BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494475
Length=3560
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 2754 0.0
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 667 0.0
> AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18182038-18186495 FORWARD LENGTH=3926
Length=3926
Score = 2754 bits (1491), Expect = 0.0
Identities = 1804/1953 (92%), Gaps = 30/1953 (2%)
Strand=Plus/Plus
Query 1627 CAAGACATAATTAATGTACAACAGAAAACAATGGGAGCTGCCGATGTCAGAGGTATTTTC 1686
|||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct 1624 CAAGACATAATTAATGTACAGCAGAAAACAATGGGAGCTGCAAATGTTAGAGGTATTTTC 1683
Query 1687 CTAGATTTGTCTGAAGTGAAGGGTGAAACAAGCTTAGACCGTGAACACTTCAAAAATATG 1746
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 1684 CTAGATTTGTCTGAAGTGAAGGTTGAAACAAGCTTAGACCGTGAACACTTCAAGAATATG 1743
Query 1747 CGCAATCTCCGGTATCTCAAGTTCTATAATTCTCATTGTCCTCAAGAATGTAAAACCAAC 1806
||||||||||||||||||||||| || ||||| ||||| ||||| |||||| ||||||
Sbjct 1744 CGCAATCTCCGGTATCTCAAGTTATACAATTCACATTGCCCTCACGAATGTCTAACCAAT 1803
Query 1807 AATAAGATAAACATGCCTGATGGACTTGAGCTACCATTGAAAGAGGTCCGATGCCTTCAC 1866
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1804 AATAAGATAAACATGCCTGATGGACTTGAGCTACCATTGAAAGAGGTTCGATGCCTTCAC 1863
Query 1867 TGGCTGAAATTCCCATTGGAGGAACTTCCAAACGATTTTGACCCGATTAATCTCGTCGAC 1926
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1864 TGGCTGAAATTCCCATTAGAGGAACTTCCAAACGATTTTGACCCGATTAATCTCGTCGAC 1923
Query 1927 CTTAAGCTGACATACAGTGAGATTGAACGACTTTGGGAGGGTGTTAAGGATACACCAGTC 1986
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1924 CTTAAGCTGCCATACAGTGAGATTGAACGACTTTGGGATGGTGTTAAGGATACACCAGTC 1983
Query 1987 TTAAAATGGGTTGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAG 2046
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1984 TTAAAATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAG 2043
Query 2047 GCTCAAAATCTTCAAAGACTGAACCTTGAAGGCTGCACAAGTCTTGAATCCCTTCGAAAT 2106
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct 2044 GCTCAAAATCTTCAAAGACTGAACCTTGAAGGGTGCACAAGTCTTGAATCTCTTCGAGAT 2103
Query 2107 GTGAATTTGATGTCTTTGAAAACTCTCACCCTCAGCAACTGCTCAAATTTCAAGGAATTT 2166
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2104 GTGAATTTGACGTCTTTGAAAACTCTCACCCTCAGCAACTGCTCAAACTTCAAGGAATTT 2163
Query 2167 CCATTGATTCCAGAAAATCTAGAAGCTTTATACTTGGACGGAACAGCGATAAGTCAACTT 2226
|||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||
Sbjct 2164 CCATTGATTCCAGAAAATTTAAAAGCTTTATACTTGGACGGGACATCGATAAGTCAACTT 2223
Query 2227 CCTGACAACGTGGTGAACCTCAAGAGACTCGTCTTATTGAATATGAAGGACTGCAAAATG 2286
||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||
Sbjct 2224 CCTGACAACGTGGGGAACCTCAAAAGACTTGTCTTATTGAATATGAAGGACTGCAAAGTG 2283
Query 2287 CTGGAGACTATTTCTACCTGTCTTGGTGAGTTGAAAGCTCTTCAAAAACTGGTACTCTCT 2346
||||||||||| |||||||| || ||||| ||||| ||||||||||||| ||||| ||
Sbjct 2284 CTGGAGACTATCCCTACCTGTGTTAGTGAGCTGAAAACTCTTCAAAAACTTGTACTTTCA 2343
Query 2347 GGTTGTTTAAAGCTCAAGGAATTTCCAGAAATCAACAAGAGCTCTTTAAAATTTTTACTT 2406
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2344 GGTTGTTCAAAGCTCAAGGAATTTCCAGAAATCAACAAGAGCTCTTTAAAAATTTTACTT 2403
Query 2407 CTGGATGGGACATCCATCAAAACGATGCCGCAGTTACATTCAGTGCAATATTTATGCTTA 2466
|| |||||||||||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct 2404 CTAGATGGGACATCCATCAAAACGATGCCGCAGTTACCCTCAGTACAGTATTTATGCTTA 2463
Query 2467 AGCAGAAATGATCATATCAGCTACCTACGGGTTGGCATCAATCAACTTTATCAGTTAACA 2526
||||||||||||||| ||| |||||| | | ||||||||||||| ||| ||||||||||
Sbjct 2464 AGCAGAAATGATCATCTCATCTACCTTCCAGCTGGCATCAATCAAGTTTCTCAGTTAACA 2523
Query 2527 CGGCTGGATTTGAAGTATTGTACGAAGCTTACATATGTTCCAGAATTGCCACCAACCCTC 2586
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 2524 CGGCTGGATTTGAAGTATTGTACGAAGCTTACATATGTTCCAGAGTTGCCACCAACTCTC 2583
Query 2587 CAGTACTTAGATGCACACGGCTGTAGCTCACTGAAGAATGTTGCAACACCACTGGCCCGT 2646
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 2584 CAGTACTTAGATGCACATGGCTGTAGCTCACTGAAGAATGTTGCAAAACCACTGGCCCGT 2643
Query 2647 ATCGTGTCAACCGTGCAGAACCATTGCACTTTCAACTTCACCAACTGTGGTAACCTGGAG 2706
||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 2644 ATCATGTCAACCGTGCAGAACCATTACACTTTCAATTTCACCAACTGTGGTAACCTGGAG 2703
Query 2707 CAAGCTGCAAAGGAGGAAATCACATCATATGCTCAAAGGAAATGCCAGTTACT-TCCAGA 2765
|||||||||||||||||||||||||| ||||||||||| ||||| ||||| || || |||
Sbjct 2704 CAAGCTGCAAAGGAGGAAATCACATCGTATGCTCAAAGAAAATGTCAGTTGCTGTC-AGA 2762
Query 2766 TGCTCGTAAACACTACAATGAGGGTCTTAGTTCAGAGGCTTTGTTTAGCACTTGCTTTCC 2825
||| ||||||||||||||||||||| | ||||||||||||| ||||||||||||||
Sbjct 2763 TGCACGTAAACACTACAATGAGGGT-T-----CAGAGGCTTTGTTCAGCACTTGCTTTCC 2816
Query 2826 TGGATGTGAGGTGCCTTCGTGGTTTTGTCATGAAGCAGTTGGATCTCTATTACAACGAAA 2885
||||||||||||||||||||||||| |||||||||| ||||||||||| || ||| ||||
Sbjct 2817 TGGATGTGAGGTGCCTTCGTGGTTTGGTCATGAAGCGGTTGGATCTCTGTTGCAAAGAAA 2876
Query 2886 ACTGCTCCCACATTGGCATGACGAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTC 2945
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2877 ACTCCTCCCACATTGGCATGACAAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTC 2936
Query 2946 ATTTCTTGA-AGGCCAAGATCAAATCAGCTGCTTCTCGGTGACATGCACCTTTAAAATAA 3004
||||| ||| || |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2937 ATTTCCTGACAG-CCAAGATCAACTCAGCTGCTTCTCGGTGACATGCACCTTTAAAATAA 2995
Query 3005 AAGCTGAAGACAATTCTTGGGTCCCCTTTACTTGCCCAGTAGGAATTTGGACTAGAGAGG 3064
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2996 AAGCTGAAGACAAGTCTTGGGTCCCCTTTACTTGCCCGGTAGGAATTTGGACTAGAGAGG 3055
Query 3065 GAGACGAGAAAGACAAGATTGAGTCAGATCATGTTTTTATAGCTTACATTAGTTGCCCAA 3124
|| || ||||||||| ||||||||| ||||||||||| ||||| ||||||||| |||||
Sbjct 3056 GAAACAAGAAAGACAGGATTGAGTCGGATCATGTTTTCATAGCCTACATTAGTAGCCCAC 3115
Query 3125 ATACAATAAGGCGTCTCGAAGACCAGAACTCTGATAAATGCAATTTTACTGAAGCCTCTC 3184
|| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct 3116 ATTCAATAAGGTGTCTCGAAGAGAAGAACTCTGATAAATGCAATTTTAGTGAAGCCTCCC 3175
Query 3185 TCGAGTTTAC--TG-----TGA--CAAGTGGTATAGGAGTATTCAAGGTGTTGAAGTGCG 3235
| |||||||| || ||| |||||||||| |||||||||||||| |||||||| |
Sbjct 3176 TTGAGTTTACGGTGACAAGTGATACAAGTGGTATTGGAGTATTCAAGGTTTTGAAGTGTG 3235
Query 3236 GATTGAGTTTGGTGTATGAAAATGATAAAAACAAAAACAGTTCTCTTGAGGCAAAGTATG 3295
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3236 GATTGAGTTTGGTGTATGAAAATGACAAAAACAAAAACAGTTCTCTTGAGGCAAAGTATG 3295
Query 3296 ATGTTCCTGTTGAAGTGAGCTTTCAAGAACCAGGACACGGGATAATGGAGGAGgaaagaa 3355
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 3296 ATGTTCCTGTTGAAGTGAGCTTTCAAGAACCAGAACACGGGATAATGGAGGAGGAGAGAT 3355
Query 3356 atataaacaaaagaagaagtgacgatagacgaccaaaaaagaagcgaaaaacaagaagGG 3415
|||||||||||||||||||||| ||||||||||||||||||||| | || |||| |||||
Sbjct 3356 ATATAAACAAAAGAAGAAGTGATGATAGACGACCAAAAAAGAAGAGGAAGACAAAAAGGG 3415
Query 3416 ATGCTATTAC--------CCACCGTCACTCAAACTTGTGGTGCAGGTGTAACTCCAAGAA 3467
||| ||||| |||| |||||||||||||||| | || |||||| | ||||||
Sbjct 3416 ATGATATTATGATAATATCCACTGTCACTCAAACTTGTGTTCCAAGTGTAAATGCAAGAA 3475
Query 3468 TGGAAGATAAACTCACTGGTTAAGCAAATGGTTGAAAAATCTCCAAGGTGGTGGGATGAA 3527
| ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 3476 TAGAAGATAAAGTCACTGGTTAAGCAAATGGTTGAAAAATCTCCAAGGTGG-G--ATGAA 3532
Query 3528 TATGTTTCAGGTGAACCACATTCTTACAAAACA 3560
|||| ||||||||||||| ||||||||||||||
Sbjct 3533 TATGGTTCAGGTGAACCAGATTCTTACAAAACA 3565
Score = 1515 bits (820), Expect = 0.0
Identities = 983/1063 (92%), Gaps = 6/1063 (1%)
Strand=Plus/Plus
Query 569 CATCGGAGGGAAGTCGAAA---GGTCGCTGTGGATCGATCAGAAATTATCGACACTAGAA 625
||| ||||||||| | ||| |||| ||||||||| |||| ||| ||| |||||| ||
Sbjct 533 CATTGGAGGGAAGCCAAAAGGTGGTCTCTGTGGATCCATCACAAAGTATTGACACTCTAA 592
Query 626 CTTCGGCAGAAGGCGAAAAGGATAAGACTTTTGGAATCAAACAACAGTTGAAGGAGTTGG 685
||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 593 GTTCGGTAGGAGGTGAAAAGGATAAGACTTTTGGAATCAAACAACGGTTGAAGGAGTTGG 652
Query 686 AAGATAAGTTGGATCTTATTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGGATGC 745
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AAGAGAAGTTGGATCTTGTTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGGATGC 712
Query 746 CGGGAATTGGTAAAACCACGCTGCTCAAAGAGCTCTATAAGACATGGAAGGGAAAGTTTT 805
| |||||||| |||||||| ||| | ||||||||||||||||| ||| |||| |||||||
Sbjct 713 CTGGAATTGGCAAAACCACACTGGTGAAAGAGCTCTATAAGACCTGGCAGGGCAAGTTTT 772
Query 806 CGAGGTATGCGTTAATCGATCAAATCCGTGGAAAGTCAAATAACTTCAGGTTAGAGTGCT 865
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 773 CGAGGTATGCGTTGATCGATCAAATCCGTGGGAAGTCAAATAACTTCAGGTTAGAGTGCT 832
Query 866 TGCCTACATTGCTTTTAGAGAAATTACTACCGGAGTTGAATAATCTTCAAATAGATAGTG 925
||||||| |||||||||||||| ||||||||||||||||||||| |||| ||||||||
Sbjct 833 TGCCTACTTTGCTTTTAGAGAAGCTACTACCGGAGTTGAATAATCCTCAACTAGATAGTA 892
Query 926 TTGAAGAACCATACAAAACTCATAAGGGTCTGCTGCGCGAACGCAAAGTTCTTGTCGTTC 985
||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |
Sbjct 893 TTGAAGAACCATACAAAACTCATAAGGGTCTACTGCGTGAACGCAAAGTTCTCGTCGTCC 952
Query 986 TTGATGATGTTAGTGA-AAGGGAACAAATATATGCTCTTCTTGGGAAATATGATCTTCAA 1044
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 TTGATGATGTTAGT-AGAAGGGAACAAATATATGCTCTTCTTGGGAAATATGATCTTCAC 1011
Query 1045 AATAAGCATGAGTGGATCAAAGATGGCAGCAGGATTGTCATTGCGACAAACGACAAGTCC 1104
| ||| ||||||||||||||||||||||||||||| ||||||| || ||||| | |||
Sbjct 1012 AGTAAACATGAGTGGATCAAAGATGGCAGCAGGATCATCATTGCAACGAACGATATCTCC 1071
Query 1105 TTATTGAAGGGTCTTGTTCATGACACTTACGTGGTCCGACAGTTAAACCACAGAGACGGT 1164
| |||||||||||| |||||||||||||| ||||| || || |||||||||||||||||
Sbjct 1072 TCATTGAAGGGTCTCGTTCATGACACTTATGTGGTTCGGCAATTAAACCACAGAGACGGC 1131
Query 1165 TTACAACTTTTTCGCTATCATGCCTTTCATGATGATCAAGCCATTGCTCCCAAGGTGGAT 1224
|||||||||||||||||||| ||||||||| |||||||||||| | |||| |||||||||
Sbjct 1132 TTACAACTTTTTCGCTATCACGCCTTTCATTATGATCAAGCCACTCCTCCAAAGGTGGAT 1191
Query 1225 TTCATGAAGCTTTCTGATGAGTTCGTGCATTATGCCAGAGGCCATCCACTAGCTCTCAAA 1284
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1192 TTCATGAAGCTTTCTGATGAGTTTGTGCATTATGCTAGAGGCCATCCACTAGCTCTCAAA 1251
Query 1285 ATATTGGGTAGAGAGCTTTATGAGAAAAATATGAAGCATTGGGAAACAAAACTGAAAATA 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1252 ATATTGGGTAGAGAGCTTTATGAGAAAAATATGAAGCATTGGGAAACAAAACTGATAATA 1311
Query 1345 CTCGCTCAAAGTCCCACCACTTATATTGGAGAGGTCGTGCAAGTAAGTTTTGATGAATTG 1404
|| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1312 CTTGCTCAAAGTCCCACCACTTATATTGGAGAAGTCGTGCAAGTAAGTTATGATGAATTG 1371
Query 1405 AGTATGGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGATCGCAGGATGTGGAT 1464
||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1372 AGTTTGGCGCAGAAAGATGCATTTCTCGACATAGCTTGTTTCAGATCACAGGATGTGGAT 1431
Query 1465 TATGTAGAAAGTTTACTGGTTTCGTCTGACCCCGGATCTGCTGAAGCAATTAAAGCTCTC 1524
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1432 TATGTAGAAAGTTTACTGGTTTCGTCTGACCCTGGATCTGCTGAAGCAATAAAAGCTCTC 1491
Query 1525 AAGAATAAGTTCCTGATTGATACTTGTGACGGCCGTGTGGAGATGCATGATCTACTGTAT 1584
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1492 AAGAATAAGTTCTTGATTGATACATGTGACGGCCGTGTGGAGATGCATGATCTACTGTAT 1551
Query 1585 ACATTTTCTAGGGAACTTGATCTTAGAGCATCCACTCA-GGTG 1626
| ||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1552 AGATTTTCTAGGGAACTTGATCTTAAAGCATCCACTCAAGGTG 1594
Score = 763 bits (413), Expect = 0.0
Identities = 524/577 (91%), Gaps = 10/577 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGCGTCCTCCTCCTCCTCCGATCTCCCACCGCAACAACATCAAGTATTCATCAAT 60
||||| || ||||| |||||| ||| ||||||| | | ||||||||||||||||||||||
Sbjct 1 ATGGCGGCCTCCTCTTCCTCCACCGGTCTCCCA-C-C-ACAACATCAAGTATTCATCAAT 57
Query 61 TTCCGTGGAGAAGATTTACGCCTGGGATTCGTCAGCCATCTCGTCGAAGCCTTAGAAAAC 120
|||||||||||||||||||| || |||||||| |||||||| || ||||| |||||||||
Sbjct 58 TTCCGTGGAGAAGATTTACGACTCGGATTCGTAAGCCATCTAGTAGAAGCTTTAGAAAAC 117
Query 121 GATAACATAAAAGTCTTCATCGACAATTACGCAGACAAAGGCGAACCTCTAGAAACACTT 180
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 118 GATAACATAAAAGTCTTCATCGACAACTACGCAGACAAAGGCGAACCTTTAGAAACACTT 177
Query 181 TTAACTAAGATACAAGAGTCTCGAA-TCGCTCTAGCTATCTTCTCTGGGAAGTACACAGA 239
||||| |||||||| || || | || ||||||||||||||||||| ||||||||||| ||
Sbjct 178 TTAACCAAGATACATGACTC-CAAAATCGCTCTAGCTATCTTCTCCGGGAAGTACACTGA 236
Query 240 ATCAACATGGTGCTTGAGAGAGCTAGCGATGATCAAAGATTGTGTTGAGAAAGGTAACCT 299
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 237 ATCAACATGGTGCTTGAGAGAGCTAGCGATGATAAAAGATTGTGTGGAGAAAGGTAAACT 296
Query 300 TGTTGCTATTCCTATCTTCTACAAGTTGGATCCATCTACTGTTAGAGGTGTTAGAGGACA 359
||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| ||
Sbjct 297 TGTTGCTATTCCTATCTTCTACAAGGTAGATCCATCCACTGTTAGAGGTGTTAGAGGGCA 356
Query 360 GTTCGGTGATGCTTTTAGGGATCTTGAGGAACGTGATGTG-TTGAAGAAGAAAGAGTGGA 418
|||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||
Sbjct 357 GTTCGGTGATGCTTTTAGAGATCTTGAGGAACGTGATGTGATT-AAGAAGAAAGAGTGGA 415
Query 419 AAAAAGCTTTGAAATGGGTTCCTGACTTAATTGGCATAACTGTTCATAATAAAAGTCCTG 478
|| |||||||||| ||| |||||| ||||||||| || |||||||| ||||||||||||
Sbjct 416 AACAAGCTTTGAAGTGGATTCCTGGCTTAATTGGTATCACTGTTCACGATAAAAGTCCTG 475
Query 479 AGAGTGAAATACTTAACGAAATCGTTAGGGAGGTTAAGAAAGTGTTGAAGAAAGTTCCAT 538
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 476 AGAGTGAAATACTCAACGAAATCGTTAAGGAGGTTAAGAAAGTGTTGAAGAAAGTTTCAT 535
Query 539 TGAAGGGAAGCCGAAAT-T--TCTTTGTGGAACCATC 572
|| ||||||||| ||| | ||| |||||| |||||
Sbjct 536 TGGAGGGAAGCCAAAAGGTGGTCTCTGTGGATCCATC 572
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 667 bits (361), Expect = 0.0
Identities = 814/1025 (79%), Gaps = 61/1025 (6%)
Strand=Plus/Plus
Query 623 GAACTTCGGCAGAAGGCGAAAAGGATAAGACTTTTGGAATCAAACAACAGTTGAAGGAGT 682
||||||| ||| || | ||||| || |||||||||||| | |||||| ||| || || |
Sbjct 590 GAACTTCCTCAGGAGACAAAAAGCATGAGACTTTTGGAAACGAACAACGGTTAAAAGATT 649
Query 683 TGGAAGATAAGTTGGATC-TTATTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGG 741
||||||| |||||||||| | | ||||||||||||||||||| |||||||||||||||||
Sbjct 650 TGGAAGAGAAGTTGGATCGTGA-TAAATACAAGGGAACTCGTATCATTGGAGTTGTTGGG 708
Query 742 ATGCCGGGAATTGGTAAAACCACGCTGCTCAAAGAGCTCTATAAGACATGGAAGGGAAAG 801
||||| ||||||||||||||||| || || |||||||| |||||||| ||| |||| |||
Sbjct 709 ATGCCCGGAATTGGTAAAACCACACTCCTGAAAGAGCTATATAAGACGTGGCAGGGCAAG 768
Query 802 TTTTCGAGGTATGCGTTAATCGATCAAATCCGTGGAAAGTCAAATAACTTCAG-GTTAGA 860
||||||||| ||||| |||||||||||||||||| |||||| || |||| | ||| ||
Sbjct 769 TTTTCGAGGCATGCGCTAATCGATCAAATCCGTGTAAAGTCCAAGCACTT-GGAGTTGGA 827
Query 861 GT-GCTTGCCTAC-ATTGCTTTTA-GAGAAATTACTACCGGAGTTGAATAATCTTCAAAT 917
| |||||||| | | |||| ||| | | | || | || |||| || ||| ||| |
Sbjct 828 -TCGCTTGCCT-CAAATGCTCTTAGGCG-AGTT-GT-CC-AAGTTAAACCATCCTCACGT 881
Query 918 AGATAGTGTTGAAGAACCATACAAAACTCATAAGGGTCTGCTGCGCGAACGCAAAGTTCT 977
||| | | | |||| |||||| | || || |||| ||||||||||| ||
Sbjct 882 AGACAATCTCAAAGATCCATAC---AGTC--AA-------CTGCATGAACGCAAAGTGCT 929
Query 978 TGTCGTTCTTGATGATGTTAGTGAAAGGGAACAAATATATGCTCTTCTTGGGA-AATATG 1036
||| || ||||||||||||||| |||||||||||||| ||||||||| || || | || |
Sbjct 930 TGTTGTACTTGATGATGTTAGTAAAAGGGAACAAATAGATGCTCTTCGTGAGATACTA-G 988
Query 1037 ATCTTCAAAATAAGCATGAGTGGATCAAAGATGGCAGCAGGATTGTCATTGCGACAAACG 1096
| | | | |||| ||| || | || || || |||||| |||||||||| |||| ||
Sbjct 989 A-C-T-GGATTAAG---GAG-GG-T-AAGGAGGGAAGCAGGGTTGTCATTGCAACAAGCG 1039
Query 1097 ACAAGTCCTTATTGAAGGGTCTT-GTTCATGACACTTACGTGGTCCGACAGTTAAACCAC 1155
||| ||||||| || ||| || ||| |||| |||||| |||| | | | || ||||||
Sbjct 1040 ACATGTCCTTAACAAATGGT-TTGGTTGATGATACTTACATGGTTCAAAATTTGAACCAC 1098
Query 1156 AGAGACGGTTTACAACTTTTTCGCTATCATGCCTTTCA-TGATGATCAAGCCATTGCTCC 1214
||||| | |||||||| |||| ||||||||||||| | |||||||||||||| | |||
Sbjct 1099 AGAGATAGCTTACAACTATTTCACTATCATGCCTTT-ATTGATGATCAAGCCAATCCTCA 1157
Query 1215 CAAGGTGGATTTCATGAAGCTTTCTGATGAGTTCGTGCATTATGCCAGAGGCCATCCACT 1274
||| |||||||||||||| || || | ||| || ||||| |||||||||||||||||
Sbjct 1158 AAAGAAAGATTTCATGAAGCTGTCAGAAGGGTTTGTACATTACGCCAGAGGCCATCCACT 1217
Query 1275 AGCTCTCAAAATATTGGGTAGAGAGCTTTATGAGAAAAATATGAAGCATTGGGAA-AC-A 1332
||| |||||| |||||||| |||||||| || |||||| |||| | |||| |||| | |
Sbjct 1218 AGCCCTCAAAGTATTGGGTGGAGAGCTTAATAAGAAAAGTATGGATCATT-GGAATTCGA 1276
Query 1333 AAACTGAA-AATACTCGCTCAAAGTCCCA-CCACTTATATTGGAGAG-GTCGTGCAAGTA 1389
||| |||| || ||| || || || |||| || || ||||| | || ||| | |||||
Sbjct 1277 AAA-TGAAGAA-ACTTGCACAGAGCCCCAGCC-CTAATATT-GTCAGTGTCTTCCAAGTG 1332
Query 1390 AGTTTTGATGAATTGAGTATGGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGA 1449
|||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGTTATGATGAATTGACTACAGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGA 1392
Query 1450 TCGCAGGATGTGGATTATGTAGAAAGTTTACTGGTTTCGTCTGACCCCGGATCTGCTGAA 1509
|| ||||| |||||||||||||||| |||||| ||| ||||||| || || ||||||
Sbjct 1393 TCACAGGACAAGGATTATGTAGAAAGTCTACTGGCTTCATCTGACCTTGGTTCGGCTGAA 1452
Query 1510 GCAAT---T--A---AAG-CTCTCAAGAATAAGTTCCTGATTGATACTTGTGACGGCCGT 1560
||||| | | || |||||| | |||||||||||||| |||||||||| |||||
Sbjct 1453 GCAATGAGTGCAGTCAAATCTCTCACGGATAAGTTCCTGATTAATACTTGTGATGGCCGA 1512
Query 1561 GTGGAGATGCATGATCTACTGTATACATTTTCTAGGGAACTTGATCTTAGAG-CATCCAC 1619
|||||||||||||||||| | |||| |||||| |||||| ||||||| | || |||| |
Sbjct 1513 GTGGAGATGCATGATCTATTATATAAATTTTCAAGGGAAGTTGATCTGA-AGGCATCTAA 1571
Query 1620 TCAGG 1624
|||||
Sbjct 1572 TCAGG 1576
Score = 503 bits (272), Expect = 5e-141
Identities = 398/459 (87%), Gaps = 8/459 (2%)
Strand=Plus/Plus
Query 1632 CATAATTAATGTACAACAGAAA-ACAATGGGAGCTGCCGATGTCAGAGGTATTTTCCTAG 1690
|||||| |||||| || ||| | |||| ||||||| |||| ||||||||||||||||
Sbjct 1629 CATAATCAATGTATTGCA-AAATAAAATGAAAGCTGCCAATGTTAGAGGTATTTTCCTAG 1687
Query 1691 ATTTGTCTGAAGT-GAAGGGTGAAACAAGCTTAGACCGTGAACACTTCAAAAATATGCGC 1749
| ||||||||||| ||| | ||||| ||||||||||| || ||||||| ||||||| |
Sbjct 1688 ACTTGTCTGAAGTGGAA-GACGAAACGAGCTTAGACCGCGACCACTTCATAAATATGGGA 1746
Query 1750 AATCTCCGGTATCTCAAGTTCTATAATTCTCATTGTCCTCAAGAATGTAAAACCAACAAT 1809
||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct 1747 AATCTCCGGTATCTCAAGTTCTACAATTCCCATTGTCCACAGGAATGTAAAACCAACAAT 1806
Query 1810 AAGATAAACATGCCTGATGGACTTGAGCTACCATTGAAAGAGGTCCGATGCCTTCACTGG 1869
|| || ||||| |||||| |||| |||||||||||||||| || |||||||| ||||||
Sbjct 1807 AAAATCAACATCCCTGATAAACTTAAGCTACCATTGAAAGAAGTTCGATGCCTCCACTGG 1866
Query 1870 CTGAAATTCCCATTGGAGGA-ACTTCCAAACGATTTTGACCCGATTAATCTCGTCGACCT 1928
||||||||||||||||| || ||||||||||||||| |||| |||||||| ||||||||
Sbjct 1867 CTGAAATTCCCATTGGA-GACACTTCCAAACGATTTCAACCCAATTAATCTTGTCGACCT 1925
Query 1929 TAAGCTGACATACAGTGAGATTGAACGACTTTGGGAGGGTGTTAAGGATACACCAGT-CT 1987
||||||| | |||||||| || |||| |||||||||||||| ||||| |||||| | ||
Sbjct 1926 TAAGCTGCCCTACAGTGAAATGGAACAACTTTGGGAGGGTGACAAGGACACACCA-TGCT 1984
Query 1988 TAAAATGGGTTGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAGG 2047
||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1985 TAAGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGGTTATCAAAAG 2044
Query 2048 CTCAAAATCTTCAAAGACTGAACCTTGAAGGCTGCACAA 2086
|| |||| |||||||| ||||||||||||| |||||||
Sbjct 2045 CTGAAAAGCTTCAAAGGTTGAACCTTGAAGGTTGCACAA 2083
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 177239809619
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5