BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494446 Length=875 Score E Sequences producing significant alignments: (Bits) Value AT5G45350.1 | Symbols: | proline-rich family protein | chr5:18... 1232 0.0 > AT5G45350.1 | Symbols: | proline-rich family protein | chr5:18381837-18383699 REVERSE LENGTH=862 Length=862 Score = 1232 bits (667), Expect = 0.0 Identities = 816/883 (92%), Gaps = 30/883 (3%) Strand=Plus/Plus Query 1 CTCTACCAATTTTGTTTCGACATATTTCGCGATTCGTGTCTTAGGTTTTGTTGCTGATTG 60 |||| ||||||| |||||||||||||||||||||| |||| |||||||||| ||||||| Sbjct 1 CTCTTCCAATTTCGTTTCGACATATTTCGCGATTC--GTCTAAGGTTTTGTTACTGATTG 58 Query 61 AGAAAACATGGGAGGTGATAATGACAATGACAAAGGCAAAGGGTTTCAAGGGTATCCTCC 120 |||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||| Sbjct 59 AGAAAACATGGGAGGTGACAATGATAATGACAAAGACAAAGGGTTTCATGGGTATCCTCC 118 Query 121 CGCTGGATACCCGCCGGGTCTTGGGGCTTCTCCGCCTGCTGGATATCCACAACAAGGTTA 180 |||||||||||| || | |||||||| ||| || |||||||| |||||||||||||| Sbjct 119 CGCTGGATACCCACC---CCCTGGGGCTTATCCACCCGCTGGATACCCACAACAAGGTTA 175 Query 181 CCCTCCACCACCTGGTGCTTACCCGCCTGCAGGTTATCCTCCGGGTGCATACCCACCTGC 240 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 176 CCCTCCACCACCCGGTGCTTACCCGCCTGCAGGTTATCCTCCGGGTGCCTACCCACCTGC 235 Query 241 ACCTGGTGGTTATCCTCCAGCCCCTGGTTATGGTGGTTATCCTCCAGCTCCTGGTTATGG 300 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 236 TCCTGGTGGTTATCCTCCCGCCCCTGGTTATGGTGGTTATCCTCCAGCTCCTGGTTATGG 295 Query 301 AGGTTATCCTCCTGCACCTGGTCATGGTGGTTACCCTCCTGCTGGCTATCCTGCTAATCA 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 296 AGGTTATCCTCCTGCACCTGGTCATGGTGGTTACCCTCCTGCTGGCTATCCTGCTCATCA 355 Query 361 CTCAGGACACGCAGGAGGAATTGGGGGTATGATTGCAGGTGCTGCAGCTGCCTATGGAGC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 CTCAGGACACGCAGGAGGAATTGGGGGTATGATTGCAGGTGCTGCAGCTGCCTATGGAGC 415 Query 421 TCACCACATAGCTCATAGCTCTCACGCCCCTTACGGACATGCTGCATACGGTCACGGCTT 480 ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct 416 TCACCACGTAGCTCATAGCTCTCACGGTCCTTACGGACATGCTGCATATGGTCACGGTTT 475 Query 481 TGGCCATGGACATGGCTATGGCTATGGTCATGGT-A----A-GTTCAAGCATGGGAAGCA 534 ||||||||| |||||||||||||||||||||||| | | |||||||||||||||||| Sbjct 476 TGGCCATGGTCATGGCTATGGCTATGGTCATGGTCATGGTAAGTTCAAGCATGGGAAGCA 535 Query 535 CGGGAAGTTCAAGCATGGGAAGCATGGGATGCTTGGAGGAGGCAAGTTCAAGAAGTGGAA 594 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 536 CGGGAAGTTCAAGCATGGGAAGCATGGAATGTTTGGAGGAGGCAAGTTCAAGAAGTGGAA 595 Query 595 GTGATCTAGTTAATACCTTTTGTGAATCTCTCTGGACTGACCAATGTTTCAAATAAGCCC 654 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 596 GTGATCTAGTTAATACCTTTTGTGAATCTGTCTGGACTGACCAATGTTTCAAATAAGCCC 655 Query 655 TAAAACATTATTATATAAGTTGGCTTTCGTCGGTTAGATTGCTGGTTCGAGTTGGAATAA 714 |||| |||||| ||| | |||| ||||||||||||||||||||||||||||||||||||| Sbjct 656 TAAA-CATTAT-ATA-A-GTTGACTTTCGTCGGTTAGATTGCTGGTTCGAGTTGGAATAA 711 Query 715 TT-AAACTTAATTAGTAGT-ATGATATCTTATTGTGTACTTTGAAGCTATCTTTGGCTTT 772 || |||||||||||||| | | | ||||||||||||||||| |||||||| |||||||| Sbjct 712 TTGAAACTTAATTAGTA-TCA--A-ATCTTATTGTGTACTTTAAAGCTATCGTTGGCTTT 767 Query 773 ATAATGACAGATTCTGCTGGTTTCGGTGTGTGGTTTTTGAGAtttttttGTATATATACT 832 |||||||||||||||| | ||||||||||| ||||| |||||||| ||||||| || Sbjct 768 ATAATGACAGATTCTG--G-TTTCGGTGTGTTGTTTTA-AGATTTTT--GTATATA--CT 819 Query 833 GATTTTTAATATTGCTTAAGCTTATGGAAGTCATGATTATGAT 875 | |||||| ||||||||||||||| ||||||||||||||||| Sbjct 820 GTTTTTTAC-ATTGCTTAAGCTTATAGAAGTCATGATTATGAT 861 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42699024950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5