGGAGATCGAAGCAAGT 2519
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 127 TATTCTGGACGTCGAAAGTGAAATTGAACCAATGGGA-GTGAAGGGAGATCGAAGCAAGT 69
Query 2520 CTGTGTTGTTTGACGCGAGTAGGCTAGCCAAAGACCTTGCGGAGATGGAGAAGACGCAGA 2579
|||| |||||||||||||| |||||||||||||||||||| |||||||||||||| || |
Sbjct 68 CTGTATTGTTTGACGCGAGCAGGCTAGCCAAAGACCTTGCAGAGATGGAGAAGACACACA 9
Query 2580 AGAAAGA 2586
| |||||
Sbjct 8 ACAAAGA 2
Score = 898 bits (486), Expect = 0.0
Identities = 530/552 (96%), Gaps = 0/552 (0%)
Strand=Plus/Minus
Query 355 CCTTCAAGCCATTCTCATTTGCTTCTCTCCTCTAAGGAAACGCACACCAAGAAGGCTCTT 414
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2216 CCTTCAAGCCATTCTCATTTGCTTCTCTCCTCTAAGGAAACGTACACCAAGAAGGCTCTT 2157
Query 415 GATCGTGCTCGTTTGGTCCTCTTATCTCTTAGCAGATTGGTCTGCTAATTTCGCTGTTGG 474
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2156 GATCGTGCTTGTTTGGTCCTCTTATCTCTTAGCAGATTGGTCTGCTAATTTCGCTGTTGG 2097
Query 475 TCTCATCTCCAAGAACCAAGGTAAAGATCTCAAACCTGGTGCCCCTCCACAGGACAAAAA 534
||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2096 TCTTATCTCCAAGAATCAAGGTAAAGATCTCAAACCTGATGACCCTCCACAGGACAAAAA 2037
Query 535 GCTCATGGCTTTATGGGCACCATTCTTGCTTTTGCATCTTGGTGGACCAGATACAATCAC 594
| | |||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 2036 GGTAATGGCTTTATGGGCACCATTCTTGCTCTTGCATCTTGGTGGACCAGACACTATCAC 1977
Query 595 AGCTTTCGCGCTTGAAGATAACGCTCTCTGGCTCCGACATGTCTTTGGGCTTGTCTTTCA 654
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1976 AGCTTTCGCGCTTGAAGATAACGCTCTCTGGCTACGACATGTCTTTGGGCTTGTCTTTCA 1917
Query 655 GGCAATTGCTGGTGTCTATGTCGTTCTCATGTCTCTCCCCAATAGCCTTTGGGTGATTAT 714
||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| ||||
Sbjct 1916 GGCAATTGCTGGTGTCTATGTGGTTGTCATGTCTCTGCCCAATAGCCTTTGGGTGGTTAT 1857
Query 715 ACTCTTAGTGTTCGTTTCTGGGACTATAAAGTATCTGGAGAGGACAACGGCTTTGTATAG 774
| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1856 AGTCTTAGTGTTTGTTTCTGGGACTATAAAGTATCTGGAGAGGACAACGGCTCTGTATAG 1797
Query 775 TGCCAGTTTGGACAAGTTTAGGGACTCTATGATTCAAGCACCAGATCCAGGACCAAACTA 834
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 TGCAAGTTTGGACAAGTTTAGGGACTCTATGATTCAAGCACCAGATCCAGGACCAAACTA 1737
Query 835 CGCCAAGCTCATGGAGGAGTACAAGGCCAAGAAAGAGGCAAGACTACCCACCAAGATCAT 894
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1736 CGCCAAGCTCATGGAGGAGTACAAGGCCAAGAAAGAGGCAAGACTTCCCACCAAGATCGT 1677
Query 895 TCTGATTGATGA 906
||||||||||||
Sbjct 1676 TCTGATTGATGA 1665
Score = 569 bits (308), Expect = 4e-161
Identities = 451/519 (87%), Gaps = 13/519 (3%)
Strand=Plus/Minus
Query 1009 CAAATTCTTCAACACATTCAAGGGCCTTGTGGTCAACCTTATCTTCAGCTTCAGGGAGCG 1068
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1663 CAAATTCTTCAACACATTCAAGGGCCTTGTAGTCAACCTTATCTTCAGCTTCAGGGAGCG 1604
Query 1069 TGACGAGAGCCTAGAGATCTTTGAGAATTTAAAGGATTCAGAGGAAGCTTTGAGGATCAT 1128
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1603 TGACGAGAGCCTAGAGATCTTTGAGAATTTAAATGATCCAGAGGAAGCTTTGAGGATCAT 1544
Query 1129 TGAAATTGAGCTTGG-TTTCCTTTATGATGCTCTATTCACCAAGATCGCGATTCTTCATA 1187
||| |||||||| || |||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1543 TGAGATTGAGCTCGGCTTTC-TCTATGATGCTCTATTCACCAAGATCGCGATTCTTCATA 1485
Query 1188 CCTTTATTGGAACTTTCTCACGCATCCTTGCTTCTGGCACCCTGGTGGCTGCATTCATCC 1247
|| |||||||||| ||||||| || |||||||||| ||||| |||||||||||||||
Sbjct 1484 CCGGTATTGGAACTGTCTCACGGGTCTTTGCTTCTGGTACCCTTGTGGCTGCATTCATCA 1425
Query 1248 TCTTTCATAAGAAACCCAAGAAAGACATACAATTTCATGGTGCTGATGTTGTGGTTACCT 1307
| |||||||||||||| || |||| || | | |||||||| |||||||| || ||||| |
Sbjct 1424 TTTTTCATAAGAAACCTAACAAAGGCACAGATTTTCATGGAGCTGATGTCGTAGTTACTT 1365
Query 1308 ACACGCTGTTTGCAGTTGGTGTAGTTTTGGATTTCATATCCATCCTTTTGTTTCTGTTCT 1367
| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1364 ATACGCTGTTTGCAGTTGGCCTAGTTTTGGATTTCATATCCATCCTTTTGTTCCTGTTCT 1305
Query 1368 CAGACTGGACGTGTGCTGCACTAC-GTAGCTTAAAGGACAACCCCGACAAGGCT-CTATC 1425
|||||||||| ||||||||| ||| |||| || |||||| | || || || || | |||
Sbjct 1304 CAGACTGGACATGTGCTGCA-TACAGTAGTTTGAAGGACGATCCGGATGAG-CTTCAATC 1247
Query 1426 GTC-CTCGATAGATAAGGTTTTCAACTGGTTACTTAGTATA-AGACAGCTGCGTTGGAAG 1483
| | || |||| | |||| ||||||||||||| || ||| |||||||||||| |
Sbjct 1246 ATGGCAAGAGAGAT--G-TTTT-AACTGGTTACTTAA-ATTCAGAAAGCTGCGTTGGACG 1192
Query 1484 ACGCAAGAATGCCACGGGAAAGGTACGCATAAGTGTACC 1522
||||||| |||||| || |||| |||||||||||||
Sbjct 1191 CCGCAAGAGTGCCACAAGACTGGTATGCATAAGTGTACC 1153
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143427290037
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5