BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494551 Length=1196 Score E Sequences producing significant alignments: (Bits) Value AT5G44350.1 | Symbols: | ethylene-responsive nuclear protein -... 1447 0.0 > AT5G44350.1 | Symbols: | ethylene-responsive nuclear protein -related | chr5:17864520-17865707 FORWARD LENGTH=1188 Length=1188 Score = 1447 bits (783), Expect = 0.0 Identities = 1082/1218 (89%), Gaps = 54/1218 (4%) Strand=Plus/Plus Query 1 AGAAACTTCATCAATCTCTCTTCTAACAAAAACCCTAACCCTAATTCTCTCAAGACAACT 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 AGAAACTTCATCAATCTCTCTTCCAACAAAAACCCTAACCCTAATTCTCTCAAGACAACT 60 Query 61 CAAAGGTCTCTCATTTTTTGGGTTT-T-ATCTCTTCCGTACAATCGCCATGTCT-CT--A 115 |||||||||||| |||||| ||||| | ||| |||||||| ||||||||||||| || | Sbjct 61 CAAAGGTCTCTCCTTTTTTAGGTTTATTATCACTTCCGTATAATCGCCATGTCTTCTCTA 120 Query 116 CCATGGAAAAAACCTAAATCAAGTCGAATCTTAAGATTCATGTCGGAGTTTCAACAATCT 175 |||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| Sbjct 121 CCATGGAAAAAACCAAAATCGAGTCGAATCTTAAGATTCATTTCTGAGTTTCAACAATCA 180 Query 176 CCGTTCGTTGAAACTGGCTTCCCAACTTCTTTAATCGATCTCTTCTTCAAAAATCGCGAT 235 |||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||| Sbjct 181 CCGTTCGTTGAAACTGGCTTTCCAACTTCTCTGATCGATCTCTTCTTCAAGAATCGCGAT 240 Query 236 CGTCTCAAAAAATCTCCGTCTAAACGCTTCAAACGAATCGAACGCCAGATTCAAACCGCT 295 ||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| Sbjct 241 CGTCTAAAAAAATCTCCATCTAAACGCTTCCAACGAATCGAACGCCAGATTCGAACCGCT 300 Query 296 CCAAACGCTTCTTCTTTGACTAATCAAGATGCGGTTTTGGAAAAGCCCACGGGGATTAAA 355 |||||||||||||| |||| |||||||||| || |||| ||||||||| || |||||||| Sbjct 301 CCAAACGCTTCTTCGTTGAGTAATCAAGATACGATTTTTGAAAAGCCCTCGAGGATTAAA 360 Query 356 ACCGTTCGGAGTAAGATCGAGAAAGTTAATTGCGTTAAAGGTAAATCAGCGGCGGAGAAG 415 |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 361 ACCGTTCGAAGTAAGGTCGAGAAAGTTAATTGCGTTAAAGGTAAATCAGCGGCGTTGAAG 420 Query 416 AAGCACGCGATTAAAAATAGCGTTTGCGTTTGTGGCGGTGGCGGCGAGGTCGTTTTGATG 475 ||| ||||||||||||||||||||| || | |||| |||| ||||||||||||||| Sbjct 421 AAGAACGCGATTAAAAATAGCGTTTTCG---G---CGGTAGCGGTGAGGTCGTTTTGATG 474 Query 476 GCGTTTAAGGTTTTAATAGTGGCGTTGCTTGCCTTGAGCACGAAGAAGAAGCTTACTATA 535 |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||| || Sbjct 475 GCGTTTAAGGTTTTGATAGTAGCGTTGCTCGCCTTGAGCACGAAGAAGAAGCTCACTTTA 534 Query 536 GGAATCACTCTCTCCGCCTTCGCTCTTCTCTTAACAGAGCTCGTGGCGGCGCGTGTGTTC 595 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 535 GGAATCACTCTCTCTGCCTTCGCTCTTCTCTTAACAGAGCTCGTGGCGGCGCGTGTTTTC 594 Query 596 ACGCGCTCTAAGCTCTTTAACACCGGCAAAGACAAAAACGCGATTTCCCGCGAAAAAATA 655 ||||||||||| | ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct 595 ACGCGCTCTAA--T----AACACCGACAAAGACAAAAACGCGATTGCCCGCGAGAAAAT- 647 Query 656 ATCGAAACTTTTGATGAAACTCGAGTTCCT---G--ATG---TG-C---AGGAAACAGAG 703 ||||||||||||||||||||||||||| | || || | ||||||||||| Sbjct 648 --CGAAACTTTTGATGAAACTCGAGTTCCCAAAGCGATTCCATGTCCTGAGGAAACAGAG 705 Query 704 CATGTAGTAGCTGAAACAGAGGTTTCGAAGTTGAAAGGTTTAACGATTCGTGATCTGTTG 763 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 706 CATGTAGTATCTGAAACAGAGGTTTCGAAGTTGAAAGGTTTAACGATACGTGATCTGTTG 765 Query 764 TTAAAGGACGAGAAATCAACAAGTAAAAGTTGGAGACTAAAATCGAAGATTGTGAAGAAG 823 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 TCAAAGGACGAGAAATCAACAAGTAAAAGTTGGAGACTAAAATCGAAGATTGTGAAGAAG 825 Query 824 TTAAGGAGTTACAATAATAAGAAGACGAAGAAGACAATGATGATCAAAGAAGAGTCTTTG 883 || |||||||||||||| ||| || |||||||| |||| ||||||||||||||||||| Sbjct 826 TTGAGGAGTTACAATAAGAAG--GAT-AAGAAGACGATGAAGATCAAAGAAGAGTCTTTG 882 Query 884 ATTGAAGTCTCGAGTTTGGTTTTAGAAGATAAACCAAATAAAGTTGACTCCGAGAGAGAC 943 |||||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||| Sbjct 883 ATTGAAGTCTCGAGTTTGGTTTTAGAAGATAAACCAAAGAAAATTGAGTCTGAGAGAGAC 942 Query 944 CAAGAA-A--CGTTAAATCCTCCATTGAT-GAGAACAAATGGTGATAAAATGAATGTGAT 999 ||||| | |||| ||||||||| || | | || |||| ||| | || | ||| Sbjct 943 GAAGAAGAAACGTTGAATCCTCCAGTGGTTG-GATCAAACC-TGA-A---TG---G-GAT 992 Query 1000 TGTTCTGATCGTGATAGTGCTTACTGGTTTGTTATGTGGAAAGATCTTAGCCATTGTTTT 1059 ||||||||||||||| ||||| || |||||||||||||| ||| ||||||| |||||| | Sbjct 993 TGTTCTGATCGTGATTGTGCTAACCGGTTTGTTATGTGGGAAGGTCTTAGCTATTGTTCT 1052 Query 1060 AACACTATCCTGTTTGGTTCTTAGATTTGGAGAAGTCaaaaaaaTATAATCTTTGCatat 1119 |||||||| ||||||||||||||||| |||| |||||||||| | |||||||||||||| Sbjct 1053 GACACTATCATGTTTGGTTCTTAGATTAGGAGCAGTCAAAAAAGT-TAATCTTTGCATAT 1111 Query 1120 aaatttttt-gtatatttttaaacatgtttgcatatgaaactgtaattttttcttatttt 1178 || |||||| |||| ||||||| |||| |||||| ||||||||||| ||||||| ||| Sbjct 1112 AATTTTTTTTGTAT-TTTTTAA-CATGCTTGCATGTGAAACTGTAAATTTTTCTCATTC- 1168 Query 1179 atatGAAGGAGATTGGAT 1196 |||||||||||||||||| Sbjct 1169 ATATGAAGGAGATTGGAT 1186 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58734637650 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5