BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg494488

Length=1158
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G44970.1 | Symbols:  | Protein with RNI-like/FBD-like domain...  1393    0.0   
  AT5G44950.1 | Symbols:  | F-box/RNI-like/FBD-like domains-conta...   510    1e-143
  AT5G44980.1 | Symbols:  | F-box/RNI-like/FBD-like domains-conta...   261    1e-68 
  AT5G44960.1 | Symbols:  | F-box/RNI-like/FBD-like domains-conta...   189    5e-47 
  AT5G44940.1 | Symbols:  | F-box/RNI-like superfamily protein | ...   172    5e-42 


> AT5G44970.1 | Symbols:  | Protein with RNI-like/FBD-like domains 
| chr5:18155837-18157340 FORWARD LENGTH=1170
Length=1170

 Score = 1393 bits (754),  Expect = 0.0
 Identities = 1048/1182 (89%), Gaps = 51/1182 (4%)
 Strand=Plus/Plus

Query  1     ATGAGAAACGATATAATCAGCGAACTTCCGGAATCTTTGATAACTCAGATACTTTTATGG  60
             ||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct  1     ATGCGAAACGATATAATCAGCGAACTTCCAGATTCTTTGATAACTCAGATTCTTTTATGG  60

Query  61    CTTCCGACCAAAGATTCTA-TTAAAACAAGTGTTTTATCGACCAGATGGAGAAATCTTTG  119
             ||||| ||||||||||| | |||| ||||||| |||||||||||||||||||||||||||
Sbjct  61    CTTCCAACCAAAGATTC-AGTTAAGACAAGTG-TTTATCGACCAGATGGAGAAATCTTTG  118

Query  120   GCTT-AA--T----GAGTGGATCGCTACAGCGGTTGATAGCGGGATTCAACATCTAGATT  172
             |||| ||  |    |||||||||||  ||||||||||| |||||||||||||| ||||||
Sbjct  119   GCTTGAAGTTCCAGGAGTGGATCGCCGCAGCGGTTGATCGCGGGATTCAACATTTAGATT  178

Query  173   TCGAGACCAAAAATCC-TCT-GC-TTCTCAAAGATTTAATGCCTATGAATATTTATAAGA  229
             |||||||||||||||| |||  | ||||||||||||  ||||||||||| ||||||||||
Sbjct  179   TCGAGACCAAAAATCCTTCTCTCTTTCTCAAAGATTCCATGCCTATGAACATTTATAAGA  238

Query  230   GCAAGACATTGGTGTCTTTAAAGCTTGTATGCGTAGAGCTTGAGAACCCAAAGTTTGTTG  289
             | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  239   GTAAGACATTGGTGTCTTTAAAGCTTGTATGCGTAGAGCTTGAGAATCCAAAGTTTGTTG  298

Query  290   TTTCTCTACCTTGTCTCAAGATCTTGCATCTTGAAAA-AATTTGGTATTGTTATGATGGT  348
             ||||||||||||||||||||||| ||||||| ||||| |||| ||||  ||||||||| |
Sbjct  299   TTTCTCTACCTTGTCTCAAGATCATGCATCTAGAAAATAATT-GGTACGGTTATGATGCT  357

Query  349   CCTTTAGTTGTGGAGAAACTCATCGCAGGGTGTCCTGTTCTTGAAGATCTTACCATGGTA  408
             ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct  358   CCTTTGGTTGTGGAGAAACTCATCGCAGGGTGTCTTGTTCTTGAAGATCTTACCGTGGTA  417

Query  409   AGGATTCATGATGCGGATA-TACAAGCTCTGCCTCTTTTACATGTGAGGTCTCTGACTCT  467
             ||||||||||||  || || ||| || |||||||||| ||||||||| ||||||||| ||
Sbjct  418   AGGATTCATGATATGG-TAATACCAGATCTGCCTCTTCTACATGTGAAGTCTCTGACACT  476

Query  468   GAAGATCTTCCGTTTAATGTTTAATTTGGAGATGA---CTACTAGACCTATTTTGGTGGA  524
             ||||||||| |||||| ||||| ||||||||||||   |||||| |||||||| ||||||
Sbjct  477   GAAGATCTTACGTTTAGTGTTTGATTTGGAGATGATGACTACTATACCTATTTCGGTGGA  536

Query  525   GATTGATGCTCCAAAACTCA-AGTATCTAAGTTTTA-AAGCTAGGCAATCTGATAAAATC  582
             |||||||||||||||||| | ||||| | ||||||| ||  |||||| ||||||| ||||
Sbjct  537   GATTGATGCTCCAAAACT-AGAGTATATGAGTTTTATAAA-TAGGCACTCTGATACAATC  594

Query  583   ATGGTAAAGAATCTGAGTTCATTGTTCAAGATAGACCTTGATACTGATTTTGGCGGCAGT  642
             |||||||||||||||||||||||||||||| || | ||||||||||| ||||||  ||||
Sbjct  595   ATGGTAAAGAATCTGAGTTCATTGTTCAAGTTAAATCTTGATACTGAATTTGGCTACAGT  654

Query  643   TCCTTGGAACCCCATGATTTAAGGAAGAGAAGAGATATTATTCGCGACGTTCTCACTTGT  702
             |||||||||||    ||     | | ||       |||||| || |||||||||||| ||
Sbjct  655   TCCTTGGAACC----GA-----G-A-GA-------TATTATCCGTGACGTTCTCACTGGT  696

Query  703   ATTTCGAGTGTAAGACATATGATCATCTCTCAACGTACTCTAGAGGTCATACATGGTTAT  762
             || |||||||||||||| |||||||||||||||||||||||||||||||||  | |||||
Sbjct  697   ATATCGAGTGTAAGACAGATGATCATCTCTCAACGTACTCTAGAGGTCATATGTCGTTAT  756

Query  763   TCAAAACTCGGACCGATTCCCAAATTCCATCACCTAACGCATTTGAAGGCCGCATTCTCC  822
             ||||||||||| || ||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct  757   TCAAAACTCGGGCCTATTCCCAAATTCCATCACCTATCTCATTTGAAGGCTGCATTCTCC  816

Query  823   AGCACATCGTTACAACTATTGCTCGCCTTTCTTGAGAGCTGCCCAAATCTTAAAAACCTC  882
             |||||||| ||||||||||||| |||||||||||||||||||||||| || ||||| |||
Sbjct  817   AGCACATCATTACAACTATTGCCCGCCTTTCTTGAGAGCTGCCCAAACCTGAAAAAACTC  876

Query  883   ATATTGGACTTATCTGTTTCAACGGAGCCAGAGCGAA-TCGATATTACCAATGTGCCTCG  941
             || |||||||||| ||||||| ||||||||||| ||| ||||| ||||||||||||||||
Sbjct  877   ATCTTGGACTTATATGTTTCAGCGGAGCCAGAG-GAAATCGATCTTACCAATGTGCCTCG  935

Query  942   GTGTATAACAACGACTCTGGAGTGTATTGAGATTAACAAACTGATAAGGAAGGGAGAAAC  1001
             |||||||||| |||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct  936   GTGTATAACATCGACTCTGGAGTGTATTGAGATTAACAAACTGATTAGGAAGGAAGCAAC  995

Query  1002  TGGGATTAAACTAGTTCAGTATTTTCTTGAAAATTCACCAATCCTTAAGAAAGC-CAAGC  1060
             |||| ||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||
Sbjct  996   TGGGGTTAAACTAGTTCATTATTTTCTTGAGAATTCACCAATCCTTAAGAAA-CTCAAGC  1054

Query  1061  TGAGTTTTACAGATTCTCCTATGAGTA-T--GACCAATCTACCGTTAGATCGGGTCT-TC  1116
              |||||| ||||||||||||||||||| |  ||||||||||||||||||||   ||| | 
Sbjct  1055  CGAGTTTCACAGATTCTCCTATGAGTACTATGACCAATCTACCGTTAGATCATCTCTATA  1114

Query  1117  AAGATGTATCTTACATCCAGAAAGCGTTCTCGCAGATGTCAA  1158
             || |||||||||||| ||||||||||||||||||||||||||
Sbjct  1115  AA-ATGTATCTTACAGCCAGAAAGCGTTCTCGCAGATGTCAA  1155


> AT5G44950.1 | Symbols:  | F-box/RNI-like/FBD-like domains-containing 
protein | chr5:18151665-18153164 FORWARD LENGTH=1317
Length=1317

 Score =  510 bits (276),  Expect = 1e-143
 Identities = 770/996 (77%), Gaps = 83/996 (8%)
 Strand=Plus/Plus

Query  129   GTGGATCGCTACAG-CGGTTGATAGCGGGATTCAACATCTAGAT-TT-C-GAGACCAAAA  184
             |||||||||||||| | |||||| |||| ||||| ||||||||| || | |  ||  |  
Sbjct  285   GTGGATCGCTACAGTC-GTTGATCGCGGTATTCAGCATCTAGATGTTACGGCCACTGATT  343

Query  185   ATCCT-C-TGCTTCTCAAAGATTTAATGCCTATGAATATTTATAAGAGCAAGACATTGGT  242
              |||| | ||   | ||  ||||| ||||||   || ||||  ||||||||||| |||||
Sbjct  344   GTCCTCCATG-GAC-CATTGATTTTATGCCTGCCAACATTTGCAAGAGCAAGACGTTGGT  401

Query  243   GTCTTTAAAGCTTGTATGCGTAGAGCTTGAGAAC-CCAAAGTTTGTTGTTTCTCTACCTT  301
             |||||||||||| |||   |||| ||||||  || |||||||||||||||||||||||||
Sbjct  402   GTCTTTAAAGCTCGTAAATGTAGGGCTTGA-CACTCCAAAGTTTGTTGTTTCTCTACCTT  460

Query  302   GTCTCAAGATCTTGCATCTTGAAAAAATTTGGTATTGTTATGATGGTCCTTT-AGTTGTG  360
             |||| |||||| ||||||||||| | ||||  | ||   || | | |||||| | ||| |
Sbjct  461   GTCTTAAGATCATGCATCTTGAAGACATTT--T-TT---AT-A-G-TCCTTTGA-TTGCG  510

Query  361   GAGAAACTCATCGCAGGGTGTCCTGTTCTTGAAGATCTTACCATGGTAAGGATTCATGAT  420
             ||||| |||||| |||| |||||||||||||||||||||||||| ||||||| |||||| 
Sbjct  511   GAGAACCTCATCTCAGGCTGTCCTGTTCTTGAAGATCTTACCATTGTAAGGAATCATGA-  569

Query  421   GCGGATATACAAGCTCTGCCTCTTTTACATGTGAGGTCTCTGACTCTGAAGATCTTCCGT  480
             | | || | |    | |  || || | | ||||| |||||  ||| |||||| |||||||
Sbjct  570   G-G-ATTTTC----T-TAACT-TTCTGCGTGTGATGTCTCAAACTTTGAAGAACTTCCGT  621

Query  481   TTAATGTTTAATTTGGAGA-TGACTACTAGACCTATTTT--GGTGGAGATTGATGCTCCA  537
             ||||  ||| ||| || || ||  || || ||  |||||  ||| ||||||||||| |||
Sbjct  622   TTAACATTTGATTGGG-GAATGGGTAGTA-ACG-ATTTTTCGGTCGAGATTGATGCACCA  678

Query  538   AAACTCAAGTATC-TAAGTTTTAAAGCTAGGCAATCTGATAAAATCA-TGGTAAAGAATC  595
               ||| ||||| | | ||||||| || ||| |||||||||| ||| | | ||||| ||| 
Sbjct  679   GGACTTAAGTA-CATGAGTTTTAGAGATAGTCAATCTGATAGAAT-AGTTGTAAAAAATT  736

Query  596   TGAGTTCATTGTTCAAGATAGACCTTGATACTGA-TTT--T-----G---G-C---GGCA  640
             ||||||| ||| |||||||||||||||||||||| |||  |     |   | |   ||||
Sbjct  737   TGAGTTCCTTGGTCAAGATAGACCTTGATACTGAATTTAATCTCAAGTTTGGCCTCGGCA  796

Query  641   GTTCCTT-GGAACCCCATGATTTAAGGAAGAGAAGAGATATTATTCGCGACGTTCTCACT  699
             || |||| ||||||  | || || |  |||||| ||  |||||| || ||  |||| || 
Sbjct  797   GT-CCTTTGGAACCGGAGGACTTGACTAAGAGA-GA--TATTATCCGAGATTTTCTTACC  852

Query  700   TGTATTTCGAGTGT-AAGACATATGATCATCTCTCAACGTACTCTAGAGGT-CATACATG  757
              ||||||||||||| || |||||||||||||||||| | |||||| ||||| | |  || 
Sbjct  853   GGTATTTCGAGTGTCAA-ACATATGATCATCTCTCATCCTACTCTGGAGGTGCTTT-ATC  910

Query  758   GTTATTC-AAAACTCGGACCGATTCCCAAATTCCATCACCTA-ACGCATTTG-AAGGCCG  814
             ||||||| |||| |||||| | |||| ||||||||| || || |  |||||| ||| | |
Sbjct  911   GTTATTCCAAAA-TCGGACAGCTTCCAAAATTCCATAACTTATAT-CATTTGCAAG-CTG  967

Query  815   CATTCTCCAGCACATCGTTACAACTATTGCTCGCCTTTCTTGAGAGCTGCCCAAATCTTA  874
               ||||||||| ||| |||||||||||||| |||||| || || | |||||||||||| |
Sbjct  968   TGTTCTCCAGCTCATTGTTACAACTATTGCCCGCCTTCCTAGAAATCTGCCCAAATCTAA  1027

Query  875   AAAACCTCATATTGGACTTAT-CTGTTTCAACGGAGCCAGAGCGAATCGA-TATTACCAA  932
             |||||||||| ||||||| || || ||||| | |||||||||| |||||| | |||||||
Sbjct  1028  AAAACCTCATCTTGGACT-ATTCTATTTCAGCAGAGCCAGAGCAAATCGACT-TTACCAA  1085

Query  933   TGTGCCTCGGTGTATAACAACGACTCTGGAGTGTATTGAGATTAA-CAAACTGA-TAAGG  990
             | ||||||||||| |||   |||| |||||||   |||||||||| ||| || | || | 
Sbjct  1086  TCTGCCTCGGTGTTTAATTTCGACGCTGGAGTACGTTGAGATTAAACAA-CTTACTATG-  1143

Query  991   AAGGGAG-AAACTGGGATTAAACTAGTTCAGTATTTTCTTGAAAATTCACCAATCCTTAA  1049
             | ||||| ||| |||||||||| | ||  | || |||||||| |||||| || |||| ||
Sbjct  1144  A-GGGAGGAAAGTGGGATTAAATTGGTGAAATACTTTCTTGAGAATTCAGCAGTCCTCAA  1202

Query  1050  GAAAGCCAAG-CTGAGTTTTACAGATTCTCCTATGA  1084
             |||| |  |  |||||||| | ||||||||| ||||
Sbjct  1203  GAAA-CTGACTCTGAGTTTCATAGATTCTCCCATGA  1237


> AT5G44980.1 | Symbols:  | F-box/RNI-like/FBD-like domains-containing 
protein | chr5:18160290-18162264 FORWARD LENGTH=1592
Length=1592

 Score =  261 bits (141),  Expect = 1e-68
 Identities = 638/867 (74%), Gaps = 78/867 (9%)
 Strand=Plus/Plus

Query  220   ATTTATAAGAGCAAGACATTGGTGTCTTTAAAGCTTGTAT-GCGTAGAGCTT-GAGAACC  277
             ||||| ||||||||||||||||| ||||| ||||||  ||  ||||||| ||  ||||  
Sbjct  457   ATTTACAAGAGCAAGACATTGGTCTCTTTGAAGCTT-CATAACGTAGAG-TTAAAGAATT  514

Query  278   CAAAGTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGCATCTTGAAAAAATTTGGT-AT  336
             || | ||||||||||||||||||||||||||||||||| | || || || ||||| | | 
Sbjct  515   CAGACTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGAAACTGGAGAATATTTG-TCAC  573

Query  337   TGTTATGATGGTCCTTTAGTTGTGGAGAAACTCATCGCAGGGTGTCCTGTTCTTGAAGAT  396
              || | ||||||||||| ||||||||||| |||||| |||| ||| ||||||||||||||
Sbjct  574   GGTGAGGATGGTCCTTTGGTTGTGGAGAAGCTCATCTCAGGATGTTCTGTTCTTGAAGAT  633

Query  397   CTT-ACCATGGTAAGGA-TTCATGATGC--GGATATACAA-GCTCTGCCT-CTTTTACAT  450
             ||| | | || | |||  ||  ||||    ||| | | || | ||| | | ||| | | |
Sbjct  634   CTTGAGC-TGATTAGGCCTTT-TGATATTAGGACACATAAAGTTCTTC-TGCTTCTGCGT  690

Query  451   GTGAGGTCTCTGACTCTGAAGATCTT--CCGTTTA-ATGTTTA--ATTTGGAGATGA-C-  503
             ||||| |||| ||||||||| | |||  || || | || |||   || |  | | || | 
Sbjct  691   GTGAGCTCTCAGACTCTGAAAAGCTTTACC-TT-ACAT-TTTGCGATCTATA-AGGATCG  746

Query  504   TACTAGACCTATTTTG-GTGGAGATTGATGCTCCAAAACTCAAGTATCTAAGTTTTAAAG  562
             ||| |||  | ||||  || |||||||||||||||| |||||||||| | | | || || 
Sbjct  747   TAC-AGA--T-TTTTCAGTTGAGATTGATGCTCCAAGACTCAAGTATATGACTGTTGAA-  801

Query  563   CTAG-G-CAATCTGATAAAATCATGGTAAAGAATCTGAGTTCATTGTTCAAG-ATAGACC  619
             | || | ||||||||||  ||  |||||||||| |||||||| ||||||| | || ||| 
Sbjct  802   C-AGAGTCAATCTGATAGCATTGTGGTAAAGAACCTGAGTTCCTTGTTCA-GCATCGACA  859

Query  620   TTGATACTGATTTTGGCGGCAGTTCCTTGGA-ACCCCATGATTTAAGGAAGAGAAGAGAT  678
             ||| |||| | |||      | | |||| || ||   | ||| |||||| | | | |  |
Sbjct  860   TTGGTACTAAATTTA-----A-T-CCTTTGAGACATGAGGATCTAAGGATGCGTA-A--T  909

Query  679   ATTATTCG-CGACGTTCTCACTTGTATTTCGAGTGTAAGACATATGATCATCTCTCAACG  737
              || |||  |||  || | ||  | || || ||||||| |||||||||||||| |    |
Sbjct  910   GTT-TTCTACGATTTTTTAACCGGGATATCTAGTGTAAAACATATGATCATCTGTTTGTG  968

Query  738   TACTCT--AGAGGTCATACATGGTTATTCAAAACTCGGACCGATTCCCAAATTCCATCAC  795
              | |||  ||||||  | | |  ||||||||||| ||||| |||||||||||||||  ||
Sbjct  969   GAGTCTCCAGAGGTTTT-C-TCCTTATTCAAAACCCGGACTGATTCCCAAATTCCAGAAC  1026

Query  796   CTA-ACGCATTTGAAGGC-C-GCATTCTCCAGCACATCGTTACAACT-ATTGCTCGCCTT  851
              |  |  ||||| || || | | ||  |  ||| ||||   ||| || ||||   || ||
Sbjct  1027  TTGTAT-CATTTAAAAGCACAG-ATG-TGGAGCTCATCAACACA-CTTATTGGAAGCGTT  1082

Query  852   TCTTGAGAGCTGCCCAAATCTTAAAAACCTCATATTGGACT-TATCTGTTTCAAC-GGAG  909
             ||||||||||||||||||||| ||||||||||| ||||| | ||  ||||  ||  ||| 
Sbjct  1083  TCTTGAGAGCTGCCCAAATCTGAAAAACCTCATCTTGGAATATAA-TGTTG-AATTGGAT  1140

Query  910   CCAGAGCGAA-TCGA-TATTACCAATGTGCCTCGGTGTATAACAACGACTCTGGAGTGTA  967
             | ||||| || | || | ||||||| |||||||  ||| ||| | |||| ||||||| | 
Sbjct  1141  CGAGAGC-AAGTGGACT-TTACCAACGTGCCTCAATGTTTAATATCGACGCTGGAGTATG  1198

Query  968   TTGAGATTAACA-AACTGATAAGGAAGGGAGAAACTGGGATTAAACTAGTTCAGTATTTT  1026
             |||||||||| | ||| || | | | |  | ||| |  ||||||||||||  | || |||
Sbjct  1199  TTGAGATTAA-AGAACCGA-ATG-A-G--A-AAAGTACGATTAAACTAGTGAACTACTTT  1251

Query  1027  CTTGAAAATTCACCAATCCTTAAGAAA  1053
             ||||| |||||| || |||| ||||||
Sbjct  1252  CTTGAGAATTCAGCAGTCCTCAAGAAA  1278


> AT5G44960.1 | Symbols:  | F-box/RNI-like/FBD-like domains-containing 
protein | chr5:18153852-18155391 FORWARD LENGTH=1251
Length=1251

 Score =  189 bits (102),  Expect = 5e-47
 Identities = 157/183 (86%), Gaps = 6/183 (3%)
 Strand=Plus/Plus

Query  220  ATTTATAAGAGCAAGACATTGGTGTCTTTAAAGCTTGTAT-GCGTAGAGCTTG-AGAACC  277
            ||||| ||||||||||||||||| ||||| |||||| |||  ||||||| ||| |||| |
Sbjct  382  ATTTACAAGAGCAAGACATTGGTCTCTTTGAAGCTT-TATAACGTAGAG-TTGAAGAATC  439

Query  278  CAAAGTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGCATCTTGAA-AAAATTTGGTAT  336
            || | ||||||||||||||||||||||||||||||||| | || ||  |||||||| || 
Sbjct  440  CAGACTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGAAACT-GATGAAAATTTGTTAC  498

Query  337  TGTTATGATGGTCCTTTAGTTGTGGAGAAACTCATCGCAGGGTGTCCTGTTCTTGAAGAT  396
             || | ||||| ||||| ||||||||||| |||||| |||| ||||||||||||||||||
Sbjct  499  GGTGAGGATGGCCCTTTGGTTGTGGAGAAGCTCATCTCAGGATGTCCTGTTCTTGAAGAT  558

Query  397  CTT  399
            |||
Sbjct  559  CTT  561


> AT5G44940.1 | Symbols:  | F-box/RNI-like superfamily protein 
| chr5:18149369-18150892 FORWARD LENGTH=1134
Length=1134

 Score =  172 bits (93),  Expect = 5e-42
 Identities = 154/183 (84%), Gaps = 6/183 (3%)
 Strand=Plus/Plus

Query  220  ATTTATAAGAGCAAGACATTGGTGTCTTTAAAGCTTGTAT-GCGTAGAGCTT-GAGAACC  277
            ||||| ||||| ||||||||||| ||||| |||||| |||  ||||||| ||  |||| |
Sbjct  388  ATTTACAAGAGTAAGACATTGGTCTCTTTGAAGCTT-TATAACGTAGAG-TTAAAGAATC  445

Query  278  CAAAGTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGCATCTTGAAAAAATTTGGT-AT  336
            || ||||||||||||||||||||||||||||||||||| | || || || ||||  | | 
Sbjct  446  CAGAGTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGAAACTGGAGAATATTTT-TCAC  504

Query  337  TGTTATGATGGTCCTTTAGTTGTGGAGAAACTCATCGCAGGGTGTCCTGTTCTTGAAGAT  396
             || | ||||||||||| || |||||||| |||||| |||| ||||||||||||||||||
Sbjct  505  GGTGAGGATGGTCCTTTGGTCGTGGAGAAGCTCATCTCAGGATGTCCTGTTCTTGAAGAT  564

Query  397  CTT  399
            |||
Sbjct  565  CTT  567



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 56827016940


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5